Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0001925

Physical Location & Seq

Genomic Coordinates Reverse (-)

53759209 .. 53770523

Gene Structure 11315 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3558 bp

ATGACTATTATAATTGAAGGATTTAAGAGCTACAGAGAACAAGTTGCTATTGAGCCATTCAGTCCAAAAATCAATTGTGTTGTTGGTGCTAATGGGTCTGGAAAGACGAACTTTTTCCATGCAATTCAGTTTGTACTAAGTGACCTTTTCCAAAACCTTCGGAGTGACGATCGGCATACGCTACTCCATGAAGGTGCAGGGCACCAAGTCTTATCTGCATTTGTGGAGATTGTCTTCGATAACTCTGACAATCGAATAACGGATGATAAGGAGGAAGTGCGGTTGCGAAGGACAATTGGTTTAAAGAAGGATGAGTATTTCTTGAATGGAAAGCACATCACGAAAACCGAGGTTATGAATTTACTGGAAAGTGCTGGGTTCTCTCGCTCCAATCCATATTATGTTGTGCAGCAAGGAAAGATAGCATCCTTGACACTGATGAAAGATTCTGAGCGACTGGATTTACTTAAGGAAATCGGTGGCACTCGAGTGTATGAGGAGAGATGTCAAGAAAGTTTGAAAATCATGCAGGACACTGGTAGCAAAAGAAAGCAGATAATTCAAGTTGTTCAGTACTTGGATGAGAGATTAAAGGAACTGGACGAAGAGAAAGAGGAACTTAGAAAGTATCAGCAGCTTGACAAGCAGCGAAAATCTCTGGAGTACACTATATATGACAAGGAACTTCAGGATGCTCGCCAAAGGCTGACAGAGGTAGAAGACGCTCGAAATAAGCTTTCTGAAACATCAACTCAAAAGAATAATAGCATGCTGGAGGCGCATGAAAAGTCCAAGGACTTGGATAAGGCTTTGAAAGATCTGACAAAAGAGCTACAAGCTTTAAATAAAGAGAAAGAAGCAGTAGAAAAGCGAAGAACAGAAGCAACAAAGAAACACACAGAGCTTGAGCTTGATGTCAAAGATCTACAGGAGAAGATATCTGGAAACATCCGAGCCAAAGAGGATGCTGTGAAACAACTACAAAGTCTGCAGAAAGAAATTCAGGATTCAATGGATGAGCTTGAGAAGATAAGTCCTCTGTATGAGAATCAAGTCATGAGGGAAAAGGAGATGACAAAGGGAATAATGGAGCGCGAGAAGCAGCTTAGCATACTTTATCAAAAACAAGGTCGTGCGACCCAGTTTCCAAGTAAAGCTGCTCGTGACAAATGGCTTCAAAAGGAAATTGATGATCTTGAACGAGTTCTTTCTTCAAATTTGGCACAGGAGAAAAAGCTTCAGGATGAAGTCAAACGTCTTAATTCTGAGTTGAATGAGCAGGGTACTTACATTGGATCTCAAAGAAATGAAATTACTACCATGGAGTGTGTCATCTCTCAGTTACGTGAAGGGTTCAGTCATTATAAAGCACAGAGGGACAAGATGAAGGATGAGCACAATACTCTATGGAAGAAAGAAACTGAACTTTCTGCTGAAATTGAGAAACTGAGAACAGAAGTTGAGAAGGCAGAGAAGAGCCTTGATCATGCAACTCCTGGTGATGTGAGGAGAGGGCTAAATTCTGTTCGTAAGATCTGCAGAGAGCATAATACTCCTGGGGTATTTGGCTGTGTTATTGAGCTGCTTGATTGTGAAGAAAAGTTATTTACTGCAGTGGACGTTGCTGCTGGGAACAGCTTATTTCATGTTGTGGTTGAAAATGATGATATATCAACTCAGATAATCAGGCACCTTAATTCACTGAAAGGTGGCCGTGTTACGTTTATCCCTCTGACTAGGGTGACGGCTCCAAGGGTAACTTGTCCACAAAATTCAGATCTGGTTCCTTTGTTGAAGAGGTTAAAATTTCTTCCAAAGTACACTGCTGCATTTGCTCAGGTATTTGCAAGAATAGTTGTTTGTCGAGATCTGGATGTGGCCACAAAGGTTGCTCATACCGATGGTCTAGACTGCATCACTTTAGAAGGAGATCAAGTCAGCAAGAAGGGTGGAATGACAGGAGGATTTTATGATCATAGACACTCAAAATTGAAGTTTATGAATCTAATCCGACAGAATGCAAAATCTACCAACTTGAAAGAAGAAGAACTTGAGAAAATCACATTTATGCTTGAAGATATCCTCTTAACTTTTATATATTTTCTCAATCTTGAAACTAAGCTGGGGAAAATTGATGCTGAGCGAGCTCACAGCAAATTAAAACTGGAACAGCTTAAGCAGGACATTGTGAATGCTAATAAGAAGGAAAGTTTAATTTCTAAAGCACTTGGGAATAAGGAAAAATCACTTGCTGATGTGCAGACTCAAATTGATCAGCTTAGAGCTAGTATGGCCATGAAGAGGGCTGAAATGGTCACTGATCTCATTGATCATTTGACTCCAAAGGAGAAGGATCTTCTCTCAAGATTGAACCCTGAAATAGCAGATCTTAAAGAGAAGCTTATTACATGCAAGGCGGATCGAACTGAGACTGAAGCAAGAAAGGTAGAGCTCGAGACTAATTTAACTATGAACCTTAAGAGGCGGAAGCAAGAATTAGAGACAACAGTATCTTCTGCGGAAACTGATAATTTGCATGGTGAAGATGAAATAAAGGTTCAGGAACTGAATGATGCTAGATTATTGGTTGAAGATGCAACAGAGCAGCTCAGAAGAGTTTCTGAAAGTATTGACGGTCAGTCAAGGAAGTTCAGGAAAACTAAGGATGAAAAGACTATGTGGAAGAACTCGGAAGACAACTATGAGAGGACATTTCAGGATGTAGCCAAAGAGCTAGAGCAGCAACTGAGTAAAAGAAATATGTATCTTGCTAAACAAGAAGAGTACTCAAAGAAAATCCGGGAATTGGTTGGCATGGTTCCTCATAGTTGCTTGTACTGGAATGGTAGGTATAAGCGAAGGAACATCAAAGAACTGCATAAAATGCTGCACAGTTGCAATGAGCAACTGCAACGGTTTAGTCATGTAAACAAGAAAGCACTTGACCAGTATGTAAATTTTACAGAACAACGTGAAGAACTCCAGAGAAGGCAAGCTGAACTGGATGCAGGTGATGAGAAAATTGCAGAACTTATATCTTTCTTAGATCAAAGGAAGGATGAATCAATAGAACGCACTTTTAAAGGTGTTGCTAGGAACTTTCGAGAAGTTTTCTCTGAACTTGTGCAAGGTGGCCATGGTCACCTTCTCATGGTGAAAAGAAAGGTTTCTTTTACCGGGCAAGGAGAGACTCAGTCCATGAAGCAGTTGTCTGGGGGTCAGAAAACTGTTGTTGCGTTGACGCTTATCTTTGCAATCCAGCAATGTGATCCTGCTCCTTTCTATCTTTTCGATGAAATAGATGCAGCGCTGGATCTTCAGTACAGAACTGCTGTTGGAAGTATCCTTTATGTCAGTGACAGTTGGTATATGATCCGACGCCTGGCAGATACAGAAACTACTCAATTTATAACTACAACATTCCGACAAGAGCTTGTGGAAGTTTCTGACAAGATCTATGGTGTTACACATTCAAACAGGGTGAGCCGTGTCAATGTTATCTCGAAGGAAGAAGCATTGAACTTTATTGATCAAGACCAGTCTCACTATGCTAACTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000785 GO:0000793 GO:0000819 GO:0003674 GO:0003682 GO:0003824 GO:0004672 GO:0004674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0005737 GO:0005819 GO:0005856 GO:0005911 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006996 GO:0007049 GO:0007059 GO:0007062 GO:0008150 GO:0008152 GO:0008278 GO:0009506 GO:0009507 GO:0009536 GO:0009987 GO:0010468 GO:0015630 GO:0016043 GO:0016301 GO:0016310 GO:0016363 GO:0016740 GO:0016772 GO:0016773 GO:0019222 GO:0019538 GO:0022402 GO:0030054 GO:0031974 GO:0031981 GO:0032991 GO:0034399 GO:0036211 GO:0042802 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044430 GO:0044444 GO:0044446 GO:0044464 GO:0050789 GO:0050794 GO:0051276 GO:0055044 GO:0060147 GO:0060255 GO:0060966 GO:0060968 GO:0065007 GO:0070013 GO:0071704 GO:0071840 GO:0098813 GO:0140096 GO:1900368 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04110 ko04111 ko04113 ko04114 map04110 map04111 map04113 map04114

Pfam Domains

Protein Families

SMC_N SMC_hinge

Protein Analysis

1185

Amino Acids

136.97

Weight (kDa)

6.59

Isoelectric Point (pI)

43.13

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
SMC_N	PF02463	2 - 1160	3.8e-62	RecF/RecN/SMC N terminal domain
AAA_15	PF13175	2 - 297	8.8e-11	AAA ATPase domain
AAA_23	PF13476	3 - 286	3.1e-14	AAA domain
AAA_21	PF13304	24 - 58	7.9e-06	AAA domain, putative AbiEii toxin, Type IV TA system
SMC_hinge	PF06470	519 - 631	4.7e-26	SMC proteins Flexible Hinge Domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0001925)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G27170 AT2G27170 AT2G27170 AT2G27170
fragaria_vesca	FvH4_5g11061 FvH4_5g11061 FvH4_5g11061 FvH4_5g11061 FvH4_5g11061 FvH4_5g11061
malus_domestica	MD03G1161700.v1.1 MD11G1177700.v1.1
prunus_persica	Prupe.6G149900_v2.0.a1 Prupe.6G149900_v2.0.a1
pyrus_communis	pycom03g11460 pycom03g11470 pycom03g11480 pycom11g15150 pycom11g15160 pycom11g15170
rosa_chinensis	RchiOBHm_Chr1g0362081 RchiOBHm_Chr7g0186721 RchiOBHm_Chr7g0186731
rosa_laevigata	RLG00000004823 RLG00000027673
rosa_multiflora	Rmu_co8477933.1_g000001 Rmu_sc0010614.1_g000002 Rmu_sc0017555.1_g000001 Rmu_sc0018615.1_g000001
rosa_roxburghii	Rroxscaffold_3G00267880 Rroxscaffold_4G00294520
rosa_rugosa	Rorug01G0293400 Rorug01G0293500 Rorug06G0475900 Rorug06G0476000 Rorug06G0476100
rosa_samantha	Rh1AG303600 Rh1BG266900 Rh1CG285000 Rh1DG296900 Rh7AG064800 Rh7BG081000 Rh7CG082800 Rh7DG083900
rosa_wichuraiana	Rw1G027040 Rw7G007200

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	3 cut(s)	11, 1365, 3410
AarI	CACCTGC	1 cut(s)	2999
Acc36I	ACCTGC	1 cut(s)	2999
AccB1I	GGYRCC	2 cut(s)	201, 1689
AccII	CGCG	1 cut(s)	1095
AciI	CCGC	4 cut(s)	280, 2417, 2485, 2519
AclWI	GGATC	6 cut(s)	1303, 2361, 2427, 3263, 3321, 3367
AcoI	YGGCCR	4 cut(s)	1711, 1878, 2292, 3133
AcsI	RAATTY	7 cut(s)	358, 999, 1216, 1519, 1771, 1805, 2956
AcuI	CTGAAG	4 cut(s)	671, 1223, 2454, 3302
AcyI	GRCGYC	1 cut(s)	3379
AfaI	GTAC	8 cut(s)	135, 575, 665, 1285, 1820, 2786, 2837, 3323
AfeI	AGCGCT	1 cut(s)	3309
AfiI	CCNNNNNNNGG	4 cut(s)	2301, 2806, 3151, 3382
AflII	CTTAAG	3 cut(s)	467, 2174, 2477
AhdI	GACNNNNNGTC	1 cut(s)	2638
AjnI	CCWGG	3 cut(s)	1495, 1555, 3381
AleI	CACNNNNGTG	1 cut(s)	488
Alw21I	GWGCWC	3 cut(s)	1398, 2149, 2454
Alw26I	GTCTC	5 cut(s)	2423, 2450, 2495, 3182, 3546
AlwI	GGATC	6 cut(s)	1303, 2361, 2427, 3263, 3321, 3367
AlwNI	CAGNNNCTG	2 cut(s)	2566, 2746
Ama87I	CYCGRG	2 cut(s)	486, 2453
Aor51HI	AGCGCT	1 cut(s)	3309
AoxI	GGCC	4 cut(s)	1711, 1878, 2292, 3133
ApoI	RAATTY	7 cut(s)	358, 999, 1216, 1519, 1771, 1805, 2956
ArsI	GACNNNNNNTTYG	2 cut(s)	1114, 1146
Asp700I	GAANNNNTTC	4 cut(s)	113, 1203, 2617, 3166
AspLEI	GCGC	3 cut(s)	781, 1095, 3310
AsuC2I	CCSGG	2 cut(s)	2801, 3178
AsuHPI	GGTGA	7 cut(s)	1511, 1753, 2552, 3023, 3134, 3166, 3493
AvaI	CYCGRG	2 cut(s)	486, 2453
BaeGI	GKGCMC	1 cut(s)	204
BaeI	ACNNNNGTAYC	2 cut(s)	2493, 2526
BalI	TGGCCA	3 cut(s)	1880, 2294, 3135
BanI	GGYRCC	2 cut(s)	201, 1689
BanII	GRGCYC	2 cut(s)	2149, 2454
BauI	CACGAG	1 cut(s)	1161
BbsI	GAAGAC	3 cut(s)	226, 726, 2700
Bbv12I	GWGCWC	3 cut(s)	1398, 2149, 2454
BccI	CCATC	1 cut(s)	1895
BceAI	ACGGC	3 cut(s)	1698, 1761, 3471
BciT130I	CCWGG	3 cut(s)	1497, 1557, 3383
BciVI	GTATCC	1 cut(s)	3353
BclI	TGATCA	5 cut(s)	1483, 1972, 2272, 2329, 3529
BcnI	CCSGG	2 cut(s)	2801, 3178
BcoDI	GTCTC	5 cut(s)	2423, 2450, 2495, 3182, 3546
BfaI	CTAG	6 cut(s)	1737, 1907, 2286, 2577, 2735, 3093
BfmI	CTRYAG	5 cut(s)	31, 926, 989, 1537, 1611
BfoI	RGCGCY	1 cut(s)	3311
BfrI	CTTAAG	3 cut(s)	467, 2174, 2477
BfuAI	ACCTGC	1 cut(s)	2999
BfuI	GTATCC	1 cut(s)	3353
BglII	AGATCT	7 cut(s)	817, 922, 1533, 1777, 1867, 2386, 3453
BlpI	GCTNAGC	2 cut(s)	1106, 2139
BmcAI	AGTACT	2 cut(s)	575, 2786
Bme1390I	CCNGG	5 cut(s)	1497, 1557, 2801, 3178, 3383
BmeRI	GACNNNNNGTC	1 cut(s)	2638
BmeT110I	CYCGRG	2 cut(s)	486, 2453
BmiI	GGNNCC	5 cut(s)	203, 1691, 1749, 1785, 2820
BmrFI	CCNGG	5 cut(s)	1497, 1557, 2801, 3178, 3383
BmrI	ACTGGG	1 cut(s)	1135
BmsI	GCATC	9 cut(s)	434, 682, 955, 1923, 2125, 2563, 2584, 2995, 3292
BmuI	ACTGGG	1 cut(s)	1135
BpiI	GAAGAC	3 cut(s)	226, 726, 2700
BpmI	CTGGAG	3 cut(s)	680, 794, 2966
Bpu10I	CCTNAGC	1 cut(s)	1836
Bpu1102I	GCTNAGC	2 cut(s)	1106, 2139
BpuEI	CTTGAG	4 cut(s)	926, 1043, 2072, 2347
BpuMI	CCSGG	2 cut(s)	2801, 3178
BsaAI	YACGTR	1 cut(s)	1346
BsaHI	GRCGYC	1 cut(s)	3379
BsaJI	CCNNGG	6 cut(s)	348, 792, 1320, 1556, 1751, 3136
BsaXI	ACNNNNNCTCC	2 cut(s)	1920, 1950
Bsc4I	CCNNNNNNNGG	4 cut(s)	2301, 2806, 3151, 3382
Bse3DI	GCAATG	2 cut(s)	2905, 3269
BseBI	CCWGG	3 cut(s)	1497, 1557, 3383
BseDI	CCNNGG	6 cut(s)	348, 792, 1320, 1556, 1751, 3136
BseLI	CCNNNNNNNGG	4 cut(s)	2301, 2806, 3151, 3382
BseMI	GCAATG	2 cut(s)	2905, 3269
BseRI	GAGGAG	2 cut(s)	512, 1522
BseSI	GKGCMC	1 cut(s)	204
BseYI	CCCAGC	3 cut(s)	374, 1628, 2122
BsgI	GTGCAG	4 cut(s)	216, 428, 2279, 2873
Bsh1236I	CGCG	1 cut(s)	1095
Bsh1285I	CGRYCG	1 cut(s)	172
BshFI	GGCC	4 cut(s)	1713, 1880, 2294, 3135
BshNI	GGYRCC	2 cut(s)	201, 1689
BsiEI	CGRYCG	1 cut(s)	172
BsiHKAI	GWGCWC	3 cut(s)	1398, 2149, 2454
BsiHKCI	CYCGRG	2 cut(s)	486, 2453
BsiSI	CCGG	2 cut(s)	2800, 3177
BslFI	GGGAC	1 cut(s)	1391
BslI	CCNNNNNNNGG	4 cut(s)	2301, 2806, 3151, 3382
BsmAI	GTCTC	5 cut(s)	2423, 2450, 2495, 3182, 3546
BsmFI	GGGAC	1 cut(s)	1391
BsmI	GAATGC	2 cut(s)	2023, 2197
BsnI	GGCC	4 cut(s)	1713, 1880, 2294, 3135
BsoBI	CYCGRG	2 cut(s)	486, 2453
Bsp1286I	GDGCHC	4 cut(s)	204, 1398, 2149, 2454
Bsp1720I	GCTNAGC	2 cut(s)	1106, 2139
Bsp19I	CCATGG	2 cut(s)	1320, 3136
BspACI	CCGC	4 cut(s)	280, 2417, 2485, 2519
BspANI	GGCC	4 cut(s)	1713, 1880, 2294, 3135
BspFNI	CGCG	1 cut(s)	1095
BspHI	TCATGA	1 cut(s)	1056
BspLI	GGNNCC	5 cut(s)	203, 1691, 1749, 1785, 2820
BspMAI	CTGCAG	3 cut(s)	993, 1541, 1615
BspMI	ACCTGC	1 cut(s)	2999
BspPI	GGATC	6 cut(s)	1303, 2361, 2427, 3263, 3321, 3367
BspQI	GCTCTTC	1 cut(s)	1469
BspT107I	GGYRCC	2 cut(s)	201, 1689
BspTI	CTTAAG	3 cut(s)	467, 2174, 2477
BsrDI	GCAATG	2 cut(s)	2905, 3269
BssECI	CCNNGG	6 cut(s)	348, 792, 1320, 1556, 1751, 3136
BssNI	GRCGYC	1 cut(s)	3379
BssSI	CACGAG	1 cut(s)	1161
BssT1I	CCWWGG	4 cut(s)	792, 1320, 1751, 3136
Bst2BI	CACGAG	1 cut(s)	1161
Bst2UI	CCWGG	3 cut(s)	1497, 1557, 3383
Bst4CI	ACNGT	6 cut(s)	2509, 2636, 2894, 2916, 3229, 3362
Bst6I	CTCTTC	6 cut(s)	600, 1469, 1790, 2294, 2608, 2775
BstACI	GRCGYC	1 cut(s)	3379
BstAFI	CTTAAG	3 cut(s)	467, 2174, 2477
BstAPI	GCANNNNNTGC	1 cut(s)	2884
BstBAI	YACGTR	1 cut(s)	1346
BstC8I	GCNNGC	4 cut(s)	697, 770, 2145, 2994
BstDSI	CCRYGG	2 cut(s)	1320, 3136
BstEII	GGTNACC	1 cut(s)	3140
BstFNI	CGCG	1 cut(s)	1095
BstH2I	RGCGCY	1 cut(s)	3311
BstHHI	GCGC	3 cut(s)	781, 1095, 3310
BstMAI	GTCTC	5 cut(s)	2423, 2450, 2495, 3182, 3546
BstMCI	CGRYCG	1 cut(s)	172
BstMWI	GCNNNNNNNGC	8 cut(s)	643, 778, 1099, 1832, 2144, 2291, 2740, 2884
BstNI	CCWGG	3 cut(s)	1497, 1557, 3383
BstNSI	RCATGY	2 cut(s)	772, 2412
BstPI	GGTNACC	1 cut(s)	3140
BstSCI	CCNGG	5 cut(s)	1495, 1555, 2799, 3176, 3381
BstSFI	CTRYAG	5 cut(s)	31, 926, 989, 1537, 1611
BstSLI	GKGCMC	1 cut(s)	204
BstUI	CGCG	1 cut(s)	1095
BstV2I	GAAGAC	3 cut(s)	226, 726, 2700
BstXI	CCANNNNNNTGG	1 cut(s)	799
BsuI	GTATCC	1 cut(s)	3353
BsuRI	GGCC	4 cut(s)	1713, 1880, 2294, 3135
BtgI	CCRYGG	2 cut(s)	1320, 3136
BtsI	GCAGTG	2 cut(s)	1620, 1821
BtsIMutI	CAGTG	7 cut(s)	434, 534, 1620, 1700, 1821, 2316, 3361
BveI	ACCTGC	1 cut(s)	2999
Cac8I	GCNNGC	4 cut(s)	697, 770, 2145, 2994
CaiI	CAGNNNCTG	2 cut(s)	2566, 2746
CciI	TCATGA	1 cut(s)	1056
CfoI	GCGC	3 cut(s)	781, 1095, 3310
CseI	GACGC	3 cut(s)	731, 3250, 3387
Csp6I	GTAC	8 cut(s)	134, 574, 664, 1284, 1819, 2785, 2836, 3322
CspCI	CAANNNNNGTGG	4 cut(s)	1870, 1905, 1930, 1965
CviQI	GTAC	8 cut(s)	134, 574, 664, 1284, 1819, 2785, 2836, 3322
DraI	TTTAAA	3 cut(s)	303, 843, 3082
DriI	GACNNNNNGTC	1 cut(s)	2638
EaeI	YGGCCR	4 cut(s)	1711, 1878, 2292, 3133
Eam1104I	CTCTTC	6 cut(s)	600, 1469, 1790, 2294, 2608, 2775
Eam1105I	GACNNNNNGTC	1 cut(s)	2638
EarI	CTCTTC	6 cut(s)	600, 1469, 1790, 2294, 2608, 2775
EciI	GGCGGA	2 cut(s)	2432, 2500
Ecl136II	GAGCTC	2 cut(s)	2147, 2452
Eco130I	CCWWGG	4 cut(s)	792, 1320, 1751, 3136
Eco24I	GRGCYC	2 cut(s)	2149, 2454
Eco32I	GATATC	2 cut(s)	939, 2080
Eco47III	AGCGCT	1 cut(s)	3309
Eco53kI	GAGCTC	2 cut(s)	2147, 2452
Eco57I	CTGAAG	4 cut(s)	671, 1223, 2454, 3302
Eco88I	CYCGRG	2 cut(s)	486, 2453
Eco91I	GGTNACC	1 cut(s)	3140
EcoICRI	GAGCTC	2 cut(s)	2147, 2452
EcoO65I	GGTNACC	1 cut(s)	3140
EcoRII	CCWGG	3 cut(s)	1495, 1555, 3381
EcoRV	GATATC	2 cut(s)	939, 2080
EcoT14I	CCWWGG	4 cut(s)	792, 1320, 1751, 3136
EcoT38I	GRGCYC	2 cut(s)	2149, 2454
ErhI	CCWWGG	4 cut(s)	792, 1320, 1751, 3136
FaqI	GGGAC	1 cut(s)	1391
FbaI	TGATCA	5 cut(s)	1483, 1972, 2272, 2329, 3529
FriOI	GRGCYC	2 cut(s)	2149, 2454
FspBI	CTAG	6 cut(s)	1737, 1907, 2286, 2577, 2735, 3093
GlaI	GCGC	3 cut(s)	780, 1094, 3309
GsaI	CCCAGC	3 cut(s)	378, 1632, 2126
GsuI	CTGGAG	3 cut(s)	680, 794, 2966
HaeII	RGCGCY	1 cut(s)	3311
HaeIII	GGCC	4 cut(s)	1713, 1880, 2294, 3135
HapII	CCGG	2 cut(s)	2800, 3177
HgaI	GACGC	3 cut(s)	731, 3250, 3387
HhaI	GCGC	3 cut(s)	781, 1095, 3310
Hin1I	GRCGYC	1 cut(s)	3379
Hin6I	GCGC	3 cut(s)	779, 1093, 3308
HinP1I	GCGC	3 cut(s)	779, 1093, 3308
HincII	GTYRAC	1 cut(s)	3240
HindII	GTYRAC	1 cut(s)	3240
HindIII	AAGCTT	4 cut(s)	734, 837, 1235, 2399
HinfI	GANTC	8 cut(s)	446, 1007, 1048, 2002, 2263, 2338, 3062, 3190
HpaII	CCGG	2 cut(s)	2800, 3177
HphI	GGTGA	7 cut(s)	1511, 1753, 2552, 3023, 3134, 3166, 3493
Hpy166II	GTNNAC	6 cut(s)	666, 1618, 1766, 1821, 2929, 3240
Hpy8I	GTNNAC	6 cut(s)	666, 1618, 1766, 1821, 2929, 3240
Hpy99I	CGWCG	1 cut(s)	3381
HpyCH4III	ACNGT	6 cut(s)	2509, 2636, 2894, 2916, 3229, 3362
HpyCH4IV	ACGT	5 cut(s)	1255, 1345, 1620, 1721, 2971
HpyF10VI	GCNNNNNNNGC	8 cut(s)	643, 778, 1099, 1832, 2144, 2291, 2740, 2884
HpySE526I	ACGT	5 cut(s)	1255, 1345, 1620, 1721, 2971
Hsp92I	GRCGYC	1 cut(s)	3379
HspAI	GCGC	3 cut(s)	779, 1093, 3308
Ksp22I	TGATCA	5 cut(s)	1483, 1972, 2272, 2329, 3529
LguI	GCTCTTC	1 cut(s)	1469
LmnI	GCTCC	4 cut(s)	392, 1090, 1753, 3280
LweI	GCATC	9 cut(s)	434, 682, 955, 1923, 2125, 2563, 2584, 2995, 3292
MaeI	CTAG	6 cut(s)	1737, 1907, 2286, 2577, 2735, 3093
MaeII	ACGT	5 cut(s)	1255, 1345, 1620, 1721, 2971
MfeI	CAATTG	2 cut(s)	73, 294
MhlI	GDGCHC	4 cut(s)	204, 1398, 2149, 2454
MlsI	TGGCCA	3 cut(s)	1880, 2294, 3135
MluNI	TGGCCA	3 cut(s)	1880, 2294, 3135
MlyI	GAGTC	3 cut(s)	2257, 2332, 3184
MmeI	TCCRAC	4 cut(s)	2035, 3316, 3400, 3448
Mox20I	TGGCCA	3 cut(s)	1880, 2294, 3135
MroXI	GAANNNNTTC	4 cut(s)	113, 1203, 2617, 3166
MscI	TGGCCA	3 cut(s)	1880, 2294, 3135
MslI	CAYNNNNRTG	4 cut(s)	192, 488, 1899, 2066
Msp20I	TGGCCA	3 cut(s)	1880, 2294, 3135
MspCI	CTTAAG	3 cut(s)	467, 2174, 2477
MspI	CCGG	2 cut(s)	2800, 3177
MspR9I	CCNGG	5 cut(s)	1497, 1557, 2801, 3178, 3383
MunI	CAATTG	2 cut(s)	73, 294
Mva1269I	GAATGC	2 cut(s)	2023, 2197
MvaI	CCWGG	3 cut(s)	1497, 1557, 3383
MvnI	CGCG	1 cut(s)	1095
MwoI	GCNNNNNNNGC	8 cut(s)	643, 778, 1099, 1832, 2144, 2291, 2740, 2884
NciI	CCSGG	2 cut(s)	2801, 3178
NcoI	CCATGG	2 cut(s)	1320, 3136
NlaIV	GGNNCC	5 cut(s)	203, 1691, 1749, 1785, 2820
NmuCI	GTSAC	7 cut(s)	140, 164, 1163, 1741, 2314, 3140, 3356
NspI	RCATGY	2 cut(s)	772, 2412
OliI	CACNNNNGTG	1 cut(s)	488
PaeI	GCATGC	1 cut(s)	772
PaeR7I	CTCGAG	2 cut(s)	486, 2453
PagI	TCATGA	1 cut(s)	1056
PaqCI	CACCTGC	1 cut(s)	2999
PciSI	GCTCTTC	1 cut(s)	1469
PctI	GAATGC	2 cut(s)	2023, 2197
PdmI	GAANNNNTTC	4 cut(s)	113, 1203, 2617, 3166
PfeI	GAWTC	5 cut(s)	446, 1007, 1048, 2002, 3062
PflFI	GACNNNGTC	1 cut(s)	3193
PfoI	TCCNGGA	1 cut(s)	2799
Ple19I	CGATCG	1 cut(s)	172
PleI	GAGTC	3 cut(s)	2257, 2332, 3184
PpsI	GAGTC	3 cut(s)	2257, 2332, 3184
Ppu21I	YACGTR	1 cut(s)	1346
PsiI	TTATAA	3 cut(s)	11, 1365, 3410
Psp124BI	GAGCTC	2 cut(s)	2149, 2454
Psp6I	CCWGG	3 cut(s)	1495, 1555, 3381
PspEI	GGTNACC	1 cut(s)	3140
PspFI	CCCAGC	3 cut(s)	374, 1628, 2122
PspGI	CCWGG	3 cut(s)	1495, 1555, 3381
PspN4I	GGNNCC	5 cut(s)	203, 1691, 1749, 1785, 2820
PspXI	VCTCGAGB	1 cut(s)	486
PstI	CTGCAG	3 cut(s)	993, 1541, 1615
PstNI	CAGNNNCTG	2 cut(s)	2566, 2746
PsyI	GACNNNGTC	1 cut(s)	3193
PvuI	CGATCG	1 cut(s)	172
RsaI	GTAC	8 cut(s)	135, 575, 665, 1285, 1820, 2786, 2837, 3323
RsaNI	GTAC	8 cut(s)	134, 574, 664, 1284, 1819, 2785, 2836, 3322
RseI	CAYNNNNRTG	4 cut(s)	192, 488, 1899, 2066
SacI	GAGCTC	2 cut(s)	2149, 2454
SapI	GCTCTTC	1 cut(s)	1469
ScaI	AGTACT	2 cut(s)	575, 2786
SchI	GAGTC	3 cut(s)	2257, 2332, 3184
ScrFI	CCNGG	5 cut(s)	1497, 1557, 2801, 3178, 3383
SduI	GDGCHC	4 cut(s)	204, 1398, 2149, 2454
SfaNI	GCATC	9 cut(s)	434, 682, 955, 1923, 2125, 2563, 2584, 2995, 3292
SfcI	CTRYAG	5 cut(s)	31, 926, 989, 1537, 1611
Sfr274I	CTCGAG	2 cut(s)	486, 2453
SlaI	CTCGAG	2 cut(s)	486, 2453
SmiMI	CAYNNNNRTG	4 cut(s)	192, 488, 1899, 2066
SmlI	CTYRAG	9 cut(s)	467, 486, 905, 1022, 2051, 2174, 2362, 2453, 2477
SmoI	CTYRAG	9 cut(s)	467, 486, 905, 1022, 2051, 2174, 2362, 2453, 2477
SphI	GCATGC	1 cut(s)	772
SsiI	CCGC	4 cut(s)	280, 2417, 2485, 2519
SspMI	CTAG	6 cut(s)	1737, 1907, 2286, 2577, 2735, 3093
SstI	GAGCTC	2 cut(s)	2149, 2454
StyD4I	CCNGG	5 cut(s)	1495, 1555, 2799, 3176, 3381
StyI	CCWWGG	4 cut(s)	792, 1320, 1751, 3136
TaaI	ACNGT	6 cut(s)	2509, 2636, 2894, 2916, 3229, 3362
TaiI	ACGT	5 cut(s)	1258, 1348, 1623, 1724, 2974
TatI	WGTACW	7 cut(s)	133, 573, 663, 1818, 2784, 2835, 3321
TfiI	GAWTC	5 cut(s)	446, 1007, 1048, 2002, 3062
TscAI	CASTG	7 cut(s)	441, 541, 1620, 1707, 1828, 2323, 3361
TseFI	GTSAC	7 cut(s)	140, 164, 1163, 1741, 2314, 3140, 3356
Tsp45I	GTSAC	7 cut(s)	140, 164, 1163, 1741, 2314, 3140, 3356
TspGWI	ACGGA	1 cut(s)	275
TspRI	CASTG	7 cut(s)	441, 541, 1620, 1707, 1828, 2323, 3361
Tth111I	GACNNNGTC	1 cut(s)	3193
Vha464I	CTTAAG	3 cut(s)	467, 2174, 2477
XapI	RAATTY	7 cut(s)	358, 999, 1216, 1519, 1771, 1805, 2956
XbaI	TCTAGA	1 cut(s)	1906
XceI	RCATGY	2 cut(s)	772, 2412
XhoI	CTCGAG	2 cut(s)	486, 2453
XmnI	GAANNNNTTC	4 cut(s)	113, 1203, 2617, 3166
XspI	CTAG	6 cut(s)	1737, 1907, 2286, 2577, 2735, 3093
ZrmI	AGTACT	2 cut(s)	575, 2786

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.