RchiOBHm_Chr1g0314821

Cytochrome p450

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
Physical Location & Seq
Forward (+)
2127994 .. 2129987
1994 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1509 bp
ATGACTGATTTACAGTACTACCTCCTCTGCTCCGTCCTCTGTTTTCTCTCCACCATCTTCATCAAATCCTTGTTCACCAAACCATCCACAAACAACCCTCCAAGCCCGCCGGCTCTACCAGTCATCGGTCACCTCCACCTCCTCACTTCCTCCTTATCCCAATCATTACACAAACTCTCCACCAAGTACGGCCCTCTCCTCCTCGTCCGGTTCGGCGCCTCTCGGATGCTCGTAGTTTCATCTGCCTCCATGGCCGCCGAAATCTTCAAAACACATGACCTCACTTTTGCTTCTCGACCCTCCTTTGCTTTTGCAGACGACTTGCCCTACAAAAACTTGGGTTTCTTTGCCACCCCATATGGTGACTACTGGAGGTTCATGAAGAAGCTCTGCATGACGGAACTGCTCTCTCCCAAGCAGATTGAACGGTCACGTTCCATCCGGCAGGAAGAGATTGCAAGGTTCTTGAAGAAGATGATGGAGTGTGCTGAGAGAAAACAGAGGGTTGATGTGGGTGCTGAGCTTATGAGGCTCACAAACAACAAGAATGGTGATGAAGCTGAGAAAATCAGGGAGTTGGTGAAGGAATCATTTGAACTGGCCGCAAAGGTATGTTTTGGGGATGTGTTGGGTCCGCTGAAGAGAGTGGGATTCTGGGTTTATGGAAAGCAGCTCATAGATGTGACCATGGGGTATGATAGGCTTTTAGAGGGGATGCTGAAGCAGCATGAAGAGAGAGCAGAGAGAGAGGGCTGGGATAGAGAAGACAAGGATTTGATGGATATTCTATTGAAGGCATATCAGGATGATCAAGCTGAGGTTCAGATCACCAGAACTCATGTCAAGGCTTTCTTGCTTGATCTTTTCATTGGAGGCACTGCTACCACAGCAGAGGCCATGCAATGGGGAGTAGCTGAGCTCATAAACCATCCAGACATATTCAACAAGGTCAGGGAGGAGATGAAAACAGTTGTTGGTAGCAGACTAGTTGAGGAATCAGATGTTGCAAACCTCCCTTACTTGCAGGCAGTGATAAAAGAAACACTGAGACTACACCCACCAGTTCCTTTGTCGACAAGAGAAAGCCGCGAAACTTGTAAAATAAAAGAGTTTGATATACCAGAAAAGACTTCGGTGGCAATCAACCAGTATGCAATAATGAGAGATCCAGAGTTATGGGACAATCCAGATGAGTTTAGGCCAGAGAGGTTCTTGGTTTCCACTAAAGAGAAATATGAATCAGAACTTGATCAGAATGAAAGTAGAGGACATAACTTTCAATATGTCCCGTTTGGATCGGGAAGGAGAAGGTGCCCAGGTTCAAATTTGGCAACCATCTTGTTGAATACTTCAATTGCTGCCATGGTTCAATGCATTGATTGGAAAATTGGAGATGGAAATGAGGGTAGGGTCAATATGGAAGTTGGAGCGGGCATGTCTTTGCCCATGGCTCACCCACTTGTAGTTTTGCCTGTTGATCACTTCAACCCATTTGCTTCTTCAATATAA

Protein Analysis

502

Amino Acids

57.04

Weight (kDa)

6.18

Isoelectric Point (pI)

39.74

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 33 - 468 9.5e-88 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 215, 1311
AccB7I CCANNNNNTGG 1 cut(s) 903
AccBSI CCGCTC 1 cut(s) 1430
AccI GTMKAC 1 cut(s) 1073
AccII CGCG 1 cut(s) 1089
AciI CCGC 6 cut(s) 107, 255, 603, 635, 1087, 1430
AclWI GGATC 2 cut(s) 1160, 1303
AcoI YGGCCR 2 cut(s) 252, 600
AcsI RAATTY 1 cut(s) 1324
AcuI CTGAAG 2 cut(s) 659, 740
AcyI GRCGYC 1 cut(s) 216
AfaI GTAC 2 cut(s) 17, 188
AfiI CCNNNNNNNGG 2 cut(s) 125, 903
AhlI ACTAGT 1 cut(s) 985
AjnI CCWGG 1 cut(s) 1315
AluBI AGCT 7 cut(s) 388, 523, 560, 673, 815, 914, 919
AluI AGCT 7 cut(s) 388, 523, 560, 673, 815, 914, 919
Alw21I GWGCWC 1 cut(s) 921
Alw26I GTCTC 1 cut(s) 1042
AlwI GGATC 2 cut(s) 1160, 1303
AoxI GGCC 5 cut(s) 190, 252, 600, 894, 1199
ApeKI GCWGC 3 cut(s) 670, 724, 1358
ApoI RAATTY 1 cut(s) 1324
ArsI GACNNNNNNTTYG 2 cut(s) 269, 301
AspLEI GCGC 1 cut(s) 218
AspS9I GGNCC 2 cut(s) 191, 632
AsuHPI GGTGA 7 cut(s) 67, 122, 374, 563, 592, 820, 1445
AvaII GGWCC 1 cut(s) 632
BaeGI GKGCMC 1 cut(s) 1316
BanI GGYRCC 2 cut(s) 215, 1311
BanII GRGCYC 1 cut(s) 921
BbsI GAAGAC 1 cut(s) 771
Bbv12I GWGCWC 1 cut(s) 921
BbvCI CCTCAGC 1 cut(s) 816
BbvI GCAGC 3 cut(s) 682, 736, 1345
BccI CCATC 8 cut(s) 62, 91, 446, 472, 772, 936, 1343, 1388
BceAI ACGGC 1 cut(s) 205
BciT130I CCWGG 1 cut(s) 1317
BclI TGATCA 3 cut(s) 808, 1249, 1477
BcoDI GTCTC 1 cut(s) 1042
BcuI ACTAGT 1 cut(s) 985
BfaI CTAG 1 cut(s) 986
BfoI RGCGCY 1 cut(s) 219
BglI GCCNNNNNGGC 1 cut(s) 251
BisI GCNGC 6 cut(s) 255, 603, 671, 725, 1087, 1359
BlpI GCTNAGC 2 cut(s) 519, 915
BlsI GCNGC 6 cut(s) 256, 604, 672, 726, 1088, 1360
BmcAI AGTACT 1 cut(s) 17
Bme1390I CCNGG 1 cut(s) 1317
Bme18I GGWCC 1 cut(s) 632
BmgT120I GGNCC 2 cut(s) 191, 632
BmiI GGNNCC 3 cut(s) 217, 633, 1313
BmrFI CCNGG 1 cut(s) 1317
BmsI GCATC 2 cut(s) 216, 705
BpiI GAAGAC 1 cut(s) 771
BpmI CTGGAG 1 cut(s) 391
Bpu10I CCTNAGC 1 cut(s) 816
Bpu1102I GCTNAGC 2 cut(s) 519, 915
BsaHI GRCGYC 1 cut(s) 216
BsaJI CCNNGG 5 cut(s) 249, 687, 1315, 1362, 1446
BsaWI WCCGGW 1 cut(s) 207
BsaXI ACNNNNNCTCC 2 cut(s) 161, 191
Bsc4I CCNNNNNNNGG 2 cut(s) 125, 903
Bse118I RCCGGY 1 cut(s) 109
Bse1I ACTGG 5 cut(s) 119, 374, 603, 1061, 1147
Bse3DI GCAATG 1 cut(s) 908
BseBI CCWGG 1 cut(s) 1317
BseDI CCNNGG 5 cut(s) 249, 687, 1315, 1362, 1446
BseGI GGATG 7 cut(s) 83, 231, 438, 628, 720, 811, 928
BseLI CCNNNNNNNGG 2 cut(s) 125, 903
BseMI GCAATG 1 cut(s) 908
BseMII CTCAG 6 cut(s) 480, 510, 552, 807, 906, 1037
BseNI ACTGG 5 cut(s) 119, 374, 603, 1061, 1147
BseRI GAGGAG 5 cut(s) 14, 131, 188, 191, 971
BseSI GKGCMC 1 cut(s) 1316
BseXI GCAGC 3 cut(s) 682, 736, 1345
BseYI CCCAGC 1 cut(s) 753
Bsh1236I CGCG 1 cut(s) 1089
BshFI GGCC 5 cut(s) 192, 254, 602, 896, 1201
BshNI GGYRCC 2 cut(s) 215, 1311
BsiHKAI GWGCWC 1 cut(s) 921
BsiSI CCGG 3 cut(s) 110, 208, 442
BslFI GGGAC 2 cut(s) 1193, 1271
BslI CCNNNNNNNGG 2 cut(s) 125, 903
BsmAI GTCTC 1 cut(s) 1042
BsmFI GGGAC 2 cut(s) 1193, 1271
BsnI GGCC 5 cut(s) 192, 254, 602, 896, 1201
Bsp1286I GDGCHC 2 cut(s) 921, 1316
Bsp143I GATC 7 cut(s) 808, 825, 859, 1165, 1249, 1295, 1477
Bsp1720I GCTNAGC 2 cut(s) 519, 915
Bsp19I CCATGG 4 cut(s) 249, 687, 1362, 1446
BspACI CCGC 6 cut(s) 107, 255, 603, 635, 1087, 1430
BspANI GGCC 5 cut(s) 192, 254, 602, 896, 1201
BspCNI CTCAG 6 cut(s) 481, 511, 553, 808, 907, 1038
BspFNI CGCG 1 cut(s) 1089
BspHI TCATGA 1 cut(s) 378
BspLI GGNNCC 3 cut(s) 217, 633, 1313
BspPI GGATC 2 cut(s) 1160, 1303
BspT107I GGYRCC 2 cut(s) 215, 1311
BsrBI CCGCTC 1 cut(s) 1430
BsrDI GCAATG 1 cut(s) 908
BsrFI RCCGGY 1 cut(s) 109
BsrI ACTGG 5 cut(s) 119, 374, 603, 1061, 1147
BssAI RCCGGY 1 cut(s) 109
BssECI CCNNGG 5 cut(s) 249, 687, 1315, 1362, 1446
BssMI GATC 7 cut(s) 808, 825, 859, 1165, 1249, 1295, 1477
BssNI GRCGYC 1 cut(s) 216
BssT1I CCWWGG 4 cut(s) 249, 687, 1362, 1446
Bst2UI CCWGG 1 cut(s) 1317
Bst4CI ACNGT 3 cut(s) 15, 429, 970
Bst6I CTCTTC 3 cut(s) 444, 635, 726
BstACI GRCGYC 1 cut(s) 216
BstC8I GCNNGC 4 cut(s) 107, 111, 1026, 1432
BstDEI CTNAG 6 cut(s) 489, 519, 561, 816, 915, 1046
BstDSI CCRYGG 4 cut(s) 249, 687, 1362, 1446
BstEII GGTNACC 1 cut(s) 128
BstF5I GGATG 7 cut(s) 83, 231, 438, 628, 720, 811, 928
BstFNI CGCG 1 cut(s) 1089
BstH2I RGCGCY 1 cut(s) 219
BstHHI GCGC 1 cut(s) 218
BstKTI GATC 7 cut(s) 811, 828, 862, 1168, 1252, 1298, 1480
BstMAI GTCTC 1 cut(s) 1042
BstMBI GATC 7 cut(s) 808, 825, 859, 1165, 1249, 1295, 1477
BstMWI GCNNNNNNNGC 4 cut(s) 251, 529, 724, 887
BstNI CCWGG 1 cut(s) 1317
BstNSI RCATGY 1 cut(s) 1438
BstPI GGTNACC 1 cut(s) 128
BstSCI CCNGG 1 cut(s) 1315
BstSLI GKGCMC 1 cut(s) 1316
BstUI CGCG 1 cut(s) 1089
BstV1I GCAGC 3 cut(s) 682, 736, 1345
BstV2I GAAGAC 1 cut(s) 771
BstX2I RGATCY 1 cut(s) 1165
BstXI CCANNNNNNTGG 1 cut(s) 1176
BstYI RGATCY 1 cut(s) 1165
BsuRI GGCC 5 cut(s) 192, 254, 602, 896, 1201
BtgI CCRYGG 4 cut(s) 249, 687, 1362, 1446
BtsCI GGATG 7 cut(s) 83, 231, 438, 628, 720, 811, 928
BtsI GCAGTG 2 cut(s) 876, 1035
BtsIMutI CAGTG 3 cut(s) 876, 1035, 1043
Cac8I GCNNGC 4 cut(s) 107, 111, 1026, 1432
CciI TCATGA 1 cut(s) 378
CfoI GCGC 1 cut(s) 218
Cfr10I RCCGGY 1 cut(s) 109
Cfr13I GGNCC 2 cut(s) 191, 632
Csp6I GTAC 2 cut(s) 16, 187
CviQI GTAC 2 cut(s) 16, 187
DdeI CTNAG 6 cut(s) 489, 519, 561, 816, 915, 1046
DinI GGCGCC 1 cut(s) 217
DpnI GATC 7 cut(s) 810, 827, 861, 1167, 1251, 1297, 1479
DpnII GATC 7 cut(s) 808, 825, 859, 1165, 1249, 1295, 1477
EaeI YGGCCR 2 cut(s) 252, 600
Eam1104I CTCTTC 3 cut(s) 444, 635, 726
EarI CTCTTC 3 cut(s) 444, 635, 726
Ecl136II GAGCTC 1 cut(s) 919
Eco130I CCWWGG 4 cut(s) 249, 687, 1362, 1446
Eco24I GRGCYC 1 cut(s) 921
Eco47I GGWCC 1 cut(s) 632
Eco53kI GAGCTC 1 cut(s) 919
Eco57I CTGAAG 2 cut(s) 659, 740
Eco91I GGTNACC 1 cut(s) 128
EcoICRI GAGCTC 1 cut(s) 919
EcoO65I GGTNACC 1 cut(s) 128
EcoRII CCWGG 1 cut(s) 1315
EcoT14I CCWWGG 4 cut(s) 249, 687, 1362, 1446
EcoT22I ATGCAT 1 cut(s) 1376
EcoT38I GRGCYC 1 cut(s) 921
EgeI GGCGCC 1 cut(s) 217
EheI GGCGCC 1 cut(s) 217
ErhI CCWWGG 4 cut(s) 249, 687, 1362, 1446
FalI AAGNNNNNCTT 2 cut(s) 836, 868
FaqI GGGAC 2 cut(s) 1193, 1271
FauI CCCGC 2 cut(s) 114, 1423
FauNDI CATATG 1 cut(s) 358
FbaI TGATCA 3 cut(s) 808, 1249, 1477
FblI GTMKAC 1 cut(s) 1073
Fnu4HI GCNGC 6 cut(s) 255, 603, 671, 725, 1087, 1359
FokI GGATG 7 cut(s) 70, 238, 425, 635, 727, 818, 915
FriOI GRGCYC 1 cut(s) 921
Fsp4HI GCNGC 6 cut(s) 255, 603, 671, 725, 1087, 1359
FspBI CTAG 1 cut(s) 986
GlaI GCGC 1 cut(s) 217
GluI GCNGC 6 cut(s) 255, 603, 671, 725, 1087, 1359
GsaI CCCAGC 1 cut(s) 757
GsuI CTGGAG 1 cut(s) 391
HaeII RGCGCY 1 cut(s) 219
HaeIII GGCC 5 cut(s) 192, 254, 602, 896, 1201
HapII CCGG 3 cut(s) 110, 208, 442
HhaI GCGC 1 cut(s) 218
Hin1I GRCGYC 1 cut(s) 216
Hin6I GCGC 1 cut(s) 216
HinP1I GCGC 1 cut(s) 216
HincII GTYRAC 1 cut(s) 1074
HindII GTYRAC 1 cut(s) 1074
HinfI GANTC 4 cut(s) 587, 651, 995, 1238
HpaII CCGG 3 cut(s) 110, 208, 442
HphI GGTGA 7 cut(s) 67, 122, 374, 563, 592, 820, 1445
Hpy166II GTNNAC 2 cut(s) 75, 1074
Hpy188I TCNGA 5 cut(s) 225, 825, 1000, 1243, 1254
Hpy188III TCNNGA 8 cut(s) 294, 379, 466, 803, 932, 1169, 1187, 1299
Hpy8I GTNNAC 2 cut(s) 75, 1074
HpyAV CCTTC 4 cut(s) 577, 787, 1296, 1302
HpyCH4III ACNGT 3 cut(s) 15, 429, 970
HpyCH4IV ACGT 1 cut(s) 433
HpyCH4V TGCA 8 cut(s) 314, 393, 458, 901, 1007, 1024, 1154, 1374
HpyF10VI GCNNNNNNNGC 4 cut(s) 251, 529, 724, 887
HpyF3I CTNAG 6 cut(s) 489, 519, 561, 816, 915, 1046
HpySE526I ACGT 1 cut(s) 433
Hsp92I GRCGYC 1 cut(s) 216
HspAI GCGC 1 cut(s) 216
KasI GGCGCC 1 cut(s) 215
KroI GCCGGC 1 cut(s) 109
KroNI GCCGGC 1 cut(s) 111
Ksp22I TGATCA 3 cut(s) 808, 1249, 1477
Kzo9I GATC 7 cut(s) 808, 825, 859, 1165, 1249, 1295, 1477
LmnI GCTCC 2 cut(s) 35, 1427
Lsp1109I GCAGC 3 cut(s) 682, 736, 1345
LweI GCATC 2 cut(s) 216, 705
MaeI CTAG 1 cut(s) 986
MaeII ACGT 1 cut(s) 433
MaeIII GTNAC 4 cut(s) 128, 362, 429, 682
MalI GATC 7 cut(s) 810, 827, 861, 1167, 1251, 1297, 1479
MbiI CCGCTC 1 cut(s) 1430
MboI GATC 7 cut(s) 808, 825, 859, 1165, 1249, 1295, 1477
MfeI CAATTG 1 cut(s) 1353
MflI RGATCY 1 cut(s) 1165
MhlI GDGCHC 2 cut(s) 921, 1316
MluCI AATT 3 cut(s) 1324, 1353, 1386
Mly113I GGCGCC 1 cut(s) 216
MmeI TCCRAC 1 cut(s) 1405
Mph1103I ATGCAT 1 cut(s) 1376
MroNI GCCGGC 1 cut(s) 109
MslI CAYNNNNRTG 1 cut(s) 680
MspA1I CMGCKG 1 cut(s) 637
MspI CCGG 3 cut(s) 110, 208, 442
MspR9I CCNGG 1 cut(s) 1317
MunI CAATTG 1 cut(s) 1353
MvaI CCWGG 1 cut(s) 1317
MvnI CGCG 1 cut(s) 1089
MwoI GCNNNNNNNGC 4 cut(s) 251, 529, 724, 887
NaeI GCCGGC 1 cut(s) 111
NarI GGCGCC 1 cut(s) 216
NcoI CCATGG 4 cut(s) 249, 687, 1362, 1446
NdeI CATATG 1 cut(s) 358
NdeII GATC 7 cut(s) 808, 825, 859, 1165, 1249, 1295, 1477
NgoMIV GCCGGC 1 cut(s) 109
NlaIV GGNNCC 3 cut(s) 217, 633, 1313
NmuCI GTSAC 4 cut(s) 128, 362, 429, 682
NsiI ATGCAT 1 cut(s) 1376
NspI RCATGY 1 cut(s) 1438
PagI TCATGA 1 cut(s) 378
PdiI GCCGGC 1 cut(s) 111
PfeI GAWTC 4 cut(s) 587, 651, 995, 1238
PflMI CCANNNNNTGG 1 cut(s) 903
PkrI GCNGC 6 cut(s) 256, 604, 672, 726, 1088, 1360
PluTI GGCGCC 1 cut(s) 219
Psp124BI GAGCTC 1 cut(s) 921
Psp6I CCWGG 1 cut(s) 1315
PspEI GGTNACC 1 cut(s) 128
PspFI CCCAGC 1 cut(s) 753
PspGI CCWGG 1 cut(s) 1315
PspN4I GGNNCC 3 cut(s) 217, 633, 1313
PspPI GGNCC 2 cut(s) 191, 632
PsuI RGATCY 1 cut(s) 1165
RsaI GTAC 2 cut(s) 17, 188
RsaNI GTAC 2 cut(s) 16, 187
RseI CAYNNNNRTG 1 cut(s) 680
SacI GAGCTC 1 cut(s) 921
SalI GTCGAC 1 cut(s) 1072
SatI GCNGC 6 cut(s) 255, 603, 671, 725, 1087, 1359
Sau3AI GATC 7 cut(s) 808, 825, 859, 1165, 1249, 1295, 1477
Sau96I GGNCC 2 cut(s) 191, 632
ScaI AGTACT 1 cut(s) 17
ScrFI CCNGG 1 cut(s) 1317
SduI GDGCHC 2 cut(s) 921, 1316
SfaNI GCATC 2 cut(s) 216, 705
SfoI GGCGCC 1 cut(s) 217
SinI GGWCC 1 cut(s) 632
SmiMI CAYNNNNRTG 1 cut(s) 680
SpeI ACTAGT 1 cut(s) 985
Sse9I AATT 3 cut(s) 1324, 1353, 1386
SsiI CCGC 6 cut(s) 107, 255, 603, 635, 1087, 1430
SspDI GGCGCC 1 cut(s) 215
SspMI CTAG 1 cut(s) 986
SstI GAGCTC 1 cut(s) 921
StyD4I CCNGG 1 cut(s) 1315
StyI CCWWGG 4 cut(s) 249, 687, 1362, 1446
TaaI ACNGT 3 cut(s) 15, 429, 970
TaiI ACGT 1 cut(s) 436
TaqI TCGA 2 cut(s) 295, 1073
TaqII GACCGA 1 cut(s) 116
TasI AATT 3 cut(s) 1324, 1353, 1386
TatI WGTACW 1 cut(s) 15
TauI GCSGC 3 cut(s) 257, 605, 1089
TfiI GAWTC 4 cut(s) 587, 651, 995, 1238
TscAI CASTG 3 cut(s) 883, 1035, 1050
TseFI GTSAC 4 cut(s) 128, 362, 429, 682
TseI GCWGC 3 cut(s) 670, 724, 1358
Tsp45I GTSAC 4 cut(s) 128, 362, 429, 682
TspGWI ACGGA 2 cut(s) 22, 413
TspRI CASTG 3 cut(s) 883, 1035, 1050
Van91I CCANNNNNTGG 1 cut(s) 903
VpaK11BI GGWCC 1 cut(s) 632
XapI RAATTY 1 cut(s) 1324
XceI RCATGY 1 cut(s) 1438
XmiI GTMKAC 1 cut(s) 1073
XspI CTAG 1 cut(s) 986
ZrmI AGTACT 1 cut(s) 17
Zsp2I ATGCAT 1 cut(s) 1376
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.