Rh6CG400300

E3 ubiquitin-protein ligase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6C
OG0001247
Physical Location & Seq
Reverse (-)
58719242 .. 58726693
7452 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6CG400300.1

Sequence Viewer

Length: 1875 bp
ATGGATAAACATGTTGTTCCTGCTCAACCGTTAGCATCATTTGAGTATGAGTACGTGGATACTAATCCTGATCGTCTAAGAACTGTTGTAGCCTCTTCAGACCAGAAAAGTGCATGGATTGAACCTGCAAAGTTGAAACTGAGACACAGGATTGGGAGGGGACCCTTTGGTGATGTCTGGTTAGCAACCCATCATCAGTCAACTGAAGATTATGATGAGTATCATGAGGTGGCTGTCAAGATGTTTCAACCAATCAAAGAGGACAACATGAAGGCTGTGTTGGATAAACTTGAAGATGTTTTTTATAAGTGTCAAGGGGTAGAAGGTCTGTGTCGGCTACATGGAACTTCAATTATCAATGGAAAGGTATGCATTGTAATGAAATTATATGAGGGATCCATCGGTGACAAAATGGCTCACCTCAAAGGAGGGAAGCTCTCACTTCTTGATGTTTTGAGGTATGGAATCACATTGGCTATGGGGATTTCCGAACTGCACTCTAGAGAGATCTTGGTTCTTAATCTCAAACCTTGTAATGTTCTTTTAAATGAAAATGACCAAGCAATTCTTGGAGATTTTGGCATTCCATTGGTAAGCTCAGACATGACTCGGAGGATTGGAACTCCAAACTACATGGCACCTGAACAGTGGCAACCAGAAGTAAGAGGTCCAATATCCTTTGAGACTGACTCATGGGGTTTTGGGTGTGTCATTGTAGAAATGTTGACTGGTGTACGGCCTTGGTGTGGAAAATCTGTTGATGAAATACATTTTTCAGTTGTCAGAAAGCAAGAAAAACCAGACATACCTAGTGGCCTTCCTCCTGCAATTGAGAATATTCTTCTTGGCTGCTTTGAGTATGACTTACGGAGTCGTCCTTCAATAATGGACATATTGAATGCTTTCAAAAGCTTGCAGAATGCAGTCAGTGACGTAGACTGGACATATGTCGGGAATAGAGCAATCACAGAGAAATCGAGTAGCACTGGTTACACTGAGTGGTTTCTTTCAAAGGATCATCTGCTGGTGGGTGACATAGTTCGTTCCAGAAAGTCACCAAACTCCTGCAAGCCTGAAAACATGGATGTTCCGGAAGGCACAGTGGTGGGTATAGAACATGATACAGAGCAACATGGGTATGTCTTGGTGAGGGTCCATGGCATCCATGACCCATTGAGGGTTCATGCTTCAACTCTGGAGCGGGTTACTTTTGGCTTGGCAGCTGGGGACTGGGTACGCTTGAAGCAGGAAGACAAGAAACACTCGCCAGTAGGTATTCTCCATTCCATCAATCGAGACGGTAGTGTAGCTGTTGGATTTATAGGGTTGGAAACTCTTTGGAAGGGAACTTCTTCAGAGTTTCAGATGGCAGAATCTTATTGTGTGGGTCAATTTGTTCGGCTGAAAGCCAATGTTCTGAGTCCTCGATTCGAATGGCCTCGTAAGACGGGAGGGAAATGGGCTACTGGTAAGATATGGTGGATCCTACCAAATGGGTGCCTTGTTGTGAAGTTCCCAGGAATACTGACTTTGGGGCATGAAAACTCAACATTTGTGGCTGATCCTGCAGAGGTCGAATCAGTTACATTTGAGACTTGTCCAGGAATGGTGAAGAAGTACCAACATCTTGAGGATTTTCATTGGGCAGTGAGGCCAATTCTGATTGCATTGGGCCTATTTACAGCTATGAAGATGGGCATCTGTATTGGTACAAAAATTGGGAAGTGTAAAGCGAAGAAACGATGGAGTGCAGCTATACAGGATGAGAGTCACCATTTGGATGGTCAGAATTCAGGAAATCCAGCTTGGAAGAATCCGGTGACAAAGATCCTTTTCAGAGAAGGTGGCAGTTCTGCCACAGGTCTTGCTCGGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0001101 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004842 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005769 GO:0005794 GO:0005802 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006810 GO:0006950 GO:0006952 GO:0007034 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0009719 GO:0009725 GO:0009737 GO:0009738 GO:0009755 GO:0009787 GO:0009788 GO:0009966 GO:0009968 GO:0009987 GO:0010033 GO:0010646 GO:0010648 GO:0012505 GO:0016192 GO:0016197 GO:0016301 GO:0016310 GO:0016567 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0019787 GO:0023051 GO:0023052 GO:0023057 GO:0031410 GO:0031982 GO:0031984 GO:0032446 GO:0032502 GO:0032870 GO:0032940 GO:0033993 GO:0036211 GO:0040007 GO:0042221 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043621 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044431 GO:0044444 GO:0044446 GO:0044464 GO:0045324 GO:0046903 GO:0046907 GO:0048519 GO:0048523 GO:0048583 GO:0048585 GO:0048589 GO:0050789 GO:0050794 GO:0050896 GO:0051179 GO:0051234 GO:0051641 GO:0051649 GO:0051716 GO:0065007 GO:0070647 GO:0070887 GO:0071215 GO:0071229 GO:0071310 GO:0071396 GO:0071495 GO:0071704 GO:0097305 GO:0097306 GO:0097708 GO:0098791 GO:0140096 GO:1901419 GO:1901420 GO:1901564 GO:1901700 GO:1901701 GO:1905957 GO:1905958
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Pkinase_Tyr

Protein Analysis

624

Amino Acids

69.63

Weight (kDa)

6.89

Isoelectric Point (pI)

34.77

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PK_Tyr_Ser-Thr PF07714 45 - 301 2.3e-30 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 48 - 300 5e-28 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 306
Acc36I ACCTGC 1 cut(s) 133
AccB1I GGYRCC 2 cut(s) 637, 1497
AccBSI CCGCTC 1 cut(s) 1201
AccI GTMKAC 1 cut(s) 936
AccIII TCCGGA 1 cut(s) 1090
AciI CCGC 1 cut(s) 1201
AclWI GGATC 7 cut(s) 390, 403, 1023, 1477, 1490, 1556, 1822
AcsI RAATTY 1 cut(s) 1789
AcuI CTGAAG 3 cut(s) 81, 225, 1338
AdeI CACNNNGTG 1 cut(s) 999
AfaI GTAC 5 cut(s) 53, 735, 1236, 1619, 1711
AfiI CCNNNNNNNGG 2 cut(s) 746, 1177
AflIII ACRYGT 1 cut(s) 10
AjnI CCWGG 2 cut(s) 1516, 1600
AjuI GAANNNNNNNTTGG 4 cut(s) 263, 295, 1789, 1821
AleI CACNNNNGTG 1 cut(s) 1103
AluBI AGCT 8 cut(s) 436, 597, 912, 1223, 1310, 1685, 1754, 1805
AluI AGCT 8 cut(s) 436, 597, 912, 1223, 1310, 1685, 1754, 1805
Alw26I GTCTC 4 cut(s) 136, 677, 1290, 1586
AlwI GGATC 7 cut(s) 390, 403, 1023, 1477, 1490, 1556, 1822
Aor13HI TCCGGA 1 cut(s) 1090
AoxI GGCC 5 cut(s) 737, 814, 1436, 1652, 1672
ApeKI GCWGC 3 cut(s) 849, 1220, 1751
ApoI RAATTY 1 cut(s) 1789
Asp700I GAANNNNTTC 2 cut(s) 902, 1351
AspS9I GGNCC 4 cut(s) 161, 668, 1153, 1672
AsuHPI GGTGA 9 cut(s) 182, 410, 416, 1043, 1047, 1159, 1621, 1763, 1831
AsuII TTCGAA 1 cut(s) 1431
AvaII GGWCC 3 cut(s) 161, 668, 1153
BamHI GGATCC 2 cut(s) 395, 1482
BanI GGYRCC 2 cut(s) 637, 1497
BbsI GAAGAC 1 cut(s) 1257
BbvI GCAGC 3 cut(s) 836, 1232, 1763
BccI CCATC 7 cut(s) 198, 407, 1295, 1360, 1687, 1737, 1775
BceAI ACGGC 1 cut(s) 752
BciT130I CCWGG 2 cut(s) 1518, 1602
BciVI GTATCC 1 cut(s) 52
BcoDI GTCTC 4 cut(s) 136, 677, 1290, 1586
BfaI CTAG 2 cut(s) 501, 810
BfmI CTRYAG 1 cut(s) 1566
BfuAI ACCTGC 1 cut(s) 133
BfuI GTATCC 1 cut(s) 52
BglII AGATCT 1 cut(s) 507
BisI GCNGC 3 cut(s) 850, 1221, 1752
BlsI GCNGC 3 cut(s) 851, 1222, 1753
Bme1390I CCNGG 2 cut(s) 1518, 1602
Bme18I GGWCC 3 cut(s) 161, 668, 1153
BmgT120I GGNCC 4 cut(s) 161, 668, 1153, 1672
BmiI GGNNCC 7 cut(s) 162, 163, 397, 639, 1154, 1484, 1499
BmrFI CCNGG 2 cut(s) 1518, 1602
BmrI ACTGGG 1 cut(s) 1240
BmsI GCATC 3 cut(s) 44, 1170, 1707
BmuI ACTGGG 1 cut(s) 1240
BoxI GACNNNNGTC 1 cut(s) 947
BpiI GAAGAC 1 cut(s) 1257
BplI GAGNNNNNCTC 4 cut(s) 420, 452, 674, 706
BpmI CTGGAG 1 cut(s) 1217
Bpu14I TTCGAA 1 cut(s) 1431
BpuEI CTTGAG 1 cut(s) 1649
BsaAI YACGTR 1 cut(s) 55
BsaBI GATNNNNATC 3 cut(s) 63, 219, 1697
BsaJI CCNNGG 3 cut(s) 740, 1156, 1516
BsaWI WCCGGW 2 cut(s) 1090, 1816
Bsc4I CCNNNNNNNGG 2 cut(s) 746, 1177
Bse1I ACTGG 6 cut(s) 733, 944, 991, 1235, 1268, 1471
Bse8I GATNNNNATC 3 cut(s) 63, 219, 1697
BseAI TCCGGA 1 cut(s) 1090
BseBI CCWGG 2 cut(s) 1518, 1602
BseDI CCNNGG 3 cut(s) 740, 1156, 1516
BseGI GGATG 4 cut(s) 1090, 1161, 1768, 1786
BseJI GATNNNNATC 3 cut(s) 63, 219, 1697
BseLI CCNNNNNNNGG 2 cut(s) 746, 1177
BseMII CTCAG 4 cut(s) 131, 612, 987, 1409
BseNI ACTGG 6 cut(s) 733, 944, 991, 1235, 1268, 1471
BseXI GCAGC 3 cut(s) 836, 1232, 1763
BseYI CCCAGC 1 cut(s) 1223
BsgI GTGCAG 2 cut(s) 479, 1770
BshFI GGCC 5 cut(s) 739, 816, 1438, 1654, 1674
BshNI GGYRCC 2 cut(s) 637, 1497
BsiSI CCGG 2 cut(s) 1091, 1817
BslFI GGGAC 2 cut(s) 174, 1241
BslI CCNNNNNNNGG 2 cut(s) 746, 1177
BsmAI GTCTC 4 cut(s) 136, 677, 1290, 1586
BsmBI CGTCTC 1 cut(s) 1290
BsmFI GGGAC 2 cut(s) 174, 1241
BsmI GAATGC 3 cut(s) 582, 904, 925
BsnI GGCC 5 cut(s) 739, 816, 1438, 1654, 1674
Bsp119I TTCGAA 1 cut(s) 1431
Bsp13I TCCGGA 1 cut(s) 1090
Bsp143I GATC 7 cut(s) 70, 395, 507, 1015, 1482, 1561, 1827
Bsp19I CCATGG 1 cut(s) 1156
BspACI CCGC 1 cut(s) 1201
BspANI GGCC 5 cut(s) 739, 816, 1438, 1654, 1674
BspCNI CTCAG 4 cut(s) 132, 611, 988, 1410
BspEI TCCGGA 1 cut(s) 1090
BspHI TCATGA 1 cut(s) 223
BspLI GGNNCC 7 cut(s) 162, 163, 397, 639, 1154, 1484, 1499
BspMAI CTGCAG 1 cut(s) 1570
BspMI ACCTGC 1 cut(s) 133
BspPI GGATC 7 cut(s) 390, 403, 1023, 1477, 1490, 1556, 1822
BspT104I TTCGAA 1 cut(s) 1431
BspT107I GGYRCC 2 cut(s) 637, 1497
BsrBI CCGCTC 1 cut(s) 1201
BsrI ACTGG 6 cut(s) 733, 944, 991, 1235, 1268, 1471
BssECI CCNNGG 3 cut(s) 740, 1156, 1516
BssMI GATC 7 cut(s) 70, 395, 507, 1015, 1482, 1561, 1827
BssT1I CCWWGG 2 cut(s) 740, 1156
Bst2UI CCWGG 2 cut(s) 1518, 1602
Bst4CI ACNGT 5 cut(s) 30, 85, 648, 1102, 1301
Bst6I CTCTTC 1 cut(s) 100
BstBAI YACGTR 1 cut(s) 55
BstBI TTCGAA 1 cut(s) 1431
BstC8I GCNNGC 2 cut(s) 914, 1070
BstDEI CTNAG 5 cut(s) 77, 140, 598, 996, 1418
BstDSI CCRYGG 1 cut(s) 1156
BstF5I GGATG 4 cut(s) 1090, 1161, 1768, 1786
BstKTI GATC 7 cut(s) 73, 398, 510, 1018, 1485, 1564, 1830
BstMAI GTCTC 4 cut(s) 136, 677, 1290, 1586
BstMBI GATC 7 cut(s) 70, 395, 507, 1015, 1482, 1561, 1827
BstMWI GCNNNNNNNGC 1 cut(s) 1565
BstNI CCWGG 2 cut(s) 1518, 1602
BstNSI RCATGY 1 cut(s) 14
BstPAI GACNNNNGTC 1 cut(s) 947
BstSCI CCNGG 2 cut(s) 1516, 1600
BstSFI CTRYAG 1 cut(s) 1566
BstV1I GCAGC 3 cut(s) 836, 1232, 1763
BstV2I GAAGAC 1 cut(s) 1257
BstX2I RGATCY 4 cut(s) 395, 507, 1482, 1827
BstXI CCANNNNNNTGG 1 cut(s) 1781
BstYI RGATCY 4 cut(s) 395, 507, 1482, 1827
BsuI GTATCC 1 cut(s) 52
BsuRI GGCC 5 cut(s) 739, 816, 1438, 1654, 1674
BtgI CCRYGG 1 cut(s) 1156
BtsCI GGATG 4 cut(s) 1090, 1161, 1768, 1786
BtsI GCAGTG 1 cut(s) 1653
BtsIMutI CAGTG 6 cut(s) 653, 934, 984, 993, 1107, 1653
BveI ACCTGC 1 cut(s) 133
Cac8I GCNNGC 2 cut(s) 914, 1070
CciI TCATGA 1 cut(s) 223
Cfr13I GGNCC 4 cut(s) 161, 668, 1153, 1672
Csp6I GTAC 5 cut(s) 52, 734, 1235, 1618, 1710
CspCI CAANNNNNGTGG 3 cut(s) 1536, 1571, 1846
CviQI GTAC 5 cut(s) 52, 734, 1235, 1618, 1710
DdeI CTNAG 5 cut(s) 77, 140, 598, 996, 1418
DpnI GATC 7 cut(s) 72, 397, 509, 1017, 1484, 1563, 1829
DpnII GATC 7 cut(s) 70, 395, 507, 1015, 1482, 1561, 1827
DraI TTTAAA 1 cut(s) 546
DraIII CACNNNGTG 1 cut(s) 999
Eam1104I CTCTTC 1 cut(s) 100
EarI CTCTTC 1 cut(s) 100
Eco130I CCWWGG 2 cut(s) 740, 1156
Eco47I GGWCC 3 cut(s) 161, 668, 1153
Eco57I CTGAAG 3 cut(s) 81, 225, 1338
EcoO109I RGGNCCY 1 cut(s) 161
EcoRI GAATTC 1 cut(s) 1789
EcoRII CCWGG 2 cut(s) 1516, 1600
EcoT14I CCWWGG 2 cut(s) 740, 1156
EcoT22I ATGCAT 1 cut(s) 374
ErhI CCWWGG 2 cut(s) 740, 1156
Esp3I CGTCTC 1 cut(s) 1290
FalI AAGNNNNNCTT 2 cut(s) 552, 584
FaqI GGGAC 2 cut(s) 174, 1241
FauI CCCGC 1 cut(s) 1194
FauNDI CATATG 1 cut(s) 946
FblI GTMKAC 1 cut(s) 936
Fnu4HI GCNGC 3 cut(s) 850, 1221, 1752
FokI GGATG 4 cut(s) 1097, 1148, 1775, 1793
Fsp4HI GCNGC 3 cut(s) 850, 1221, 1752
FspBI CTAG 2 cut(s) 501, 810
GluI GCNGC 3 cut(s) 850, 1221, 1752
GsaI CCCAGC 1 cut(s) 1227
GsuI CTGGAG 1 cut(s) 1217
HaeIII GGCC 5 cut(s) 739, 816, 1438, 1654, 1674
HapII CCGG 2 cut(s) 1091, 1817
HincII GTYRAC 2 cut(s) 201, 726
HindII GTYRAC 2 cut(s) 201, 726
HindIII AAGCTT 1 cut(s) 910
HpaII CCGG 2 cut(s) 1091, 1817
HphI GGTGA 9 cut(s) 182, 410, 416, 1043, 1047, 1159, 1621, 1763, 1831
Hpy166II GTNNAC 4 cut(s) 201, 726, 734, 937
Hpy8I GTNNAC 4 cut(s) 201, 726, 734, 937
HpyAV CCTTC 7 cut(s) 265, 317, 827, 888, 1088, 1336, 1835
HpyCH4III ACNGT 5 cut(s) 30, 85, 648, 1102, 1301
HpyCH4IV ACGT 2 cut(s) 54, 933
HpyF10VI GCNNNNNNNGC 1 cut(s) 1565
HpyF3I CTNAG 5 cut(s) 77, 140, 598, 996, 1418
HpySE526I ACGT 2 cut(s) 54, 933
KflI GGGWCCC 1 cut(s) 161
Kpn2I TCCGGA 1 cut(s) 1090
Kzo9I GATC 7 cut(s) 70, 395, 507, 1015, 1482, 1561, 1827
LmnI GCTCC 1 cut(s) 1198
Lsp1109I GCAGC 3 cut(s) 836, 1232, 1763
LweI GCATC 3 cut(s) 44, 1170, 1707
MaeI CTAG 2 cut(s) 501, 810
MaeII ACGT 2 cut(s) 54, 933
MaeIII GTNAC 9 cut(s) 404, 929, 989, 1031, 1053, 1204, 1582, 1769, 1819
MalI GATC 7 cut(s) 72, 397, 509, 1017, 1484, 1563, 1829
MbiI CCGCTC 1 cut(s) 1201
MboI GATC 7 cut(s) 70, 395, 507, 1015, 1482, 1561, 1827
MfeI CAATTG 1 cut(s) 828
MflI RGATCY 4 cut(s) 395, 507, 1482, 1827
MluCI AATT 8 cut(s) 351, 383, 564, 828, 1391, 1656, 1716, 1789
MlyI GAGTC 5 cut(s) 601, 683, 880, 1429, 1777
MmeI TCCRAC 3 cut(s) 261, 1294, 1308
Mph1103I ATGCAT 1 cut(s) 374
MroI TCCGGA 1 cut(s) 1090
MroXI GAANNNNTTC 2 cut(s) 902, 1351
MseI TTAA 2 cut(s) 519, 545
MslI CAYNNNNRTG 4 cut(s) 377, 1103, 1137, 1779
MspA1I CMGCKG 1 cut(s) 1223
MspI CCGG 2 cut(s) 1091, 1817
MspR9I CCNGG 2 cut(s) 1518, 1602
MunI CAATTG 1 cut(s) 828
Mva1269I GAATGC 3 cut(s) 582, 904, 925
MvaI CCWGG 2 cut(s) 1518, 1602
MwoI GCNNNNNNNGC 1 cut(s) 1565
NcoI CCATGG 1 cut(s) 1156
NdeI CATATG 1 cut(s) 946
NdeII GATC 7 cut(s) 70, 395, 507, 1015, 1482, 1561, 1827
NlaIV GGNNCC 7 cut(s) 162, 163, 397, 639, 1154, 1484, 1499
NmuCI GTSAC 6 cut(s) 404, 929, 1031, 1053, 1769, 1819
NsiI ATGCAT 1 cut(s) 374
NspI RCATGY 1 cut(s) 14
NspV TTCGAA 1 cut(s) 1431
OliI CACNNNNGTG 1 cut(s) 1103
PagI TCATGA 1 cut(s) 223
PciI ACATGT 1 cut(s) 10
PctI GAATGC 3 cut(s) 582, 904, 925
PdmI GAANNNNTTC 2 cut(s) 902, 1351
PfeI GAWTC 5 cut(s) 465, 1373, 1428, 1577, 1813
PfoI TCCNGGA 1 cut(s) 1600
PkrI GCNGC 3 cut(s) 851, 1222, 1753
PleI GAGTC 5 cut(s) 601, 683, 879, 1428, 1776
PpsI GAGTC 5 cut(s) 601, 683, 879, 1428, 1776
Ppu21I YACGTR 1 cut(s) 55
PpuMI RGGWCCY 1 cut(s) 161
PscI ACATGT 1 cut(s) 10
PshAI GACNNNNGTC 1 cut(s) 947
PsiI TTATAA 1 cut(s) 306
Psp5II RGGWCCY 1 cut(s) 161
Psp6I CCWGG 2 cut(s) 1516, 1600
PspFI CCCAGC 1 cut(s) 1223
PspGI CCWGG 2 cut(s) 1516, 1600
PspN4I GGNNCC 7 cut(s) 162, 163, 397, 639, 1154, 1484, 1499
PspPI GGNCC 4 cut(s) 161, 668, 1153, 1672
PspPPI RGGWCCY 1 cut(s) 161
PstI CTGCAG 1 cut(s) 1570
PsuI RGATCY 4 cut(s) 395, 507, 1482, 1827
PvuII CAGCTG 1 cut(s) 1223
RsaI GTAC 5 cut(s) 53, 735, 1236, 1619, 1711
RsaNI GTAC 5 cut(s) 52, 734, 1235, 1618, 1710
RseI CAYNNNNRTG 4 cut(s) 377, 1103, 1137, 1779
SaqAI TTAA 2 cut(s) 519, 545
SatI GCNGC 3 cut(s) 850, 1221, 1752
Sau3AI GATC 7 cut(s) 70, 395, 507, 1015, 1482, 1561, 1827
Sau96I GGNCC 4 cut(s) 161, 668, 1153, 1672
SchI GAGTC 5 cut(s) 601, 683, 880, 1429, 1777
ScrFI CCNGG 2 cut(s) 1518, 1602
SfaNI GCATC 3 cut(s) 44, 1170, 1707
SfcI CTRYAG 1 cut(s) 1566
SfuI TTCGAA 1 cut(s) 1431
SinI GGWCC 3 cut(s) 161, 668, 1153
SmiMI CAYNNNNRTG 4 cut(s) 377, 1103, 1137, 1779
SmlI CTYRAG 1 cut(s) 1628
SmoI CTYRAG 1 cut(s) 1628
Sse9I AATT 8 cut(s) 351, 383, 564, 828, 1391, 1656, 1716, 1789
SsiI CCGC 1 cut(s) 1201
SspI AATATT 1 cut(s) 838
SspMI CTAG 2 cut(s) 501, 810
StyD4I CCNGG 2 cut(s) 1516, 1600
StyI CCWWGG 2 cut(s) 740, 1156
TaaI ACNGT 5 cut(s) 30, 85, 648, 1102, 1301
TaiI ACGT 2 cut(s) 57, 936
TaqI TCGA 5 cut(s) 977, 1294, 1426, 1431, 1575
TasI AATT 8 cut(s) 351, 383, 564, 828, 1391, 1656, 1716, 1789
TfiI GAWTC 5 cut(s) 465, 1373, 1428, 1577, 1813
Tru1I TTAA 2 cut(s) 519, 545
Tru9I TTAA 2 cut(s) 519, 545
TscAI CASTG 6 cut(s) 653, 934, 991, 1000, 1107, 1653
TseFI GTSAC 6 cut(s) 404, 929, 1031, 1053, 1769, 1819
TseI GCWGC 3 cut(s) 849, 1220, 1751
Tsp45I GTSAC 6 cut(s) 404, 929, 1031, 1053, 1769, 1819
TspDTI ATGAA 8 cut(s) 284, 395, 564, 777, 1172, 1554, 1628, 1703
TspGWI ACGGA 1 cut(s) 883
TspRI CASTG 6 cut(s) 653, 934, 991, 1000, 1107, 1653
VpaK11BI GGWCC 3 cut(s) 161, 668, 1153
XapI RAATTY 1 cut(s) 1789
XbaI TCTAGA 1 cut(s) 500
XceI RCATGY 1 cut(s) 14
XcmI CCANNNNNNNNNTGG 1 cut(s) 566
XmiI GTMKAC 1 cut(s) 936
XmnI GAANNNNTTC 2 cut(s) 902, 1351
XspI CTAG 2 cut(s) 501, 810
Zsp2I ATGCAT 1 cut(s) 374
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.