RLG00000019442

Protein kinase domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr4
OG0001247
Physical Location & Seq
Reverse (-)
52049308 .. 52053654
4347 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000019442

Sequence Viewer

Length: 1953 bp
ATGCCTGGAGGATTCAAGATTGTTTGTTTTTTGTATTCGAGTTTCGTTCCCGGACGTCACAGAGCTTCTGTTTCTCTCCGCAGCAAAATGGAGCAGCAAATTGCAAAAGAAAAGCCTGCAATTGCTTTCGAGTATGAGCTCTTTGAGGGAGACCCTGATCATCTAACAACTGTTGTAGCTACACTCACTCCAACTAGTCACTGGATCAATCCTGCCTCATTGAACTTTAAGTACCGAATTGGACGAGGCCCCTTTGGTGATGTATGGTTGGCAACTCATCATCAGTCAGCAGATGATTATGATGAGTATCATGAGGTAGCAGTTAAGATGTTGCATCCTTTGAAGGAGGAGGACAGAGAAAAGTTTCTGCTCAAGTTTGAAAAGTTATTTTTCAAGTTCCGCAGACTGTGCGGTGTTTGTTGGTTTCATGGTATCTCAATCATTGATGGAAGGATCTGCATCGCTATGAAATTTTATGAGGGGTCAGTTGGTGACCGAGTTGCCAGGTTGAAGGGTGGAAAACTTCAACTTTTTGATGTTTTAAGGTATGGGATTGAGTTGGCAAAAGGAATTTCAGAATTGCATTTGCTAGGGCTTCTGGTGCTAAACTTGAAGCCGTCCAACATCCTTCTAGATGAACACGGCCAGGTGGTCCTTGGAGATTTTGGAATCCCATTTCTACTTCTTGGGGCTTCATTGTCTAATCCTAATATGGCTTTTAGACTTGGCACTCCGAACTACATGGCTCCAGAACAGTGGGAACCAGAAGTGAGGGGTCCTATAGCTTTAGAAACAGATTCGTGGGGCTTTGGATGTTGCTTTGTAGAGATGTTGACTGGTAGTCAACCCTGGTTTGGGAGTTCAATTAAAGAAATATATCATTCAGTCGTGATCAAGCAAGAAAAGCCACCTGTTCCAAGTGGTTTGCCTCCTGCAGTGGAGAATGTTATCAATGGTTGCTTTGAGTATGATCTCCGTAATAGGCCTTCAATGGAAGATATCATACGTGCATTGGAAAGCTCACAAAAAGATGTTCAAAGCGATGGAGAATGGCTTGGTTTAGGGAGCAGCACACCTGCTGGAAAACTTAGTAGCGGCAGTTATAGTGCGTGGCATCTCTTAAAAGATGATCTCCAGGTTGGAGACATAGTTCGCTCCAGAAAGCCAGTAAATGCACGCAAGCGTCAACCTCTTGATGTCCCTGAAGGAATTGTAACTGGCCTGGAAAGTGATTCTGGTAGTGCCCTGGTGAAGATCCCTCGAGCGCGCAAGCCTGTCAGAGTATCAGTGTCAACACTTGAGAGAGTCACATCTGGCTTGACAGCAGGTGATTGGGTGCGGTTGAAGGGAGAACTGCACAAGCACTCTCCTGTTGGAATTCTTCATTCTATACAACGTGATGGAAGTGTTGCTGTTGGGTTTATTGGGCTAGAGACTCTATGGAGAGGGAAATCATCTGACATTGAAATGGCTGATGCATATTATGTAGGAGAGTTTGTGAGGCTGAAGGTGAATGTGGTTTCTTCCAGATTTGAGTGGCCTCGTAAGGGTGGAGGTGGGGCATGGGCTACTGGAAGGATCTCACAAGTCCTTCCGAATGGTTGTCTGGTTGTGAGGTTCCCTGGAAGATTGGAATTTGGAGATGAAGCTCGTAGCTTCTTGGCAGATCCATATGAAGTAGAACTAGTGTCCTTTGATACTTGTCCTGGTCTGGTCGAAAAATATCAACATGTTGAGGATTTTCACTGGGCAGTCAGGCCACTTACAATTGCATTTGGTCTCTTTACAGCCATGAAGTTCAGCTTGTTTGTTGGACGAAATGTAAGCGCAAGGGTGAAAGGCCGAAGAAACTCACTACAGGGCCAGAGCGGTGGAACTTCAGCTTGGCTTCCTCCGCCAGTTGCAAATCTTTTCAAAGAAGGTTCTTCTACTGCTACTGCTACTGCTAGGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0001101 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004842 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005769 GO:0005794 GO:0005802 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006810 GO:0006950 GO:0006952 GO:0007034 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0009719 GO:0009725 GO:0009737 GO:0009738 GO:0009755 GO:0009787 GO:0009788 GO:0009966 GO:0009968 GO:0009987 GO:0010033 GO:0010646 GO:0010648 GO:0012505 GO:0016192 GO:0016197 GO:0016301 GO:0016310 GO:0016567 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0019787 GO:0023051 GO:0023052 GO:0023057 GO:0031410 GO:0031982 GO:0031984 GO:0032446 GO:0032502 GO:0032870 GO:0032940 GO:0033993 GO:0036211 GO:0040007 GO:0042221 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043621 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044431 GO:0044444 GO:0044446 GO:0044464 GO:0045324 GO:0046903 GO:0046907 GO:0048519 GO:0048523 GO:0048583 GO:0048585 GO:0048589 GO:0050789 GO:0050794 GO:0050896 GO:0051179 GO:0051234 GO:0051641 GO:0051649 GO:0051716 GO:0065007 GO:0070647 GO:0070887 GO:0071215 GO:0071229 GO:0071310 GO:0071396 GO:0071495 GO:0071704 GO:0097305 GO:0097306 GO:0097708 GO:0098791 GO:0140096 GO:1901419 GO:1901420 GO:1901564 GO:1901700 GO:1901701 GO:1905957 GO:1905958
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DOG1 Pkinase Pkinase_Tyr

Protein Analysis

651

Amino Acids

72.05

Weight (kDa)

8.41

Isoelectric Point (pI)

36.72

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PK_Tyr_Ser-Thr PF07714 75 - 338 1.3e-29 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 77 - 335 2.7e-27 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 1084, 1316
AatII GACGTC 1 cut(s) 58
Acc36I ACCTGC 2 cut(s) 1084, 1316
AccBSI CCGCTC 1 cut(s) 1869
AccII CGCG 1 cut(s) 1267
AciI CCGC 7 cut(s) 79, 400, 411, 1095, 1339, 1869, 1895
AclWI GGATC 5 cut(s) 212, 461, 1249, 1586, 1661
AcoI YGGCCR 1 cut(s) 643
AcsI RAATTY 4 cut(s) 470, 570, 1377, 1634
AcuI CTGAAG 3 cut(s) 1224, 1526, 1863
AcyI GRCGYC 1 cut(s) 55
AfaI GTAC 1 cut(s) 233
AfiI CCNNNNNNNGG 3 cut(s) 854, 855, 1547
AflIII ACRYGT 1 cut(s) 1729
AhdI GACNNNNNGTC 1 cut(s) 840
AhlI ACTAGT 2 cut(s) 194, 1684
AjnI CCWGG 9 cut(s) 4, 503, 645, 848, 1134, 1221, 1245, 1621, 1705
AjuI GAANNNNNNNTTGG 2 cut(s) 1867, 1899
AloI GAACNNNNNNTCC 2 cut(s) 1134, 1166
AluBI AGCT 9 cut(s) 65, 139, 179, 785, 1020, 1649, 1656, 1803, 1883
AluI AGCT 9 cut(s) 65, 139, 179, 785, 1020, 1649, 1656, 1803, 1883
Alw21I GWGCWC 1 cut(s) 141
Alw26I GTCTC 4 cut(s) 144, 1137, 1427, 1784
AlwI GGATC 5 cut(s) 212, 461, 1249, 1586, 1661
Ama87I CYCGRG 1 cut(s) 1260
AoxI GGCC 8 cut(s) 247, 643, 983, 1219, 1538, 1757, 1840, 1861
ApeKI GCWGC 3 cut(s) 81, 94, 1068
ApoI RAATTY 4 cut(s) 470, 570, 1377, 1634
Asp700I GAANNNNTTC 1 cut(s) 363
AspLEI GCGC 3 cut(s) 1267, 1269, 1829
AspS9I GGNCC 4 cut(s) 248, 652, 776, 1861
AsuC2I CCSGG 1 cut(s) 51
AsuHPI GGTGA 6 cut(s) 269, 503, 1261, 1340, 1522, 1846
AvaI CYCGRG 1 cut(s) 1260
AvaII GGWCC 2 cut(s) 652, 776
BaeGI GKGCMC 1 cut(s) 1246
BanII GRGCYC 1 cut(s) 141
BarI GAAGNNNNNNTAC 4 cut(s) 970, 987, 1002, 1019
Bbv12I GWGCWC 1 cut(s) 141
BbvI GCAGC 3 cut(s) 93, 106, 1080
BccI CCATC 3 cut(s) 440, 1037, 1394
BceAI ACGGC 2 cut(s) 601, 658
BciT130I CCWGG 9 cut(s) 6, 505, 647, 850, 1136, 1223, 1247, 1623, 1707
BclI TGATCA 2 cut(s) 157, 891
BcnI CCSGG 1 cut(s) 51
BcoDI GTCTC 4 cut(s) 144, 1137, 1427, 1784
BcuI ACTAGT 2 cut(s) 194, 1684
BfaI CTAG 6 cut(s) 195, 590, 632, 1430, 1685, 1947
BfmI CTRYAG 3 cut(s) 780, 933, 1856
BfuAI ACCTGC 2 cut(s) 1084, 1316
BisI GCNGC 4 cut(s) 82, 95, 1069, 1096
BlsI GCNGC 4 cut(s) 83, 96, 1070, 1097
Bme18I GGWCC 2 cut(s) 652, 776
BmeRI GACNNNNNGTC 1 cut(s) 840
BmeT110I CYCGRG 1 cut(s) 1260
BmgT120I GGNCC 4 cut(s) 248, 652, 776, 1861
BmiI GGNNCC 5 cut(s) 250, 747, 762, 777, 1619
BmrI ACTGGG 1 cut(s) 1756
BmsI GCATC 4 cut(s) 343, 468, 1123, 1465
BmuI ACTGGG 1 cut(s) 1756
BpmI CTGGAG 4 cut(s) 27, 732, 1118, 1141
BpuEI CTTGAG 2 cut(s) 356, 1319
BpuMI CCSGG 1 cut(s) 51
BsaAI YACGTR 1 cut(s) 1007
BsaBI GATNNNNATC 2 cut(s) 306, 458
BsaHI GRCGYC 1 cut(s) 55
BsaI GGTCTC 2 cut(s) 144, 1784
BsaJI CCNNGG 4 cut(s) 655, 848, 1245, 1621
BsaXI ACNNNNNCTCC 6 cut(s) 172, 202, 1134, 1164, 1482, 1512
Bsc4I CCNNNNNNNGG 3 cut(s) 854, 855, 1547
Bse1I ACTGG 7 cut(s) 206, 841, 1166, 1222, 1576, 1751, 1898
Bse8I GATNNNNATC 2 cut(s) 306, 458
BseBI CCWGG 9 cut(s) 6, 505, 647, 850, 1136, 1223, 1247, 1623, 1707
BseDI CCNNGG 4 cut(s) 655, 848, 1245, 1621
BseGI GGATG 3 cut(s) 334, 624, 818
BseJI GATNNNNATC 2 cut(s) 306, 458
BseLI CCNNNNNNNGG 3 cut(s) 854, 855, 1547
BseNI ACTGG 7 cut(s) 206, 841, 1166, 1222, 1576, 1751, 1898
BsePI GCGCGC 1 cut(s) 1265
BseRI GAGGAG 1 cut(s) 362
BseSI GKGCMC 1 cut(s) 1246
BseXI GCAGC 3 cut(s) 93, 106, 1080
BsgI GTGCAG 1 cut(s) 1340
Bsh1236I CGCG 1 cut(s) 1267
BshFI GGCC 8 cut(s) 249, 645, 985, 1221, 1540, 1759, 1842, 1863
BsiHKAI GWGCWC 1 cut(s) 141
BsiHKCI CYCGRG 1 cut(s) 1260
BsiSI CCGG 1 cut(s) 51
BslFI GGGAC 1 cut(s) 1184
BslI CCNNNNNNNGG 3 cut(s) 854, 855, 1547
BsmAI GTCTC 4 cut(s) 144, 1137, 1427, 1784
BsmFI GGGAC 1 cut(s) 1184
BsnI GGCC 8 cut(s) 249, 645, 985, 1221, 1540, 1759, 1842, 1863
Bso31I GGTCTC 2 cut(s) 144, 1784
BsoBI CYCGRG 1 cut(s) 1260
Bsp1286I GDGCHC 2 cut(s) 141, 1246
Bsp143I GATC 9 cut(s) 157, 204, 453, 891, 970, 1129, 1254, 1578, 1666
BspACI CCGC 7 cut(s) 79, 400, 411, 1095, 1339, 1869, 1895
BspANI GGCC 8 cut(s) 249, 645, 985, 1221, 1540, 1759, 1842, 1863
BspFNI CGCG 1 cut(s) 1267
BspHI TCATGA 1 cut(s) 310
BspLI GGNNCC 5 cut(s) 250, 747, 762, 777, 1619
BspMAI CTGCAG 1 cut(s) 937
BspMI ACCTGC 2 cut(s) 1084, 1316
BspPI GGATC 5 cut(s) 212, 461, 1249, 1586, 1661
BspTNI GGTCTC 2 cut(s) 144, 1784
BsrBI CCGCTC 1 cut(s) 1869
BsrI ACTGG 7 cut(s) 206, 841, 1166, 1222, 1576, 1751, 1898
BssECI CCNNGG 4 cut(s) 655, 848, 1245, 1621
BssHII GCGCGC 1 cut(s) 1265
BssMI GATC 9 cut(s) 157, 204, 453, 891, 970, 1129, 1254, 1578, 1666
BssNI GRCGYC 1 cut(s) 55
BssT1I CCWWGG 1 cut(s) 655
Bst2UI CCWGG 9 cut(s) 6, 505, 647, 850, 1136, 1223, 1247, 1623, 1707
Bst4CI ACNGT 3 cut(s) 172, 408, 756
BstACI GRCGYC 1 cut(s) 55
BstAPI GCANNNNNTGC 1 cut(s) 408
BstBAI YACGTR 1 cut(s) 1007
BstC8I GCNNGC 5 cut(s) 117, 1177, 1181, 1267, 1271
BstDEI CTNAG 1 cut(s) 1088
BstEII GGTNACC 1 cut(s) 491
BstF5I GGATG 3 cut(s) 334, 624, 818
BstFNI CGCG 1 cut(s) 1267
BstHHI GCGC 3 cut(s) 1267, 1269, 1829
BstKTI GATC 9 cut(s) 160, 207, 456, 894, 973, 1132, 1257, 1581, 1669
BstMAI GTCTC 4 cut(s) 144, 1137, 1427, 1784
BstMBI GATC 9 cut(s) 157, 204, 453, 891, 970, 1129, 1254, 1578, 1666
BstMWI GCNNNNNNNGC 4 cut(s) 408, 601, 904, 1894
BstNI CCWGG 9 cut(s) 6, 505, 647, 850, 1136, 1223, 1247, 1623, 1707
BstNSI RCATGY 1 cut(s) 1733
BstPI GGTNACC 1 cut(s) 491
BstSFI CTRYAG 3 cut(s) 780, 933, 1856
BstSLI GKGCMC 1 cut(s) 1246
BstUI CGCG 1 cut(s) 1267
BstV1I GCAGC 3 cut(s) 93, 106, 1080
BstX2I RGATCY 4 cut(s) 453, 1254, 1578, 1666
BstXI CCANNNNNNTGG 2 cut(s) 756, 1871
BstYI RGATCY 4 cut(s) 453, 1254, 1578, 1666
BsuRI GGCC 8 cut(s) 249, 645, 985, 1221, 1540, 1759, 1842, 1863
BtgZI GCGATG 2 cut(s) 445, 1056
BtsCI GGATG 3 cut(s) 334, 624, 818
BtsI GCAGTG 1 cut(s) 942
BtsIMutI CAGTG 5 cut(s) 199, 761, 942, 1293, 1744
BveI ACCTGC 2 cut(s) 1084, 1316
Cac8I GCNNGC 5 cut(s) 117, 1177, 1181, 1267, 1271
CciI TCATGA 1 cut(s) 310
CfoI GCGC 3 cut(s) 1267, 1269, 1829
Cfr13I GGNCC 4 cut(s) 248, 652, 776, 1861
CseI GACGC 1 cut(s) 1172
Csp6I GTAC 1 cut(s) 232
CviAII CATG 6 cut(s) 311, 428, 742, 1563, 1730, 1792
CviQI GTAC 1 cut(s) 232
DdeI CTNAG 1 cut(s) 1088
DpnI GATC 9 cut(s) 159, 206, 455, 893, 972, 1131, 1256, 1580, 1668
DpnII GATC 9 cut(s) 157, 204, 453, 891, 970, 1129, 1254, 1578, 1666
DriI GACNNNNNGTC 1 cut(s) 840
EaeI YGGCCR 1 cut(s) 643
Eam1105I GACNNNNNGTC 1 cut(s) 840
EciI GGCGGA 1 cut(s) 1884
Ecl136II GAGCTC 1 cut(s) 139
Eco130I CCWWGG 1 cut(s) 655
Eco147I AGGCCT 1 cut(s) 985
Eco24I GRGCYC 1 cut(s) 141
Eco31I GGTCTC 2 cut(s) 144, 1784
Eco32I GATATC 1 cut(s) 1000
Eco47I GGWCC 2 cut(s) 652, 776
Eco53kI GAGCTC 1 cut(s) 139
Eco57I CTGAAG 3 cut(s) 1224, 1526, 1863
Eco88I CYCGRG 1 cut(s) 1260
Eco91I GGTNACC 1 cut(s) 491
EcoICRI GAGCTC 1 cut(s) 139
EcoO109I RGGNCCY 2 cut(s) 248, 776
EcoO65I GGTNACC 1 cut(s) 491
EcoRI GAATTC 1 cut(s) 1377
EcoRII CCWGG 9 cut(s) 4, 503, 645, 848, 1134, 1221, 1245, 1621, 1705
EcoRV GATATC 1 cut(s) 1000
EcoT14I CCWWGG 1 cut(s) 655
EcoT22I ATGCAT 1 cut(s) 1480
EcoT38I GRGCYC 1 cut(s) 141
ErhI CCWWGG 1 cut(s) 655
FaeI CATG 6 cut(s) 314, 431, 745, 1566, 1733, 1795
FalI AAGNNNNNCTT 2 cut(s) 1787, 1819
FaqI GGGAC 1 cut(s) 1184
FatI CATG 6 cut(s) 310, 427, 741, 1562, 1729, 1791
FauNDI CATATG 1 cut(s) 1672
FbaI TGATCA 2 cut(s) 157, 891
Fnu4HI GCNGC 4 cut(s) 82, 95, 1069, 1096
FokI GGATG 3 cut(s) 321, 611, 825
FriOI GRGCYC 1 cut(s) 141
Fsp4HI GCNGC 4 cut(s) 82, 95, 1069, 1096
FspBI CTAG 6 cut(s) 195, 590, 632, 1430, 1685, 1947
GlaI GCGC 3 cut(s) 1266, 1268, 1828
GluI GCNGC 4 cut(s) 82, 95, 1069, 1096
GsuI CTGGAG 4 cut(s) 27, 732, 1118, 1141
HaeIII GGCC 8 cut(s) 249, 645, 985, 1221, 1540, 1759, 1842, 1863
HapII CCGG 1 cut(s) 51
HgaI GACGC 1 cut(s) 1172
HhaI GCGC 3 cut(s) 1267, 1269, 1829
Hin1I GRCGYC 1 cut(s) 55
Hin1II CATG 6 cut(s) 314, 431, 745, 1566, 1733, 1795
Hin6I GCGC 3 cut(s) 1265, 1267, 1827
HinP1I GCGC 3 cut(s) 1265, 1267, 1827
HincII GTYRAC 4 cut(s) 834, 845, 1187, 1293
HindII GTYRAC 4 cut(s) 834, 845, 1187, 1293
HinfI GANTC 6 cut(s) 12, 669, 797, 1232, 1305, 1435
HpaII CCGG 1 cut(s) 51
HphI GGTGA 6 cut(s) 269, 503, 1261, 1340, 1522, 1846
Hpy166II GTNNAC 4 cut(s) 834, 845, 1187, 1293
Hpy188I TCNGA 5 cut(s) 577, 735, 1280, 1459, 1596
Hpy188III TCNNGA 8 cut(s) 16, 311, 632, 749, 889, 1158, 1193, 1527
Hpy8I GTNNAC 4 cut(s) 834, 845, 1187, 1293
HpyCH4III ACNGT 3 cut(s) 172, 408, 756
HpyCH4IV ACGT 3 cut(s) 55, 1006, 1396
HpyF10VI GCNNNNNNNGC 4 cut(s) 408, 601, 904, 1894
HpyF3I CTNAG 1 cut(s) 1088
HpySE526I ACGT 3 cut(s) 55, 1006, 1396
Hsp92I GRCGYC 1 cut(s) 55
Hsp92II CATG 6 cut(s) 314, 431, 745, 1566, 1733, 1795
HspAI GCGC 3 cut(s) 1265, 1267, 1827
Ksp22I TGATCA 2 cut(s) 157, 891
Kzo9I GATC 9 cut(s) 157, 204, 453, 891, 970, 1129, 1254, 1578, 1666
LmnI GCTCC 4 cut(s) 91, 751, 1065, 1160
Lsp1109I GCAGC 3 cut(s) 93, 106, 1080
LweI GCATC 4 cut(s) 343, 468, 1123, 1465
MaeI CTAG 6 cut(s) 195, 590, 632, 1430, 1685, 1947
MaeII ACGT 3 cut(s) 55, 1006, 1396
MaeIII GTNAC 5 cut(s) 56, 197, 491, 1213, 1306
MalI GATC 9 cut(s) 159, 206, 455, 893, 972, 1131, 1256, 1580, 1668
MbiI CCGCTC 1 cut(s) 1869
MboI GATC 9 cut(s) 157, 204, 453, 891, 970, 1129, 1254, 1578, 1666
MboII GAAGA 7 cut(s) 1007, 1264, 1373, 1515, 1638, 1857, 1917
MfeI CAATTG 2 cut(s) 120, 1767
MflI RGATCY 4 cut(s) 453, 1254, 1578, 1666
MhlI GDGCHC 2 cut(s) 141, 1246
MlyI GAGTC 2 cut(s) 1314, 1429
MmeI TCCRAC 5 cut(s) 215, 645, 1120, 1354, 1792
Mph1103I ATGCAT 1 cut(s) 1480
MroXI GAANNNNTTC 1 cut(s) 363
MseI TTAA 5 cut(s) 228, 324, 542, 867, 1121
MslI CAYNNNNRTG 2 cut(s) 464, 1466
MspI CCGG 1 cut(s) 51
MunI CAATTG 2 cut(s) 120, 1767
MvaI CCWGG 9 cut(s) 6, 505, 647, 850, 1136, 1223, 1247, 1623, 1707
MvnI CGCG 1 cut(s) 1267
MwoI GCNNNNNNNGC 4 cut(s) 408, 601, 904, 1894
NciI CCSGG 1 cut(s) 51
NdeI CATATG 1 cut(s) 1672
NdeII GATC 9 cut(s) 157, 204, 453, 891, 970, 1129, 1254, 1578, 1666
NlaIII CATG 6 cut(s) 314, 431, 745, 1566, 1733, 1795
NlaIV GGNNCC 5 cut(s) 250, 747, 762, 777, 1619
NmuCI GTSAC 4 cut(s) 56, 197, 491, 1306
NsiI ATGCAT 1 cut(s) 1480
NspI RCATGY 1 cut(s) 1733
PaeR7I CTCGAG 1 cut(s) 1260
PagI TCATGA 1 cut(s) 310
PaqCI CACCTGC 2 cut(s) 1084, 1316
PauI GCGCGC 1 cut(s) 1265
PceI AGGCCT 1 cut(s) 985
PciI ACATGT 1 cut(s) 1729
PdmI GAANNNNTTC 1 cut(s) 363
PfeI GAWTC 4 cut(s) 12, 669, 797, 1232
PfoI TCCNGGA 1 cut(s) 49
PkrI GCNGC 4 cut(s) 83, 96, 1070, 1097
PleI GAGTC 2 cut(s) 1313, 1429
PpsI GAGTC 2 cut(s) 1313, 1429
Ppu21I YACGTR 1 cut(s) 1007
PpuMI RGGWCCY 1 cut(s) 776
PscI ACATGT 1 cut(s) 1729
Psp124BI GAGCTC 1 cut(s) 141
Psp5II RGGWCCY 1 cut(s) 776
Psp6I CCWGG 9 cut(s) 4, 503, 645, 848, 1134, 1221, 1245, 1621, 1705
PspEI GGTNACC 1 cut(s) 491
PspGI CCWGG 9 cut(s) 4, 503, 645, 848, 1134, 1221, 1245, 1621, 1705
PspN4I GGNNCC 5 cut(s) 250, 747, 762, 777, 1619
PspPI GGNCC 4 cut(s) 248, 652, 776, 1861
PspPPI RGGWCCY 1 cut(s) 776
PspXI VCTCGAGB 1 cut(s) 1260
PsrI GAACNNNNNNTAC 2 cut(s) 215, 247
PstI CTGCAG 1 cut(s) 937
PsuI RGATCY 4 cut(s) 453, 1254, 1578, 1666
PteI GCGCGC 1 cut(s) 1265
RsaI GTAC 1 cut(s) 233
RsaNI GTAC 1 cut(s) 232
RseI CAYNNNNRTG 2 cut(s) 464, 1466
SacI GAGCTC 1 cut(s) 141
SaqAI TTAA 5 cut(s) 228, 324, 542, 867, 1121
SatI GCNGC 4 cut(s) 82, 95, 1069, 1096
Sau3AI GATC 9 cut(s) 157, 204, 453, 891, 970, 1129, 1254, 1578, 1666
Sau96I GGNCC 4 cut(s) 248, 652, 776, 1861
SchI GAGTC 2 cut(s) 1314, 1429
SduI GDGCHC 2 cut(s) 141, 1246
SfaNI GCATC 4 cut(s) 343, 468, 1123, 1465
SfcI CTRYAG 3 cut(s) 780, 933, 1856
Sfr274I CTCGAG 1 cut(s) 1260
SinI GGWCC 2 cut(s) 652, 776
SlaI CTCGAG 1 cut(s) 1260
SmiMI CAYNNNNRTG 2 cut(s) 464, 1466
SmlI CTYRAG 3 cut(s) 371, 1260, 1298
SmoI CTYRAG 3 cut(s) 371, 1260, 1298
SpeI ACTAGT 2 cut(s) 194, 1684
SseBI AGGCCT 1 cut(s) 985
SsiI CCGC 7 cut(s) 79, 400, 411, 1095, 1339, 1869, 1895
SspMI CTAG 6 cut(s) 195, 590, 632, 1430, 1685, 1947
SstI GAGCTC 1 cut(s) 141
StuI AGGCCT 1 cut(s) 985
StyI CCWWGG 1 cut(s) 655
TaaI ACNGT 3 cut(s) 172, 408, 756
TaiI ACGT 3 cut(s) 58, 1009, 1399
TaqI TCGA 4 cut(s) 38, 129, 1261, 1716
TaqII GACCGA 1 cut(s) 510
TauI GCSGC 1 cut(s) 1098
TfiI GAWTC 4 cut(s) 12, 669, 797, 1232
Tru1I TTAA 5 cut(s) 228, 324, 542, 867, 1121
Tru9I TTAA 5 cut(s) 228, 324, 542, 867, 1121
TscAI CASTG 5 cut(s) 206, 761, 942, 1293, 1751
TseFI GTSAC 4 cut(s) 56, 197, 491, 1306
TseI GCWGC 3 cut(s) 81, 94, 1068
Tsp45I GTSAC 4 cut(s) 56, 197, 491, 1306
TspDTI ATGAA 8 cut(s) 416, 482, 651, 684, 1373, 1659, 1689, 1808
TspGWI ACGGA 1 cut(s) 965
TspRI CASTG 5 cut(s) 206, 761, 942, 1293, 1751
VpaK11BI GGWCC 2 cut(s) 652, 776
XapI RAATTY 4 cut(s) 470, 570, 1377, 1634
XbaI TCTAGA 1 cut(s) 631
XceI RCATGY 1 cut(s) 1733
XcmI CCANNNNNNNNNTGG 2 cut(s) 198, 653
XhoI CTCGAG 1 cut(s) 1260
XmnI GAANNNNTTC 1 cut(s) 363
XspI CTAG 6 cut(s) 195, 590, 632, 1430, 1685, 1947
ZraI GACGTC 1 cut(s) 56
Zsp2I ATGCAT 1 cut(s) 1480
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.