Aminotransferase class-V
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr4g0390731 RchiOBHm_Chr5g0024111 |
| rosa_multiflora | Rmu_sc0004031.1_g000007 Rmu_sc0013809.1_g000011 Rmu_sc0034927.1_g000001 |
| rosa_rugosa | Rorug03G0108500 Rorug04G0346300 Rorug05G0081600 Rorug06G0311200 Rorug07G0213800 |
| rosa_samantha | Rh1DG023500 Rh1DG057300 Rh2BG158100 Rh2BG387200 Rh2BG406800 Rh2BG533000 Rh2CG336200 Rh3BG347400 Rh3CG300700 Rh4CG141500 Rh4CG158300 Rh4DG375200 Rh5BG362200 Rh6CG135300 Rh6CG212500 Rh7CG199100 Rh7DG321700 Rh7DG335400 Rh7DG393400 |
| rosa_wichuraiana | Rw4G014540 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 128 |
| AciI | CCGC | 2 cut(s) | 102, 193 |
| AcsI | RAATTY | 1 cut(s) | 107 |
| AjnI | CCWGG | 1 cut(s) | 180 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 62, 94 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 26, 58 |
| AluBI | AGCT | 2 cut(s) | 153, 202 |
| AluI | AGCT | 2 cut(s) | 153, 202 |
| AoxI | GGCC | 2 cut(s) | 3, 183 |
| ApeKI | GCWGC | 1 cut(s) | 199 |
| ApoI | RAATTY | 1 cut(s) | 107 |
| AspLEI | GCGC | 1 cut(s) | 192 |
| AspS9I | GGNCC | 2 cut(s) | 159, 184 |
| AsuHPI | GGTGA | 1 cut(s) | 76 |
| AvaII | GGWCC | 1 cut(s) | 159 |
| BbvI | GCAGC | 1 cut(s) | 211 |
| BceAI | ACGGC | 1 cut(s) | 52 |
| BciT130I | CCWGG | 1 cut(s) | 182 |
| BfoI | RGCGCY | 1 cut(s) | 193 |
| BisI | GCNGC | 3 cut(s) | 102, 193, 200 |
| BlsI | GCNGC | 3 cut(s) | 103, 194, 201 |
| Bme1390I | CCNGG | 1 cut(s) | 182 |
| Bme18I | GGWCC | 1 cut(s) | 159 |
| BmgT120I | GGNCC | 2 cut(s) | 159, 184 |
| BmiI | GGNNCC | 1 cut(s) | 160 |
| BmrFI | CCNGG | 1 cut(s) | 182 |
| BpmI | CTGGAG | 1 cut(s) | 164 |
| BpuEI | CTTGAG | 1 cut(s) | 188 |
| BseBI | CCWGG | 1 cut(s) | 182 |
| BseXI | GCAGC | 1 cut(s) | 211 |
| BseYI | CCCAGC | 1 cut(s) | 186 |
| BshFI | GGCC | 2 cut(s) | 5, 185 |
| BslFI | GGGAC | 1 cut(s) | 150 |
| BsmFI | GGGAC | 1 cut(s) | 150 |
| BsnI | GGCC | 2 cut(s) | 5, 185 |
| BspACI | CCGC | 2 cut(s) | 102, 193 |
| BspANI | GGCC | 2 cut(s) | 5, 185 |
| BspLI | GGNNCC | 1 cut(s) | 160 |
| Bst2UI | CCWGG | 1 cut(s) | 182 |
| Bst4CI | ACNGT | 1 cut(s) | 130 |
| BstC8I | GCNNGC | 1 cut(s) | 197 |
| BstH2I | RGCGCY | 1 cut(s) | 193 |
| BstHHI | GCGC | 1 cut(s) | 192 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 196 |
| BstNI | CCWGG | 1 cut(s) | 182 |
| BstSCI | CCNGG | 1 cut(s) | 180 |
| BstV1I | GCAGC | 1 cut(s) | 211 |
| BsuRI | GGCC | 2 cut(s) | 5, 185 |
| Cac8I | GCNNGC | 1 cut(s) | 197 |
| CfoI | GCGC | 1 cut(s) | 192 |
| Cfr13I | GGNCC | 2 cut(s) | 159, 184 |
| CviJI | RGCY | 5 cut(s) | 5, 67, 153, 185, 202 |
| CviKI_1 | RGCY | 5 cut(s) | 5, 67, 153, 185, 202 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 128 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 128 |
| Eco47I | GGWCC | 1 cut(s) | 159 |
| EcoO109I | RGGNCCY | 1 cut(s) | 159 |
| EcoRI | GAATTC | 1 cut(s) | 107 |
| EcoRII | CCWGG | 1 cut(s) | 180 |
| FaqI | GGGAC | 1 cut(s) | 150 |
| Fnu4HI | GCNGC | 3 cut(s) | 102, 193, 200 |
| Fsp4HI | GCNGC | 3 cut(s) | 102, 193, 200 |
| GlaI | GCGC | 1 cut(s) | 191 |
| GluI | GCNGC | 3 cut(s) | 102, 193, 200 |
| GsaI | CCCAGC | 1 cut(s) | 190 |
| GsuI | CTGGAG | 1 cut(s) | 164 |
| HaeII | RGCGCY | 1 cut(s) | 193 |
| HaeIII | GGCC | 2 cut(s) | 5, 185 |
| HhaI | GCGC | 1 cut(s) | 192 |
| Hin6I | GCGC | 1 cut(s) | 190 |
| HinP1I | GCGC | 1 cut(s) | 190 |
| HindIII | AAGCTT | 1 cut(s) | 151 |
| HinfI | GANTC | 3 cut(s) | 41, 138, 170 |
| HphI | GGTGA | 1 cut(s) | 76 |
| Hpy188I | TCNGA | 1 cut(s) | 94 |
| Hpy188III | TCNNGA | 1 cut(s) | 167 |
| Hpy99I | CGWCG | 1 cut(s) | 134 |
| HpyAV | CCTTC | 1 cut(s) | 88 |
| HpyCH4III | ACNGT | 1 cut(s) | 130 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 196 |
| HspAI | GCGC | 1 cut(s) | 190 |
| LpnPI | CCDG | 6 cut(s) | 44, 167, 175, 181, 194, 200 |
| Lsp1109I | GCAGC | 1 cut(s) | 211 |
| MluCI | AATT | 1 cut(s) | 107 |
| MlyI | GAGTC | 1 cut(s) | 164 |
| MmeI | TCCRAC | 1 cut(s) | 69 |
| MnlI | CCTC | 5 cut(s) | 16, 19, 67, 100, 188 |
| MspA1I | CMGCKG | 1 cut(s) | 195 |
| MspR9I | CCNGG | 1 cut(s) | 182 |
| MvaI | CCWGG | 1 cut(s) | 182 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 196 |
| NlaIV | GGNNCC | 1 cut(s) | 160 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 126 |
| PfeI | GAWTC | 2 cut(s) | 41, 138 |
| PflFI | GACNNNGTC | 1 cut(s) | 173 |
| PkrI | GCNGC | 3 cut(s) | 103, 194, 201 |
| PleI | GAGTC | 1 cut(s) | 164 |
| PpsI | GAGTC | 1 cut(s) | 164 |
| PpuMI | RGGWCCY | 1 cut(s) | 159 |
| Psp5II | RGGWCCY | 1 cut(s) | 159 |
| Psp6I | CCWGG | 1 cut(s) | 180 |
| PspFI | CCCAGC | 1 cut(s) | 186 |
| PspGI | CCWGG | 1 cut(s) | 180 |
| PspN4I | GGNNCC | 1 cut(s) | 160 |
| PspPI | GGNCC | 2 cut(s) | 159, 184 |
| PspPPI | RGGWCCY | 1 cut(s) | 159 |
| PsyI | GACNNNGTC | 1 cut(s) | 173 |
| SatI | GCNGC | 3 cut(s) | 102, 193, 200 |
| Sau96I | GGNCC | 2 cut(s) | 159, 184 |
| SchI | GAGTC | 1 cut(s) | 164 |
| ScrFI | CCNGG | 1 cut(s) | 182 |
| SetI | ASST | 2 cut(s) | 155, 204 |
| SinI | GGWCC | 1 cut(s) | 159 |
| SmlI | CTYRAG | 1 cut(s) | 203 |
| SmoI | CTYRAG | 1 cut(s) | 203 |
| Sse9I | AATT | 1 cut(s) | 107 |
| SsiI | CCGC | 2 cut(s) | 102, 193 |
| StyD4I | CCNGG | 1 cut(s) | 180 |
| TaaI | ACNGT | 1 cut(s) | 130 |
| TasI | AATT | 1 cut(s) | 107 |
| TauI | GCSGC | 2 cut(s) | 104, 195 |
| TfiI | GAWTC | 2 cut(s) | 41, 138 |
| TseI | GCWGC | 1 cut(s) | 199 |
| TspDTI | ATGAA | 1 cut(s) | 70 |
| TspGWI | ACGGA | 1 cut(s) | 163 |
| Tth111I | GACNNNGTC | 1 cut(s) | 173 |
| VpaK11BI | GGWCC | 1 cut(s) | 159 |
| XapI | RAATTY | 1 cut(s) | 107 |