Aminotransferase class-V
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr4g0390731 RchiOBHm_Chr5g0024111 |
| rosa_multiflora | Rmu_sc0004031.1_g000007 Rmu_sc0013809.1_g000011 Rmu_sc0034927.1_g000001 |
| rosa_rugosa | Rorug03G0108500 Rorug04G0346300 Rorug05G0081600 Rorug06G0311200 Rorug07G0213800 |
| rosa_samantha | Rh1DG023500 Rh1DG057300 Rh2BG158100 Rh2BG387200 Rh2BG406800 Rh2BG533000 Rh2CG336200 Rh3BG347400 Rh3CG300700 Rh4CG141500 Rh4CG158300 Rh4DG375200 Rh5BG362200 Rh6CG135300 Rh6CG212500 Rh7CG199100 Rh7DG321700 Rh7DG335400 Rh7DG393400 |
| rosa_wichuraiana | Rw4G014540 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 185 |
| AciI | CCGC | 2 cut(s) | 56, 159 |
| AclWI | GGATC | 1 cut(s) | 203 |
| AcsI | RAATTY | 1 cut(s) | 164 |
| AgsI | TTSAA | 2 cut(s) | 36, 102 |
| AjnI | CCWGG | 1 cut(s) | 237 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 55, 87, 119, 151 |
| AluBI | AGCT | 1 cut(s) | 210 |
| AluI | AGCT | 1 cut(s) | 210 |
| AlwI | GGATC | 1 cut(s) | 203 |
| AoxI | GGCC | 2 cut(s) | 66, 240 |
| ApeKI | GCWGC | 1 cut(s) | 249 |
| ApoI | RAATTY | 1 cut(s) | 164 |
| AspS9I | GGNCC | 2 cut(s) | 216, 241 |
| AsuC2I | CCSGG | 1 cut(s) | 193 |
| AvaII | GGWCC | 1 cut(s) | 216 |
| BbvI | GCAGC | 1 cut(s) | 236 |
| BccI | CCATC | 1 cut(s) | 252 |
| BceAI | ACGGC | 1 cut(s) | 109 |
| BciT130I | CCWGG | 1 cut(s) | 239 |
| BcnI | CCSGG | 1 cut(s) | 193 |
| BisI | GCNGC | 2 cut(s) | 159, 250 |
| BlsI | GCNGC | 2 cut(s) | 160, 251 |
| Bme1390I | CCNGG | 2 cut(s) | 193, 239 |
| Bme18I | GGWCC | 1 cut(s) | 216 |
| BmgT120I | GGNCC | 2 cut(s) | 216, 241 |
| BmiI | GGNNCC | 1 cut(s) | 217 |
| BmrFI | CCNGG | 2 cut(s) | 193, 239 |
| BpuMI | CCSGG | 1 cut(s) | 193 |
| BseBI | CCWGG | 1 cut(s) | 239 |
| BseXI | GCAGC | 1 cut(s) | 236 |
| BshFI | GGCC | 2 cut(s) | 68, 242 |
| BsiSI | CCGG | 1 cut(s) | 193 |
| BsnI | GGCC | 2 cut(s) | 68, 242 |
| Bsp143I | GATC | 1 cut(s) | 195 |
| BspACI | CCGC | 2 cut(s) | 56, 159 |
| BspANI | GGCC | 2 cut(s) | 68, 242 |
| BspLI | GGNNCC | 1 cut(s) | 217 |
| BspPI | GGATC | 1 cut(s) | 203 |
| BssMI | GATC | 1 cut(s) | 195 |
| Bst2UI | CCWGG | 1 cut(s) | 239 |
| Bst6I | CTCTTC | 1 cut(s) | 76 |
| BstKTI | GATC | 1 cut(s) | 198 |
| BstMBI | GATC | 1 cut(s) | 195 |
| BstNI | CCWGG | 1 cut(s) | 239 |
| BstSCI | CCNGG | 2 cut(s) | 191, 237 |
| BstV1I | GCAGC | 1 cut(s) | 236 |
| BsuRI | GGCC | 2 cut(s) | 68, 242 |
| BtgZI | GCGATG | 1 cut(s) | 230 |
| Cfr13I | GGNCC | 2 cut(s) | 216, 241 |
| CviJI | RGCY | 4 cut(s) | 68, 124, 210, 242 |
| CviKI_1 | RGCY | 4 cut(s) | 68, 124, 210, 242 |
| DpnI | GATC | 1 cut(s) | 197 |
| DpnII | GATC | 1 cut(s) | 195 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 185 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 185 |
| Eam1104I | CTCTTC | 1 cut(s) | 76 |
| EarI | CTCTTC | 1 cut(s) | 76 |
| EciI | GGCGGA | 1 cut(s) | 45 |
| Eco47I | GGWCC | 1 cut(s) | 216 |
| EcoO109I | RGGNCCY | 1 cut(s) | 216 |
| EcoRI | GAATTC | 1 cut(s) | 164 |
| EcoRII | CCWGG | 1 cut(s) | 237 |
| Fnu4HI | GCNGC | 2 cut(s) | 159, 250 |
| Fsp4HI | GCNGC | 2 cut(s) | 159, 250 |
| GluI | GCNGC | 2 cut(s) | 159, 250 |
| HaeIII | GGCC | 2 cut(s) | 68, 242 |
| HapII | CCGG | 1 cut(s) | 193 |
| HinfI | GANTC | 2 cut(s) | 98, 227 |
| HpaII | CCGG | 1 cut(s) | 193 |
| Hpy99I | CGWCG | 1 cut(s) | 27 |
| HpyCH4IV | ACGT | 1 cut(s) | 143 |
| HpySE526I | ACGT | 1 cut(s) | 143 |
| Kzo9I | GATC | 1 cut(s) | 195 |
| LpnPI | CCDG | 5 cut(s) | 206, 224, 232, 238, 251 |
| Lsp1109I | GCAGC | 1 cut(s) | 236 |
| MaeII | ACGT | 1 cut(s) | 143 |
| MalI | GATC | 1 cut(s) | 197 |
| MboI | GATC | 1 cut(s) | 195 |
| MboII | GAAGA | 1 cut(s) | 63 |
| MluCI | AATT | 1 cut(s) | 164 |
| MlyI | GAGTC | 1 cut(s) | 221 |
| MnlI | CCTC | 6 cut(s) | 24, 63, 79, 98, 124, 157 |
| MspI | CCGG | 1 cut(s) | 193 |
| MspR9I | CCNGG | 2 cut(s) | 193, 239 |
| MvaI | CCWGG | 1 cut(s) | 239 |
| NciI | CCSGG | 1 cut(s) | 193 |
| NdeII | GATC | 1 cut(s) | 195 |
| NlaIV | GGNNCC | 1 cut(s) | 217 |
| PfeI | GAWTC | 1 cut(s) | 98 |
| PkrI | GCNGC | 2 cut(s) | 160, 251 |
| PleI | GAGTC | 1 cut(s) | 221 |
| PpsI | GAGTC | 1 cut(s) | 221 |
| PpuMI | RGGWCCY | 1 cut(s) | 216 |
| Psp5II | RGGWCCY | 1 cut(s) | 216 |
| Psp6I | CCWGG | 1 cut(s) | 237 |
| PspGI | CCWGG | 1 cut(s) | 237 |
| PspN4I | GGNNCC | 1 cut(s) | 217 |
| PspPI | GGNCC | 2 cut(s) | 216, 241 |
| PspPPI | RGGWCCY | 1 cut(s) | 216 |
| SatI | GCNGC | 2 cut(s) | 159, 250 |
| Sau3AI | GATC | 1 cut(s) | 195 |
| Sau96I | GGNCC | 2 cut(s) | 216, 241 |
| SchI | GAGTC | 1 cut(s) | 221 |
| ScrFI | CCNGG | 2 cut(s) | 193, 239 |
| SetI | ASST | 3 cut(s) | 16, 146, 212 |
| SinI | GGWCC | 1 cut(s) | 216 |
| Sse9I | AATT | 1 cut(s) | 164 |
| SsiI | CCGC | 2 cut(s) | 56, 159 |
| StyD4I | CCNGG | 2 cut(s) | 191, 237 |
| TaiI | ACGT | 1 cut(s) | 146 |
| TasI | AATT | 1 cut(s) | 164 |
| TauI | GCSGC | 1 cut(s) | 161 |
| TfiI | GAWTC | 1 cut(s) | 98 |
| TseI | GCWGC | 1 cut(s) | 249 |
| TspDTI | ATGAA | 2 cut(s) | 17, 127 |
| VpaK11BI | GGWCC | 1 cut(s) | 216 |
| XapI | RAATTY | 1 cut(s) | 164 |