Rh6DG386800

E3 ubiquitin-protein ligase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6D
OG0001247
Physical Location & Seq
Reverse (-)
57988484 .. 57992683
4200 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6DG386800.1

Sequence Viewer

Length: 2016 bp
ATGAATCAGAAAAAAGAAGAAGAAAGAGCTCCGAAATCAGAGGGGCCCAGGCCCAAGTTTCACGGTACCCTTTTTCAGCTCAAGTCTGAATCGTCTCTCTGTTCTTTGTTTCAATCAAAGATGGATAAACATGTTGTTCCTGCTCAACCGTTAGCATCATTTGAGTATGAGTACGTGGATACTAATCCTGATCGTCTAAGAACTGTTGTAGCCTCTTCAGACCAGAAAAGTGCATGGATTGAACCTGCAAGGTTGAAACTGAGACACAGGATTGGGAGGGGACCCTTTGGTGATGTCTGGTTAGCAACCCATCATCAGTCAACTGAAGATTATGATGAGTATCATGAGGTGGCTGTCAAGATGTTTCAACCAATCAAAGAGGACAACATGAAGGCTGTGTTGGATAAACTTGAAGATGTTTTTTATAAGTGTCAAGGGGTAGAAGGTCTGTGTCGGCTACATGGAACTTCAATTATCAATGGAAAGATATGCATTGTAATGAAATTATACGAGGGATCCGTTGGTGACAAAATGGCTCACCTCAAAGGAGGGAAGCTCTCACTTCTTGATGTTTTGAGGTATGGAATCACATTGGCTATGGGGATTTCCGAACTGCACTCTAGAGAGATCTTGGTTCTTAATCTCAAACCTTGTAATGTTCTTTTAAATGAAAATGACCAAGCAATTCTTGGAGATTTTGGTATTCCTTATCTATTGCTTGGCATTCCATTGGTAAGCTCAGACATGACTCGGAGGATTGGAACTCCAAACTACATGGCACCTGAACAATGGCAACCAGAAGTAAGAGGTCCAATATCCTTTGAGACTGACTCATGGGGTTTTGGGTGCGTCATTGTAGAAATGTTGACTGGTGTGCGGCCTTGGTGTGGAAAATCTGTTGATGAAATACATTTTTCAGTTGTCAGAAAGCAAGAAAAACCAGACATACCTAGTGGCCTTCCTCCTGCAATTGAGAATATTCTTCTTGGCTGCTTTGAGTATGACTTACGGAGTCGTCCTTCAATAATGGACATATTGACTGCTTTCAAAAGCTTGCAGAATGCAGTCAGTGACGTAGACTGGACATATGTCGGGAATAGAGCAATCACAGAGAAATCGAGTAGCACTGGTTACACTGAGTGGTTTCTTTCAAAGGATCATCTGCTGGTGGGTGACATAGTTCGTTCCAGAAAGTCACCAAACTCCTGCAAGCCTGAAAACATGGATGTTCCGGAAGGCACAGTGGTGGGTATAGAACATGATACGGAGCAACATGGGTTTGTCTTGGTGAGGGTCCATGGCATCCATGACCCATTGAGGGTTCATGCTTCAACTCTGGAGCGGGTTACTTTTGGCTTGGCAGCTGGTGACTGGGTACGCTTGAAGAAGGAAGACAAGAAACACTCGCCAGTAGGTATTCTCCATTCCATCAATCGAGACGGTAGTGTAGCTGTTGGATTTATAGGGTTGGAAACTCTTTGGAAGGGAACTTCTTCAGAGTTTCAGATGGCAGAATCTTATTGTGTGGGTCAATTTGTTAGGCTGAAAGCCAATGTTCTGAGTCCTCGATTCGAATGGCCTCGTAAGACGGGAGGGAAATGGGCTACTGGTAAGATATGGTGGATCCTACCAAATGGGTGCCTTGTTGTGAAGTTCCCAGGAATACTGACTTTGGGGCATGAAAACTCAACATTTGTGGCTGATCCTGCAGAAGTCGAATCAGTTACATTTGAGACTTGTCCAGGAATGGTGAAGAAGTACCAACATCTTGAGGATTTTCATTGGGCAGTGAGGCCAATTCTGATTGCATTGGGCCTATTTACAGCCATGAAGACGGGCATCTGTATTGGTACAAAAATTGGGAAGTGTAAAGCGAAGAAACGATGGAGTGCAGCTATACAGGATGAGAGTCACCATTTGGATGGTCAGAATTCAGGAAATCCAGCTTGGAAGAATCCGGTGACAAAGATCCTTTTCAGAGAAGGTGGCAGTTCTGCCACAGGTCTTGCTCGGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0001101 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004842 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005769 GO:0005794 GO:0005802 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006810 GO:0006950 GO:0006952 GO:0007034 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0009719 GO:0009725 GO:0009737 GO:0009738 GO:0009755 GO:0009787 GO:0009788 GO:0009966 GO:0009968 GO:0009987 GO:0010033 GO:0010646 GO:0010648 GO:0012505 GO:0016192 GO:0016197 GO:0016301 GO:0016310 GO:0016567 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0019787 GO:0023051 GO:0023052 GO:0023057 GO:0031410 GO:0031982 GO:0031984 GO:0032446 GO:0032502 GO:0032870 GO:0032940 GO:0033993 GO:0036211 GO:0040007 GO:0042221 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043621 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044431 GO:0044444 GO:0044446 GO:0044464 GO:0045324 GO:0046903 GO:0046907 GO:0048519 GO:0048523 GO:0048583 GO:0048585 GO:0048589 GO:0050789 GO:0050794 GO:0050896 GO:0051179 GO:0051234 GO:0051641 GO:0051649 GO:0051716 GO:0065007 GO:0070647 GO:0070887 GO:0071215 GO:0071229 GO:0071310 GO:0071396 GO:0071495 GO:0071704 GO:0097305 GO:0097306 GO:0097708 GO:0098791 GO:0140096 GO:1901419 GO:1901420 GO:1901564 GO:1901700 GO:1901701 GO:1905957 GO:1905958
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Pkinase_Tyr

Protein Analysis

671

Amino Acids

74.96

Weight (kDa)

7.87

Isoelectric Point (pI)

34.94

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PK_Tyr_Ser-Thr PF07714 85 - 347 1.5e-30 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 88 - 346 1.8e-27 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 426
Acc36I ACCTGC 1 cut(s) 253
Acc65I GGTACC 1 cut(s) 65
AccB1I GGYRCC 3 cut(s) 65, 778, 1638
AccBSI CCGCTC 1 cut(s) 1342
AccI GTMKAC 1 cut(s) 1077
AccIII TCCGGA 1 cut(s) 1231
AciI CCGC 2 cut(s) 877, 1342
AclWI GGATC 7 cut(s) 510, 523, 1164, 1618, 1631, 1697, 1963
AcsI RAATTY 1 cut(s) 1930
AcuI CTGAAG 3 cut(s) 201, 345, 1479
AdeI CACNNNGTG 1 cut(s) 1140
AfaI GTAC 5 cut(s) 67, 173, 1377, 1760, 1852
AfiI CCNNNNNNNGG 2 cut(s) 887, 1318
AflIII ACRYGT 1 cut(s) 130
AjnI CCWGG 3 cut(s) 47, 1657, 1741
AjuI GAANNNNNNNTTGG 4 cut(s) 383, 415, 1930, 1962
AleI CACNNNNGTG 1 cut(s) 1244
AluBI AGCT 9 cut(s) 29, 79, 556, 738, 1053, 1364, 1451, 1895, 1946
AluI AGCT 9 cut(s) 29, 79, 556, 738, 1053, 1364, 1451, 1895, 1946
Alw21I GWGCWC 1 cut(s) 31
Alw26I GTCTC 5 cut(s) 99, 256, 818, 1431, 1727
AlwI GGATC 7 cut(s) 510, 523, 1164, 1618, 1631, 1697, 1963
Aor13HI TCCGGA 1 cut(s) 1231
AoxI GGCC 7 cut(s) 44, 50, 878, 955, 1577, 1793, 1813
ApaI GGGCCC 1 cut(s) 48
ApeKI GCWGC 3 cut(s) 990, 1361, 1892
ApoI RAATTY 1 cut(s) 1930
Asp700I GAANNNNTTC 1 cut(s) 1492
Asp718I GGTACC 1 cut(s) 65
AspS9I GGNCC 7 cut(s) 44, 45, 51, 281, 809, 1294, 1813
AsuII TTCGAA 1 cut(s) 1572
AvaII GGWCC 3 cut(s) 281, 809, 1294
BaeGI GKGCMC 1 cut(s) 48
BamHI GGATCC 2 cut(s) 515, 1623
BanI GGYRCC 3 cut(s) 65, 778, 1638
BanII GRGCYC 2 cut(s) 31, 48
BbsI GAAGAC 2 cut(s) 1398, 1838
Bbv12I GWGCWC 1 cut(s) 31
BbvI GCAGC 3 cut(s) 977, 1373, 1904
BccI CCATC 6 cut(s) 115, 318, 1436, 1501, 1878, 1916
BciT130I CCWGG 3 cut(s) 49, 1659, 1743
BciVI GTATCC 1 cut(s) 172
BcoDI GTCTC 5 cut(s) 99, 256, 818, 1431, 1727
BfaI CTAG 2 cut(s) 621, 951
BfmI CTRYAG 1 cut(s) 1707
BfuAI ACCTGC 1 cut(s) 253
BfuI GTATCC 1 cut(s) 172
BglII AGATCT 1 cut(s) 627
BisI GCNGC 4 cut(s) 878, 991, 1362, 1893
BlsI GCNGC 4 cut(s) 879, 992, 1363, 1894
Bme1390I CCNGG 3 cut(s) 49, 1659, 1743
Bme18I GGWCC 3 cut(s) 281, 809, 1294
BmgT120I GGNCC 7 cut(s) 44, 45, 51, 281, 809, 1294, 1813
BmrFI CCNGG 3 cut(s) 49, 1659, 1743
BmrI ACTGGG 1 cut(s) 1381
BmsI GCATC 3 cut(s) 164, 1311, 1848
BmuI ACTGGG 1 cut(s) 1381
BoxI GACNNNNGTC 1 cut(s) 1088
BpiI GAAGAC 2 cut(s) 1398, 1838
BplI GAGNNNNNCTC 4 cut(s) 540, 572, 815, 847
BpmI CTGGAG 1 cut(s) 1358
Bpu14I TTCGAA 1 cut(s) 1572
BpuEI CTTGAG 2 cut(s) 65, 1790
BsaAI YACGTR 1 cut(s) 175
BsaBI GATNNNNATC 2 cut(s) 183, 339
BsaJI CCNNGG 4 cut(s) 47, 881, 1297, 1657
BsaWI WCCGGW 2 cut(s) 1231, 1957
Bsc4I CCNNNNNNNGG 2 cut(s) 887, 1318
Bse1I ACTGG 6 cut(s) 874, 1085, 1132, 1376, 1409, 1612
Bse8I GATNNNNATC 2 cut(s) 183, 339
BseAI TCCGGA 1 cut(s) 1231
BseBI CCWGG 3 cut(s) 49, 1659, 1743
BseDI CCNNGG 4 cut(s) 47, 881, 1297, 1657
BseGI GGATG 4 cut(s) 1231, 1302, 1909, 1927
BseJI GATNNNNATC 2 cut(s) 183, 339
BseLI CCNNNNNNNGG 2 cut(s) 887, 1318
BseMII CTCAG 4 cut(s) 251, 753, 1128, 1550
BseNI ACTGG 6 cut(s) 874, 1085, 1132, 1376, 1409, 1612
BseSI GKGCMC 1 cut(s) 48
BseXI GCAGC 3 cut(s) 977, 1373, 1904
BsgI GTGCAG 2 cut(s) 599, 1911
BshFI GGCC 7 cut(s) 46, 52, 880, 957, 1579, 1795, 1815
BshNI GGYRCC 3 cut(s) 65, 778, 1638
BsiHKAI GWGCWC 1 cut(s) 31
BsiSI CCGG 2 cut(s) 1232, 1958
BslFI GGGAC 1 cut(s) 294
BslI CCNNNNNNNGG 2 cut(s) 887, 1318
BsmAI GTCTC 5 cut(s) 99, 256, 818, 1431, 1727
BsmBI CGTCTC 2 cut(s) 99, 1431
BsmFI GGGAC 1 cut(s) 294
BsmI GAATGC 2 cut(s) 723, 1066
BsnI GGCC 7 cut(s) 46, 52, 880, 957, 1579, 1795, 1815
Bsp119I TTCGAA 1 cut(s) 1572
Bsp120I GGGCCC 1 cut(s) 44
Bsp1286I GDGCHC 2 cut(s) 31, 48
Bsp13I TCCGGA 1 cut(s) 1231
Bsp143I GATC 7 cut(s) 190, 515, 627, 1156, 1623, 1702, 1968
Bsp19I CCATGG 1 cut(s) 1297
BspACI CCGC 2 cut(s) 877, 1342
BspANI GGCC 7 cut(s) 46, 52, 880, 957, 1579, 1795, 1815
BspCNI CTCAG 4 cut(s) 252, 752, 1129, 1551
BspEI TCCGGA 1 cut(s) 1231
BspHI TCATGA 1 cut(s) 343
BspMAI CTGCAG 1 cut(s) 1711
BspMI ACCTGC 1 cut(s) 253
BspPI GGATC 7 cut(s) 510, 523, 1164, 1618, 1631, 1697, 1963
BspT104I TTCGAA 1 cut(s) 1572
BspT107I GGYRCC 3 cut(s) 65, 778, 1638
BsrBI CCGCTC 1 cut(s) 1342
BsrI ACTGG 6 cut(s) 874, 1085, 1132, 1376, 1409, 1612
BssECI CCNNGG 4 cut(s) 47, 881, 1297, 1657
BssMI GATC 7 cut(s) 190, 515, 627, 1156, 1623, 1702, 1968
BssT1I CCWWGG 2 cut(s) 881, 1297
Bst2UI CCWGG 3 cut(s) 49, 1659, 1743
Bst4CI ACNGT 5 cut(s) 65, 150, 205, 1243, 1442
Bst6I CTCTTC 1 cut(s) 220
BstBAI YACGTR 1 cut(s) 175
BstBI TTCGAA 1 cut(s) 1572
BstC8I GCNNGC 2 cut(s) 1055, 1211
BstDEI CTNAG 5 cut(s) 197, 260, 739, 1137, 1559
BstDSI CCRYGG 1 cut(s) 1297
BstF5I GGATG 4 cut(s) 1231, 1302, 1909, 1927
BstKTI GATC 7 cut(s) 193, 518, 630, 1159, 1626, 1705, 1971
BstMAI GTCTC 5 cut(s) 99, 256, 818, 1431, 1727
BstMBI GATC 7 cut(s) 190, 515, 627, 1156, 1623, 1702, 1968
BstMWI GCNNNNNNNGC 1 cut(s) 1706
BstNI CCWGG 3 cut(s) 49, 1659, 1743
BstNSI RCATGY 1 cut(s) 134
BstPAI GACNNNNGTC 1 cut(s) 1088
BstSCI CCNGG 3 cut(s) 47, 1657, 1741
BstSFI CTRYAG 1 cut(s) 1707
BstSLI GKGCMC 1 cut(s) 48
BstV1I GCAGC 3 cut(s) 977, 1373, 1904
BstV2I GAAGAC 2 cut(s) 1398, 1838
BstX2I RGATCY 4 cut(s) 515, 627, 1623, 1968
BstXI CCANNNNNNTGG 1 cut(s) 1922
BstYI RGATCY 4 cut(s) 515, 627, 1623, 1968
BsuI GTATCC 1 cut(s) 172
BsuRI GGCC 7 cut(s) 46, 52, 880, 957, 1579, 1795, 1815
BtgI CCRYGG 1 cut(s) 1297
BtsCI GGATG 4 cut(s) 1231, 1302, 1909, 1927
BtsI GCAGTG 1 cut(s) 1794
BtsIMutI CAGTG 5 cut(s) 1075, 1125, 1134, 1248, 1794
BveI ACCTGC 1 cut(s) 253
Cac8I GCNNGC 2 cut(s) 1055, 1211
CciI TCATGA 1 cut(s) 343
Cfr13I GGNCC 7 cut(s) 44, 45, 51, 281, 809, 1294, 1813
CseI GACGC 1 cut(s) 838
Csp6I GTAC 5 cut(s) 66, 172, 1376, 1759, 1851
CspCI CAANNNNNGTGG 3 cut(s) 1677, 1712, 1987
CviQI GTAC 5 cut(s) 66, 172, 1376, 1759, 1851
DdeI CTNAG 5 cut(s) 197, 260, 739, 1137, 1559
DpnI GATC 7 cut(s) 192, 517, 629, 1158, 1625, 1704, 1970
DpnII GATC 7 cut(s) 190, 515, 627, 1156, 1623, 1702, 1968
DraI TTTAAA 1 cut(s) 666
DraIII CACNNNGTG 1 cut(s) 1140
Eam1104I CTCTTC 1 cut(s) 220
EarI CTCTTC 1 cut(s) 220
Ecl136II GAGCTC 1 cut(s) 29
Eco130I CCWWGG 2 cut(s) 881, 1297
Eco24I GRGCYC 2 cut(s) 31, 48
Eco47I GGWCC 3 cut(s) 281, 809, 1294
Eco53kI GAGCTC 1 cut(s) 29
Eco57I CTGAAG 3 cut(s) 201, 345, 1479
EcoICRI GAGCTC 1 cut(s) 29
EcoO109I RGGNCCY 2 cut(s) 44, 281
EcoRI GAATTC 1 cut(s) 1930
EcoRII CCWGG 3 cut(s) 47, 1657, 1741
EcoT14I CCWWGG 2 cut(s) 881, 1297
EcoT22I ATGCAT 1 cut(s) 494
EcoT38I GRGCYC 2 cut(s) 31, 48
ErhI CCWWGG 2 cut(s) 881, 1297
Esp3I CGTCTC 2 cut(s) 99, 1431
FalI AAGNNNNNCTT 2 cut(s) 672, 704
FaqI GGGAC 1 cut(s) 294
FauI CCCGC 1 cut(s) 1335
FauNDI CATATG 1 cut(s) 1087
FblI GTMKAC 1 cut(s) 1077
Fnu4HI GCNGC 4 cut(s) 878, 991, 1362, 1893
FokI GGATG 4 cut(s) 1238, 1289, 1916, 1934
FriOI GRGCYC 2 cut(s) 31, 48
Fsp4HI GCNGC 4 cut(s) 878, 991, 1362, 1893
FspBI CTAG 2 cut(s) 621, 951
GluI GCNGC 4 cut(s) 878, 991, 1362, 1893
GsuI CTGGAG 1 cut(s) 1358
HaeIII GGCC 7 cut(s) 46, 52, 880, 957, 1579, 1795, 1815
HapII CCGG 2 cut(s) 1232, 1958
HgaI GACGC 1 cut(s) 838
HincII GTYRAC 2 cut(s) 321, 867
HindII GTYRAC 2 cut(s) 321, 867
HindIII AAGCTT 1 cut(s) 1051
HpaII CCGG 2 cut(s) 1232, 1958
Hpy166II GTNNAC 3 cut(s) 321, 867, 1078
Hpy8I GTNNAC 3 cut(s) 321, 867, 1078
HpyAV CCTTC 8 cut(s) 385, 437, 968, 1029, 1229, 1381, 1477, 1976
HpyCH4III ACNGT 5 cut(s) 65, 150, 205, 1243, 1442
HpyCH4IV ACGT 2 cut(s) 174, 1074
HpyF10VI GCNNNNNNNGC 1 cut(s) 1706
HpyF3I CTNAG 5 cut(s) 197, 260, 739, 1137, 1559
HpySE526I ACGT 2 cut(s) 174, 1074
KflI GGGWCCC 1 cut(s) 281
Kpn2I TCCGGA 1 cut(s) 1231
KpnI GGTACC 1 cut(s) 69
Kzo9I GATC 7 cut(s) 190, 515, 627, 1156, 1623, 1702, 1968
LmnI GCTCC 3 cut(s) 34, 1267, 1339
Lsp1109I GCAGC 3 cut(s) 977, 1373, 1904
LweI GCATC 3 cut(s) 164, 1311, 1848
MaeI CTAG 2 cut(s) 621, 951
MaeII ACGT 2 cut(s) 174, 1074
MalI GATC 7 cut(s) 192, 517, 629, 1158, 1625, 1704, 1970
MbiI CCGCTC 1 cut(s) 1342
MboI GATC 7 cut(s) 190, 515, 627, 1156, 1623, 1702, 1968
MfeI CAATTG 1 cut(s) 969
MflI RGATCY 4 cut(s) 515, 627, 1623, 1968
MhlI GDGCHC 2 cut(s) 31, 48
MluCI AATT 8 cut(s) 471, 503, 684, 969, 1532, 1797, 1857, 1930
MlyI GAGTC 5 cut(s) 742, 824, 1021, 1570, 1918
MmeI TCCRAC 3 cut(s) 381, 1435, 1449
Mph1103I ATGCAT 1 cut(s) 494
MroI TCCGGA 1 cut(s) 1231
MroXI GAANNNNTTC 1 cut(s) 1492
MseI TTAA 2 cut(s) 639, 665
MslI CAYNNNNRTG 3 cut(s) 497, 1244, 1920
MspA1I CMGCKG 1 cut(s) 1364
MspI CCGG 2 cut(s) 1232, 1958
MspR9I CCNGG 3 cut(s) 49, 1659, 1743
MunI CAATTG 1 cut(s) 969
Mva1269I GAATGC 2 cut(s) 723, 1066
MvaI CCWGG 3 cut(s) 49, 1659, 1743
MwoI GCNNNNNNNGC 1 cut(s) 1706
NcoI CCATGG 1 cut(s) 1297
NdeI CATATG 1 cut(s) 1087
NdeII GATC 7 cut(s) 190, 515, 627, 1156, 1623, 1702, 1968
NmuCI GTSAC 7 cut(s) 524, 1070, 1172, 1194, 1367, 1910, 1960
NsiI ATGCAT 1 cut(s) 494
NspI RCATGY 1 cut(s) 134
NspV TTCGAA 1 cut(s) 1572
OliI CACNNNNGTG 1 cut(s) 1244
PagI TCATGA 1 cut(s) 343
PciI ACATGT 1 cut(s) 130
PcsI WCGNNNNNNNCGW 1 cut(s) 516
PctI GAATGC 2 cut(s) 723, 1066
PdmI GAANNNNTTC 1 cut(s) 1492
PfeI GAWTC 7 cut(s) 4, 89, 585, 1514, 1569, 1718, 1954
PfoI TCCNGGA 1 cut(s) 1741
PkrI GCNGC 4 cut(s) 879, 992, 1363, 1894
PleI GAGTC 5 cut(s) 742, 824, 1020, 1569, 1917
PpsI GAGTC 5 cut(s) 742, 824, 1020, 1569, 1917
Ppu21I YACGTR 1 cut(s) 175
PpuMI RGGWCCY 1 cut(s) 281
PscI ACATGT 1 cut(s) 130
PshAI GACNNNNGTC 1 cut(s) 1088
PsiI TTATAA 1 cut(s) 426
Psp124BI GAGCTC 1 cut(s) 31
Psp5II RGGWCCY 1 cut(s) 281
Psp6I CCWGG 3 cut(s) 47, 1657, 1741
PspGI CCWGG 3 cut(s) 47, 1657, 1741
PspOMI GGGCCC 1 cut(s) 44
PspPI GGNCC 7 cut(s) 44, 45, 51, 281, 809, 1294, 1813
PspPPI RGGWCCY 1 cut(s) 281
PstI CTGCAG 1 cut(s) 1711
PsuI RGATCY 4 cut(s) 515, 627, 1623, 1968
PvuII CAGCTG 1 cut(s) 1364
RsaI GTAC 5 cut(s) 67, 173, 1377, 1760, 1852
RsaNI GTAC 5 cut(s) 66, 172, 1376, 1759, 1851
RseI CAYNNNNRTG 3 cut(s) 497, 1244, 1920
SacI GAGCTC 1 cut(s) 31
SaqAI TTAA 2 cut(s) 639, 665
SatI GCNGC 4 cut(s) 878, 991, 1362, 1893
Sau3AI GATC 7 cut(s) 190, 515, 627, 1156, 1623, 1702, 1968
Sau96I GGNCC 7 cut(s) 44, 45, 51, 281, 809, 1294, 1813
SchI GAGTC 5 cut(s) 742, 824, 1021, 1570, 1918
ScrFI CCNGG 3 cut(s) 49, 1659, 1743
SduI GDGCHC 2 cut(s) 31, 48
SfaNI GCATC 3 cut(s) 164, 1311, 1848
SfcI CTRYAG 1 cut(s) 1707
SfuI TTCGAA 1 cut(s) 1572
SinI GGWCC 3 cut(s) 281, 809, 1294
SmiMI CAYNNNNRTG 3 cut(s) 497, 1244, 1920
SmlI CTYRAG 2 cut(s) 80, 1769
SmoI CTYRAG 2 cut(s) 80, 1769
Sse9I AATT 8 cut(s) 471, 503, 684, 969, 1532, 1797, 1857, 1930
SsiI CCGC 2 cut(s) 877, 1342
SspI AATATT 1 cut(s) 979
SspMI CTAG 2 cut(s) 621, 951
SstI GAGCTC 1 cut(s) 31
StyD4I CCNGG 3 cut(s) 47, 1657, 1741
StyI CCWWGG 2 cut(s) 881, 1297
TaaI ACNGT 5 cut(s) 65, 150, 205, 1243, 1442
TaiI ACGT 2 cut(s) 177, 1077
TaqI TCGA 5 cut(s) 1118, 1435, 1567, 1572, 1716
TasI AATT 8 cut(s) 471, 503, 684, 969, 1532, 1797, 1857, 1930
TauI GCSGC 1 cut(s) 880
TfiI GAWTC 7 cut(s) 4, 89, 585, 1514, 1569, 1718, 1954
Tru1I TTAA 2 cut(s) 639, 665
Tru9I TTAA 2 cut(s) 639, 665
TscAI CASTG 5 cut(s) 1075, 1132, 1141, 1248, 1794
TseFI GTSAC 7 cut(s) 524, 1070, 1172, 1194, 1367, 1910, 1960
TseI GCWGC 3 cut(s) 990, 1361, 1892
Tsp45I GTSAC 7 cut(s) 524, 1070, 1172, 1194, 1367, 1910, 1960
TspDTI ATGAA 9 cut(s) 17, 404, 515, 684, 918, 1313, 1695, 1769, 1844
TspGWI ACGGA 3 cut(s) 508, 1024, 1280
TspRI CASTG 5 cut(s) 1075, 1132, 1141, 1248, 1794
VpaK11BI GGWCC 3 cut(s) 281, 809, 1294
XapI RAATTY 1 cut(s) 1930
XbaI TCTAGA 1 cut(s) 620
XceI RCATGY 1 cut(s) 134
XcmI CCANNNNNNNNNTGG 1 cut(s) 686
XmiI GTMKAC 1 cut(s) 1077
XmnI GAANNNNTTC 1 cut(s) 1492
XspI CTAG 2 cut(s) 621, 951
Zsp2I ATGCAT 1 cut(s) 494
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.