Rroxscaffold_7G00170200

E3 ubiquitin-protein ligase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000007
OG0001247
Physical Location & Seq
Forward (+)
10628976 .. 10633271
4296 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_7G00170200.1

Sequence Viewer

Length: 1896 bp
ATGGATAAACATGTTGTTCCTGCCCAACCGTTAGCATCATTTGAGTATGAGTACGTGGATACTAATCCTGATCGTCTAAGAACTGTTGCAGCCTCTTCAGACCAGAAAAGTGCATGGATTGAACCTGCAAAGTTGAAACTGAGACACAGGATTGGGAGGGGACCCTTTGGTGATGTCTGGTTAGCAACCCATCATCAGTCAACTGAAGATTATGATGAGTATCATGAGGTGGCTGTCAAGATGTTTCAACCAATCAAAGAGGACAACATGAAGGCTGTGTTGGATAAACTTGAAGATGTTTTTTATAAGTGTCAAGGGGTAGAAGGTCTGTGTCGGCTACATGGAACTTCAATTATCAATGGAAAGATATGCATTGTAATGAAATTATACGAGGGATCCGTTGGTGACAAAATGGCTCACCTCAAAGGAGGGAAGCTCTCACTTCTTGATGTTTTGAGGTATGGAATCACATTGGCTATGGGGATTTCCGAACTGCACTCTAGAGAGATCTTGGTTCTTAATCCCAAACCTTGTAATGTTCTTTTAAATGAAAATGACCAAGCAATTCTTGGAGATTTTGGTATTCCTTATCTATTGCTTGGCATTCCATTGGTAAGCTCAGACATGACTCGGAGGATTGGAACTCCAAACTACATGGCACCTGAACAATGGCAACCAGAAGTAAGAGGTCCAATATCCTTTGAGACTGACTCATGGGGTTTTGGGTGCGTCATTGTAGAAATGTTGACTGGTGTACGGCCTTGGTGTGGAAAATCTGTTGATGAAATACATTTTTCAGTTGTCAGAAAGCAAGAAAAACCAGACATACCTAGTGGCCTTCCTCCTGCAATTGAGAATATTCTTCTTGGCTGCTTTGAGTATGACTTACGGAGTCGTCCTTCAATAATGGACATATTGAATGCTTTCAAAGGCTTGCAGAATGCAATCAGTGACGTAGACTGGACATATGTCGGGACTAGAGCAATCACAGAGAAATCGAGCAGCACTGGTTACACTGAGTGGTTTCTTTCAAAGGATCATCTGCTGGTGGGTGACATAGTTCGTTCCAGAAAGCCACCGAACTCCTGCAAGCCTGAAAACATGGATGTTCCGGAAGGCACAGTGGTGGGTATAGAACATGATACGGAGCAACATGGGTTTGTCTTGGTGAGGGTCCATGGCATCCATGACCCATTGAGGGTTCATGCTTCAACTCTGGAGCGGGTTACTTTTGGCTTGGCAGCTGGTGACTGGGTACGCTTGAAGAAGGAAGACAAGAAACACTCGCCAGTAGGTATTCTCCATTCCATCAATCGAGACGGTAGTGTAGCTGTTGGATTTATAGGGTTGGAAACTCTTTGGAAGGGAACTTCTTCAGAGTTTCAGATGGCAGAATCTTATTGTGTGGGTCAATTTGTTAGGCTGAAAGCCAATGTTCTGAGTCCTCGATTCGAATGGCCTCGTAAGACGGGAGGGAAATGGGCTACTGGTAAGATATGGTGGATCCTACCAAATGGGTGCCTTGTTGTGAAGTTCCCAGGAATACTGACTTTGGGGCATGAAAACTCAACATTTGTGGCTGATCCTGCAGAGGTCGAATCAGTTACATTTGAGACTTGTCCAGGAATGGTGAAGAAGTACCAACATCTTGAGGATTTTCATTGGGCAGTGAGGCCAATTCTGATTGCATTGGGCCTATTTACAGCCATGAAGATGGGCATCTGTATTGGTACAAAAATTGGGAAGTGTAAAGCGAAGAAACGATGGAGTGCAGCTATACAGGATGAGAGTCACCATTTGGATGGTCAGAATTCAGGAAATCCAGCTTGGAAGAATCCGGTGACAAAGATCCTTTTCAGAGAAGGTGGCAGTTCTGCCACAGGTCTTGCTCGGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0001101 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004842 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005769 GO:0005794 GO:0005802 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006810 GO:0006950 GO:0006952 GO:0007034 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0009719 GO:0009725 GO:0009737 GO:0009738 GO:0009755 GO:0009787 GO:0009788 GO:0009966 GO:0009968 GO:0009987 GO:0010033 GO:0010646 GO:0010648 GO:0012505 GO:0016192 GO:0016197 GO:0016301 GO:0016310 GO:0016567 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0019787 GO:0023051 GO:0023052 GO:0023057 GO:0031410 GO:0031982 GO:0031984 GO:0032446 GO:0032502 GO:0032870 GO:0032940 GO:0033993 GO:0036211 GO:0040007 GO:0042221 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043621 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044431 GO:0044444 GO:0044446 GO:0044464 GO:0045324 GO:0046903 GO:0046907 GO:0048519 GO:0048523 GO:0048583 GO:0048585 GO:0048589 GO:0050789 GO:0050794 GO:0050896 GO:0051179 GO:0051234 GO:0051641 GO:0051649 GO:0051716 GO:0065007 GO:0070647 GO:0070887 GO:0071215 GO:0071229 GO:0071310 GO:0071396 GO:0071495 GO:0071704 GO:0097305 GO:0097306 GO:0097708 GO:0098791 GO:0140096 GO:1901419 GO:1901420 GO:1901564 GO:1901700 GO:1901701 GO:1905957 GO:1905958
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Pkinase_Tyr

Protein Analysis

631

Amino Acids

70.32

Weight (kDa)

7.07

Isoelectric Point (pI)

33.08

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PK_Tyr_Ser-Thr PF07714 45 - 308 5.1e-29 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 48 - 307 4.6e-26 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 306
Acc36I ACCTGC 1 cut(s) 133
AccB1I GGYRCC 2 cut(s) 658, 1518
AccBSI CCGCTC 1 cut(s) 1222
AccI GTMKAC 1 cut(s) 957
AccIII TCCGGA 1 cut(s) 1111
AciI CCGC 1 cut(s) 1222
AclWI GGATC 7 cut(s) 390, 403, 1044, 1498, 1511, 1577, 1843
AcsI RAATTY 1 cut(s) 1810
AcuI CTGAAG 3 cut(s) 81, 225, 1359
AdeI CACNNNGTG 1 cut(s) 1020
AfaI GTAC 5 cut(s) 53, 756, 1257, 1640, 1732
AfiI CCNNNNNNNGG 2 cut(s) 767, 1198
AflIII ACRYGT 1 cut(s) 10
AjnI CCWGG 2 cut(s) 1537, 1621
AjuI GAANNNNNNNTTGG 4 cut(s) 263, 295, 1810, 1842
AleI CACNNNNGTG 1 cut(s) 1124
AluBI AGCT 6 cut(s) 436, 618, 1244, 1331, 1775, 1826
AluI AGCT 6 cut(s) 436, 618, 1244, 1331, 1775, 1826
Alw26I GTCTC 4 cut(s) 136, 698, 1311, 1607
AlwI GGATC 7 cut(s) 390, 403, 1044, 1498, 1511, 1577, 1843
Aor13HI TCCGGA 1 cut(s) 1111
AoxI GGCC 5 cut(s) 758, 835, 1457, 1673, 1693
ApeKI GCWGC 5 cut(s) 89, 870, 1002, 1241, 1772
ApoI RAATTY 1 cut(s) 1810
Asp700I GAANNNNTTC 2 cut(s) 923, 1372
AspS9I GGNCC 4 cut(s) 161, 689, 1174, 1693
AsuHPI GGTGA 9 cut(s) 182, 410, 416, 1064, 1180, 1259, 1642, 1784, 1852
AsuII TTCGAA 1 cut(s) 1452
AvaII GGWCC 3 cut(s) 161, 689, 1174
BamHI GGATCC 2 cut(s) 395, 1503
BanI GGYRCC 2 cut(s) 658, 1518
BbsI GAAGAC 1 cut(s) 1278
BbvI GCAGC 5 cut(s) 101, 857, 1014, 1253, 1784
BccI CCATC 6 cut(s) 198, 1316, 1381, 1708, 1758, 1796
BceAI ACGGC 1 cut(s) 773
BciT130I CCWGG 2 cut(s) 1539, 1623
BciVI GTATCC 1 cut(s) 52
BcoDI GTCTC 4 cut(s) 136, 698, 1311, 1607
BfaI CTAG 3 cut(s) 501, 831, 978
BfmI CTRYAG 1 cut(s) 1587
BfuAI ACCTGC 1 cut(s) 133
BfuI GTATCC 1 cut(s) 52
BglII AGATCT 1 cut(s) 507
BisI GCNGC 5 cut(s) 90, 871, 1003, 1242, 1773
BlsI GCNGC 5 cut(s) 91, 872, 1004, 1243, 1774
Bme1390I CCNGG 2 cut(s) 1539, 1623
Bme18I GGWCC 3 cut(s) 161, 689, 1174
BmgT120I GGNCC 4 cut(s) 161, 689, 1174, 1693
BmiI GGNNCC 7 cut(s) 162, 163, 397, 660, 1175, 1505, 1520
BmrFI CCNGG 2 cut(s) 1539, 1623
BmrI ACTGGG 1 cut(s) 1261
BmsI GCATC 3 cut(s) 44, 1191, 1728
BmuI ACTGGG 1 cut(s) 1261
BoxI GACNNNNGTC 1 cut(s) 968
BpiI GAAGAC 1 cut(s) 1278
BplI GAGNNNNNCTC 4 cut(s) 420, 452, 695, 727
BpmI CTGGAG 1 cut(s) 1238
Bpu14I TTCGAA 1 cut(s) 1452
BpuEI CTTGAG 1 cut(s) 1670
BsaAI YACGTR 1 cut(s) 55
BsaBI GATNNNNATC 3 cut(s) 63, 219, 1718
BsaJI CCNNGG 3 cut(s) 761, 1177, 1537
BsaWI WCCGGW 2 cut(s) 1111, 1837
Bsc4I CCNNNNNNNGG 2 cut(s) 767, 1198
Bse1I ACTGG 6 cut(s) 754, 965, 1012, 1256, 1289, 1492
Bse8I GATNNNNATC 3 cut(s) 63, 219, 1718
BseAI TCCGGA 1 cut(s) 1111
BseBI CCWGG 2 cut(s) 1539, 1623
BseDI CCNNGG 3 cut(s) 761, 1177, 1537
BseGI GGATG 4 cut(s) 1111, 1182, 1789, 1807
BseJI GATNNNNATC 3 cut(s) 63, 219, 1718
BseLI CCNNNNNNNGG 2 cut(s) 767, 1198
BseMII CTCAG 4 cut(s) 131, 633, 1008, 1430
BseNI ACTGG 6 cut(s) 754, 965, 1012, 1256, 1289, 1492
BseXI GCAGC 5 cut(s) 101, 857, 1014, 1253, 1784
BsgI GTGCAG 2 cut(s) 479, 1791
BshFI GGCC 5 cut(s) 760, 837, 1459, 1675, 1695
BshNI GGYRCC 2 cut(s) 658, 1518
BsiSI CCGG 2 cut(s) 1112, 1838
BslFI GGGAC 2 cut(s) 174, 988
BslI CCNNNNNNNGG 2 cut(s) 767, 1198
BsmAI GTCTC 4 cut(s) 136, 698, 1311, 1607
BsmBI CGTCTC 1 cut(s) 1311
BsmFI GGGAC 2 cut(s) 174, 988
BsmI GAATGC 3 cut(s) 603, 925, 946
BsnI GGCC 5 cut(s) 760, 837, 1459, 1675, 1695
Bsp119I TTCGAA 1 cut(s) 1452
Bsp13I TCCGGA 1 cut(s) 1111
Bsp143I GATC 7 cut(s) 70, 395, 507, 1036, 1503, 1582, 1848
Bsp19I CCATGG 1 cut(s) 1177
BspACI CCGC 1 cut(s) 1222
BspANI GGCC 5 cut(s) 760, 837, 1459, 1675, 1695
BspCNI CTCAG 4 cut(s) 132, 632, 1009, 1431
BspEI TCCGGA 1 cut(s) 1111
BspHI TCATGA 1 cut(s) 223
BspLI GGNNCC 7 cut(s) 162, 163, 397, 660, 1175, 1505, 1520
BspMAI CTGCAG 1 cut(s) 1591
BspMI ACCTGC 1 cut(s) 133
BspPI GGATC 7 cut(s) 390, 403, 1044, 1498, 1511, 1577, 1843
BspT104I TTCGAA 1 cut(s) 1452
BspT107I GGYRCC 2 cut(s) 658, 1518
BsrBI CCGCTC 1 cut(s) 1222
BsrI ACTGG 6 cut(s) 754, 965, 1012, 1256, 1289, 1492
BssECI CCNNGG 3 cut(s) 761, 1177, 1537
BssMI GATC 7 cut(s) 70, 395, 507, 1036, 1503, 1582, 1848
BssT1I CCWWGG 2 cut(s) 761, 1177
Bst2UI CCWGG 2 cut(s) 1539, 1623
Bst4CI ACNGT 4 cut(s) 30, 85, 1123, 1322
Bst6I CTCTTC 1 cut(s) 100
BstBAI YACGTR 1 cut(s) 55
BstBI TTCGAA 1 cut(s) 1452
BstC8I GCNNGC 2 cut(s) 935, 1091
BstDEI CTNAG 5 cut(s) 77, 140, 619, 1017, 1439
BstDSI CCRYGG 1 cut(s) 1177
BstF5I GGATG 4 cut(s) 1111, 1182, 1789, 1807
BstKTI GATC 7 cut(s) 73, 398, 510, 1039, 1506, 1585, 1851
BstMAI GTCTC 4 cut(s) 136, 698, 1311, 1607
BstMBI GATC 7 cut(s) 70, 395, 507, 1036, 1503, 1582, 1848
BstMWI GCNNNNNNNGC 1 cut(s) 1586
BstNI CCWGG 2 cut(s) 1539, 1623
BstNSI RCATGY 1 cut(s) 14
BstPAI GACNNNNGTC 1 cut(s) 968
BstSCI CCNGG 2 cut(s) 1537, 1621
BstSFI CTRYAG 1 cut(s) 1587
BstV1I GCAGC 5 cut(s) 101, 857, 1014, 1253, 1784
BstV2I GAAGAC 1 cut(s) 1278
BstX2I RGATCY 4 cut(s) 395, 507, 1503, 1848
BstXI CCANNNNNNTGG 2 cut(s) 1714, 1802
BstYI RGATCY 4 cut(s) 395, 507, 1503, 1848
BsuI GTATCC 1 cut(s) 52
BsuRI GGCC 5 cut(s) 760, 837, 1459, 1675, 1695
BtgI CCRYGG 1 cut(s) 1177
BtsCI GGATG 4 cut(s) 1111, 1182, 1789, 1807
BtsI GCAGTG 1 cut(s) 1674
BtsIMutI CAGTG 5 cut(s) 955, 1005, 1014, 1128, 1674
BveI ACCTGC 1 cut(s) 133
Cac8I GCNNGC 2 cut(s) 935, 1091
CciI TCATGA 1 cut(s) 223
Cfr13I GGNCC 4 cut(s) 161, 689, 1174, 1693
CseI GACGC 1 cut(s) 718
Csp6I GTAC 5 cut(s) 52, 755, 1256, 1639, 1731
CspCI CAANNNNNGTGG 3 cut(s) 1557, 1592, 1867
CviQI GTAC 5 cut(s) 52, 755, 1256, 1639, 1731
DdeI CTNAG 5 cut(s) 77, 140, 619, 1017, 1439
DpnI GATC 7 cut(s) 72, 397, 509, 1038, 1505, 1584, 1850
DpnII GATC 7 cut(s) 70, 395, 507, 1036, 1503, 1582, 1848
DraI TTTAAA 1 cut(s) 546
DraIII CACNNNGTG 1 cut(s) 1020
Eam1104I CTCTTC 1 cut(s) 100
EarI CTCTTC 1 cut(s) 100
Eco130I CCWWGG 2 cut(s) 761, 1177
Eco47I GGWCC 3 cut(s) 161, 689, 1174
Eco57I CTGAAG 3 cut(s) 81, 225, 1359
EcoO109I RGGNCCY 1 cut(s) 161
EcoRI GAATTC 1 cut(s) 1810
EcoRII CCWGG 2 cut(s) 1537, 1621
EcoT14I CCWWGG 2 cut(s) 761, 1177
EcoT22I ATGCAT 1 cut(s) 374
ErhI CCWWGG 2 cut(s) 761, 1177
Esp3I CGTCTC 1 cut(s) 1311
FalI AAGNNNNNCTT 2 cut(s) 552, 584
FaqI GGGAC 2 cut(s) 174, 988
FauI CCCGC 1 cut(s) 1215
FauNDI CATATG 1 cut(s) 967
FblI GTMKAC 1 cut(s) 957
Fnu4HI GCNGC 5 cut(s) 90, 871, 1003, 1242, 1773
FokI GGATG 4 cut(s) 1118, 1169, 1796, 1814
Fsp4HI GCNGC 5 cut(s) 90, 871, 1003, 1242, 1773
FspBI CTAG 3 cut(s) 501, 831, 978
GluI GCNGC 5 cut(s) 90, 871, 1003, 1242, 1773
GsuI CTGGAG 1 cut(s) 1238
HaeIII GGCC 5 cut(s) 760, 837, 1459, 1675, 1695
HapII CCGG 2 cut(s) 1112, 1838
HgaI GACGC 1 cut(s) 718
HincII GTYRAC 2 cut(s) 201, 747
HindII GTYRAC 2 cut(s) 201, 747
HpaII CCGG 2 cut(s) 1112, 1838
HphI GGTGA 9 cut(s) 182, 410, 416, 1064, 1180, 1259, 1642, 1784, 1852
Hpy166II GTNNAC 4 cut(s) 201, 747, 755, 958
Hpy8I GTNNAC 4 cut(s) 201, 747, 755, 958
HpyAV CCTTC 8 cut(s) 265, 317, 848, 909, 1109, 1261, 1357, 1856
HpyCH4III ACNGT 4 cut(s) 30, 85, 1123, 1322
HpyCH4IV ACGT 2 cut(s) 54, 954
HpyF10VI GCNNNNNNNGC 1 cut(s) 1586
HpyF3I CTNAG 5 cut(s) 77, 140, 619, 1017, 1439
HpySE526I ACGT 2 cut(s) 54, 954
KflI GGGWCCC 1 cut(s) 161
Kpn2I TCCGGA 1 cut(s) 1111
Kzo9I GATC 7 cut(s) 70, 395, 507, 1036, 1503, 1582, 1848
LmnI GCTCC 2 cut(s) 1147, 1219
Lsp1109I GCAGC 5 cut(s) 101, 857, 1014, 1253, 1784
LweI GCATC 3 cut(s) 44, 1191, 1728
MaeI CTAG 3 cut(s) 501, 831, 978
MaeII ACGT 2 cut(s) 54, 954
MaeIII GTNAC 9 cut(s) 404, 950, 1010, 1052, 1225, 1247, 1603, 1790, 1840
MalI GATC 7 cut(s) 72, 397, 509, 1038, 1505, 1584, 1850
MbiI CCGCTC 1 cut(s) 1222
MboI GATC 7 cut(s) 70, 395, 507, 1036, 1503, 1582, 1848
MfeI CAATTG 1 cut(s) 849
MflI RGATCY 4 cut(s) 395, 507, 1503, 1848
MluCI AATT 8 cut(s) 351, 383, 564, 849, 1412, 1677, 1737, 1810
MlyI GAGTC 5 cut(s) 622, 704, 901, 1450, 1798
MmeI TCCRAC 3 cut(s) 261, 1315, 1329
Mph1103I ATGCAT 1 cut(s) 374
MroI TCCGGA 1 cut(s) 1111
MroXI GAANNNNTTC 2 cut(s) 923, 1372
MseI TTAA 2 cut(s) 519, 545
MslI CAYNNNNRTG 4 cut(s) 377, 1124, 1712, 1800
MspA1I CMGCKG 1 cut(s) 1244
MspI CCGG 2 cut(s) 1112, 1838
MspR9I CCNGG 2 cut(s) 1539, 1623
MunI CAATTG 1 cut(s) 849
Mva1269I GAATGC 3 cut(s) 603, 925, 946
MvaI CCWGG 2 cut(s) 1539, 1623
MwoI GCNNNNNNNGC 1 cut(s) 1586
NcoI CCATGG 1 cut(s) 1177
NdeI CATATG 1 cut(s) 967
NdeII GATC 7 cut(s) 70, 395, 507, 1036, 1503, 1582, 1848
NlaIV GGNNCC 7 cut(s) 162, 163, 397, 660, 1175, 1505, 1520
NmuCI GTSAC 6 cut(s) 404, 950, 1052, 1247, 1790, 1840
NsiI ATGCAT 1 cut(s) 374
NspI RCATGY 1 cut(s) 14
NspV TTCGAA 1 cut(s) 1452
OliI CACNNNNGTG 1 cut(s) 1124
PagI TCATGA 1 cut(s) 223
PciI ACATGT 1 cut(s) 10
PcsI WCGNNNNNNNCGW 1 cut(s) 396
PctI GAATGC 3 cut(s) 603, 925, 946
PdmI GAANNNNTTC 2 cut(s) 923, 1372
PfeI GAWTC 5 cut(s) 465, 1394, 1449, 1598, 1834
PfoI TCCNGGA 1 cut(s) 1621
PkrI GCNGC 5 cut(s) 91, 872, 1004, 1243, 1774
PleI GAGTC 5 cut(s) 622, 704, 900, 1449, 1797
PpsI GAGTC 5 cut(s) 622, 704, 900, 1449, 1797
Ppu21I YACGTR 1 cut(s) 55
PpuMI RGGWCCY 1 cut(s) 161
PscI ACATGT 1 cut(s) 10
PshAI GACNNNNGTC 1 cut(s) 968
PsiI TTATAA 1 cut(s) 306
Psp5II RGGWCCY 1 cut(s) 161
Psp6I CCWGG 2 cut(s) 1537, 1621
PspGI CCWGG 2 cut(s) 1537, 1621
PspN4I GGNNCC 7 cut(s) 162, 163, 397, 660, 1175, 1505, 1520
PspPI GGNCC 4 cut(s) 161, 689, 1174, 1693
PspPPI RGGWCCY 1 cut(s) 161
PstI CTGCAG 1 cut(s) 1591
PsuI RGATCY 4 cut(s) 395, 507, 1503, 1848
PvuII CAGCTG 1 cut(s) 1244
RsaI GTAC 5 cut(s) 53, 756, 1257, 1640, 1732
RsaNI GTAC 5 cut(s) 52, 755, 1256, 1639, 1731
RseI CAYNNNNRTG 4 cut(s) 377, 1124, 1712, 1800
SaqAI TTAA 2 cut(s) 519, 545
SatI GCNGC 5 cut(s) 90, 871, 1003, 1242, 1773
Sau3AI GATC 7 cut(s) 70, 395, 507, 1036, 1503, 1582, 1848
Sau96I GGNCC 4 cut(s) 161, 689, 1174, 1693
SchI GAGTC 5 cut(s) 622, 704, 901, 1450, 1798
ScrFI CCNGG 2 cut(s) 1539, 1623
SfaNI GCATC 3 cut(s) 44, 1191, 1728
SfcI CTRYAG 1 cut(s) 1587
SfuI TTCGAA 1 cut(s) 1452
SinI GGWCC 3 cut(s) 161, 689, 1174
SmiMI CAYNNNNRTG 4 cut(s) 377, 1124, 1712, 1800
SmlI CTYRAG 1 cut(s) 1649
SmoI CTYRAG 1 cut(s) 1649
Sse9I AATT 8 cut(s) 351, 383, 564, 849, 1412, 1677, 1737, 1810
SsiI CCGC 1 cut(s) 1222
SspI AATATT 1 cut(s) 859
SspMI CTAG 3 cut(s) 501, 831, 978
StyD4I CCNGG 2 cut(s) 1537, 1621
StyI CCWWGG 2 cut(s) 761, 1177
TaaI ACNGT 4 cut(s) 30, 85, 1123, 1322
TaiI ACGT 2 cut(s) 57, 957
TaqI TCGA 5 cut(s) 998, 1315, 1447, 1452, 1596
TasI AATT 8 cut(s) 351, 383, 564, 849, 1412, 1677, 1737, 1810
TfiI GAWTC 5 cut(s) 465, 1394, 1449, 1598, 1834
Tru1I TTAA 2 cut(s) 519, 545
Tru9I TTAA 2 cut(s) 519, 545
TscAI CASTG 5 cut(s) 955, 1012, 1021, 1128, 1674
TseFI GTSAC 6 cut(s) 404, 950, 1052, 1247, 1790, 1840
TseI GCWGC 5 cut(s) 89, 870, 1002, 1241, 1772
Tsp45I GTSAC 6 cut(s) 404, 950, 1052, 1247, 1790, 1840
TspDTI ATGAA 8 cut(s) 284, 395, 564, 798, 1193, 1575, 1649, 1724
TspGWI ACGGA 3 cut(s) 388, 904, 1160
TspRI CASTG 5 cut(s) 955, 1012, 1021, 1128, 1674
VpaK11BI GGWCC 3 cut(s) 161, 689, 1174
XapI RAATTY 1 cut(s) 1810
XbaI TCTAGA 1 cut(s) 500
XceI RCATGY 1 cut(s) 14
XcmI CCANNNNNNNNNTGG 1 cut(s) 566
XmiI GTMKAC 1 cut(s) 957
XmnI GAANNNNTTC 2 cut(s) 923, 1372
XspI CTAG 3 cut(s) 501, 831, 978
Zsp2I ATGCAT 1 cut(s) 374
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.