Aminotransferase class-V
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr4g0390731 RchiOBHm_Chr5g0024111 |
| rosa_multiflora | Rmu_sc0004031.1_g000007 Rmu_sc0013809.1_g000011 Rmu_sc0034927.1_g000001 |
| rosa_rugosa | Rorug03G0108500 Rorug04G0346300 Rorug05G0081600 Rorug06G0311200 Rorug07G0213800 |
| rosa_samantha | Rh1DG023500 Rh1DG057300 Rh2BG158100 Rh2BG387200 Rh2BG406800 Rh2BG533000 Rh2CG336200 Rh3BG347400 Rh3CG300700 Rh4CG141500 Rh4CG158300 Rh4DG375200 Rh5BG362200 Rh6CG135300 Rh6CG212500 Rh7CG199100 Rh7DG321700 Rh7DG335400 Rh7DG393400 |
| rosa_wichuraiana | Rw4G014540 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 128 |
| AcsI | RAATTY | 1 cut(s) | 107 |
| AcuI | CTGAAG | 2 cut(s) | 409, 473 |
| AfaI | GTAC | 1 cut(s) | 218 |
| AgsI | TTSAA | 3 cut(s) | 229, 401, 440 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 62, 94 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 26, 58 |
| AluBI | AGCT | 2 cut(s) | 153, 202 |
| AluI | AGCT | 2 cut(s) | 153, 202 |
| Alw26I | GTCTC | 1 cut(s) | 371 |
| AoxI | GGCC | 2 cut(s) | 3, 183 |
| ApeKI | GCWGC | 2 cut(s) | 150, 199 |
| ApoI | RAATTY | 1 cut(s) | 107 |
| AseI | ATTAAT | 1 cut(s) | 251 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 369 |
| AspS9I | GGNCC | 3 cut(s) | 159, 184, 340 |
| AsuC2I | CCSGG | 1 cut(s) | 182 |
| AsuHPI | GGTGA | 1 cut(s) | 76 |
| AvaII | GGWCC | 2 cut(s) | 159, 340 |
| BbvI | GCAGC | 2 cut(s) | 162, 211 |
| BccI | CCATC | 1 cut(s) | 238 |
| BceAI | ACGGC | 2 cut(s) | 52, 163 |
| BcnI | CCSGG | 1 cut(s) | 182 |
| BcoDI | GTCTC | 1 cut(s) | 371 |
| BisI | GCNGC | 2 cut(s) | 151, 200 |
| BlsI | GCNGC | 2 cut(s) | 152, 201 |
| Bme1390I | CCNGG | 1 cut(s) | 182 |
| Bme18I | GGWCC | 2 cut(s) | 159, 340 |
| BmgT120I | GGNCC | 3 cut(s) | 159, 184, 340 |
| BmiI | GGNNCC | 1 cut(s) | 160 |
| BmrFI | CCNGG | 1 cut(s) | 182 |
| BoxI | GACNNNNGTC | 1 cut(s) | 345 |
| BpuMI | CCSGG | 1 cut(s) | 182 |
| BsaJI | CCNNGG | 1 cut(s) | 336 |
| BseDI | CCNNGG | 1 cut(s) | 336 |
| BseXI | GCAGC | 2 cut(s) | 162, 211 |
| BshFI | GGCC | 2 cut(s) | 5, 185 |
| BsiSI | CCGG | 1 cut(s) | 182 |
| BsmAI | GTCTC | 1 cut(s) | 371 |
| BsmBI | CGTCTC | 1 cut(s) | 371 |
| BsnI | GGCC | 2 cut(s) | 5, 185 |
| BspANI | GGCC | 2 cut(s) | 5, 185 |
| BspLI | GGNNCC | 1 cut(s) | 160 |
| BssECI | CCNNGG | 1 cut(s) | 336 |
| BssT1I | CCWWGG | 1 cut(s) | 336 |
| Bst4CI | ACNGT | 2 cut(s) | 130, 344 |
| BstMAI | GTCTC | 1 cut(s) | 371 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 466 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 345 |
| BstSCI | CCNGG | 1 cut(s) | 180 |
| BstV1I | GCAGC | 2 cut(s) | 162, 211 |
| BsuRI | GGCC | 2 cut(s) | 5, 185 |
| Cfr13I | GGNCC | 3 cut(s) | 159, 184, 340 |
| Csp6I | GTAC | 1 cut(s) | 217 |
| CviAII | CATG | 1 cut(s) | 257 |
| CviJI | RGCY | 5 cut(s) | 5, 67, 153, 185, 202 |
| CviKI_1 | RGCY | 5 cut(s) | 5, 67, 153, 185, 202 |
| CviQI | GTAC | 1 cut(s) | 217 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 128 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 128 |
| Eco130I | CCWWGG | 1 cut(s) | 336 |
| Eco47I | GGWCC | 2 cut(s) | 159, 340 |
| Eco57I | CTGAAG | 2 cut(s) | 409, 473 |
| EcoO109I | RGGNCCY | 1 cut(s) | 159 |
| EcoRI | GAATTC | 1 cut(s) | 107 |
| EcoT14I | CCWWGG | 1 cut(s) | 336 |
| ErhI | CCWWGG | 1 cut(s) | 336 |
| Esp3I | CGTCTC | 1 cut(s) | 371 |
| FaeI | CATG | 1 cut(s) | 260 |
| FaiI | YATR | 6 cut(s) | 258, 302, 462, 488, 512, 519 |
| FatI | CATG | 1 cut(s) | 256 |
| Fnu4HI | GCNGC | 2 cut(s) | 151, 200 |
| Fsp4HI | GCNGC | 2 cut(s) | 151, 200 |
| GluI | GCNGC | 2 cut(s) | 151, 200 |
| HaeIII | GGCC | 2 cut(s) | 5, 185 |
| HapII | CCGG | 1 cut(s) | 182 |
| Hin1II | CATG | 1 cut(s) | 260 |
| HincII | GTYRAC | 1 cut(s) | 508 |
| HindII | GTYRAC | 1 cut(s) | 508 |
| HinfI | GANTC | 5 cut(s) | 41, 138, 170, 274, 370 |
| HpaII | CCGG | 1 cut(s) | 182 |
| HphI | GGTGA | 1 cut(s) | 76 |
| Hpy166II | GTNNAC | 1 cut(s) | 508 |
| Hpy188I | TCNGA | 3 cut(s) | 94, 106, 234 |
| Hpy188III | TCNNGA | 3 cut(s) | 278, 350, 374 |
| Hpy8I | GTNNAC | 1 cut(s) | 508 |
| Hpy99I | CGWCG | 1 cut(s) | 134 |
| HpyAV | CCTTC | 1 cut(s) | 88 |
| HpyCH4III | ACNGT | 2 cut(s) | 130, 344 |
| HpyCH4V | TGCA | 1 cut(s) | 460 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 466 |
| Hsp92II | CATG | 1 cut(s) | 260 |
| LpnPI | CCDG | 9 cut(s) | 44, 175, 181, 195, 333, 359, 363, 392, 451 |
| Lsp1109I | GCAGC | 2 cut(s) | 162, 211 |
| MluCI | AATT | 3 cut(s) | 107, 252, 520 |
| MlyI | GAGTC | 1 cut(s) | 164 |
| MmeI | TCCRAC | 1 cut(s) | 69 |
| MnlI | CCTC | 8 cut(s) | 16, 19, 67, 100, 112, 188, 203, 355 |
| MroXI | GAANNNNTTC | 1 cut(s) | 369 |
| MseI | TTAA | 2 cut(s) | 251, 526 |
| MslI | CAYNNNNRTG | 1 cut(s) | 242 |
| MspI | CCGG | 1 cut(s) | 182 |
| MspR9I | CCNGG | 1 cut(s) | 182 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 466 |
| NciI | CCSGG | 1 cut(s) | 182 |
| NlaIII | CATG | 1 cut(s) | 260 |
| NlaIV | GGNNCC | 1 cut(s) | 160 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 126 |
| PdmI | GAANNNNTTC | 1 cut(s) | 369 |
| PfeI | GAWTC | 4 cut(s) | 41, 138, 274, 370 |
| PflFI | GACNNNGTC | 1 cut(s) | 173 |
| PkrI | GCNGC | 2 cut(s) | 152, 201 |
| PleI | GAGTC | 1 cut(s) | 164 |
| PpsI | GAGTC | 1 cut(s) | 164 |
| PpuMI | RGGWCCY | 1 cut(s) | 159 |
| PshAI | GACNNNNGTC | 1 cut(s) | 345 |
| PshBI | ATTAAT | 1 cut(s) | 251 |
| Psp5II | RGGWCCY | 1 cut(s) | 159 |
| PspN4I | GGNNCC | 1 cut(s) | 160 |
| PspPI | GGNCC | 3 cut(s) | 159, 184, 340 |
| PspPPI | RGGWCCY | 1 cut(s) | 159 |
| PsyI | GACNNNGTC | 1 cut(s) | 173 |
| RsaI | GTAC | 1 cut(s) | 218 |
| RsaNI | GTAC | 1 cut(s) | 217 |
| RseI | CAYNNNNRTG | 1 cut(s) | 242 |
| SaqAI | TTAA | 2 cut(s) | 251, 526 |
| SatI | GCNGC | 2 cut(s) | 151, 200 |
| Sau96I | GGNCC | 3 cut(s) | 159, 184, 340 |
| SchI | GAGTC | 1 cut(s) | 164 |
| ScrFI | CCNGG | 1 cut(s) | 182 |
| SetI | ASST | 5 cut(s) | 155, 204, 315, 479, 503 |
| SinI | GGWCC | 2 cut(s) | 159, 340 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 242 |
| Sse9I | AATT | 3 cut(s) | 107, 252, 520 |
| StyD4I | CCNGG | 1 cut(s) | 180 |
| StyI | CCWWGG | 1 cut(s) | 336 |
| TaaI | ACNGT | 2 cut(s) | 130, 344 |
| TasI | AATT | 3 cut(s) | 107, 252, 520 |
| TatI | WGTACW | 1 cut(s) | 216 |
| TfiI | GAWTC | 4 cut(s) | 41, 138, 274, 370 |
| Tru1I | TTAA | 2 cut(s) | 251, 526 |
| Tru9I | TTAA | 2 cut(s) | 251, 526 |
| TseI | GCWGC | 2 cut(s) | 150, 199 |
| TspDTI | ATGAA | 9 cut(s) | 70, 225, 245, 317, 369, 377, 423, 429, 434 |
| TspGWI | ACGGA | 1 cut(s) | 163 |
| Tth111I | GACNNNGTC | 1 cut(s) | 173 |
| VpaK11BI | GGWCC | 2 cut(s) | 159, 340 |
| VspI | ATTAAT | 1 cut(s) | 251 |
| XapI | RAATTY | 1 cut(s) | 107 |
| XmnI | GAANNNNTTC | 1 cut(s) | 369 |