RchiOBHm_Chr1g0361111

Binds to actin and affects the structure of the cytoskeleton. At high concentrations, profilin prevents the polymerization of actin, whereas it enhances it at low concentrations

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
Physical Location & Seq
Forward (+)
53086600 .. 53086797
198 bp
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UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 198 bp
ATGGTATGGAAGCACTATATCATGTCTCACTTGATGTGCGACGTTACTGTGCTTCCCGGTCACGAAAATAACAGTGCCATGAAGGGCAATCACCTAACCACAGCTGCAATAGTAGGACAAGATGGCACTGTCTGGGCTCAAAGCTCCAATTTCCCCTCGGTTTGTTCCTATTACTTTTTTCTTTTTTGGAGTTTGTAG

Protein Analysis

65

Amino Acids

7.37

Weight (kDa)

6.36

Isoelectric Point (pI)

37.34

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AluBI AGCT 2 cut(s) 104, 144
AluI AGCT 2 cut(s) 104, 144
Alw26I GTCTC 1 cut(s) 30
ApeKI GCWGC 1 cut(s) 104
AsuC2I CCSGG 1 cut(s) 57
AsuHPI GGTGA 1 cut(s) 83
BanII GRGCYC 1 cut(s) 139
BbvI GCAGC 1 cut(s) 91
BccI CCATC 1 cut(s) 116
BcnI CCSGG 1 cut(s) 57
BcoDI GTCTC 1 cut(s) 30
BisI GCNGC 1 cut(s) 105
BlsI GCNGC 1 cut(s) 106
Bme1390I CCNGG 1 cut(s) 57
BmrFI CCNGG 1 cut(s) 57
BpuMI CCSGG 1 cut(s) 57
BsaJI CCNNGG 1 cut(s) 156
BseDI CCNNGG 1 cut(s) 156
BseXI GCAGC 1 cut(s) 91
BsiSI CCGG 1 cut(s) 57
BsmAI GTCTC 1 cut(s) 30
Bsp1286I GDGCHC 1 cut(s) 139
BssECI CCNNGG 1 cut(s) 156
Bst4CI ACNGT 3 cut(s) 49, 74, 130
BstMAI GTCTC 1 cut(s) 30
BstSCI CCNGG 1 cut(s) 55
BstV1I GCAGC 1 cut(s) 91
BtsIMutI CAGTG 2 cut(s) 79, 126
CviAII CATG 2 cut(s) 22, 79
CviJI RGCY 3 cut(s) 104, 137, 144
CviKI_1 RGCY 3 cut(s) 104, 137, 144
Eco24I GRGCYC 1 cut(s) 139
EcoT38I GRGCYC 1 cut(s) 139
FaeI CATG 2 cut(s) 25, 82
FaiI YATR 4 cut(s) 7, 18, 23, 80
FatI CATG 2 cut(s) 21, 78
Fnu4HI GCNGC 1 cut(s) 105
FriOI GRGCYC 1 cut(s) 139
Fsp4HI GCNGC 1 cut(s) 105
GluI GCNGC 1 cut(s) 105
HapII CCGG 1 cut(s) 57
Hin1II CATG 2 cut(s) 25, 82
HpaII CCGG 1 cut(s) 57
HphI GGTGA 1 cut(s) 83
Hpy188III TCNNGA 1 cut(s) 62
Hpy99I CGWCG 1 cut(s) 44
HpyAV CCTTC 1 cut(s) 76
HpyCH4III ACNGT 3 cut(s) 49, 74, 130
HpyCH4IV ACGT 1 cut(s) 42
HpyCH4V TGCA 1 cut(s) 107
HpySE526I ACGT 1 cut(s) 42
Hsp92II CATG 2 cut(s) 25, 82
LmnI GCTCC 1 cut(s) 149
LpnPI CCDG 2 cut(s) 70, 118
Lsp1109I GCAGC 1 cut(s) 91
MaeII ACGT 1 cut(s) 42
MaeIII GTNAC 2 cut(s) 43, 59
MhlI GDGCHC 1 cut(s) 139
MluCI AATT 1 cut(s) 148
MnlI CCTC 1 cut(s) 166
MspA1I CMGCKG 1 cut(s) 104
MspI CCGG 1 cut(s) 57
MspR9I CCNGG 1 cut(s) 57
NciI CCSGG 1 cut(s) 57
NlaIII CATG 2 cut(s) 25, 82
NmuCI GTSAC 1 cut(s) 59
PkrI GCNGC 1 cut(s) 106
PvuII CAGCTG 1 cut(s) 104
SatI GCNGC 1 cut(s) 105
ScrFI CCNGG 1 cut(s) 57
SduI GDGCHC 1 cut(s) 139
SetI ASST 4 cut(s) 45, 96, 106, 146
SgeI CNNG 9 cut(s) 34, 43, 68, 69, 74, 91, 131, 145, 169
Sse9I AATT 1 cut(s) 148
StyD4I CCNGG 1 cut(s) 55
TaaI ACNGT 3 cut(s) 49, 74, 130
TaiI ACGT 1 cut(s) 45
TasI AATT 1 cut(s) 148
TscAI CASTG 2 cut(s) 79, 133
TseFI GTSAC 1 cut(s) 59
TseI GCWGC 1 cut(s) 104
Tsp45I GTSAC 1 cut(s) 59
TspDTI ATGAA 1 cut(s) 95
TspRI CASTG 2 cut(s) 79, 133
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.