RchiOBHm_Chr2g0135111

Protein kinase domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
OG0001247
Physical Location & Seq
Reverse (-)
52182007 .. 52186226
4220 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ50606

Sequence Viewer

Length: 1857 bp
ATGGAGCAGCAAATTGCAAAAGAAAAGCCTGCAATTGCTTTCGAGTATGAGCTCTTTGAAGACCCTGATCATCTAACAACTGTTGTAGCTACACTCACTCCAACTAGTCCCTGGATCGATCCTGCCTCATTGAACTTTAAGTACCGAATTGGACGAGGCCCCTTTGGTGATGTATGGTTAGCAACTCATCATCAGTCAGCGGATGATTATGATGAATATCATGAGGTAGCGGTTAAGATGTTGCATCCTTTGAAGGAGGAGGACAGAGAAAAGTTTCTGAGCAAGTTTGAAAAGTTATTTTTCAAGTTCCGCAGACTGTGCGGTGTTTGTTGGTTTCATGGTATCTCAATCATTGATGGAAGGATCTGTATTGCTATGAAATTTTATGAGGGGTCAGTTGGTGACCGAGTTGCTAGGTTGAAGGGTGGAAAACTTCAACTTTTTGATGTTTTAAGGTATGGGATTGAGTTGGCAAAAGGAATTTCAGAATTGCATTCACTAGGGCTTCTGGTGCTAAATTTGAAGCCGTCCAACATCCTTGTAGATGAACACGGCCAGGTGGTCCTTGGAGATTTTGGAATCCCATTTCTACTTCTTGGGGCTTCATTGTCTAATCCTAATATGGCTTTTAGACTTGGCACTCCGAACTACATGGCTCCAGAACAGTGGGAACCAGAAGTGAGGGGTCCTATATCTTTAGAAACAGATTCTTGGGGCTTTGGATGTTGCTTTGTAGAGATGTTGACCGGTAGTCAACCCTGGTTTGGGAGTTCAATTAAAGAAATATATCATTCAGTTGTGATCAAGCGAGAAAAGCCACCTGTTCCAAGTGGTTTGCCTCCTGCAGTGGAGAATGTTATCAACGGCTGCTTTGAGTATGATCTCCGTAATAGGCCTTCAATGGAAGATATCATACGTGCATTGGAAAGCTCACAAAAAGATGTTCAAAGCGATGGAGAATGGCTTGGTTTAGGGAGCAGCACACCTGCTGGAAAACTTAGTAGCGGCAGTTACAGTGCGTGGCATCTCTTAAAAGATGATCTCCAGGTTGGAGACATAGTTCGCTCCAGAAAGCCAGTAAATGCACGCAAGCGTCAAGCTCTTGATGTCCCTGAAGGAATTGTAACTGGCCTGGAAAGTGATTCTTGTAGTGCCCTGGTGAAGATCCCTCGAGCGCGCAAGCCTGTCAGAGTATCAGTGTCAACACTTGAGAGAGTCACATCTGGCTTGACAGCAGGTGATTGGGTGCGGTTGAAGGGAGAACTGCACAAGCACTCTCCTGTTGGAATTCTTCATTCAATACAACGTGATGGAAGTGTTGCTGTTGGATTTATTGGGCTAGAGACTCTATGGAGAGGGAAATCATCTGACATTGAAATGGCTGATGCATATTATGTAGGAGAGTTTGTGAGGCTGAAGGTGAATGTGGTTACTCCCAGATTTGAGTGGCCTCGTAAGGGTGGAGGGGGGGTATGGGCTACTGGAAGGATCTCACAAGTCCTTCCGAATGGTTGTCTGGTTGTGAGGTTCCCTGGAAGATTGGAATTTGGAGATGAAGCTCGTAGCTTCTTGGCAGATCCATATGAAGTAGAACTAGTGTCCTTTGATACTTGTCCTGGTCTGGTTGAAAAATATCAACATGTTGAGGATTTTCACTGGGCAGTCAGGCCACTTACAGTTGCATTTGGTCTCTTTACAGCCATGAAGTTCAGCTTGTTTGTTGGACGAAATGTAAGCGCAAGGGTGAAAGGCCGAAGAAACTCAGTACAGGGCCAGAGTGGTGGAAATTCAGCTTGGCTTCCTCCACCGGTTGCAAATCTTTTCAAAGAAGGTTCTTCTACTGCTACTGCTAGGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0001101 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004842 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005769 GO:0005794 GO:0005802 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006810 GO:0006950 GO:0006952 GO:0007034 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0009719 GO:0009725 GO:0009737 GO:0009738 GO:0009755 GO:0009787 GO:0009788 GO:0009966 GO:0009968 GO:0009987 GO:0010033 GO:0010646 GO:0010648 GO:0012505 GO:0016192 GO:0016197 GO:0016301 GO:0016310 GO:0016567 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0019787 GO:0023051 GO:0023052 GO:0023057 GO:0031410 GO:0031982 GO:0031984 GO:0032446 GO:0032502 GO:0032870 GO:0032940 GO:0033993 GO:0036211 GO:0040007 GO:0042221 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043621 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044431 GO:0044444 GO:0044446 GO:0044464 GO:0045324 GO:0046903 GO:0046907 GO:0048519 GO:0048523 GO:0048583 GO:0048585 GO:0048589 GO:0050789 GO:0050794 GO:0050896 GO:0051179 GO:0051234 GO:0051641 GO:0051649 GO:0051716 GO:0065007 GO:0070647 GO:0070887 GO:0071215 GO:0071229 GO:0071310 GO:0071396 GO:0071495 GO:0071704 GO:0097305 GO:0097306 GO:0097708 GO:0098791 GO:0140096 GO:1901419 GO:1901420 GO:1901564 GO:1901700 GO:1901701 GO:1905957 GO:1905958
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DOG1 Pkinase Pkinase_Tyr

Protein Analysis

618

Amino Acids

68.61

Weight (kDa)

6.96

Isoelectric Point (pI)

34.97

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PK_Tyr_Ser-Thr PF07714 45 - 308 2.4e-31 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 47 - 305 4.1e-28 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 994, 1226
Acc36I ACCTGC 2 cut(s) 994, 1226
AccII CGCG 1 cut(s) 1177
AciI CCGC 6 cut(s) 200, 230, 310, 321, 1005, 1249
AclWI GGATC 6 cut(s) 113, 122, 371, 1159, 1496, 1571
AcoI YGGCCR 1 cut(s) 553
AcsI RAATTY 6 cut(s) 380, 480, 517, 1287, 1544, 1786
AcuI CTGAAG 2 cut(s) 1134, 1436
AfaI GTAC 2 cut(s) 143, 1767
AfiI CCNNNNNNNGG 3 cut(s) 764, 765, 1457
AflIII ACRYGT 1 cut(s) 1639
AgeI ACCGGT 2 cut(s) 746, 1807
AhdI GACNNNNNGTC 1 cut(s) 750
AhlI ACTAGT 2 cut(s) 104, 1594
AjnI CCWGG 8 cut(s) 110, 555, 758, 1044, 1131, 1155, 1531, 1615
AjuI GAANNNNNNNTTGG 2 cut(s) 1777, 1809
AloI GAACNNNNNNTCC 2 cut(s) 1044, 1076
AluBI AGCT 8 cut(s) 52, 89, 930, 1100, 1559, 1566, 1713, 1793
AluI AGCT 8 cut(s) 52, 89, 930, 1100, 1559, 1566, 1713, 1793
Alw21I GWGCWC 1 cut(s) 54
Alw26I GTCTC 3 cut(s) 1047, 1337, 1694
AlwI GGATC 6 cut(s) 113, 122, 371, 1159, 1496, 1571
Ama87I CYCGRG 1 cut(s) 1170
AoxI GGCC 8 cut(s) 157, 553, 893, 1129, 1448, 1667, 1750, 1771
ApeKI GCWGC 3 cut(s) 7, 867, 978
ApoI RAATTY 6 cut(s) 380, 480, 517, 1287, 1544, 1786
AsiGI ACCGGT 2 cut(s) 746, 1807
Asp700I GAANNNNTTC 1 cut(s) 273
AspLEI GCGC 3 cut(s) 1177, 1179, 1739
AspS9I GGNCC 4 cut(s) 158, 562, 686, 1771
AsuHPI GGTGA 6 cut(s) 179, 413, 1171, 1250, 1432, 1756
AvaI CYCGRG 1 cut(s) 1170
AvaII GGWCC 2 cut(s) 562, 686
BaeGI GKGCMC 1 cut(s) 1156
BanII GRGCYC 1 cut(s) 54
BarI GAAGNNNNNNTAC 4 cut(s) 880, 897, 912, 929
BbsI GAAGAC 1 cut(s) 66
Bbv12I GWGCWC 1 cut(s) 54
BbvI GCAGC 3 cut(s) 19, 854, 990
BccI CCATC 3 cut(s) 350, 947, 1304
BceAI ACGGC 3 cut(s) 511, 568, 880
BciT130I CCWGG 8 cut(s) 112, 557, 760, 1046, 1133, 1157, 1533, 1617
BclI TGATCA 2 cut(s) 67, 801
BcoDI GTCTC 3 cut(s) 1047, 1337, 1694
BcuI ACTAGT 2 cut(s) 104, 1594
BfaI CTAG 6 cut(s) 105, 414, 500, 1340, 1595, 1851
BfmI CTRYAG 1 cut(s) 843
BfuAI ACCTGC 2 cut(s) 994, 1226
BisI GCNGC 4 cut(s) 8, 868, 979, 1006
BlsI GCNGC 4 cut(s) 9, 869, 980, 1007
Bme1390I CCNGG 8 cut(s) 112, 557, 760, 1046, 1133, 1157, 1533, 1617
Bme18I GGWCC 2 cut(s) 562, 686
BmeRI GACNNNNNGTC 1 cut(s) 750
BmeT110I CYCGRG 1 cut(s) 1170
BmgT120I GGNCC 4 cut(s) 158, 562, 686, 1771
BmiI GGNNCC 5 cut(s) 160, 657, 672, 687, 1529
BmrFI CCNGG 8 cut(s) 112, 557, 760, 1046, 1133, 1157, 1533, 1617
BmrI ACTGGG 1 cut(s) 1666
BmsI GCATC 3 cut(s) 253, 1033, 1375
BmuI ACTGGG 1 cut(s) 1666
BpiI GAAGAC 1 cut(s) 66
BpmI CTGGAG 3 cut(s) 642, 1028, 1051
BpuEI CTTGAG 1 cut(s) 1229
Bsa29I ATCGAT 1 cut(s) 117
BsaAI YACGTR 1 cut(s) 917
BsaBI GATNNNNATC 1 cut(s) 216
BsaI GGTCTC 1 cut(s) 1694
BsaJI CCNNGG 5 cut(s) 110, 565, 758, 1155, 1531
BsaWI WCCGGW 2 cut(s) 746, 1807
BsaXI ACNNNNNCTCC 8 cut(s) 82, 112, 1044, 1074, 1392, 1422, 1455, 1485
Bsc4I CCNNNNNNNGG 3 cut(s) 764, 765, 1457
Bse118I RCCGGY 2 cut(s) 746, 1807
Bse1I ACTGG 4 cut(s) 1076, 1132, 1486, 1661
Bse8I GATNNNNATC 1 cut(s) 216
BseBI CCWGG 8 cut(s) 112, 557, 760, 1046, 1133, 1157, 1533, 1617
BseCI ATCGAT 1 cut(s) 117
BseDI CCNNGG 5 cut(s) 110, 565, 758, 1155, 1531
BseGI GGATG 4 cut(s) 208, 244, 534, 728
BseJI GATNNNNATC 1 cut(s) 216
BseLI CCNNNNNNNGG 3 cut(s) 764, 765, 1457
BseMII CTCAG 2 cut(s) 269, 1776
BseNI ACTGG 4 cut(s) 1076, 1132, 1486, 1661
BsePI GCGCGC 1 cut(s) 1175
BseRI GAGGAG 1 cut(s) 272
BseSI GKGCMC 1 cut(s) 1156
BseXI GCAGC 3 cut(s) 19, 854, 990
BsgI GTGCAG 1 cut(s) 1250
Bsh1236I CGCG 1 cut(s) 1177
BshFI GGCC 8 cut(s) 159, 555, 895, 1131, 1450, 1669, 1752, 1773
BshTI ACCGGT 2 cut(s) 746, 1807
BshVI ATCGAT 1 cut(s) 117
BsiHKAI GWGCWC 1 cut(s) 54
BsiHKCI CYCGRG 1 cut(s) 1170
BsiSI CCGG 2 cut(s) 747, 1808
BslFI GGGAC 2 cut(s) 93, 1094
BslI CCNNNNNNNGG 3 cut(s) 764, 765, 1457
BsmAI GTCTC 3 cut(s) 1047, 1337, 1694
BsmFI GGGAC 2 cut(s) 93, 1094
BsmI GAATGC 1 cut(s) 493
BsnI GGCC 8 cut(s) 159, 555, 895, 1131, 1450, 1669, 1752, 1773
Bso31I GGTCTC 1 cut(s) 1694
BsoBI CYCGRG 1 cut(s) 1170
Bsp1286I GDGCHC 2 cut(s) 54, 1156
BspACI CCGC 6 cut(s) 200, 230, 310, 321, 1005, 1249
BspANI GGCC 8 cut(s) 159, 555, 895, 1131, 1450, 1669, 1752, 1773
BspCNI CTCAG 2 cut(s) 270, 1775
BspDI ATCGAT 1 cut(s) 117
BspFNI CGCG 1 cut(s) 1177
BspHI TCATGA 1 cut(s) 220
BspLI GGNNCC 5 cut(s) 160, 657, 672, 687, 1529
BspMAI CTGCAG 1 cut(s) 847
BspMI ACCTGC 2 cut(s) 994, 1226
BspPI GGATC 6 cut(s) 113, 122, 371, 1159, 1496, 1571
BspTNI GGTCTC 1 cut(s) 1694
BsrFI RCCGGY 2 cut(s) 746, 1807
BsrI ACTGG 4 cut(s) 1076, 1132, 1486, 1661
BssAI RCCGGY 2 cut(s) 746, 1807
BssECI CCNNGG 5 cut(s) 110, 565, 758, 1155, 1531
BssHII GCGCGC 1 cut(s) 1175
BssT1I CCWWGG 1 cut(s) 565
Bst2UI CCWGG 8 cut(s) 112, 557, 760, 1046, 1133, 1157, 1533, 1617
Bst4CI ACNGT 5 cut(s) 82, 318, 666, 1016, 1678
BstAPI GCANNNNNTGC 1 cut(s) 318
BstBAI YACGTR 1 cut(s) 917
BstC8I GCNNGC 5 cut(s) 30, 1087, 1091, 1177, 1181
BstDEI CTNAG 3 cut(s) 278, 998, 1762
BstEII GGTNACC 1 cut(s) 401
BstF5I GGATG 4 cut(s) 208, 244, 534, 728
BstFNI CGCG 1 cut(s) 1177
BstHHI GCGC 3 cut(s) 1177, 1179, 1739
BstMAI GTCTC 3 cut(s) 1047, 1337, 1694
BstMWI GCNNNNNNNGC 3 cut(s) 318, 511, 814
BstNI CCWGG 8 cut(s) 112, 557, 760, 1046, 1133, 1157, 1533, 1617
BstNSI RCATGY 1 cut(s) 1643
BstPI GGTNACC 1 cut(s) 401
BstSCI CCNGG 8 cut(s) 110, 555, 758, 1044, 1131, 1155, 1531, 1615
BstSFI CTRYAG 1 cut(s) 843
BstSLI GKGCMC 1 cut(s) 1156
BstUI CGCG 1 cut(s) 1177
BstV1I GCAGC 3 cut(s) 19, 854, 990
BstV2I GAAGAC 1 cut(s) 66
BstX2I RGATCY 4 cut(s) 363, 1164, 1488, 1576
BstXI CCANNNNNNTGG 2 cut(s) 666, 1781
BstYI RGATCY 4 cut(s) 363, 1164, 1488, 1576
Bsu15I ATCGAT 1 cut(s) 117
BsuRI GGCC 8 cut(s) 159, 555, 895, 1131, 1450, 1669, 1752, 1773
BsuTUI ATCGAT 1 cut(s) 117
BtgZI GCGATG 1 cut(s) 966
BtsCI GGATG 4 cut(s) 208, 244, 534, 728
BtsI GCAGTG 1 cut(s) 852
BtsIMutI CAGTG 5 cut(s) 671, 852, 1021, 1203, 1654
BveI ACCTGC 2 cut(s) 994, 1226
Cac8I GCNNGC 5 cut(s) 30, 1087, 1091, 1177, 1181
CciI TCATGA 1 cut(s) 220
CfoI GCGC 3 cut(s) 1177, 1179, 1739
Cfr10I RCCGGY 2 cut(s) 746, 1807
Cfr13I GGNCC 4 cut(s) 158, 562, 686, 1771
ClaI ATCGAT 1 cut(s) 117
CseI GACGC 1 cut(s) 1082
Csp6I GTAC 2 cut(s) 142, 1766
CspAI ACCGGT 2 cut(s) 746, 1807
CviAII CATG 5 cut(s) 221, 338, 652, 1640, 1702
CviQI GTAC 2 cut(s) 142, 1766
DdeI CTNAG 3 cut(s) 278, 998, 1762
DriI GACNNNNNGTC 1 cut(s) 750
EaeI YGGCCR 1 cut(s) 553
Eam1105I GACNNNNNGTC 1 cut(s) 750
Ecl136II GAGCTC 1 cut(s) 52
Eco130I CCWWGG 1 cut(s) 565
Eco147I AGGCCT 1 cut(s) 895
Eco24I GRGCYC 1 cut(s) 54
Eco31I GGTCTC 1 cut(s) 1694
Eco32I GATATC 1 cut(s) 910
Eco47I GGWCC 2 cut(s) 562, 686
Eco53kI GAGCTC 1 cut(s) 52
Eco57I CTGAAG 2 cut(s) 1134, 1436
Eco88I CYCGRG 1 cut(s) 1170
Eco91I GGTNACC 1 cut(s) 401
EcoICRI GAGCTC 1 cut(s) 52
EcoO109I RGGNCCY 2 cut(s) 158, 686
EcoO65I GGTNACC 1 cut(s) 401
EcoRI GAATTC 1 cut(s) 1287
EcoRII CCWGG 8 cut(s) 110, 555, 758, 1044, 1131, 1155, 1531, 1615
EcoRV GATATC 1 cut(s) 910
EcoT14I CCWWGG 1 cut(s) 565
EcoT22I ATGCAT 1 cut(s) 1390
EcoT38I GRGCYC 1 cut(s) 54
ErhI CCWWGG 1 cut(s) 565
FaeI CATG 5 cut(s) 224, 341, 655, 1643, 1705
FalI AAGNNNNNCTT 4 cut(s) 1129, 1161, 1697, 1729
FaqI GGGAC 2 cut(s) 93, 1094
FatI CATG 5 cut(s) 220, 337, 651, 1639, 1701
FauNDI CATATG 1 cut(s) 1582
FbaI TGATCA 2 cut(s) 67, 801
Fnu4HI GCNGC 4 cut(s) 8, 868, 979, 1006
FokI GGATG 4 cut(s) 215, 231, 521, 735
FriOI GRGCYC 1 cut(s) 54
Fsp4HI GCNGC 4 cut(s) 8, 868, 979, 1006
FspBI CTAG 6 cut(s) 105, 414, 500, 1340, 1595, 1851
GlaI GCGC 3 cut(s) 1176, 1178, 1738
GluI GCNGC 4 cut(s) 8, 868, 979, 1006
GsuI CTGGAG 3 cut(s) 642, 1028, 1051
HaeIII GGCC 8 cut(s) 159, 555, 895, 1131, 1450, 1669, 1752, 1773
HapII CCGG 2 cut(s) 747, 1808
HgaI GACGC 1 cut(s) 1082
HhaI GCGC 3 cut(s) 1177, 1179, 1739
Hin1II CATG 5 cut(s) 224, 341, 655, 1643, 1705
Hin6I GCGC 3 cut(s) 1175, 1177, 1737
HinP1I GCGC 3 cut(s) 1175, 1177, 1737
HincII GTYRAC 3 cut(s) 744, 755, 1203
HindII GTYRAC 3 cut(s) 744, 755, 1203
HinfI GANTC 5 cut(s) 579, 707, 1142, 1215, 1345
HpaII CCGG 2 cut(s) 747, 1808
HphI GGTGA 6 cut(s) 179, 413, 1171, 1250, 1432, 1756
Hpy166II GTNNAC 3 cut(s) 744, 755, 1203
Hpy188I TCNGA 6 cut(s) 279, 487, 645, 1190, 1369, 1506
Hpy188III TCNNGA 4 cut(s) 221, 659, 1068, 1103
Hpy8I GTNNAC 3 cut(s) 744, 755, 1203
HpyCH4III ACNGT 5 cut(s) 82, 318, 666, 1016, 1678
HpyCH4IV ACGT 2 cut(s) 916, 1306
HpyF10VI GCNNNNNNNGC 3 cut(s) 318, 511, 814
HpyF3I CTNAG 3 cut(s) 278, 998, 1762
HpySE526I ACGT 2 cut(s) 916, 1306
Hsp92II CATG 5 cut(s) 224, 341, 655, 1643, 1705
HspAI GCGC 3 cut(s) 1175, 1177, 1737
Ksp22I TGATCA 2 cut(s) 67, 801
LmnI GCTCC 4 cut(s) 4, 661, 975, 1070
Lsp1109I GCAGC 3 cut(s) 19, 854, 990
LweI GCATC 3 cut(s) 253, 1033, 1375
MaeI CTAG 6 cut(s) 105, 414, 500, 1340, 1595, 1851
MaeII ACGT 2 cut(s) 916, 1306
MaeIII GTNAC 5 cut(s) 401, 1010, 1123, 1216, 1429
MboII GAAGA 7 cut(s) 71, 917, 1174, 1283, 1548, 1767, 1827
MfeI CAATTG 1 cut(s) 33
MflI RGATCY 4 cut(s) 363, 1164, 1488, 1576
MhlI GDGCHC 2 cut(s) 54, 1156
MlyI GAGTC 2 cut(s) 1224, 1339
MmeI TCCRAC 6 cut(s) 125, 555, 1030, 1264, 1306, 1702
Mph1103I ATGCAT 1 cut(s) 1390
MroXI GAANNNNTTC 1 cut(s) 273
MseI TTAA 5 cut(s) 138, 234, 452, 777, 1031
MslI CAYNNNNRTG 1 cut(s) 1376
MspA1I CMGCKG 1 cut(s) 200
MspI CCGG 2 cut(s) 747, 1808
MspR9I CCNGG 8 cut(s) 112, 557, 760, 1046, 1133, 1157, 1533, 1617
MunI CAATTG 1 cut(s) 33
Mva1269I GAATGC 1 cut(s) 493
MvaI CCWGG 8 cut(s) 112, 557, 760, 1046, 1133, 1157, 1533, 1617
MvnI CGCG 1 cut(s) 1177
MwoI GCNNNNNNNGC 3 cut(s) 318, 511, 814
NdeI CATATG 1 cut(s) 1582
NlaIII CATG 5 cut(s) 224, 341, 655, 1643, 1705
NlaIV GGNNCC 5 cut(s) 160, 657, 672, 687, 1529
NmuCI GTSAC 2 cut(s) 401, 1216
NsiI ATGCAT 1 cut(s) 1390
NspI RCATGY 1 cut(s) 1643
PaeR7I CTCGAG 1 cut(s) 1170
PagI TCATGA 1 cut(s) 220
PaqCI CACCTGC 2 cut(s) 994, 1226
PauI GCGCGC 1 cut(s) 1175
PceI AGGCCT 1 cut(s) 895
PciI ACATGT 1 cut(s) 1639
PctI GAATGC 1 cut(s) 493
PdmI GAANNNNTTC 1 cut(s) 273
PfeI GAWTC 3 cut(s) 579, 707, 1142
PinAI ACCGGT 2 cut(s) 746, 1807
PkrI GCNGC 4 cut(s) 9, 869, 980, 1007
PleI GAGTC 2 cut(s) 1223, 1339
PpsI GAGTC 2 cut(s) 1223, 1339
Ppu21I YACGTR 1 cut(s) 917
PpuMI RGGWCCY 1 cut(s) 686
PscI ACATGT 1 cut(s) 1639
Psp124BI GAGCTC 1 cut(s) 54
Psp5II RGGWCCY 1 cut(s) 686
Psp6I CCWGG 8 cut(s) 110, 555, 758, 1044, 1131, 1155, 1531, 1615
PspEI GGTNACC 1 cut(s) 401
PspGI CCWGG 8 cut(s) 110, 555, 758, 1044, 1131, 1155, 1531, 1615
PspN4I GGNNCC 5 cut(s) 160, 657, 672, 687, 1529
PspPI GGNCC 4 cut(s) 158, 562, 686, 1771
PspPPI RGGWCCY 1 cut(s) 686
PspXI VCTCGAGB 1 cut(s) 1170
PsrI GAACNNNNNNTAC 2 cut(s) 125, 157
PstI CTGCAG 1 cut(s) 847
PsuI RGATCY 4 cut(s) 363, 1164, 1488, 1576
PteI GCGCGC 1 cut(s) 1175
RsaI GTAC 2 cut(s) 143, 1767
RsaNI GTAC 2 cut(s) 142, 1766
RseI CAYNNNNRTG 1 cut(s) 1376
SacI GAGCTC 1 cut(s) 54
SaqAI TTAA 5 cut(s) 138, 234, 452, 777, 1031
SatI GCNGC 4 cut(s) 8, 868, 979, 1006
Sau96I GGNCC 4 cut(s) 158, 562, 686, 1771
SchI GAGTC 2 cut(s) 1224, 1339
ScrFI CCNGG 8 cut(s) 112, 557, 760, 1046, 1133, 1157, 1533, 1617
SduI GDGCHC 2 cut(s) 54, 1156
SfaNI GCATC 3 cut(s) 253, 1033, 1375
SfcI CTRYAG 1 cut(s) 843
Sfr274I CTCGAG 1 cut(s) 1170
SinI GGWCC 2 cut(s) 562, 686
SlaI CTCGAG 1 cut(s) 1170
SmiMI CAYNNNNRTG 1 cut(s) 1376
SmlI CTYRAG 2 cut(s) 1170, 1208
SmoI CTYRAG 2 cut(s) 1170, 1208
SpeI ACTAGT 2 cut(s) 104, 1594
SseBI AGGCCT 1 cut(s) 895
SsiI CCGC 6 cut(s) 200, 230, 310, 321, 1005, 1249
SspMI CTAG 6 cut(s) 105, 414, 500, 1340, 1595, 1851
SstI GAGCTC 1 cut(s) 54
StuI AGGCCT 1 cut(s) 895
StyD4I CCNGG 8 cut(s) 110, 555, 758, 1044, 1131, 1155, 1531, 1615
StyI CCWWGG 1 cut(s) 565
TaaI ACNGT 5 cut(s) 82, 318, 666, 1016, 1678
TaiI ACGT 2 cut(s) 919, 1309
TaqI TCGA 3 cut(s) 42, 117, 1171
TaqII GACCGA 1 cut(s) 420
TatI WGTACW 1 cut(s) 1765
TauI GCSGC 1 cut(s) 1008
TfiI GAWTC 3 cut(s) 579, 707, 1142
Tru1I TTAA 5 cut(s) 138, 234, 452, 777, 1031
Tru9I TTAA 5 cut(s) 138, 234, 452, 777, 1031
TscAI CASTG 5 cut(s) 671, 852, 1021, 1203, 1661
TseFI GTSAC 2 cut(s) 401, 1216
TseI GCWGC 3 cut(s) 7, 867, 978
Tsp45I GTSAC 2 cut(s) 401, 1216
TspDTI ATGAA 9 cut(s) 228, 326, 392, 561, 594, 1283, 1569, 1599, 1718
TspGWI ACGGA 1 cut(s) 875
TspRI CASTG 5 cut(s) 671, 852, 1021, 1203, 1661
VpaK11BI GGWCC 2 cut(s) 562, 686
XapI RAATTY 6 cut(s) 380, 480, 517, 1287, 1544, 1786
XceI RCATGY 1 cut(s) 1643
XcmI CCANNNNNNNNNTGG 2 cut(s) 108, 563
XhoI CTCGAG 1 cut(s) 1170
XmnI GAANNNNTTC 1 cut(s) 273
XspI CTAG 6 cut(s) 105, 414, 500, 1340, 1595, 1851
Zsp2I ATGCAT 1 cut(s) 1390
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.