RchiOBHm_Chr6g0279101

Pentatricopeptide repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
6
OG0003199
Physical Location & Seq
Reverse (-)
42267976 .. 42270056
2081 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ25034

Sequence Viewer

Length: 2019 bp
ATGATGATTCTGGGTAATGCAAATGGTTTCATATATAAACTCATGCCCCGAGCTCGTATTATTCTTCATCTACTCACCATCCCATTACCCAATCACGCATCCCCACAGCACTCTTGTTTTGCCTCAACTTCAAAACCCAGTAGTCATGCCAAAGACGTAGACCTTTTTTCACTGAACAGAAGGATCTCCCATTTGGTCCGAACTGGTCAGATAGAGCAAGCCAGGGAAGCCTTTGACAAGATGAAGCAACGGAATATCGTTACTTGGAATTCAATGATAACCGGGTATGTGAAACGCCGAGAGATGGCCAAGGCCCGGATGCTGTTCGACGAAATGCCTGACAGAGATGTTGTGTCCTGGAATTTGATGATATCCGGGTACGTTTCGTGCCGCGGAAGTCGTCGGTATGTTGAGGAGGGGAGGACTTTGTTTGATCAGATGCCGGTGAGGGACTGTGTTTCTTGGAACACAATGATCAGTGGGTACGCCAAGAATGGGAGGATGGGGGAGGCATTGCGGCTTTTCGATACCATGCCGCAGAGGAGTGTTGTTTCTTGGAATGCAATGGTTACCGGGTTTCTACAGAATGGCCATGTTGCGCGTGCTATTGAGTTTTTCGAGAGAATGCCGCAGAGGGATGGGGCTTCTCTTAGTGCACTCGTGTCGGGGCTTATTCAGAATGGTGAGCTGGATGAAGCTGCGAGGATTGTTGGCGAATGTGGGAAGAGGGATGAGGAGGGTGTGGAAGATTTGGTGGATGCTTATAATACGTTGGTTGCTGGTTATGGTCAGAGAGGAAGGGTTGAAGAGGCTCGGCGCCTTTTTGATCAAATACCATTTCGTCGTGAGAAGGGGAATGAGGACAGTGGGAGGTTTGAGAGAAATGTTGTATCGTGGAATTCTATGATTATGTGCTATGTGAAAACAGGAGATATTGTTTCTGCTAGAGAACTTTTTAACCAAATGATAGAACAAGATACCTTTTCGTGGAATACCATGATCAGCGGCTATGTTCATATGTCAGATATGGAAGAGGCTGCCAATCTCTTTCGTAGAATGCCAAATCCTGATACACTGTCATGGAATGCAATGATCTTAGGGTATGCCCAGGTTGGGCGTTTAAAACTGGCTCATGATTTTTTTGAGAGGATGCCGCACAAGAGTCTAATATCTTGGAACTCCATGATATCAGGGTATGAGAAAAATGAGGACTTTATGGGTGGAGTTAAGCTTTTCTCTCAGATGCAACTAGAAGGAGAGAAACCTGATAGACACACTTTATCATCAGTTCTTAGTGTGAGTACTGGGTTAGCGGATCTGCATCTAGGCATGCAGATTCATCAGCTGGTCATGAAGACAGTTATTGCAGATTTGCCAATAAACAACTCTCTTATAACTATGTATTCACGATGTGGTGCTATCAAAGAGGCAGAAACAATTTTTGATGAGATGAAACAGCAGAAAGATGTGATCTCCTGGAATGCAATGATTGGGGGCTATGCATCTCATGGTTTTGCTGCAGAGGCTTTAGGACTTTTTTGTTTGATGAAGAGGTCAAAGGTGCAACCTACATATATAACATTTATTGCAGTTTTAAATGCATGTGCTCATGCAGGATTAGTTGAAGAAGGCCGGAGTCAATTTAAATCCATGATTAGTGAATTTGGCATTGAGCCACGTATCGAACACTATGCCTCCCTTGTCGACATCATTGGTCGGCATGGGCAGCTTGAGGAGGCTCACGATTTGATCAATAGTATGCCATTTGAACCTGATAAGGCTGTGTGGGGAGCATTATTAGGTGCTTGTAGAGTGCATAACAATGTAGAGTTGGCAAAAGTTGCAGCTGAAGCATTAACAAGACTTGAACCTGAAAGCTCAGGTCCGTATGTATTGTTGTACAATATGTATGCTGATGCCGGACTATGGGATGAAGCAGCAGCTGTGAGATCGCTGATGGATGAAAACAAGATAACAAAGCATGCTGCCTATAGTAGGGTAAATTCTTCGCATTGCTGA

Protein Analysis

672

Amino Acids

75.8

Weight (kDa)

6.39

Isoelectric Point (pI)

44.53

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 84 - 116 1.7e-08 PPR repeat family
PPR PF01535 87 - 116 1.5e-07 PPR repeat
PPR_1 PF12854 150 - 178 8.5e-09 PPR repeat
PPR_2 PF13041 151 - 183 9.9e-09 PPR repeat family
PPR PF01535 153 - 181 1.4e-09 PPR repeat
PPR_2 PF13041 294 - 324 1.7e-06 PPR repeat family
PPR PF01535 297 - 324 1.5e-07 PPR repeat
PPR PF01535 328 - 353 1.5e-06 PPR repeat
PPR_2 PF13041 389 - 431 8.6e-08 PPR repeat family
PPR_2 PF13041 488 - 537 7.4e-10 PPR repeat family
PPR PF01535 491 - 520 4.7e-07 PPR repeat
E_motif PF20431 606 - 665 5.6e-13 E motif
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 765, 1394
AccB1I GGYRCC 1 cut(s) 816
AccI GTMKAC 2 cut(s) 159, 1704
AccII CGCG 2 cut(s) 393, 601
AciI CCGC 8 cut(s) 391, 393, 517, 536, 629, 1005, 1154, 1313
AclWI GGATC 2 cut(s) 191, 1323
AcoI YGGCCR 2 cut(s) 306, 589
AcsI RAATTY 5 cut(s) 268, 361, 898, 1661, 2002
AcuI CTGAAG 1 cut(s) 1869
AcyI GRCGYC 1 cut(s) 817
AdeI CACNNNGTG 1 cut(s) 1412
AfaI GTAC 4 cut(s) 380, 485, 1303, 1901
AfiI CCNNNNNNNGG 7 cut(s) 304, 315, 495, 987, 1113, 1926, 1995
AgsI TTSAA 6 cut(s) 132, 273, 806, 1625, 1769, 1868
AjnI CCWGG 4 cut(s) 221, 356, 1107, 1475
AluBI AGCT 9 cut(s) 53, 688, 698, 1231, 1345, 1729, 1847, 1878, 1943
AluI AGCT 9 cut(s) 53, 688, 698, 1231, 1345, 1729, 1847, 1878, 1943
Alw21I GWGCWC 3 cut(s) 55, 658, 1609
Alw44I GTGCAC 1 cut(s) 654
AlwI GGATC 2 cut(s) 191, 1323
AlwNI CAGNNNCTG 1 cut(s) 1943
Ama87I CYCGRG 1 cut(s) 48
AoxI GGCC 4 cut(s) 306, 312, 589, 1630
ApaLI GTGCAC 1 cut(s) 654
ApeKI GCWGC 8 cut(s) 698, 1037, 1517, 1726, 1844, 1937, 1940, 1985
ApoI RAATTY 5 cut(s) 268, 361, 898, 1661, 2002
AspLEI GCGC 2 cut(s) 601, 819
AspS9I GGNCC 3 cut(s) 196, 313, 1883
AsuC2I CCSGG 4 cut(s) 283, 316, 376, 574
AsuHPI GGTGA 3 cut(s) 67, 457, 695
AvaI CYCGRG 1 cut(s) 48
AvaII GGWCC 2 cut(s) 196, 1883
BaeGI GKGCMC 1 cut(s) 658
BalI TGGCCA 2 cut(s) 308, 591
BanI GGYRCC 1 cut(s) 816
BanII GRGCYC 1 cut(s) 55
BauI CACGAG 1 cut(s) 659
BbsI GAAGAC 1 cut(s) 1361
Bbv12I GWGCWC 3 cut(s) 55, 658, 1609
BbvI GCAGC 8 cut(s) 685, 1024, 1504, 1738, 1856, 1949, 1952, 1972
BccI CCATC 5 cut(s) 86, 298, 496, 632, 1951
BcgI CGANNNNNNTGC 4 cut(s) 645, 679, 1673, 1707
BciT130I CCWGG 4 cut(s) 223, 358, 1109, 1477
BclI TGATCA 5 cut(s) 433, 474, 826, 999, 1749
BcnI CCSGG 4 cut(s) 283, 316, 376, 574
BfaI CTAG 3 cut(s) 945, 1250, 1325
BfmI CTRYAG 3 cut(s) 581, 1518, 1990
BfoI RGCGCY 1 cut(s) 820
BmcAI AGTACT 1 cut(s) 1303
Bme1390I CCNGG 8 cut(s) 223, 283, 316, 358, 376, 574, 1109, 1477
Bme18I GGWCC 2 cut(s) 196, 1883
BmeT110I CYCGRG 1 cut(s) 48
BmgT120I GGNCC 3 cut(s) 196, 313, 1883
BmiI GGNNCC 1 cut(s) 818
BmrFI CCNGG 8 cut(s) 223, 283, 316, 358, 376, 574, 1109, 1477
BmrI ACTGGG 2 cut(s) 132, 1314
BmsI GCATC 9 cut(s) 107, 309, 429, 748, 1140, 1233, 1330, 1511, 1906
BmuI ACTGGG 2 cut(s) 132, 1314
BpiI GAAGAC 1 cut(s) 1361
Bpu10I CCTNAGC 1 cut(s) 1879
BpuEI CTTGAG 1 cut(s) 1751
BpuMI CCSGG 4 cut(s) 283, 316, 376, 574
BsaAI YACGTR 1 cut(s) 1679
BsaBI GATNNNNATC 1 cut(s) 1320
BsaHI GRCGYC 1 cut(s) 817
BsaJI CCNNGG 4 cut(s) 222, 309, 391, 1107
BsaXI ACNNNNNCTCC 4 cut(s) 921, 951, 1679, 1709
Bsc4I CCNNNNNNNGG 7 cut(s) 304, 315, 495, 987, 1113, 1926, 1995
Bse118I RCCGGY 1 cut(s) 442
Bse1I ACTGG 4 cut(s) 138, 208, 1131, 1309
Bse3DI GCAATG 5 cut(s) 512, 570, 1095, 1491, 2011
Bse8I GATNNNNATC 1 cut(s) 1320
BseBI CCWGG 4 cut(s) 223, 358, 1109, 1477
BseDI CCNNGG 4 cut(s) 222, 309, 391, 1107
BseJI GATNNNNATC 1 cut(s) 1320
BseLI CCNNNNNNNGG 7 cut(s) 304, 315, 495, 987, 1113, 1926, 1995
BseMI GCAATG 5 cut(s) 512, 570, 1095, 1491, 2011
BseMII CTCAG 2 cut(s) 1253, 1893
BseNI ACTGG 4 cut(s) 138, 208, 1131, 1309
BseRI GAGGAG 4 cut(s) 428, 556, 749, 1748
BseSI GKGCMC 1 cut(s) 658
BseXI GCAGC 8 cut(s) 685, 1024, 1504, 1738, 1856, 1949, 1952, 1972
Bsh1236I CGCG 2 cut(s) 393, 601
BshFI GGCC 4 cut(s) 308, 314, 591, 1632
BshNI GGYRCC 1 cut(s) 816
BsiHKAI GWGCWC 3 cut(s) 55, 658, 1609
BsiHKCI CYCGRG 1 cut(s) 48
BsiSI CCGG 7 cut(s) 282, 316, 375, 443, 573, 1633, 1920
BslFI GGGAC 1 cut(s) 464
BslI CCNNNNNNNGG 7 cut(s) 304, 315, 495, 987, 1113, 1926, 1995
BsmFI GGGAC 1 cut(s) 464
BsmI GAATGC 5 cut(s) 565, 630, 1062, 1090, 1486
BsnI GGCC 4 cut(s) 308, 314, 591, 1632
BsoBI CYCGRG 1 cut(s) 48
Bsp1286I GDGCHC 3 cut(s) 55, 658, 1609
Bsp1407I TGTACA 1 cut(s) 1899
BspACI CCGC 8 cut(s) 391, 393, 517, 536, 629, 1005, 1154, 1313
BspANI GGCC 4 cut(s) 308, 314, 591, 1632
BspCNI CTCAG 2 cut(s) 1252, 1892
BspFNI CGCG 2 cut(s) 393, 601
BspHI TCATGA 2 cut(s) 1132, 1350
BspLI GGNNCC 1 cut(s) 818
BspMAI CTGCAG 1 cut(s) 1522
BspPI GGATC 2 cut(s) 191, 1323
BspT107I GGYRCC 1 cut(s) 816
BsrDI GCAATG 5 cut(s) 512, 570, 1095, 1491, 2011
BsrFI RCCGGY 1 cut(s) 442
BsrGI TGTACA 1 cut(s) 1899
BsrI ACTGG 4 cut(s) 138, 208, 1131, 1309
BssAI RCCGGY 1 cut(s) 442
BssECI CCNNGG 4 cut(s) 222, 309, 391, 1107
BssNI GRCGYC 1 cut(s) 817
BssSI CACGAG 1 cut(s) 659
BssT1I CCWWGG 1 cut(s) 309
Bst2BI CACGAG 1 cut(s) 659
Bst2UI CCWGG 4 cut(s) 223, 358, 1109, 1477
Bst4CI ACNGT 4 cut(s) 455, 866, 1077, 1360
Bst6I CTCTTC 4 cut(s) 719, 801, 1026, 1544
BstACI GRCGYC 1 cut(s) 817
BstAPI GCANNNNNTGC 1 cut(s) 1841
BstAUI TGTACA 1 cut(s) 1899
BstBAI YACGTR 1 cut(s) 1679
BstC8I GCNNGC 4 cut(s) 219, 603, 1331, 1983
BstDEI CTNAG 5 cut(s) 650, 1096, 1239, 1292, 1879
BstDSI CCRYGG 1 cut(s) 391
BstEII GGTNACC 1 cut(s) 568
BstENI CCTNNNNNAGG 1 cut(s) 1993
BstFNI CGCG 2 cut(s) 393, 601
BstH2I RGCGCY 1 cut(s) 820
BstHHI GCGC 2 cut(s) 601, 819
BstMWI GCNNNNNNNGC 5 cut(s) 227, 1523, 1726, 1841, 1850
BstNI CCWGG 4 cut(s) 223, 358, 1109, 1477
BstNSI RCATGY 3 cut(s) 1333, 1605, 1985
BstPI GGTNACC 1 cut(s) 568
BstSCI CCNGG 8 cut(s) 221, 281, 314, 356, 374, 572, 1107, 1475
BstSFI CTRYAG 3 cut(s) 581, 1518, 1990
BstSLI GKGCMC 1 cut(s) 658
BstUI CGCG 2 cut(s) 393, 601
BstV1I GCAGC 8 cut(s) 685, 1024, 1504, 1738, 1856, 1949, 1952, 1972
BstV2I GAAGAC 1 cut(s) 1361
BstX2I RGATCY 2 cut(s) 183, 1315
BstYI RGATCY 2 cut(s) 183, 1315
BsuRI GGCC 4 cut(s) 308, 314, 591, 1632
BtgI CCRYGG 1 cut(s) 391
BtsIMutI CAGTG 4 cut(s) 170, 484, 871, 1073
Cac8I GCNNGC 4 cut(s) 219, 603, 1331, 1983
CaiI CAGNNNCTG 1 cut(s) 1943
CciI TCATGA 2 cut(s) 1132, 1350
CfoI GCGC 2 cut(s) 601, 819
Cfr10I RCCGGY 1 cut(s) 442
Cfr13I GGNCC 3 cut(s) 196, 313, 1883
Cfr42I CCGCGG 1 cut(s) 394
Csp6I GTAC 4 cut(s) 379, 484, 1302, 1900
CviQI GTAC 4 cut(s) 379, 484, 1302, 1900
DdeI CTNAG 5 cut(s) 650, 1096, 1239, 1292, 1879
DinI GGCGCC 1 cut(s) 818
DraI TTTAAA 3 cut(s) 1122, 1596, 1645
DraIII CACNNNGTG 1 cut(s) 1412
EaeI YGGCCR 2 cut(s) 306, 589
Eam1104I CTCTTC 4 cut(s) 719, 801, 1026, 1544
EarI CTCTTC 4 cut(s) 719, 801, 1026, 1544
Ecl136II GAGCTC 1 cut(s) 53
Eco130I CCWWGG 1 cut(s) 309
Eco24I GRGCYC 1 cut(s) 55
Eco32I GATATC 2 cut(s) 372, 1188
Eco47I GGWCC 2 cut(s) 196, 1883
Eco53kI GAGCTC 1 cut(s) 53
Eco57I CTGAAG 1 cut(s) 1869
Eco88I CYCGRG 1 cut(s) 48
Eco91I GGTNACC 1 cut(s) 568
EcoICRI GAGCTC 1 cut(s) 53
EcoNI CCTNNNNNAGG 1 cut(s) 1993
EcoO65I GGTNACC 1 cut(s) 568
EcoRI GAATTC 2 cut(s) 268, 898
EcoRII CCWGG 4 cut(s) 221, 356, 1107, 1475
EcoRV GATATC 2 cut(s) 372, 1188
EcoT14I CCWWGG 1 cut(s) 309
EcoT22I ATGCAT 2 cut(s) 1504, 1603
EcoT38I GRGCYC 1 cut(s) 55
EgeI GGCGCC 1 cut(s) 818
EheI GGCGCC 1 cut(s) 818
ErhI CCWWGG 1 cut(s) 309
FaqI GGGAC 1 cut(s) 464
FauNDI CATATG 1 cut(s) 1017
FbaI TGATCA 5 cut(s) 433, 474, 826, 999, 1749
FblI GTMKAC 2 cut(s) 159, 1704
FriOI GRGCYC 1 cut(s) 55
FspBI CTAG 3 cut(s) 945, 1250, 1325
GlaI GCGC 2 cut(s) 600, 818
HaeII RGCGCY 1 cut(s) 820
HaeIII GGCC 4 cut(s) 308, 314, 591, 1632
HapII CCGG 7 cut(s) 282, 316, 375, 443, 573, 1633, 1920
HhaI GCGC 2 cut(s) 601, 819
Hin1I GRCGYC 1 cut(s) 817
Hin6I GCGC 2 cut(s) 599, 817
HinP1I GCGC 2 cut(s) 599, 817
HincII GTYRAC 1 cut(s) 1705
HindII GTYRAC 1 cut(s) 1705
HindIII AAGCTT 1 cut(s) 1229
HinfI GANTC 4 cut(s) 7, 1162, 1336, 1636
HpaII CCGG 7 cut(s) 282, 316, 375, 443, 573, 1633, 1920
HphI GGTGA 3 cut(s) 67, 457, 695
Hpy166II GTNNAC 3 cut(s) 160, 656, 1705
Hpy188I TCNGA 7 cut(s) 200, 210, 438, 678, 792, 1024, 1242
Hpy188III TCNNGA 7 cut(s) 619, 845, 1067, 1133, 1351, 1407, 1742
Hpy8I GTNNAC 3 cut(s) 160, 656, 1705
Hpy99I CGWCG 3 cut(s) 332, 405, 846
HpyAV CCTTC 5 cut(s) 174, 792, 844, 1247, 1622
HpyCH4III ACNGT 4 cut(s) 455, 866, 1077, 1360
HpyCH4IV ACGT 4 cut(s) 156, 381, 770, 1678
HpyF10VI GCNNNNNNNGC 5 cut(s) 227, 1523, 1726, 1841, 1850
HpyF3I CTNAG 5 cut(s) 650, 1096, 1239, 1292, 1879
HpySE526I ACGT 4 cut(s) 156, 381, 770, 1678
Hsp92I GRCGYC 1 cut(s) 817
HspAI GCGC 2 cut(s) 599, 817
KasI GGCGCC 1 cut(s) 816
Ksp22I TGATCA 5 cut(s) 433, 474, 826, 999, 1749
KspI CCGCGG 1 cut(s) 394
LmnI GCTCC 1 cut(s) 1790
Lsp1109I GCAGC 8 cut(s) 685, 1024, 1504, 1738, 1856, 1949, 1952, 1972
LweI GCATC 9 cut(s) 107, 309, 429, 748, 1140, 1233, 1330, 1511, 1906
MaeI CTAG 3 cut(s) 945, 1250, 1325
MaeII ACGT 4 cut(s) 156, 381, 770, 1678
MaeIII GTNAC 2 cut(s) 259, 568
MboII GAAGA 9 cut(s) 56, 736, 758, 818, 1043, 1366, 1561, 1637, 1998
MflI RGATCY 2 cut(s) 183, 1315
MhlI GDGCHC 3 cut(s) 55, 658, 1609
MlsI TGGCCA 2 cut(s) 308, 591
MluCI AATT 7 cut(s) 268, 361, 898, 1437, 1640, 1661, 2002
MluNI TGGCCA 2 cut(s) 308, 591
Mly113I GGCGCC 1 cut(s) 817
MlyI GAGTC 2 cut(s) 1171, 1645
Mox20I TGGCCA 2 cut(s) 308, 591
Mph1103I ATGCAT 2 cut(s) 1504, 1603
MscI TGGCCA 2 cut(s) 308, 591
MseI TTAA 6 cut(s) 957, 1121, 1227, 1595, 1644, 1856
MslI CAYNNNNRTG 2 cut(s) 1078, 1821
Msp20I TGGCCA 2 cut(s) 308, 591
MspA1I CMGCKG 5 cut(s) 393, 1005, 1345, 1847, 1943
MspI CCGG 7 cut(s) 282, 316, 375, 443, 573, 1633, 1920
MspR9I CCNGG 8 cut(s) 223, 283, 316, 358, 376, 574, 1109, 1477
Mva1269I GAATGC 5 cut(s) 565, 630, 1062, 1090, 1486
MvaI CCWGG 4 cut(s) 223, 358, 1109, 1477
MvnI CGCG 2 cut(s) 393, 601
MwoI GCNNNNNNNGC 5 cut(s) 227, 1523, 1726, 1841, 1850
NarI GGCGCC 1 cut(s) 817
NciI CCSGG 4 cut(s) 283, 316, 376, 574
NdeI CATATG 1 cut(s) 1017
NlaIV GGNNCC 1 cut(s) 818
NmeAIII GCCGAG 2 cut(s) 323, 793
NsiI ATGCAT 2 cut(s) 1504, 1603
NspI RCATGY 3 cut(s) 1333, 1605, 1985
PaeI GCATGC 2 cut(s) 1333, 1985
PagI TCATGA 2 cut(s) 1132, 1350
PctI GAATGC 5 cut(s) 565, 630, 1062, 1090, 1486
PfeI GAWTC 2 cut(s) 7, 1336
PfoI TCCNGGA 2 cut(s) 356, 1475
PleI GAGTC 2 cut(s) 1170, 1644
PluTI GGCGCC 1 cut(s) 820
PpsI GAGTC 2 cut(s) 1170, 1644
Ppu21I YACGTR 1 cut(s) 1679
PsiI TTATAA 2 cut(s) 765, 1394
Psp124BI GAGCTC 1 cut(s) 55
Psp6I CCWGG 4 cut(s) 221, 356, 1107, 1475
PspEI GGTNACC 1 cut(s) 568
PspGI CCWGG 4 cut(s) 221, 356, 1107, 1475
PspN4I GGNNCC 1 cut(s) 818
PspPI GGNCC 3 cut(s) 196, 313, 1883
PstI CTGCAG 1 cut(s) 1522
PstNI CAGNNNCTG 1 cut(s) 1943
PsuI RGATCY 2 cut(s) 183, 1315
PvuII CAGCTG 3 cut(s) 1345, 1847, 1943
RsaI GTAC 4 cut(s) 380, 485, 1303, 1901
RsaNI GTAC 4 cut(s) 379, 484, 1302, 1900
RseI CAYNNNNRTG 2 cut(s) 1078, 1821
SacI GAGCTC 1 cut(s) 55
SacII CCGCGG 1 cut(s) 394
SalI GTCGAC 1 cut(s) 1703
SaqAI TTAA 6 cut(s) 957, 1121, 1227, 1595, 1644, 1856
Sau96I GGNCC 3 cut(s) 196, 313, 1883
ScaI AGTACT 1 cut(s) 1303
SchI GAGTC 2 cut(s) 1171, 1645
ScrFI CCNGG 8 cut(s) 223, 283, 316, 358, 376, 574, 1109, 1477
SduI GDGCHC 3 cut(s) 55, 658, 1609
SfaNI GCATC 9 cut(s) 107, 309, 429, 748, 1140, 1233, 1330, 1511, 1906
SfcI CTRYAG 3 cut(s) 581, 1518, 1990
SfoI GGCGCC 1 cut(s) 818
Sfr303I CCGCGG 1 cut(s) 394
SgrBI CCGCGG 1 cut(s) 394
SinI GGWCC 2 cut(s) 196, 1883
SmiI ATTTAAAT 1 cut(s) 1645
SmiMI CAYNNNNRTG 2 cut(s) 1078, 1821
SmlI CTYRAG 1 cut(s) 1730
SmoI CTYRAG 1 cut(s) 1730
SphI GCATGC 2 cut(s) 1333, 1985
Sse9I AATT 7 cut(s) 268, 361, 898, 1437, 1640, 1661, 2002
SsiI CCGC 8 cut(s) 391, 393, 517, 536, 629, 1005, 1154, 1313
SspDI GGCGCC 1 cut(s) 816
SspMI CTAG 3 cut(s) 945, 1250, 1325
SstI GAGCTC 1 cut(s) 55
StyD4I CCNGG 8 cut(s) 221, 281, 314, 356, 374, 572, 1107, 1475
StyI CCWWGG 1 cut(s) 309
SwaI ATTTAAAT 1 cut(s) 1645
TaaI ACNGT 4 cut(s) 455, 866, 1077, 1360
TaiI ACGT 4 cut(s) 159, 384, 773, 1681
TaqI TCGA 5 cut(s) 327, 525, 618, 1683, 1704
TasI AATT 7 cut(s) 268, 361, 898, 1437, 1640, 1661, 2002
TatI WGTACW 2 cut(s) 1301, 1899
TauI GCSGC 6 cut(s) 393, 520, 538, 631, 1008, 1156
TfiI GAWTC 2 cut(s) 7, 1336
Tru1I TTAA 6 cut(s) 957, 1121, 1227, 1595, 1644, 1856
Tru9I TTAA 6 cut(s) 957, 1121, 1227, 1595, 1644, 1856
TscAI CASTG 4 cut(s) 177, 484, 871, 1080
TseI GCWGC 8 cut(s) 698, 1037, 1517, 1726, 1844, 1937, 1940, 1985
TspGWI ACGGA 2 cut(s) 265, 1875
TspRI CASTG 4 cut(s) 177, 484, 871, 1080
VneI GTGCAC 1 cut(s) 654
VpaK11BI GGWCC 2 cut(s) 196, 1883
XagI CCTNNNNNAGG 1 cut(s) 1993
XapI RAATTY 5 cut(s) 268, 361, 898, 1661, 2002
XceI RCATGY 3 cut(s) 1333, 1605, 1985
XmiI GTMKAC 2 cut(s) 159, 1704
XspI CTAG 3 cut(s) 945, 1250, 1325
ZrmI AGTACT 1 cut(s) 1303
Zsp2I ATGCAT 2 cut(s) 1504, 1603
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.