Rroxscaffold_2G00109480

Protein kinase domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000002
OG0001247
Physical Location & Seq
Forward (+)
33661522 .. 33665425
3904 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_2G00109480.1

Sequence Viewer

Length: 1860 bp
ATGGAGCAGCAAATTGCAAAAGAAAAGCCTGCAATTTCTTTCGAGTATGAGCTCTTTGAGGGAGACCCTGATCATCTAACAACTGTTGTAGCCGCACTGACTCCCACTAGTCCCTGGATCAATCCTGCCTCATTGAACTTTAAGTACCGAATTGGACGAGGCCCCTTTGGTGATGTATGGTTAGCAACTCATCACCAGTCAGCAGATGATTATGATGAATATCATGAGGTAGCAGTTAAGATGTTGCATCCTTTGACGGAGGAGGACAGAGAAAAGTTTCTGCACAAGTTCGAAAAGTTATTTTTCAAGTTCCGCAGACTGTGCGGTGTTTGTTGGTTTCATGGTATCTCAATCATTGATGGAAGGATCTGCATCGCTATGAAATTTTATGAGGGGTCAGTTGGTGACCGAGTTGCTAGGTTGAAGGGTGGAAAACTTCAACTTTTTGATGTTTTAAGGTATGGGATTGAGTTGGCAAAAGGAATTTCAGAATTGCATTCACTAGGGCTTCTGGTGCTAAACTTGAAGCCGTCCAACATCCTTGTAGATGAACACGGCCAGGTGGTCCTTGGAGATTTTGGAATCCCATTTCTACTTCTTGGGGCTGCATTGTCTAATCCTAATATGGCTTTTAGACTTGGCACTCCAAACTACATGGCTCCAGAACAGTGGGAACCAGAAGTGAGGGGTCCTTTATCTTTAGAAACAGATTCTTGGGGCTTTGGATGTTGCTTTGTAGAGATGTTGACTGGTAGTCAACCCTGGTTTGGGAGTTCAATTAAAGAAATATATCATTCAGTTGTGATCAAGCGAGAAAAGCCACCTGTTCCAAGCGGTTTGCCTCCTGCAGTGGAGAATGTTATCAACGGCTGCTTTGAGTATGATCTCCGTAGTAGGCCTTCAATGGAAGATATCATACGTGCATTGGAAAGCTCACAAAAAGATGTTCAAAGCGATGGAGAATGGCTTGGTTTAGGGAGCAGCACACCTGCTGGAAAACTTAGTAGCGGCAGTTATAGTGCGTGGCATCTCTTAAAAGATGATCTCCAGGTTGGAGACATAGTTCGCTCCAGAAAGCCAGTAAATGCACGCAAGCGTCAAGCTCTTGATGTCCCTGAAGGAATTGTAACTGGCCTGGAAAGTGATTCTGGTAGTGCCCTGGTGAAGATCCCTCGAGCGCGCAAGCCTGTCAGAGTATCAGTGTCAACACTTGAGAGAGTCACATCTGGCTTGACAGCAGGTGATTGGGTGCGGTTGAAGGGAGAACTGCACAAGCACTCTCCTGTTGGAATTCTTCATTCTATACAACGGGATGGAAGTGTTGCTGTTGGATTTATTGGGCTAGAGACTCTATGGAGAGGGAAATCATCTGACATTGAAATGGCTGATGCATATTATGTAGGAGAGTTTGTGAGGCTGAAGGCGAATGTGGTTTCTCCCAGATTTGAGTGGCCTCATAAGGGTGGAGGTGGGGCATGGGCTACTGGAAGAATCTCACAAGTCCTTCCGAATGGTTGTCTGGTTGTGAGGTTCCCTGGAAGATTGGAATTTGGAGATGAAGCTCGTAGCTTCTTGGCAGATCCATATGAAGTAGAACTAGTGTCCTTTGATACTTGTCCTGGTCTGGTCGAAAAATATCAACATGTTGAGGATTTTCACTGGGCAGTCAGGCCACTTACAATTGCATTTGGTCTCTTTACAGCCATGAAGTTCAGCTTGTTTGTTGGACGAAATGTAAGCGCAAGGGTGAAAGGCCGAAGAAACTCACTACAGGGCCAGAGCGGTGGAAGTTCAGCTTGGCTTCCTCCGCCGGTTGCAAATCTTTTCAAAGAAGGTTCTTCTACTGCTACTGCTAGGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0001101 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004842 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005769 GO:0005794 GO:0005802 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006810 GO:0006950 GO:0006952 GO:0007034 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0009719 GO:0009725 GO:0009737 GO:0009738 GO:0009755 GO:0009787 GO:0009788 GO:0009966 GO:0009968 GO:0009987 GO:0010033 GO:0010646 GO:0010648 GO:0012505 GO:0016192 GO:0016197 GO:0016301 GO:0016310 GO:0016567 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0019787 GO:0023051 GO:0023052 GO:0023057 GO:0031410 GO:0031982 GO:0031984 GO:0032446 GO:0032502 GO:0032870 GO:0032940 GO:0033993 GO:0036211 GO:0040007 GO:0042221 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043621 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044431 GO:0044444 GO:0044446 GO:0044464 GO:0045324 GO:0046903 GO:0046907 GO:0048519 GO:0048523 GO:0048583 GO:0048585 GO:0048589 GO:0050789 GO:0050794 GO:0050896 GO:0051179 GO:0051234 GO:0051641 GO:0051649 GO:0051716 GO:0065007 GO:0070647 GO:0070887 GO:0071215 GO:0071229 GO:0071310 GO:0071396 GO:0071495 GO:0071704 GO:0097305 GO:0097306 GO:0097708 GO:0098791 GO:0140096 GO:1901419 GO:1901420 GO:1901564 GO:1901700 GO:1901701 GO:1905957 GO:1905958
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DOG1 Pkinase Pkinase_Tyr

Protein Analysis

619

Amino Acids

68.49

Weight (kDa)

6.8

Isoelectric Point (pI)

38.02

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PK_Tyr_Ser-Thr PF07714 46 - 309 3.8e-31 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 48 - 306 1.6e-27 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 997, 1229
Acc36I ACCTGC 2 cut(s) 997, 1229
AccBSI CCGCTC 1 cut(s) 1782
AccII CGCG 1 cut(s) 1180
AciI CCGC 8 cut(s) 93, 313, 324, 834, 1008, 1252, 1782, 1808
AclWI GGATC 4 cut(s) 125, 374, 1162, 1574
AcoI YGGCCR 1 cut(s) 556
AcsI RAATTY 4 cut(s) 383, 483, 1290, 1547
AcuI CTGAAG 2 cut(s) 1137, 1439
AfaI GTAC 1 cut(s) 146
AfiI CCNNNNNNNGG 3 cut(s) 767, 768, 1460
AflIII ACRYGT 1 cut(s) 1642
AhdI GACNNNNNGTC 1 cut(s) 753
AhlI ACTAGT 2 cut(s) 107, 1597
AjnI CCWGG 8 cut(s) 113, 558, 761, 1047, 1134, 1158, 1534, 1618
AjuI GAANNNNNNNTTGG 2 cut(s) 1780, 1812
AloI GAACNNNNNNTCC 2 cut(s) 1047, 1079
AluBI AGCT 7 cut(s) 52, 933, 1103, 1562, 1569, 1716, 1796
AluI AGCT 7 cut(s) 52, 933, 1103, 1562, 1569, 1716, 1796
Alw21I GWGCWC 1 cut(s) 54
Alw26I GTCTC 4 cut(s) 57, 1050, 1340, 1697
AlwI GGATC 4 cut(s) 125, 374, 1162, 1574
Ama87I CYCGRG 1 cut(s) 1173
AoxI GGCC 8 cut(s) 160, 556, 896, 1132, 1451, 1670, 1753, 1774
ApeKI GCWGC 4 cut(s) 7, 605, 870, 981
ApoI RAATTY 4 cut(s) 383, 483, 1290, 1547
Asp700I GAANNNNTTC 1 cut(s) 276
AspLEI GCGC 3 cut(s) 1180, 1182, 1742
AspS9I GGNCC 4 cut(s) 161, 565, 689, 1774
AsuHPI GGTGA 6 cut(s) 182, 185, 416, 1174, 1253, 1759
AsuII TTCGAA 1 cut(s) 291
AvaI CYCGRG 1 cut(s) 1173
AvaII GGWCC 2 cut(s) 565, 689
BaeGI GKGCMC 1 cut(s) 1159
BanII GRGCYC 1 cut(s) 54
BarI GAAGNNNNNNTAC 4 cut(s) 883, 900, 915, 932
Bbv12I GWGCWC 1 cut(s) 54
BbvI GCAGC 4 cut(s) 19, 592, 857, 993
BccI CCATC 3 cut(s) 353, 950, 1307
BceAI ACGGC 3 cut(s) 514, 571, 883
BciT130I CCWGG 8 cut(s) 115, 560, 763, 1049, 1136, 1160, 1536, 1620
BclI TGATCA 2 cut(s) 70, 804
BcoDI GTCTC 4 cut(s) 57, 1050, 1340, 1697
BcuI ACTAGT 2 cut(s) 107, 1597
BfaI CTAG 6 cut(s) 108, 417, 503, 1343, 1598, 1854
BfmI CTRYAG 2 cut(s) 846, 1769
BfuAI ACCTGC 2 cut(s) 997, 1229
BisI GCNGC 6 cut(s) 8, 93, 606, 871, 982, 1009
BlsI GCNGC 6 cut(s) 9, 94, 607, 872, 983, 1010
Bme1390I CCNGG 8 cut(s) 115, 560, 763, 1049, 1136, 1160, 1536, 1620
Bme18I GGWCC 2 cut(s) 565, 689
BmeRI GACNNNNNGTC 1 cut(s) 753
BmeT110I CYCGRG 1 cut(s) 1173
BmgT120I GGNCC 4 cut(s) 161, 565, 689, 1774
BmiI GGNNCC 5 cut(s) 163, 660, 675, 690, 1532
BmrFI CCNGG 8 cut(s) 115, 560, 763, 1049, 1136, 1160, 1536, 1620
BmrI ACTGGG 1 cut(s) 1669
BmsI GCATC 4 cut(s) 256, 381, 1036, 1378
BmuI ACTGGG 1 cut(s) 1669
BpmI CTGGAG 3 cut(s) 645, 1031, 1054
Bpu14I TTCGAA 1 cut(s) 291
BpuEI CTTGAG 1 cut(s) 1232
BsaAI YACGTR 1 cut(s) 920
BsaBI GATNNNNATC 2 cut(s) 219, 371
BsaI GGTCTC 2 cut(s) 57, 1697
BsaJI CCNNGG 5 cut(s) 113, 568, 761, 1158, 1534
BsaXI ACNNNNNCTCC 4 cut(s) 1047, 1077, 1395, 1425
Bsc4I CCNNNNNNNGG 3 cut(s) 767, 768, 1460
Bse118I RCCGGY 1 cut(s) 1810
Bse1I ACTGG 6 cut(s) 196, 754, 1079, 1135, 1489, 1664
Bse8I GATNNNNATC 2 cut(s) 219, 371
BseBI CCWGG 8 cut(s) 115, 560, 763, 1049, 1136, 1160, 1536, 1620
BseDI CCNNGG 5 cut(s) 113, 568, 761, 1158, 1534
BseGI GGATG 4 cut(s) 247, 537, 731, 1318
BseJI GATNNNNATC 2 cut(s) 219, 371
BseLI CCNNNNNNNGG 3 cut(s) 767, 768, 1460
BseNI ACTGG 6 cut(s) 196, 754, 1079, 1135, 1489, 1664
BsePI GCGCGC 1 cut(s) 1178
BseRI GAGGAG 1 cut(s) 275
BseSI GKGCMC 1 cut(s) 1159
BseXI GCAGC 4 cut(s) 19, 592, 857, 993
BsgI GTGCAG 2 cut(s) 266, 1253
Bsh1236I CGCG 1 cut(s) 1180
BshFI GGCC 8 cut(s) 162, 558, 898, 1134, 1453, 1672, 1755, 1776
BsiHKAI GWGCWC 1 cut(s) 54
BsiHKCI CYCGRG 1 cut(s) 1173
BsiSI CCGG 1 cut(s) 1811
BslFI GGGAC 2 cut(s) 96, 1097
BslI CCNNNNNNNGG 3 cut(s) 767, 768, 1460
BsmAI GTCTC 4 cut(s) 57, 1050, 1340, 1697
BsmFI GGGAC 2 cut(s) 96, 1097
BsmI GAATGC 1 cut(s) 496
BsnI GGCC 8 cut(s) 162, 558, 898, 1134, 1453, 1672, 1755, 1776
Bso31I GGTCTC 2 cut(s) 57, 1697
BsoBI CYCGRG 1 cut(s) 1173
Bsp119I TTCGAA 1 cut(s) 291
Bsp1286I GDGCHC 2 cut(s) 54, 1159
Bsp143I GATC 8 cut(s) 70, 117, 366, 804, 883, 1042, 1167, 1579
BspACI CCGC 8 cut(s) 93, 313, 324, 834, 1008, 1252, 1782, 1808
BspANI GGCC 8 cut(s) 162, 558, 898, 1134, 1453, 1672, 1755, 1776
BspFNI CGCG 1 cut(s) 1180
BspHI TCATGA 1 cut(s) 223
BspLI GGNNCC 5 cut(s) 163, 660, 675, 690, 1532
BspMAI CTGCAG 1 cut(s) 850
BspMI ACCTGC 2 cut(s) 997, 1229
BspPI GGATC 4 cut(s) 125, 374, 1162, 1574
BspT104I TTCGAA 1 cut(s) 291
BspTNI GGTCTC 2 cut(s) 57, 1697
BsrBI CCGCTC 1 cut(s) 1782
BsrFI RCCGGY 1 cut(s) 1810
BsrI ACTGG 6 cut(s) 196, 754, 1079, 1135, 1489, 1664
BssAI RCCGGY 1 cut(s) 1810
BssECI CCNNGG 5 cut(s) 113, 568, 761, 1158, 1534
BssHII GCGCGC 1 cut(s) 1178
BssMI GATC 8 cut(s) 70, 117, 366, 804, 883, 1042, 1167, 1579
BssT1I CCWWGG 1 cut(s) 568
Bst2UI CCWGG 8 cut(s) 115, 560, 763, 1049, 1136, 1160, 1536, 1620
Bst4CI ACNGT 3 cut(s) 85, 321, 669
BstAPI GCANNNNNTGC 1 cut(s) 321
BstBAI YACGTR 1 cut(s) 920
BstBI TTCGAA 1 cut(s) 291
BstC8I GCNNGC 5 cut(s) 30, 1090, 1094, 1180, 1184
BstDEI CTNAG 1 cut(s) 1001
BstEII GGTNACC 1 cut(s) 404
BstF5I GGATG 4 cut(s) 247, 537, 731, 1318
BstFNI CGCG 1 cut(s) 1180
BstHHI GCGC 3 cut(s) 1180, 1182, 1742
BstKTI GATC 8 cut(s) 73, 120, 369, 807, 886, 1045, 1170, 1582
BstMAI GTCTC 4 cut(s) 57, 1050, 1340, 1697
BstMBI GATC 8 cut(s) 70, 117, 366, 804, 883, 1042, 1167, 1579
BstMWI GCNNNNNNNGC 4 cut(s) 321, 514, 817, 1807
BstNI CCWGG 8 cut(s) 115, 560, 763, 1049, 1136, 1160, 1536, 1620
BstNSI RCATGY 1 cut(s) 1646
BstPI GGTNACC 1 cut(s) 404
BstSCI CCNGG 8 cut(s) 113, 558, 761, 1047, 1134, 1158, 1534, 1618
BstSFI CTRYAG 2 cut(s) 846, 1769
BstSLI GKGCMC 1 cut(s) 1159
BstUI CGCG 1 cut(s) 1180
BstV1I GCAGC 4 cut(s) 19, 592, 857, 993
BstX2I RGATCY 3 cut(s) 366, 1167, 1579
BstXI CCANNNNNNTGG 2 cut(s) 669, 1784
BstYI RGATCY 3 cut(s) 366, 1167, 1579
BsuRI GGCC 8 cut(s) 162, 558, 898, 1134, 1453, 1672, 1755, 1776
BtgZI GCGATG 2 cut(s) 358, 969
BtsCI GGATG 4 cut(s) 247, 537, 731, 1318
BtsI GCAGTG 1 cut(s) 855
BtsIMutI CAGTG 5 cut(s) 95, 674, 855, 1206, 1657
BveI ACCTGC 2 cut(s) 997, 1229
Cac8I GCNNGC 5 cut(s) 30, 1090, 1094, 1180, 1184
CciI TCATGA 1 cut(s) 223
CfoI GCGC 3 cut(s) 1180, 1182, 1742
Cfr10I RCCGGY 1 cut(s) 1810
Cfr13I GGNCC 4 cut(s) 161, 565, 689, 1774
CseI GACGC 1 cut(s) 1085
Csp6I GTAC 1 cut(s) 145
CviAII CATG 6 cut(s) 224, 341, 655, 1476, 1643, 1705
CviQI GTAC 1 cut(s) 145
DdeI CTNAG 1 cut(s) 1001
DpnI GATC 8 cut(s) 72, 119, 368, 806, 885, 1044, 1169, 1581
DpnII GATC 8 cut(s) 70, 117, 366, 804, 883, 1042, 1167, 1579
DriI GACNNNNNGTC 1 cut(s) 753
EaeI YGGCCR 1 cut(s) 556
Eam1105I GACNNNNNGTC 1 cut(s) 753
EciI GGCGGA 1 cut(s) 1797
Ecl136II GAGCTC 1 cut(s) 52
Eco130I CCWWGG 1 cut(s) 568
Eco147I AGGCCT 1 cut(s) 898
Eco24I GRGCYC 1 cut(s) 54
Eco31I GGTCTC 2 cut(s) 57, 1697
Eco32I GATATC 1 cut(s) 913
Eco47I GGWCC 2 cut(s) 565, 689
Eco53kI GAGCTC 1 cut(s) 52
Eco57I CTGAAG 2 cut(s) 1137, 1439
Eco88I CYCGRG 1 cut(s) 1173
Eco91I GGTNACC 1 cut(s) 404
EcoICRI GAGCTC 1 cut(s) 52
EcoO109I RGGNCCY 2 cut(s) 161, 689
EcoO65I GGTNACC 1 cut(s) 404
EcoRI GAATTC 1 cut(s) 1290
EcoRII CCWGG 8 cut(s) 113, 558, 761, 1047, 1134, 1158, 1534, 1618
EcoRV GATATC 1 cut(s) 913
EcoT14I CCWWGG 1 cut(s) 568
EcoT22I ATGCAT 1 cut(s) 1393
EcoT38I GRGCYC 1 cut(s) 54
ErhI CCWWGG 1 cut(s) 568
FaeI CATG 6 cut(s) 227, 344, 658, 1479, 1646, 1708
FalI AAGNNNNNCTT 4 cut(s) 1700, 1732, 1780, 1812
FaqI GGGAC 2 cut(s) 96, 1097
FatI CATG 6 cut(s) 223, 340, 654, 1475, 1642, 1704
FauNDI CATATG 1 cut(s) 1585
FbaI TGATCA 2 cut(s) 70, 804
Fnu4HI GCNGC 6 cut(s) 8, 93, 606, 871, 982, 1009
FokI GGATG 4 cut(s) 234, 524, 738, 1325
FriOI GRGCYC 1 cut(s) 54
Fsp4HI GCNGC 6 cut(s) 8, 93, 606, 871, 982, 1009
FspBI CTAG 6 cut(s) 108, 417, 503, 1343, 1598, 1854
GlaI GCGC 3 cut(s) 1179, 1181, 1741
GluI GCNGC 6 cut(s) 8, 93, 606, 871, 982, 1009
GsuI CTGGAG 3 cut(s) 645, 1031, 1054
HaeIII GGCC 8 cut(s) 162, 558, 898, 1134, 1453, 1672, 1755, 1776
HapII CCGG 1 cut(s) 1811
HgaI GACGC 1 cut(s) 1085
HhaI GCGC 3 cut(s) 1180, 1182, 1742
Hin1II CATG 6 cut(s) 227, 344, 658, 1479, 1646, 1708
Hin6I GCGC 3 cut(s) 1178, 1180, 1740
HinP1I GCGC 3 cut(s) 1178, 1180, 1740
HincII GTYRAC 3 cut(s) 747, 758, 1206
HindII GTYRAC 3 cut(s) 747, 758, 1206
HinfI GANTC 7 cut(s) 100, 582, 710, 1145, 1218, 1348, 1491
HpaII CCGG 1 cut(s) 1811
HphI GGTGA 6 cut(s) 182, 185, 416, 1174, 1253, 1759
Hpy166II GTNNAC 3 cut(s) 747, 758, 1206
Hpy188I TCNGA 4 cut(s) 490, 1193, 1372, 1509
Hpy188III TCNNGA 4 cut(s) 224, 662, 1071, 1106
Hpy8I GTNNAC 3 cut(s) 747, 758, 1206
HpyAV CCTTC 8 cut(s) 357, 418, 909, 1112, 1252, 1414, 1514, 1826
HpyCH4III ACNGT 3 cut(s) 85, 321, 669
HpyCH4IV ACGT 1 cut(s) 919
HpyF10VI GCNNNNNNNGC 4 cut(s) 321, 514, 817, 1807
HpyF3I CTNAG 1 cut(s) 1001
HpySE526I ACGT 1 cut(s) 919
Hsp92II CATG 6 cut(s) 227, 344, 658, 1479, 1646, 1708
HspAI GCGC 3 cut(s) 1178, 1180, 1740
Ksp22I TGATCA 2 cut(s) 70, 804
Kzo9I GATC 8 cut(s) 70, 117, 366, 804, 883, 1042, 1167, 1579
LmnI GCTCC 4 cut(s) 4, 664, 978, 1073
Lsp1109I GCAGC 4 cut(s) 19, 592, 857, 993
LweI GCATC 4 cut(s) 256, 381, 1036, 1378
MaeI CTAG 6 cut(s) 108, 417, 503, 1343, 1598, 1854
MaeII ACGT 1 cut(s) 919
MaeIII GTNAC 3 cut(s) 404, 1126, 1219
MalI GATC 8 cut(s) 72, 119, 368, 806, 885, 1044, 1169, 1581
MbiI CCGCTC 1 cut(s) 1782
MboI GATC 8 cut(s) 70, 117, 366, 804, 883, 1042, 1167, 1579
MboII GAAGA 7 cut(s) 920, 1177, 1286, 1500, 1551, 1770, 1830
MfeI CAATTG 1 cut(s) 1680
MflI RGATCY 3 cut(s) 366, 1167, 1579
MhlI GDGCHC 2 cut(s) 54, 1159
MlyI GAGTC 3 cut(s) 94, 1227, 1342
MmeI TCCRAC 5 cut(s) 558, 1033, 1267, 1309, 1705
Mph1103I ATGCAT 1 cut(s) 1393
MroXI GAANNNNTTC 1 cut(s) 276
MseI TTAA 5 cut(s) 141, 237, 455, 780, 1034
MslI CAYNNNNRTG 3 cut(s) 377, 1379, 1461
MspI CCGG 1 cut(s) 1811
MspR9I CCNGG 8 cut(s) 115, 560, 763, 1049, 1136, 1160, 1536, 1620
MunI CAATTG 1 cut(s) 1680
Mva1269I GAATGC 1 cut(s) 496
MvaI CCWGG 8 cut(s) 115, 560, 763, 1049, 1136, 1160, 1536, 1620
MvnI CGCG 1 cut(s) 1180
MwoI GCNNNNNNNGC 4 cut(s) 321, 514, 817, 1807
NdeI CATATG 1 cut(s) 1585
NdeII GATC 8 cut(s) 70, 117, 366, 804, 883, 1042, 1167, 1579
NlaIII CATG 6 cut(s) 227, 344, 658, 1479, 1646, 1708
NlaIV GGNNCC 5 cut(s) 163, 660, 675, 690, 1532
NmuCI GTSAC 2 cut(s) 404, 1219
NsiI ATGCAT 1 cut(s) 1393
NspI RCATGY 1 cut(s) 1646
NspV TTCGAA 1 cut(s) 291
PaeR7I CTCGAG 1 cut(s) 1173
PagI TCATGA 1 cut(s) 223
PaqCI CACCTGC 2 cut(s) 997, 1229
PauI GCGCGC 1 cut(s) 1178
PceI AGGCCT 1 cut(s) 898
PciI ACATGT 1 cut(s) 1642
PctI GAATGC 1 cut(s) 496
PdmI GAANNNNTTC 1 cut(s) 276
PfeI GAWTC 4 cut(s) 582, 710, 1145, 1491
PkrI GCNGC 6 cut(s) 9, 94, 607, 872, 983, 1010
PleI GAGTC 3 cut(s) 94, 1226, 1342
PpsI GAGTC 3 cut(s) 94, 1226, 1342
Ppu21I YACGTR 1 cut(s) 920
PpuMI RGGWCCY 1 cut(s) 689
PscI ACATGT 1 cut(s) 1642
Psp124BI GAGCTC 1 cut(s) 54
Psp5II RGGWCCY 1 cut(s) 689
Psp6I CCWGG 8 cut(s) 113, 558, 761, 1047, 1134, 1158, 1534, 1618
PspEI GGTNACC 1 cut(s) 404
PspGI CCWGG 8 cut(s) 113, 558, 761, 1047, 1134, 1158, 1534, 1618
PspN4I GGNNCC 5 cut(s) 163, 660, 675, 690, 1532
PspPI GGNCC 4 cut(s) 161, 565, 689, 1774
PspPPI RGGWCCY 1 cut(s) 689
PspXI VCTCGAGB 1 cut(s) 1173
PsrI GAACNNNNNNTAC 2 cut(s) 128, 160
PstI CTGCAG 1 cut(s) 850
PsuI RGATCY 3 cut(s) 366, 1167, 1579
PteI GCGCGC 1 cut(s) 1178
RsaI GTAC 1 cut(s) 146
RsaNI GTAC 1 cut(s) 145
RseI CAYNNNNRTG 3 cut(s) 377, 1379, 1461
SacI GAGCTC 1 cut(s) 54
SaqAI TTAA 5 cut(s) 141, 237, 455, 780, 1034
SatI GCNGC 6 cut(s) 8, 93, 606, 871, 982, 1009
Sau3AI GATC 8 cut(s) 70, 117, 366, 804, 883, 1042, 1167, 1579
Sau96I GGNCC 4 cut(s) 161, 565, 689, 1774
SchI GAGTC 3 cut(s) 94, 1227, 1342
ScrFI CCNGG 8 cut(s) 115, 560, 763, 1049, 1136, 1160, 1536, 1620
SduI GDGCHC 2 cut(s) 54, 1159
SfaNI GCATC 4 cut(s) 256, 381, 1036, 1378
SfcI CTRYAG 2 cut(s) 846, 1769
Sfr274I CTCGAG 1 cut(s) 1173
SfuI TTCGAA 1 cut(s) 291
SinI GGWCC 2 cut(s) 565, 689
SlaI CTCGAG 1 cut(s) 1173
SmiMI CAYNNNNRTG 3 cut(s) 377, 1379, 1461
SmlI CTYRAG 2 cut(s) 1173, 1211
SmoI CTYRAG 2 cut(s) 1173, 1211
SpeI ACTAGT 2 cut(s) 107, 1597
SseBI AGGCCT 1 cut(s) 898
SsiI CCGC 8 cut(s) 93, 313, 324, 834, 1008, 1252, 1782, 1808
SspMI CTAG 6 cut(s) 108, 417, 503, 1343, 1598, 1854
SstI GAGCTC 1 cut(s) 54
StuI AGGCCT 1 cut(s) 898
StyD4I CCNGG 8 cut(s) 113, 558, 761, 1047, 1134, 1158, 1534, 1618
StyI CCWWGG 1 cut(s) 568
TaaI ACNGT 3 cut(s) 85, 321, 669
TaiI ACGT 1 cut(s) 922
TaqI TCGA 4 cut(s) 42, 291, 1174, 1629
TaqII GACCGA 1 cut(s) 423
TauI GCSGC 2 cut(s) 95, 1011
TfiI GAWTC 4 cut(s) 582, 710, 1145, 1491
Tru1I TTAA 5 cut(s) 141, 237, 455, 780, 1034
Tru9I TTAA 5 cut(s) 141, 237, 455, 780, 1034
TscAI CASTG 5 cut(s) 102, 674, 855, 1206, 1664
TseFI GTSAC 2 cut(s) 404, 1219
TseI GCWGC 4 cut(s) 7, 605, 870, 981
Tsp45I GTSAC 2 cut(s) 404, 1219
TspDTI ATGAA 8 cut(s) 231, 329, 395, 564, 1286, 1572, 1602, 1721
TspGWI ACGGA 2 cut(s) 272, 878
TspRI CASTG 5 cut(s) 102, 674, 855, 1206, 1664
VpaK11BI GGWCC 2 cut(s) 565, 689
XapI RAATTY 4 cut(s) 383, 483, 1290, 1547
XceI RCATGY 1 cut(s) 1646
XcmI CCANNNNNNNNNTGG 1 cut(s) 566
XhoI CTCGAG 1 cut(s) 1173
XmnI GAANNNNTTC 1 cut(s) 276
XspI CTAG 6 cut(s) 108, 417, 503, 1343, 1598, 1854
Zsp2I ATGCAT 1 cut(s) 1393
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.