CCR4-NOT transcription complex subunit
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr4g0390731 RchiOBHm_Chr5g0024111 |
| rosa_multiflora | Rmu_sc0004031.1_g000007 Rmu_sc0013809.1_g000011 Rmu_sc0034927.1_g000001 |
| rosa_rugosa | Rorug03G0108500 Rorug04G0346300 Rorug05G0081600 Rorug06G0311200 Rorug07G0213800 |
| rosa_samantha | Rh1DG023500 Rh1DG057300 Rh2BG158100 Rh2BG387200 Rh2BG406800 Rh2BG533000 Rh2CG336200 Rh3BG347400 Rh3CG300700 Rh4CG141500 Rh4CG158300 Rh4DG375200 Rh5BG362200 Rh6CG135300 Rh6CG212500 Rh7CG199100 Rh7DG321700 Rh7DG335400 Rh7DG393400 |
| rosa_wichuraiana | Rw4G014540 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 147 |
| AcuI | CTGAAG | 1 cut(s) | 19 |
| AjnI | CCWGG | 2 cut(s) | 87, 216 |
| AluBI | AGCT | 3 cut(s) | 33, 53, 191 |
| AluI | AGCT | 3 cut(s) | 33, 53, 191 |
| AoxI | GGCC | 3 cut(s) | 144, 168, 297 |
| AspLEI | GCGC | 2 cut(s) | 28, 278 |
| AsuHPI | GGTGA | 2 cut(s) | 70, 113 |
| BciT130I | CCWGG | 2 cut(s) | 89, 218 |
| BfaI | CTAG | 1 cut(s) | 72 |
| BfoI | RGCGCY | 1 cut(s) | 29 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 152 |
| BisI | GCNGC | 1 cut(s) | 147 |
| BlpI | GCTNAGC | 1 cut(s) | 29 |
| BlsI | GCNGC | 1 cut(s) | 148 |
| Bme1390I | CCNGG | 2 cut(s) | 89, 218 |
| BmrFI | CCNGG | 2 cut(s) | 89, 218 |
| BmsI | GCATC | 2 cut(s) | 58, 287 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 29 |
| BsaJI | CCNNGG | 4 cut(s) | 88, 150, 216, 227 |
| Bse1I | ACTGG | 1 cut(s) | 209 |
| BseBI | CCWGG | 2 cut(s) | 89, 218 |
| BseDI | CCNNGG | 4 cut(s) | 88, 150, 216, 227 |
| BseMII | CTCAG | 2 cut(s) | 136, 231 |
| BseNI | ACTGG | 1 cut(s) | 209 |
| BshFI | GGCC | 3 cut(s) | 146, 170, 299 |
| BslFI | GGGAC | 1 cut(s) | 198 |
| BsmFI | GGGAC | 1 cut(s) | 198 |
| BsnI | GGCC | 3 cut(s) | 146, 170, 299 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 29 |
| Bsp19I | CCATGG | 1 cut(s) | 227 |
| BspACI | CCGC | 1 cut(s) | 147 |
| BspANI | GGCC | 3 cut(s) | 146, 170, 299 |
| BspCNI | CTCAG | 2 cut(s) | 135, 232 |
| BsrI | ACTGG | 1 cut(s) | 209 |
| BssECI | CCNNGG | 4 cut(s) | 88, 150, 216, 227 |
| BssT1I | CCWWGG | 2 cut(s) | 150, 227 |
| Bst2UI | CCWGG | 2 cut(s) | 89, 218 |
| Bst4CI | ACNGT | 1 cut(s) | 212 |
| BstDEI | CTNAG | 3 cut(s) | 29, 122, 240 |
| BstDSI | CCRYGG | 1 cut(s) | 227 |
| BstH2I | RGCGCY | 1 cut(s) | 29 |
| BstHHI | GCGC | 2 cut(s) | 28, 278 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 152, 167, 296 |
| BstNI | CCWGG | 2 cut(s) | 89, 218 |
| BstSCI | CCNGG | 2 cut(s) | 87, 216 |
| BsuRI | GGCC | 3 cut(s) | 146, 170, 299 |
| BtgI | CCRYGG | 1 cut(s) | 227 |
| CfoI | GCGC | 2 cut(s) | 28, 278 |
| CviAII | CATG | 1 cut(s) | 228 |
| DdeI | CTNAG | 3 cut(s) | 29, 122, 240 |
| Eco130I | CCWWGG | 2 cut(s) | 150, 227 |
| Eco57I | CTGAAG | 1 cut(s) | 19 |
| EcoRII | CCWGG | 2 cut(s) | 87, 216 |
| EcoT14I | CCWWGG | 2 cut(s) | 150, 227 |
| ErhI | CCWWGG | 2 cut(s) | 150, 227 |
| FaeI | CATG | 1 cut(s) | 231 |
| FaiI | YATR | 7 cut(s) | 8, 20, 119, 183, 229, 255, 288 |
| FaqI | GGGAC | 1 cut(s) | 198 |
| FatI | CATG | 1 cut(s) | 227 |
| Fnu4HI | GCNGC | 1 cut(s) | 147 |
| Fsp4HI | GCNGC | 1 cut(s) | 147 |
| FspBI | CTAG | 1 cut(s) | 72 |
| GlaI | GCGC | 2 cut(s) | 27, 277 |
| GluI | GCNGC | 1 cut(s) | 147 |
| HaeII | RGCGCY | 1 cut(s) | 29 |
| HaeIII | GGCC | 3 cut(s) | 146, 170, 299 |
| HhaI | GCGC | 2 cut(s) | 28, 278 |
| Hin1II | CATG | 1 cut(s) | 231 |
| Hin6I | GCGC | 2 cut(s) | 26, 276 |
| HinP1I | GCGC | 2 cut(s) | 26, 276 |
| HinfI | GANTC | 3 cut(s) | 14, 77, 93 |
| HphI | GGTGA | 2 cut(s) | 70, 113 |
| Hpy188I | TCNGA | 2 cut(s) | 82, 125 |
| Hpy188III | TCNNGA | 1 cut(s) | 137 |
| HpyCH4III | ACNGT | 1 cut(s) | 212 |
| HpyCH4V | TGCA | 1 cut(s) | 290 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 152, 167, 296 |
| HpyF3I | CTNAG | 3 cut(s) | 29, 122, 240 |
| Hsp92II | CATG | 1 cut(s) | 231 |
| HspAI | GCGC | 2 cut(s) | 26, 276 |
| LpnPI | CCDG | 8 cut(s) | 41, 74, 101, 123, 190, 203, 230, 281 |
| LweI | GCATC | 2 cut(s) | 58, 287 |
| MaeI | CTAG | 1 cut(s) | 72 |
| MaeIII | GTNAC | 2 cut(s) | 38, 58 |
| MluCI | AATT | 2 cut(s) | 178, 282 |
| MlyI | GAGTC | 2 cut(s) | 23, 102 |
| MmeI | TCCRAC | 1 cut(s) | 27 |
| MnlI | CCTC | 1 cut(s) | 136 |
| MspR9I | CCNGG | 2 cut(s) | 89, 218 |
| MvaI | CCWGG | 2 cut(s) | 89, 218 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 152, 167, 296 |
| NcoI | CCATGG | 1 cut(s) | 227 |
| NlaIII | CATG | 1 cut(s) | 231 |
| NmuCI | GTSAC | 1 cut(s) | 58 |
| PfeI | GAWTC | 1 cut(s) | 77 |
| PkrI | GCNGC | 1 cut(s) | 148 |
| PleI | GAGTC | 2 cut(s) | 22, 101 |
| PpsI | GAGTC | 2 cut(s) | 22, 101 |
| Psp6I | CCWGG | 2 cut(s) | 87, 216 |
| PspGI | CCWGG | 2 cut(s) | 87, 216 |
| SatI | GCNGC | 1 cut(s) | 147 |
| SchI | GAGTC | 2 cut(s) | 23, 102 |
| ScrFI | CCNGG | 2 cut(s) | 89, 218 |
| SetI | ASST | 3 cut(s) | 35, 55, 193 |
| SfaNI | GCATC | 2 cut(s) | 58, 287 |
| Sse9I | AATT | 2 cut(s) | 178, 282 |
| SsiI | CCGC | 1 cut(s) | 147 |
| SspMI | CTAG | 1 cut(s) | 72 |
| StyD4I | CCNGG | 2 cut(s) | 87, 216 |
| StyI | CCWWGG | 2 cut(s) | 150, 227 |
| TaaI | ACNGT | 1 cut(s) | 212 |
| TaqI | TCGA | 1 cut(s) | 136 |
| TasI | AATT | 2 cut(s) | 178, 282 |
| TauI | GCSGC | 1 cut(s) | 149 |
| TfiI | GAWTC | 1 cut(s) | 77 |
| TseFI | GTSAC | 1 cut(s) | 58 |
| Tsp45I | GTSAC | 1 cut(s) | 58 |
| TspDTI | ATGAA | 1 cut(s) | 198 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 95 |
| XspI | CTAG | 1 cut(s) | 72 |