Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000005

Orthogroup ID

OG0003199

Physical Location & Seq

Genomic Coordinates Reverse (-)

78899473 .. 78904853

Gene Structure 5381 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug05G0590800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2196 bp

ATGGTGAAGACCATTAGTGAATTGGGATTGGTTGACTTGGTTCATGCAGGCCTGACCATCAATGAGGCCAAGGACTTCGAAGCTGTCCTTAAGCAGACGATCTCTGCAACCAACACCACGTCATTTGATCCAGGAGAGGTGTGGAGGCAGATAGTGGCTCAGAAATTGCTGAAACCTTCACACCCACATGAGCTGCACCAACTGGTTTACTACTCCGTCTATGCCAATTGGGATGTCTCCAACAGAGGCCCTCCACTCTACTGGTTCCCTTCTCTATATGAGTCTAGACACACAAACTTGGGCCGAGTGATGGAAATGCATGGTTCACAGCTTTTAGGAACATCATATAAGGATCCTATAACAACTTTTAGCCTTTTCCAGAAATTTTCTGTTGAGAATCCCGAGGCTTACTGGTCAATTATTCTAAAAGAGCTCTCAATTTCATTTCGAGAGGCCCCAAAGTGTATTCTTGATAGGACTGAAAAATCGAAGCATGGGGGAGTTTGGCTTCAAGATTCAGTTCTGAATATAGCTGAATGCTGTTTGCTACCCATCAGACATCCAAGGAGAGAGGATGGCAGTGTGGCTGTTATATGGAGAGATGAAGGCTGTGATGATTCTGCTGTAAATTGTATGACACTAAAAGAACTTCGGGAACAAGTAATGTTGGTGGCTAATGCACTAGACCAGGATGCAACCTTTTCAAAGGGTGATGCCATCGCAATTGACATGCCAATGACAGTCAGTGCAGTTATCATATATTTGGCAATCATACTAGCAGGATATGTAGTTGTATCAATAGCTGACAGTTTCGCTGTTAACGAAATTGCAACTCGTCTGCGTGTGTCTAAAGCAAAGGGAATCTTTACCCAGGATTTCATAATACGAGGAGGTCGTAAATTTCCTCTGTACAGTCGGGTTGTGGATGCTGCTCCATGTAAAGCTATTGTGCTTCCAGCAATTGAGAACAGTGTAGGCATTCAATTACGAGAACAGGATATATCCTGGAATGACTTTCTGTCTAGTGTCAATCATCTGCCGAGAAAGAATTACTACGCTCCAGTCTATCAGCCAATAGACTCCATGACAAATATTCTCTTTTCATCAGGAACTACAGGAGATCCAAAAGCTATCCCATGGACACAACTTTCGCCAATTCGATGTGCAGCTGATTCATGGGCTCACATTGATACTCAAGTTGGAGATGTCTTCTGCTGGCCCACAAATTTAGGATGGGTTATGGGTCCAATTTTAATCTACTCATGCTTTCTAAGTGGTGCAACTCTTGCTCTCTATCATGGATCTCCTCTAGGTCGTGGCTTCGGAAAGTTTGTTCAGGATGCAGGAGTCACTATTTTGGGTACAGTTCCCAGCTTAGTAAAAGCTTGGAAGAGTACAGAGTGTATGAAAGGCCTAGATTGGACAAAGATAAAATCATTCGCTTCGACTGGTGAAGCATCTAACGTCGATGACGACCTTTGGCTCTCTTCCCGTGCTTATTACAAGCCCATCCTTGAATGCTGTGGAGGCACAGAACTTGCTTCATCCTACATAATGGCAAGTCCACTGCAGCCACAAGCTTTTGGGACCTTTAGCACAAAGTCGATGACAACAGGCTTTGTCATCCTTGATGAAAGTGGAGTTTCTTACCCAGATGATGAAGCTTGTGTTGGGGAAGTGGGTTTATTCCCTCTGTACATGGGAGCAACTGATAGATTGCTAAATGCTGACCATGAAGAAGTCTACTTCAAGGGAATGCCAATGTACAATGGAATGCAACTCAGGAGACATGGAGACATAATCAAAAGAACAGTTGGGGGCTACTTCATTGTTCAAGGCAGGGCTGATGACACCATGAACCTTGGTGGCATCAAGACAAGTTCTATTGAAATTGAGCGTGTATGTGACCGGTCTGATGAAAGTATCTTGGAGACAGCTGCAGTTAGTGTTGCACCAGTGAATGGGGGTCCGGAACAGTTGGTTATATATGTGGTATTAAAGAAGGGATTTGAGACCAAAGCAGACGAGCTAAAGACAAAATTCTCAAGAGCCATTCATAGCAACCTTAACCCTTTGTTCAAGGTGAGCTTGGTCAAGATTGTTGCAGAGTTTCCTCGAACAGCTTCTAATAAGTTATTGAGAAGAGTTTTGAGGGACCAAATGAAGCATGAGCTTTCTGTTCGGAGTAGAATGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016553 GO:0016554 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR

Protein Analysis

731

Amino Acids

81.12

Weight (kDa)

6.24

Isoelectric Point (pI)

39.36

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AMP-binding	PF00501	195 - 560	3.4e-37	AMP-binding enzyme

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003199)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G62260
fragaria_vesca	FvH4_2g07250
malus_domestica	MD10G1129300.v1.1
prunus_persica	Prupe.8G170100_v2.0.a1 Prupe.8G170100_v2.0.a1
pyrus_communis	pycom06g17110 pycom10g11090
rosa_chinensis	RchiOBHm_Chr6g0259851 RchiOBHm_Chr6g0279101
rosa_laevigata	RLG00000013168 RLG00000014504
rosa_multiflora	Rmu_co8522155.1_g000002 Rmu_sc0002080.1_g000004 Rmu_sc0009049.1_g000004 Rmu_sc0037609.1_g000001 Rmu_sc0037609.1_g000002 Rmu_sc0037609.1_g000003
rosa_roxburghii	Rroxscaffold_7G00189130 Rroxscaffold_7G00207040 Rroxscaffold_7G00207050 Rroxscaffold_7G00207060 Rroxscaffold_7G00207180 Rroxscaffold_7G00207190 Rroxscaffold_7G00207200
rosa_rugosa	Rorug05G0590700 Rorug05G0590800 Rorug06G0122200
rosa_samantha	Rh6AG107400 Rh6AG230900 Rh6BG102900 Rh6BG235800 Rh6DG090200 Rh6DG229500
rosa_wichuraiana	Rw0G019930 Rw0G021150 Rw6G009260 Rw6G020220

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	1 cut(s)	1961
AccI	GTMKAC	1 cut(s)	1743
AccIII	TCCGGA	1 cut(s)	1969
AclWI	GGATC	5 cut(s)	122, 347, 360, 1115, 1309
AcsI	RAATTY	4 cut(s)	383, 899, 1225, 2039
AfaI	GTAC	5 cut(s)	911, 1363, 1396, 1697, 1766
AfiI	CCNNNNNNNGG	2 cut(s)	310, 1961
AflII	CTTAAG	1 cut(s)	89
AgeI	ACCGGT	1 cut(s)	1908
AgsI	TTSAA	8 cut(s)	512, 705, 983, 1517, 1750, 1835, 1889, 2080
AhdI	GACNNNNNGTC	1 cut(s)	1018
AjiI	CACGTC	1 cut(s)	120
AjnI	CCWGG	4 cut(s)	130, 687, 870, 1004
AjuI	GAANNNNNNNTTGG	2 cut(s)	1653, 1685
AloI	GAACNNNNNNTCC	2 cut(s)	1317, 1349
Alw21I	GWGCWC	1 cut(s)	435
Alw26I	GTCTC	5 cut(s)	241, 1780, 1788, 1925, 2006
AlwI	GGATC	5 cut(s)	122, 347, 360, 1115, 1309
Ama87I	CYCGRG	1 cut(s)	401
Aor13HI	TCCGGA	1 cut(s)	1969
AoxI	GGCC	7 cut(s)	49, 66, 247, 301, 453, 1217, 1411
ApeKI	GCWGC	5 cut(s)	193, 929, 1166, 1570, 1937
ApoI	RAATTY	4 cut(s)	383, 899, 1225, 2039
ArsI	GACNNNNNNTTYG	2 cut(s)	1132, 1164
AsiGI	ACCGGT	1 cut(s)	1908
Asp700I	GAANNNNTTC	1 cut(s)	2122
AspS9I	GGNCC	8 cut(s)	248, 301, 454, 1218, 1244, 1587, 1967, 2155
AsuHPI	GGTGA	4 cut(s)	16, 722, 1463, 2095
AsuII	TTCGAA	1 cut(s)	78
AvaI	CYCGRG	1 cut(s)	401
AvaII	GGWCC	4 cut(s)	1244, 1587, 1967, 2155
BaeI	ACNNNNGTAYC	2 cut(s)	1182, 1215
BamHI	GGATCC	1 cut(s)	352
BanII	GRGCYC	2 cut(s)	435, 1183
BbsI	GAAGAC	2 cut(s)	14, 1201
Bbv12I	GWGCWC	1 cut(s)	435
BbvI	GCAGC	5 cut(s)	180, 916, 1178, 1582, 1924
BccI	CCATC	7 cut(s)	65, 304, 560, 569, 725, 1227, 1517
BciT130I	CCWGG	4 cut(s)	132, 689, 872, 1006
BcoDI	GTCTC	5 cut(s)	241, 1780, 1788, 1925, 2006
BfaI	CTAG	6 cut(s)	285, 683, 776, 1023, 1310, 1415
BfmI	CTRYAG	3 cut(s)	1113, 1568, 1938
BfrI	CTTAAG	1 cut(s)	89
BisI	GCNGC	5 cut(s)	194, 930, 1167, 1571, 1938
BlsI	GCNGC	5 cut(s)	195, 931, 1168, 1572, 1939
Bme1390I	CCNGG	4 cut(s)	132, 689, 872, 1006
Bme18I	GGWCC	4 cut(s)	1244, 1587, 1967, 2155
BmeRI	GACNNNNNGTC	1 cut(s)	1018
BmeT110I	CYCGRG	1 cut(s)	401
BmgBI	CACGTC	1 cut(s)	120
BmgT120I	GGNCC	8 cut(s)	248, 301, 454, 1218, 1244, 1587, 1967, 2155
BmiI	GGNNCC	7 cut(s)	266, 354, 456, 1245, 1588, 1968, 2156
BmrFI	CCNGG	4 cut(s)	132, 689, 872, 1006
BmsI	GCATC	6 cut(s)	682, 703, 916, 1330, 1466, 1878
BpiI	GAAGAC	2 cut(s)	14, 1201
BpmI	CTGGAG	1 cut(s)	1044
Bpu14I	TTCGAA	1 cut(s)	78
BpuEI	CTTGAG	2 cut(s)	1179, 2029
BsaI	GGTCTC	1 cut(s)	2006
BsaJI	CCNNGG	6 cut(s)	69, 402, 563, 870, 1136, 1861
BsaWI	WCCGGW	2 cut(s)	1908, 1969
Bsc4I	CCNNNNNNNGG	2 cut(s)	310, 1961
Bse118I	RCCGGY	1 cut(s)	1908
Bse1I	ACTGG	6 cut(s)	207, 266, 416, 1061, 1453, 1955
BseAI	TCCGGA	1 cut(s)	1969
BseBI	CCWGG	4 cut(s)	132, 689, 872, 1006
BseDI	CCNNGG	6 cut(s)	69, 402, 563, 870, 1136, 1861
BseLI	CCNNNNNNNGG	2 cut(s)	310, 1961
BseMII	CTCAG	2 cut(s)	173, 1795
BseNI	ACTGG	6 cut(s)	207, 266, 416, 1061, 1453, 1955
BseRI	GAGGAG	2 cut(s)	903, 1296
BseXI	GCAGC	5 cut(s)	180, 916, 1178, 1582, 1924
BseYI	CCCAGC	1 cut(s)	1370
BsgI	GTGCAG	3 cut(s)	179, 768, 1185
BshFI	GGCC	7 cut(s)	51, 68, 249, 303, 455, 1219, 1413
BshTI	ACCGGT	1 cut(s)	1908
BsiHKAI	GWGCWC	1 cut(s)	435
BsiHKCI	CYCGRG	1 cut(s)	401
BsiSI	CCGG	2 cut(s)	1909, 1970
BslFI	GGGAC	2 cut(s)	1600, 2168
BslI	CCNNNNNNNGG	2 cut(s)	310, 1961
BsmAI	GTCTC	5 cut(s)	241, 1780, 1788, 1925, 2006
BsmFI	GGGAC	2 cut(s)	1600, 2168
BsmI	GAATGC	5 cut(s)	542, 978, 1523, 1761, 1779
BsnI	GGCC	7 cut(s)	51, 68, 249, 303, 455, 1219, 1413
Bso31I	GGTCTC	1 cut(s)	2006
BsoBI	CYCGRG	1 cut(s)	401
Bsp119I	TTCGAA	1 cut(s)	78
Bsp1286I	GDGCHC	2 cut(s)	435, 1183
Bsp13I	TCCGGA	1 cut(s)	1969
Bsp1407I	TGTACA	3 cut(s)	909, 1695, 1764
Bsp143I	GATC	5 cut(s)	99, 127, 352, 1120, 1301
Bsp19I	CCATGG	1 cut(s)	1136
BspANI	GGCC	7 cut(s)	51, 68, 249, 303, 455, 1219, 1413
BspCNI	CTCAG	2 cut(s)	172, 1794
BspEI	TCCGGA	1 cut(s)	1969
BspLI	GGNNCC	7 cut(s)	266, 354, 456, 1245, 1588, 1968, 2156
BspMAI	CTGCAG	2 cut(s)	1572, 1942
BspPI	GGATC	5 cut(s)	122, 347, 360, 1115, 1309
BspT104I	TTCGAA	1 cut(s)	78
BspTI	CTTAAG	1 cut(s)	89
BspTNI	GGTCTC	1 cut(s)	2006
BsrFI	RCCGGY	1 cut(s)	1908
BsrGI	TGTACA	3 cut(s)	909, 1695, 1764
BsrI	ACTGG	6 cut(s)	207, 266, 416, 1061, 1453, 1955
BssAI	RCCGGY	1 cut(s)	1908
BssECI	CCNNGG	6 cut(s)	69, 402, 563, 870, 1136, 1861
BssMI	GATC	5 cut(s)	99, 127, 352, 1120, 1301
BssT1I	CCWWGG	4 cut(s)	69, 563, 1136, 1861
Bst2UI	CCWGG	4 cut(s)	132, 689, 872, 1006
Bst4CI	ACNGT	7 cut(s)	742, 809, 914, 971, 1366, 1813, 1977
Bst6I	CTCTTC	3 cut(s)	1385, 1492, 2137
BstAFI	CTTAAG	1 cut(s)	89
BstAPI	GCANNNNNTGC	1 cut(s)	1286
BstAUI	TGTACA	3 cut(s)	909, 1695, 1764
BstBI	TTCGAA	1 cut(s)	78
BstC8I	GCNNGC	2 cut(s)	49, 1217
BstDEI	CTNAG	4 cut(s)	159, 1271, 1375, 1781
BstDSI	CCRYGG	1 cut(s)	1136
BstKTI	GATC	5 cut(s)	102, 130, 355, 1123, 1304
BstMAI	GTCTC	5 cut(s)	241, 1780, 1788, 1925, 2006
BstMBI	GATC	5 cut(s)	99, 127, 352, 1120, 1301
BstMWI	GCNNNNNNNGC	2 cut(s)	1286, 1527
BstNI	CCWGG	4 cut(s)	132, 689, 872, 1006
BstNSI	RCATGY	1 cut(s)	733
BstSCI	CCNGG	4 cut(s)	130, 687, 870, 1004
BstSFI	CTRYAG	3 cut(s)	1113, 1568, 1938
BstV1I	GCAGC	5 cut(s)	180, 916, 1178, 1582, 1924
BstV2I	GAAGAC	2 cut(s)	14, 1201
BstX2I	RGATCY	3 cut(s)	352, 1120, 1301
BstXI	CCANNNNNNTGG	1 cut(s)	261
BstYI	RGATCY	3 cut(s)	352, 1120, 1301
BsuRI	GGCC	7 cut(s)	51, 68, 249, 303, 455, 1219, 1413
BtgI	CCRYGG	1 cut(s)	1136
BtgZI	GCGATG	1 cut(s)	703
BtrI	CACGTC	1 cut(s)	120
BtsI	GCAGTG	2 cut(s)	586, 1565
BtsIMutI	CAGTG	5 cut(s)	586, 751, 976, 1565, 1962
Cac8I	GCNNGC	2 cut(s)	49, 1217
Cfr10I	RCCGGY	1 cut(s)	1908
Cfr13I	GGNCC	8 cut(s)	248, 301, 454, 1218, 1244, 1587, 1967, 2155
Csp6I	GTAC	5 cut(s)	910, 1362, 1395, 1696, 1765
CspAI	ACCGGT	1 cut(s)	1908
CspCI	CAANNNNNGTGG	2 cut(s)	106, 141
CviQI	GTAC	5 cut(s)	910, 1362, 1395, 1696, 1765
DdeI	CTNAG	4 cut(s)	159, 1271, 1375, 1781
DpnI	GATC	5 cut(s)	101, 129, 354, 1122, 1303
DpnII	GATC	5 cut(s)	99, 127, 352, 1120, 1301
DriI	GACNNNNNGTC	1 cut(s)	1018
Eam1104I	CTCTTC	3 cut(s)	1385, 1492, 2137
Eam1105I	GACNNNNNGTC	1 cut(s)	1018
EarI	CTCTTC	3 cut(s)	1385, 1492, 2137
Ecl136II	GAGCTC	1 cut(s)	433
Eco130I	CCWWGG	4 cut(s)	69, 563, 1136, 1861
Eco147I	AGGCCT	2 cut(s)	51, 1413
Eco24I	GRGCYC	2 cut(s)	435, 1183
Eco31I	GGTCTC	1 cut(s)	2006
Eco47I	GGWCC	4 cut(s)	1244, 1587, 1967, 2155
Eco53kI	GAGCTC	1 cut(s)	433
Eco88I	CYCGRG	1 cut(s)	401
EcoICRI	GAGCTC	1 cut(s)	433
EcoO109I	RGGNCCY	3 cut(s)	248, 454, 1587
EcoRII	CCWGG	4 cut(s)	130, 687, 870, 1004
EcoT14I	CCWWGG	4 cut(s)	69, 563, 1136, 1861
EcoT22I	ATGCAT	1 cut(s)	321
EcoT38I	GRGCYC	2 cut(s)	435, 1183
ErhI	CCWWGG	4 cut(s)	69, 563, 1136, 1861
FalI	AAGNNNNNCTT	6 cut(s)	72, 104, 848, 880, 2072, 2104
FaqI	GGGAC	2 cut(s)	1600, 2168
FblI	GTMKAC	1 cut(s)	1743
Fnu4HI	GCNGC	5 cut(s)	194, 930, 1167, 1571, 1938
FriOI	GRGCYC	2 cut(s)	435, 1183
Fsp4HI	GCNGC	5 cut(s)	194, 930, 1167, 1571, 1938
FspBI	CTAG	6 cut(s)	285, 683, 776, 1023, 1310, 1415
GluI	GCNGC	5 cut(s)	194, 930, 1167, 1571, 1938
GsaI	CCCAGC	1 cut(s)	1374
GsuI	CTGGAG	1 cut(s)	1044
HaeIII	GGCC	7 cut(s)	51, 68, 249, 303, 455, 1219, 1413
HapII	CCGG	2 cut(s)	1909, 1970
HincII	GTYRAC	2 cut(s)	34, 820
HindII	GTYRAC	2 cut(s)	34, 820
HindIII	AAGCTT	3 cut(s)	1383, 1578, 1662
HinfI	GANTC	8 cut(s)	281, 397, 515, 617, 861, 1079, 1172, 1347
HpaI	GTTAAC	1 cut(s)	820
HpaII	CCGG	2 cut(s)	1909, 1970
HphI	GGTGA	4 cut(s)	16, 722, 1463, 2095
Hpy166II	GTNNAC	6 cut(s)	34, 208, 326, 820, 1565, 1744
Hpy188I	TCNGA	6 cut(s)	162, 525, 557, 1325, 1915, 2184
Hpy8I	GTNNAC	6 cut(s)	34, 208, 326, 820, 1565, 1744
Hpy99I	CGWCG	1 cut(s)	1469
HpyAV	CCTTC	4 cut(s)	186, 279, 599, 1996
HpyCH4III	ACNGT	7 cut(s)	742, 809, 914, 971, 1366, 1813, 1977
HpyCH4IV	ACGT	2 cut(s)	119, 1464
HpyF10VI	GCNNNNNNNGC	2 cut(s)	1286, 1527
HpyF3I	CTNAG	4 cut(s)	159, 1271, 1375, 1781
HpySE526I	ACGT	2 cut(s)	119, 1464
Kpn2I	TCCGGA	1 cut(s)	1969
KspAI	GTTAAC	1 cut(s)	820
Kzo9I	GATC	5 cut(s)	99, 127, 352, 1120, 1301
LmnI	GCTCC	3 cut(s)	937, 1063, 1703
Lsp1109I	GCAGC	5 cut(s)	180, 916, 1178, 1582, 1924
LweI	GCATC	6 cut(s)	682, 703, 916, 1330, 1466, 1878
MaeI	CTAG	6 cut(s)	285, 683, 776, 1023, 1310, 1415
MaeII	ACGT	2 cut(s)	119, 1464
MaeIII	GTNAC	2 cut(s)	1348, 1904
MalI	GATC	5 cut(s)	101, 129, 354, 1122, 1303
MboI	GATC	5 cut(s)	99, 127, 352, 1120, 1301
MboII	GAAGA	6 cut(s)	19, 1201, 1402, 1479, 1748, 2154
MfeI	CAATTG	3 cut(s)	226, 723, 960
MflI	RGATCY	3 cut(s)	352, 1120, 1301
MhlI	GDGCHC	2 cut(s)	435, 1183
MlyI	GAGTC	3 cut(s)	290, 1073, 1356
MmeI	TCCRAC	2 cut(s)	264, 1180
Mph1103I	ATGCAT	1 cut(s)	321
MroI	TCCGGA	1 cut(s)	1969
MroXI	GAANNNNTTC	1 cut(s)	2122
MseI	TTAA	5 cut(s)	90, 819, 1253, 1997, 2067
MslI	CAYNNNNRTG	2 cut(s)	186, 734
MspA1I	CMGCKG	2 cut(s)	1169, 1937
MspCI	CTTAAG	1 cut(s)	89
MspI	CCGG	2 cut(s)	1909, 1970
MspR9I	CCNGG	4 cut(s)	132, 689, 872, 1006
MunI	CAATTG	3 cut(s)	226, 723, 960
Mva1269I	GAATGC	5 cut(s)	542, 978, 1523, 1761, 1779
MvaI	CCWGG	4 cut(s)	132, 689, 872, 1006
MwoI	GCNNNNNNNGC	2 cut(s)	1286, 1527
NcoI	CCATGG	1 cut(s)	1136
NdeII	GATC	5 cut(s)	99, 127, 352, 1120, 1301
NlaIV	GGNNCC	7 cut(s)	266, 354, 456, 1245, 1588, 1968, 2156
NmeAIII	GCCGAG	2 cut(s)	329, 1065
NmuCI	GTSAC	2 cut(s)	1348, 1904
NsiI	ATGCAT	1 cut(s)	321
NspI	RCATGY	1 cut(s)	733
NspV	TTCGAA	1 cut(s)	78
PceI	AGGCCT	2 cut(s)	51, 1413
PcsI	WCGNNNNNNNCGW	3 cut(s)	819, 892, 1470
PctI	GAATGC	5 cut(s)	542, 978, 1523, 1761, 1779
PdmI	GAANNNNTTC	1 cut(s)	2122
PfeI	GAWTC	5 cut(s)	397, 515, 617, 861, 1172
PflMI	CCANNNNNTGG	1 cut(s)	1961
PfoI	TCCNGGA	2 cut(s)	130, 1004
PinAI	ACCGGT	1 cut(s)	1908
PkrI	GCNGC	5 cut(s)	195, 931, 1168, 1572, 1939
PleI	GAGTC	3 cut(s)	289, 1073, 1355
PpsI	GAGTC	3 cut(s)	289, 1073, 1355
PpuMI	RGGWCCY	1 cut(s)	1587
Psp124BI	GAGCTC	1 cut(s)	435
Psp5II	RGGWCCY	1 cut(s)	1587
Psp6I	CCWGG	4 cut(s)	130, 687, 870, 1004
PspFI	CCCAGC	1 cut(s)	1370
PspGI	CCWGG	4 cut(s)	130, 687, 870, 1004
PspN4I	GGNNCC	7 cut(s)	266, 354, 456, 1245, 1588, 1968, 2156
PspPI	GGNCC	8 cut(s)	248, 301, 454, 1218, 1244, 1587, 1967, 2155
PspPPI	RGGWCCY	1 cut(s)	1587
PstI	CTGCAG	2 cut(s)	1572, 1942
PsuI	RGATCY	3 cut(s)	352, 1120, 1301
PvuII	CAGCTG	2 cut(s)	1169, 1937
RsaI	GTAC	5 cut(s)	911, 1363, 1396, 1697, 1766
RsaNI	GTAC	5 cut(s)	910, 1362, 1395, 1696, 1765
RseI	CAYNNNNRTG	2 cut(s)	186, 734
SacI	GAGCTC	1 cut(s)	435
SaqAI	TTAA	5 cut(s)	90, 819, 1253, 1997, 2067
SatI	GCNGC	5 cut(s)	194, 930, 1167, 1571, 1938
Sau3AI	GATC	5 cut(s)	99, 127, 352, 1120, 1301
Sau96I	GGNCC	8 cut(s)	248, 301, 454, 1218, 1244, 1587, 1967, 2155
SchI	GAGTC	3 cut(s)	290, 1073, 1356
ScrFI	CCNGG	4 cut(s)	132, 689, 872, 1006
SduI	GDGCHC	2 cut(s)	435, 1183
SfaNI	GCATC	6 cut(s)	682, 703, 916, 1330, 1466, 1878
SfcI	CTRYAG	3 cut(s)	1113, 1568, 1938
SfuI	TTCGAA	1 cut(s)	78
SinI	GGWCC	4 cut(s)	1244, 1587, 1967, 2155
SmiMI	CAYNNNNRTG	2 cut(s)	186, 734
SmlI	CTYRAG	3 cut(s)	89, 1194, 2044
SmoI	CTYRAG	3 cut(s)	89, 1194, 2044
SseBI	AGGCCT	2 cut(s)	51, 1413
SspI	AATATT	1 cut(s)	1093
SspMI	CTAG	6 cut(s)	285, 683, 776, 1023, 1310, 1415
SstI	GAGCTC	1 cut(s)	435
StuI	AGGCCT	2 cut(s)	51, 1413
StyD4I	CCNGG	4 cut(s)	130, 687, 870, 1004
StyI	CCWWGG	4 cut(s)	69, 563, 1136, 1861
TaaI	ACNGT	7 cut(s)	742, 809, 914, 971, 1366, 1813, 1977
TaiI	ACGT	2 cut(s)	122, 1467
TaqI	TCGA	8 cut(s)	78, 448, 488, 1159, 1445, 1467, 1604, 2116
TatI	WGTACW	4 cut(s)	909, 1394, 1695, 1764
TfiI	GAWTC	5 cut(s)	397, 515, 617, 861, 1172
Tru1I	TTAA	5 cut(s)	90, 819, 1253, 1997, 2067
Tru9I	TTAA	5 cut(s)	90, 819, 1253, 1997, 2067
TscAI	CASTG	5 cut(s)	586, 751, 976, 1572, 1962
TseFI	GTSAC	2 cut(s)	1348, 1904
TseI	GCWGC	5 cut(s)	193, 929, 1166, 1570, 1937
Tsp45I	GTSAC	2 cut(s)	1348, 1904
TspGWI	ACGGA	1 cut(s)	205
TspRI	CASTG	5 cut(s)	586, 751, 976, 1572, 1962
Van91I	CCANNNNNTGG	1 cut(s)	1961
Vha464I	CTTAAG	1 cut(s)	89
VpaK11BI	GGWCC	4 cut(s)	1244, 1587, 1967, 2155
XapI	RAATTY	4 cut(s)	383, 899, 1225, 2039
XbaI	TCTAGA	1 cut(s)	284
XceI	RCATGY	1 cut(s)	733
XcmI	CCANNNNNNNNNTGG	2 cut(s)	19, 138
XmiI	GTMKAC	1 cut(s)	1743
XmnI	GAANNNNTTC	1 cut(s)	2122
XspI	CTAG	6 cut(s)	285, 683, 776, 1023, 1310, 1415
Zsp2I	ATGCAT	1 cut(s)	321

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.