Rmu_sc0003741.1_g000001

Protein kinase domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0003741.1
OG0001247
Physical Location & Seq
Reverse (-)
1 .. 631
631 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0003741.1_g000001.1.cds

Sequence Viewer

Length: 455 bp
atggagcagcaaattgcaaaagaaaagcctgcaatttctttcgagtatgagctctttcaagaccctaatcatctaacaactgttgtagctacactcactccaactagtccctggatcaatcctgcctcattgaactttaagtaccgaattggacggggcccctttggtgatgtatggttagcaactcatcaccagtcagcagatgattatgatgaatatcatgaggtagcagttaagatgttgcatcctttgatggaggaggacagagaaaagtttctgcacaagttcgaaaagttatttttcaagttccgcagactgtgcggtgtttgttggtttcatggtatctcaatcattgatggaaggatctgcatcgctatgaaattttatgaggaatcagttggtgaccgagttgctaggttgaagggtggaaaacttcaactttttgatgttttaag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0001101 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004842 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005769 GO:0005794 GO:0005802 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006810 GO:0006950 GO:0006952 GO:0007034 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0009719 GO:0009725 GO:0009737 GO:0009738 GO:0009755 GO:0009787 GO:0009788 GO:0009966 GO:0009968 GO:0009987 GO:0010033 GO:0010646 GO:0010648 GO:0012505 GO:0016192 GO:0016197 GO:0016301 GO:0016310 GO:0016567 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0019787 GO:0023051 GO:0023052 GO:0023057 GO:0031410 GO:0031982 GO:0031984 GO:0032446 GO:0032502 GO:0032870 GO:0032940 GO:0033993 GO:0036211 GO:0040007 GO:0042221 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043621 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044431 GO:0044444 GO:0044446 GO:0044464 GO:0045324 GO:0046903 GO:0046907 GO:0048519 GO:0048523 GO:0048583 GO:0048585 GO:0048589 GO:0050789 GO:0050794 GO:0050896 GO:0051179 GO:0051234 GO:0051641 GO:0051649 GO:0051716 GO:0065007 GO:0070647 GO:0070887 GO:0071215 GO:0071229 GO:0071310 GO:0071396 GO:0071495 GO:0071704 GO:0097305 GO:0097306 GO:0097708 GO:0098791 GO:0140096 GO:1901419 GO:1901420 GO:1901564 GO:1901700 GO:1901701 GO:1905957 GO:1905958
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DOG1 Pkinase Pkinase_Tyr

Protein Analysis

151

Amino Acids

17.64

Weight (kDa)

6.37

Isoelectric Point (pI)

35.41

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 2 cut(s) 310, 321
AclWI GGATC 2 cut(s) 122, 371
AcsI RAATTY 1 cut(s) 380
AfaI GTAC 1 cut(s) 143
AgsI TTSAA 5 cut(s) 59, 133, 304, 421, 437
AhlI ACTAGT 1 cut(s) 104
AjnI CCWGG 1 cut(s) 110
AluBI AGCT 2 cut(s) 52, 89
AluI AGCT 2 cut(s) 52, 89
Alw21I GWGCWC 1 cut(s) 54
AlwI GGATC 2 cut(s) 122, 371
AoxI GGCC 1 cut(s) 157
ApaI GGGCCC 1 cut(s) 161
ApeKI GCWGC 1 cut(s) 7
ApoI RAATTY 1 cut(s) 380
Asp700I GAANNNNTTC 1 cut(s) 273
AspS9I GGNCC 2 cut(s) 157, 158
AsuHPI GGTGA 3 cut(s) 179, 182, 413
AsuII TTCGAA 1 cut(s) 288
BaeGI GKGCMC 1 cut(s) 161
BanII GRGCYC 2 cut(s) 54, 161
Bbv12I GWGCWC 1 cut(s) 54
BbvI GCAGC 1 cut(s) 19
BccI CCATC 2 cut(s) 247, 350
BciT130I CCWGG 1 cut(s) 112
BcuI ACTAGT 1 cut(s) 104
BfaI CTAG 2 cut(s) 105, 414
BisI GCNGC 1 cut(s) 8
BlsI GCNGC 1 cut(s) 9
Bme1390I CCNGG 1 cut(s) 112
BmgT120I GGNCC 2 cut(s) 157, 158
BmiI GGNNCC 3 cut(s) 158, 159, 160
BmrFI CCNGG 1 cut(s) 112
BmsI GCATC 2 cut(s) 253, 378
Bpu14I TTCGAA 1 cut(s) 288
BsaBI GATNNNNATC 2 cut(s) 216, 368
BsaJI CCNNGG 1 cut(s) 110
BsaXI ACNNNNNCTCC 2 cut(s) 82, 112
Bse1I ACTGG 1 cut(s) 193
Bse8I GATNNNNATC 2 cut(s) 216, 368
BseBI CCWGG 1 cut(s) 112
BseDI CCNNGG 1 cut(s) 110
BseGI GGATG 1 cut(s) 244
BseJI GATNNNNATC 2 cut(s) 216, 368
BseNI ACTGG 1 cut(s) 193
BseRI GAGGAG 1 cut(s) 272
BseSI GKGCMC 1 cut(s) 161
BseXI GCAGC 1 cut(s) 19
BsgI GTGCAG 1 cut(s) 263
BshFI GGCC 1 cut(s) 159
BsiHKAI GWGCWC 1 cut(s) 54
BslFI GGGAC 1 cut(s) 93
BsmFI GGGAC 1 cut(s) 93
BsnI GGCC 1 cut(s) 159
Bsp119I TTCGAA 1 cut(s) 288
Bsp120I GGGCCC 1 cut(s) 157
Bsp1286I GDGCHC 2 cut(s) 54, 161
Bsp143I GATC 2 cut(s) 114, 363
BspACI CCGC 2 cut(s) 310, 321
BspANI GGCC 1 cut(s) 159
BspHI TCATGA 1 cut(s) 220
BspLI GGNNCC 3 cut(s) 158, 159, 160
BspPI GGATC 2 cut(s) 122, 371
BspT104I TTCGAA 1 cut(s) 288
BsrI ACTGG 1 cut(s) 193
BssECI CCNNGG 1 cut(s) 110
BssMI GATC 2 cut(s) 114, 363
Bst2UI CCWGG 1 cut(s) 112
Bst4CI ACNGT 2 cut(s) 82, 318
BstAPI GCANNNNNTGC 1 cut(s) 318
BstBI TTCGAA 1 cut(s) 288
BstC8I GCNNGC 1 cut(s) 30
BstEII GGTNACC 1 cut(s) 401
BstF5I GGATG 1 cut(s) 244
BstKTI GATC 2 cut(s) 117, 366
BstMBI GATC 2 cut(s) 114, 363
BstMWI GCNNNNNNNGC 1 cut(s) 318
BstNI CCWGG 1 cut(s) 112
BstPI GGTNACC 1 cut(s) 401
BstSCI CCNGG 1 cut(s) 110
BstSLI GKGCMC 1 cut(s) 161
BstV1I GCAGC 1 cut(s) 19
BstX2I RGATCY 1 cut(s) 363
BstYI RGATCY 1 cut(s) 363
BsuRI GGCC 1 cut(s) 159
BtgZI GCGATG 1 cut(s) 355
BtsCI GGATG 1 cut(s) 244
Cac8I GCNNGC 1 cut(s) 30
CciI TCATGA 1 cut(s) 220
Cfr13I GGNCC 2 cut(s) 157, 158
Csp6I GTAC 1 cut(s) 142
CviAII CATG 2 cut(s) 221, 338
CviJI RGCY 4 cut(s) 28, 52, 89, 159
CviKI_1 RGCY 4 cut(s) 28, 52, 89, 159
CviQI GTAC 1 cut(s) 142
DpnI GATC 2 cut(s) 116, 365
DpnII GATC 2 cut(s) 114, 363
Ecl136II GAGCTC 1 cut(s) 52
Eco24I GRGCYC 2 cut(s) 54, 161
Eco53kI GAGCTC 1 cut(s) 52
Eco91I GGTNACC 1 cut(s) 401
EcoICRI GAGCTC 1 cut(s) 52
EcoO109I RGGNCCY 2 cut(s) 157, 158
EcoO65I GGTNACC 1 cut(s) 401
EcoRII CCWGG 1 cut(s) 110
EcoT38I GRGCYC 2 cut(s) 54, 161
FaeI CATG 2 cut(s) 224, 341
FaiI YATR 7 cut(s) 48, 175, 210, 222, 339, 377, 387
FaqI GGGAC 1 cut(s) 93
FatI CATG 2 cut(s) 220, 337
Fnu4HI GCNGC 1 cut(s) 8
FokI GGATG 1 cut(s) 231
FriOI GRGCYC 2 cut(s) 54, 161
Fsp4HI GCNGC 1 cut(s) 8
FspBI CTAG 2 cut(s) 105, 414
GluI GCNGC 1 cut(s) 8
HaeIII GGCC 1 cut(s) 159
Hin1II CATG 2 cut(s) 224, 341
HinfI GANTC 1 cut(s) 392
HphI GGTGA 3 cut(s) 179, 182, 413
Hpy188III TCNNGA 2 cut(s) 59, 221
HpyAV CCTTC 2 cut(s) 354, 415
HpyCH4III ACNGT 2 cut(s) 82, 318
HpyCH4V TGCA 5 cut(s) 17, 32, 244, 280, 369
HpyF10VI GCNNNNNNNGC 1 cut(s) 318
Hsp92II CATG 2 cut(s) 224, 341
Kzo9I GATC 2 cut(s) 114, 363
LmnI GCTCC 1 cut(s) 4
LpnPI CCDG 5 cut(s) 42, 97, 124, 135, 206
Lsp1109I GCAGC 1 cut(s) 19
LweI GCATC 2 cut(s) 253, 378
MaeI CTAG 2 cut(s) 105, 414
MaeIII GTNAC 1 cut(s) 401
MalI GATC 2 cut(s) 116, 365
MboI GATC 2 cut(s) 114, 363
MflI RGATCY 1 cut(s) 363
MhlI GDGCHC 2 cut(s) 54, 161
MluCI AATT 4 cut(s) 12, 33, 147, 380
MmeI TCCRAC 1 cut(s) 125
MnlI CCTC 5 cut(s) 136, 217, 250, 253, 382
MroXI GAANNNNTTC 1 cut(s) 273
MseI TTAA 3 cut(s) 138, 234, 452
MslI CAYNNNNRTG 1 cut(s) 374
MspR9I CCNGG 1 cut(s) 112
MvaI CCWGG 1 cut(s) 112
MwoI GCNNNNNNNGC 1 cut(s) 318
NdeII GATC 2 cut(s) 114, 363
NlaIII CATG 2 cut(s) 224, 341
NlaIV GGNNCC 3 cut(s) 158, 159, 160
NmuCI GTSAC 1 cut(s) 401
NspV TTCGAA 1 cut(s) 288
PagI TCATGA 1 cut(s) 220
PdmI GAANNNNTTC 1 cut(s) 273
PfeI GAWTC 1 cut(s) 392
PkrI GCNGC 1 cut(s) 9
Psp124BI GAGCTC 1 cut(s) 54
Psp6I CCWGG 1 cut(s) 110
PspEI GGTNACC 1 cut(s) 401
PspGI CCWGG 1 cut(s) 110
PspN4I GGNNCC 3 cut(s) 158, 159, 160
PspOMI GGGCCC 1 cut(s) 157
PspPI GGNCC 2 cut(s) 157, 158
PsrI GAACNNNNNNTAC 2 cut(s) 125, 157
PsuI RGATCY 1 cut(s) 363
RsaI GTAC 1 cut(s) 143
RsaNI GTAC 1 cut(s) 142
RseI CAYNNNNRTG 1 cut(s) 374
SacI GAGCTC 1 cut(s) 54
SaqAI TTAA 3 cut(s) 138, 234, 452
SatI GCNGC 1 cut(s) 8
Sau3AI GATC 2 cut(s) 114, 363
Sau96I GGNCC 2 cut(s) 157, 158
ScrFI CCNGG 1 cut(s) 112
SduI GDGCHC 2 cut(s) 54, 161
SetI ASST 4 cut(s) 54, 91, 228, 419
SfaNI GCATC 2 cut(s) 253, 378
SfuI TTCGAA 1 cut(s) 288
SmiMI CAYNNNNRTG 1 cut(s) 374
SpeI ACTAGT 1 cut(s) 104
Sse9I AATT 4 cut(s) 12, 33, 147, 380
SsiI CCGC 2 cut(s) 310, 321
SspMI CTAG 2 cut(s) 105, 414
SstI GAGCTC 1 cut(s) 54
StyD4I CCNGG 1 cut(s) 110
TaaI ACNGT 2 cut(s) 82, 318
TaqI TCGA 2 cut(s) 42, 288
TaqII GACCGA 1 cut(s) 420
TasI AATT 4 cut(s) 12, 33, 147, 380
TfiI GAWTC 1 cut(s) 392
Tru1I TTAA 3 cut(s) 138, 234, 452
Tru9I TTAA 3 cut(s) 138, 234, 452
TseFI GTSAC 1 cut(s) 401
TseI GCWGC 1 cut(s) 7
Tsp45I GTSAC 1 cut(s) 401
TspDTI ATGAA 3 cut(s) 228, 326, 392
XapI RAATTY 1 cut(s) 380
XcmI CCANNNNNNNNNTGG 1 cut(s) 108
XmnI GAANNNNTTC 1 cut(s) 273
XspI CTAG 2 cut(s) 105, 414
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.