RLG00000013168

Pentatricopeptide repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr3
OG0003199
Physical Location & Seq
Forward (+)
26953983 .. 26956723
2741 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000013168

Sequence Viewer

Length: 1902 bp
ATGATGATTCTGGGTAATGCAAATGGTTTCATATATAAACTCATGCCCCGAGCTCCTATTATTCTTCGTCTACTCACCATCCCATTACCCAATCACGCATCCCTACAGCACTCTTGTTTTGCCTCAACTTCAAAACCCAGTAGTCATGCCAAAGACGTAGACTTTTTTTCACTGAACAGAAGGATCTCCCATTTGATCCGAACTGGTCAGACAGAGCAAGCCAGGGAGGCCTTTGACAAGATGAAGCAACGGAATATCGTAACTTGGAATTCAATGATAACCGGGTATGTGAAACGCCGAGAGATGGCCAAGGCCCGGAAGCTGTTCGACGAAATGCCTGAGAGAGACGTTGTGTCCTGGAATTTGATGATATCCGGGTACGTTTCGTGCCGCGGAAGTCGTCGGTATGTTGAGGAGGGGAGGATTTTGTTTGATCAGATGCCGGTGAGGGATTGTGTTTCTTGGAACACAATGATCAGTGGGTATGCCAAGAATGGGAGGATGGGGGAGGCATTGCGGCTTTTTGATGCTATGCCGCAGAGGAGTGTTGTTTCTTGGAATGCAATGGTTACCGGGTTTCTACAGAATGGTGATGTTGTGCGTGCGATTGAGTTTTTCGAGAGAATGCCGCAGAGGGATGGGGCTTCTCTTAGTGCACTCGTGTCGGGGCTTATTCAGAATGGTGAGCTGGATGAAGCTGCGAGGATTGTTGGTGAATGTGGGAAGAGGGATGAGGAGGGGGTGGAAGATTTGGTGGATGCTTATAATACGTTGGTTGCTGGTTATGGTCAGAGAGGAAGGGTTGAAGAGGCTCGGTGCCTATTTGATCAAATACCATTTTGTCGTGAGAAGGGGAATGAGGACAGTGGGAGGTTTGAGAGGAATGTTGTATCGTGGAATTCTATGATTATGTGCTATGTGAAAACAGGAAATATTGTTTCTGCTAGAGAACTTTTTGACCAAATGATAGAACGAGATACCTTTTCGTGGAATACCATGATCAGCGGCTATGTTCATATGTCAGATATGGAAGAGGCTGCCAATCTCTTTCGTAGAATGCCAAATCCTGATACACTGTCATGGAATGCAATGATCTTAGGGTATGCCCAGGTTGGGCGTTTAAATCTAGCTCATGATTTTTTTGAGAGGATGCCACACAAGAGTCTAATATCTTGGAACTCCATGATAGCGGGGTATGAGAAAAATGAGGACTTTATGGGTGGAGTTAAGCTTTTCTCTCAGATGCAACTAGAAGGAGAGAAACCTGATAGACACACTTTATCATCAGTTCTTAGTGTGAGTACTGGGTTAGTAGATCTGCATCTAGGCATGCAGATTCATCAGCTGGTCATGAAGACAGTTATTGCAGATTTGCCAATAAACAACTCTCTTATAACTATGTATTCACGATGTGGTGCTATCAAAGAGGCAGAAACAATTTTTGATGAGATGAAACAGCAGAAAGATGTGATCTCCTGGAATGCAATGATTGGGGGCTATGCATCTCATGGTTTTGCTGCAGAGGCTTTAGGACTTTTTTGTTTCATGAAGAGGTCAAAGGTGCAACCTACATATATAACATTTATTGCAGTTTTAAATGCATGTGCTCATGCAGGATTAGTTGAAGAAGGCCGGAGTCAATTTAAATCCATGATTAGTGAATTTGGCATTGAGCCACGTATTGAACACTATGCCTCCCTTGTGGACATCATTGGTCGGCACGGGCAGCTTGAGGAGGCTCACGATTTGATCAATAAGGGATTGGAGGTTGAATTTTCAGTATTCCAAGACCTTCCTCACTTGGCAACTCCATTGAGAACCTTTACTGTTCACAGAATCGACTATGACAATACATCAGCCTGGAGAAAATATGACTCAAGTAAGGATCTCTATCATGAGTAG

Protein Analysis

634

Amino Acids

71.97

Weight (kDa)

6.25

Isoelectric Point (pI)

43.31

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 84 - 116 3.6e-09 PPR repeat family
PPR PF01535 87 - 116 2.2e-08 PPR repeat
PPR_1 PF12854 150 - 178 1.4e-08 PPR repeat
PPR_2 PF13041 151 - 183 1.4e-08 PPR repeat family
PPR PF01535 153 - 181 1.1e-09 PPR repeat
PPR PF01535 184 - 212 8.3e-06 PPR repeat
PPR_2 PF13041 294 - 325 1.9e-06 PPR repeat family
PPR PF01535 297 - 325 5.2e-08 PPR repeat
PPR PF01535 328 - 353 1.4e-06 PPR repeat
PPR_2 PF13041 389 - 431 1.4e-07 PPR repeat family
PPR_2 PF13041 488 - 537 8.6e-10 PPR repeat family
PPR PF01535 491 - 520 1.3e-06 PPR repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 765, 1394
AccB1I GGYRCC 1 cut(s) 816
AccI GTMKAC 2 cut(s) 70, 159
AccII CGCG 1 cut(s) 393
AciI CCGC 7 cut(s) 391, 393, 517, 536, 629, 1005, 1190
AclWI GGATC 3 cut(s) 190, 191, 1893
AcoI YGGCCR 1 cut(s) 306
AcsI RAATTY 5 cut(s) 268, 361, 898, 1661, 1772
AdeI CACNNNGTG 1 cut(s) 1412
AfaI GTAC 2 cut(s) 380, 1303
AfiI CCNNNNNNNGG 5 cut(s) 304, 315, 495, 987, 1113
AgsI TTSAA 6 cut(s) 132, 273, 806, 1625, 1685, 1772
AhdI GACNNNNNGTC 1 cut(s) 352
AjnI CCWGG 5 cut(s) 221, 356, 1107, 1475, 1859
AluBI AGCT 8 cut(s) 53, 322, 688, 698, 1130, 1231, 1345, 1729
AluI AGCT 8 cut(s) 53, 322, 688, 698, 1130, 1231, 1345, 1729
Alw21I GWGCWC 3 cut(s) 55, 658, 1609
Alw26I GTCTC 1 cut(s) 339
Alw44I GTGCAC 1 cut(s) 654
AlwI GGATC 3 cut(s) 190, 191, 1893
Ama87I CYCGRG 1 cut(s) 48
AoxI GGCC 4 cut(s) 228, 306, 312, 1630
ApaLI GTGCAC 1 cut(s) 654
ApeKI GCWGC 4 cut(s) 698, 1037, 1517, 1726
ApoI RAATTY 5 cut(s) 268, 361, 898, 1661, 1772
Asp700I GAANNNNTTC 1 cut(s) 323
AspS9I GGNCC 1 cut(s) 313
AsuC2I CCSGG 4 cut(s) 283, 316, 376, 574
AsuHPI GGTGA 5 cut(s) 67, 457, 602, 695, 725
AvaI CYCGRG 1 cut(s) 48
BaeGI GKGCMC 1 cut(s) 658
BalI TGGCCA 1 cut(s) 308
BanI GGYRCC 1 cut(s) 816
BanII GRGCYC 1 cut(s) 55
BauI CACGAG 1 cut(s) 659
BbsI GAAGAC 1 cut(s) 1361
Bbv12I GWGCWC 3 cut(s) 55, 658, 1609
BbvI GCAGC 4 cut(s) 685, 1024, 1504, 1738
BccI CCATC 4 cut(s) 86, 298, 496, 632
BcgI CGANNNNNNTGC 2 cut(s) 645, 679
BciT130I CCWGG 5 cut(s) 223, 358, 1109, 1477, 1861
BclI TGATCA 5 cut(s) 433, 474, 826, 999, 1749
BcnI CCSGG 4 cut(s) 283, 316, 376, 574
BcoDI GTCTC 1 cut(s) 339
BfaI CTAG 4 cut(s) 945, 1127, 1250, 1325
BfmI CTRYAG 3 cut(s) 104, 581, 1518
BglI GCCNNNNNGGC 1 cut(s) 227
BglII AGATCT 1 cut(s) 1315
BisI GCNGC 9 cut(s) 391, 518, 536, 629, 699, 1006, 1038, 1518, 1727
BlsI GCNGC 9 cut(s) 392, 519, 537, 630, 700, 1007, 1039, 1519, 1728
BmcAI AGTACT 1 cut(s) 1303
Bme1390I CCNGG 9 cut(s) 223, 283, 316, 358, 376, 574, 1109, 1477, 1861
BmeRI GACNNNNNGTC 1 cut(s) 352
BmeT110I CYCGRG 1 cut(s) 48
BmgT120I GGNCC 1 cut(s) 313
BmiI GGNNCC 1 cut(s) 818
BmrFI CCNGG 9 cut(s) 223, 283, 316, 358, 376, 574, 1109, 1477, 1861
BmrI ACTGGG 2 cut(s) 132, 1314
BmsI GCATC 8 cut(s) 107, 429, 517, 748, 1140, 1233, 1330, 1511
BmuI ACTGGG 2 cut(s) 132, 1314
BpiI GAAGAC 1 cut(s) 1361
BpmI CTGGAG 1 cut(s) 1882
BpuEI CTTGAG 2 cut(s) 1751, 1861
BpuMI CCSGG 4 cut(s) 283, 316, 376, 574
BsaAI YACGTR 1 cut(s) 1679
BsaBI GATNNNNATC 2 cut(s) 1320, 1890
BsaJI CCNNGG 4 cut(s) 222, 309, 391, 1107
BsaXI ACNNNNNCTCC 2 cut(s) 1679, 1709
Bsc4I CCNNNNNNNGG 5 cut(s) 304, 315, 495, 987, 1113
Bse118I RCCGGY 1 cut(s) 442
Bse1I ACTGG 3 cut(s) 138, 208, 1309
Bse3DI GCAATG 4 cut(s) 512, 570, 1095, 1491
Bse8I GATNNNNATC 2 cut(s) 1320, 1890
BseBI CCWGG 5 cut(s) 223, 358, 1109, 1477, 1861
BseDI CCNNGG 4 cut(s) 222, 309, 391, 1107
BseGI GGATG 8 cut(s) 78, 98, 507, 643, 697, 736, 763, 1155
BseJI GATNNNNATC 2 cut(s) 1320, 1890
BseLI CCNNNNNNNGG 5 cut(s) 304, 315, 495, 987, 1113
BseMI GCAATG 4 cut(s) 512, 570, 1095, 1491
BseMII CTCAG 2 cut(s) 330, 1253
BseNI ACTGG 3 cut(s) 138, 208, 1309
BseRI GAGGAG 4 cut(s) 428, 556, 749, 1748
BseSI GKGCMC 1 cut(s) 658
BseXI GCAGC 4 cut(s) 685, 1024, 1504, 1738
Bsh1236I CGCG 1 cut(s) 393
BshFI GGCC 4 cut(s) 230, 308, 314, 1632
BshNI GGYRCC 1 cut(s) 816
BsiHKAI GWGCWC 3 cut(s) 55, 658, 1609
BsiHKCI CYCGRG 1 cut(s) 48
BsiSI CCGG 6 cut(s) 282, 316, 375, 443, 573, 1633
BslI CCNNNNNNNGG 5 cut(s) 304, 315, 495, 987, 1113
BsmAI GTCTC 1 cut(s) 339
BsmBI CGTCTC 1 cut(s) 339
BsmI GAATGC 5 cut(s) 565, 630, 1062, 1090, 1486
BsnI GGCC 4 cut(s) 230, 308, 314, 1632
BsoBI CYCGRG 1 cut(s) 48
Bsp1286I GDGCHC 3 cut(s) 55, 658, 1609
BspACI CCGC 7 cut(s) 391, 393, 517, 536, 629, 1005, 1190
BspANI GGCC 4 cut(s) 230, 308, 314, 1632
BspCNI CTCAG 2 cut(s) 331, 1252
BspFNI CGCG 1 cut(s) 393
BspHI TCATGA 4 cut(s) 1132, 1350, 1545, 1894
BspLI GGNNCC 1 cut(s) 818
BspMAI CTGCAG 1 cut(s) 1522
BspPI GGATC 3 cut(s) 190, 191, 1893
BspT107I GGYRCC 1 cut(s) 816
BsrDI GCAATG 4 cut(s) 512, 570, 1095, 1491
BsrFI RCCGGY 1 cut(s) 442
BsrI ACTGG 3 cut(s) 138, 208, 1309
BssAI RCCGGY 1 cut(s) 442
BssECI CCNNGG 4 cut(s) 222, 309, 391, 1107
BssSI CACGAG 1 cut(s) 659
BssT1I CCWWGG 1 cut(s) 309
Bst2BI CACGAG 1 cut(s) 659
Bst2UI CCWGG 5 cut(s) 223, 358, 1109, 1477, 1861
Bst4CI ACNGT 4 cut(s) 866, 1077, 1360, 1828
Bst6I CTCTTC 4 cut(s) 719, 801, 1026, 1544
BstBAI YACGTR 1 cut(s) 1679
BstC8I GCNNGC 3 cut(s) 219, 603, 1331
BstDEI CTNAG 5 cut(s) 339, 650, 1096, 1239, 1292
BstDSI CCRYGG 1 cut(s) 391
BstEII GGTNACC 1 cut(s) 568
BstF5I GGATG 8 cut(s) 78, 98, 507, 643, 697, 736, 763, 1155
BstFNI CGCG 1 cut(s) 393
BstMAI GTCTC 1 cut(s) 339
BstMWI GCNNNNNNNGC 3 cut(s) 227, 1523, 1726
BstNI CCWGG 5 cut(s) 223, 358, 1109, 1477, 1861
BstNSI RCATGY 2 cut(s) 1333, 1605
BstPI GGTNACC 1 cut(s) 568
BstSCI CCNGG 9 cut(s) 221, 281, 314, 356, 374, 572, 1107, 1475, 1859
BstSFI CTRYAG 3 cut(s) 104, 581, 1518
BstSLI GKGCMC 1 cut(s) 658
BstUI CGCG 1 cut(s) 393
BstV1I GCAGC 4 cut(s) 685, 1024, 1504, 1738
BstV2I GAAGAC 1 cut(s) 1361
BstX2I RGATCY 3 cut(s) 183, 1315, 1885
BstYI RGATCY 3 cut(s) 183, 1315, 1885
BsuRI GGCC 4 cut(s) 230, 308, 314, 1632
BtgI CCRYGG 1 cut(s) 391
BtsCI GGATG 8 cut(s) 78, 98, 507, 643, 697, 736, 763, 1155
BtsIMutI CAGTG 4 cut(s) 170, 484, 871, 1073
Cac8I GCNNGC 3 cut(s) 219, 603, 1331
CciI TCATGA 4 cut(s) 1132, 1350, 1545, 1894
Cfr10I RCCGGY 1 cut(s) 442
Cfr13I GGNCC 1 cut(s) 313
Cfr42I CCGCGG 1 cut(s) 394
Csp6I GTAC 2 cut(s) 379, 1302
CviQI GTAC 2 cut(s) 379, 1302
DdeI CTNAG 5 cut(s) 339, 650, 1096, 1239, 1292
DraI TTTAAA 3 cut(s) 1122, 1596, 1645
DraIII CACNNNGTG 1 cut(s) 1412
DriI GACNNNNNGTC 1 cut(s) 352
EaeI YGGCCR 1 cut(s) 306
Eam1104I CTCTTC 4 cut(s) 719, 801, 1026, 1544
Eam1105I GACNNNNNGTC 1 cut(s) 352
EarI CTCTTC 4 cut(s) 719, 801, 1026, 1544
Ecl136II GAGCTC 1 cut(s) 53
Eco130I CCWWGG 1 cut(s) 309
Eco147I AGGCCT 1 cut(s) 230
Eco24I GRGCYC 1 cut(s) 55
Eco32I GATATC 1 cut(s) 372
Eco53kI GAGCTC 1 cut(s) 53
Eco88I CYCGRG 1 cut(s) 48
Eco91I GGTNACC 1 cut(s) 568
EcoICRI GAGCTC 1 cut(s) 53
EcoO65I GGTNACC 1 cut(s) 568
EcoRI GAATTC 2 cut(s) 268, 898
EcoRII CCWGG 5 cut(s) 221, 356, 1107, 1475, 1859
EcoRV GATATC 1 cut(s) 372
EcoT14I CCWWGG 1 cut(s) 309
EcoT22I ATGCAT 2 cut(s) 1504, 1603
EcoT38I GRGCYC 1 cut(s) 55
ErhI CCWWGG 1 cut(s) 309
Esp3I CGTCTC 1 cut(s) 339
FauI CCCGC 1 cut(s) 1183
FauNDI CATATG 1 cut(s) 1017
FbaI TGATCA 5 cut(s) 433, 474, 826, 999, 1749
FblI GTMKAC 2 cut(s) 70, 159
Fnu4HI GCNGC 9 cut(s) 391, 518, 536, 629, 699, 1006, 1038, 1518, 1727
FokI GGATG 8 cut(s) 65, 85, 514, 650, 704, 743, 770, 1162
FriOI GRGCYC 1 cut(s) 55
Fsp4HI GCNGC 9 cut(s) 391, 518, 536, 629, 699, 1006, 1038, 1518, 1727
FspBI CTAG 4 cut(s) 945, 1127, 1250, 1325
GluI GCNGC 9 cut(s) 391, 518, 536, 629, 699, 1006, 1038, 1518, 1727
GsuI CTGGAG 1 cut(s) 1882
HaeIII GGCC 4 cut(s) 230, 308, 314, 1632
HapII CCGG 6 cut(s) 282, 316, 375, 443, 573, 1633
HindIII AAGCTT 1 cut(s) 1229
HinfI GANTC 6 cut(s) 7, 1162, 1336, 1636, 1836, 1874
HpaII CCGG 6 cut(s) 282, 316, 375, 443, 573, 1633
HphI GGTGA 5 cut(s) 67, 457, 602, 695, 725
Hpy166II GTNNAC 5 cut(s) 71, 160, 656, 1705, 1831
Hpy188I TCNGA 7 cut(s) 200, 210, 438, 678, 792, 1024, 1242
Hpy188III TCNNGA 9 cut(s) 619, 845, 1067, 1133, 1351, 1407, 1546, 1742, 1895
Hpy8I GTNNAC 5 cut(s) 71, 160, 656, 1705, 1831
Hpy99I CGWCG 2 cut(s) 332, 405
HpyAV CCTTC 6 cut(s) 174, 792, 844, 1247, 1622, 1802
HpyCH4III ACNGT 4 cut(s) 866, 1077, 1360, 1828
HpyCH4IV ACGT 5 cut(s) 156, 348, 381, 770, 1678
HpyF10VI GCNNNNNNNGC 3 cut(s) 227, 1523, 1726
HpyF3I CTNAG 5 cut(s) 339, 650, 1096, 1239, 1292
HpySE526I ACGT 5 cut(s) 156, 348, 381, 770, 1678
Ksp22I TGATCA 5 cut(s) 433, 474, 826, 999, 1749
KspI CCGCGG 1 cut(s) 394
LmnI GCTCC 1 cut(s) 58
Lsp1109I GCAGC 4 cut(s) 685, 1024, 1504, 1738
LweI GCATC 8 cut(s) 107, 429, 517, 748, 1140, 1233, 1330, 1511
MaeI CTAG 4 cut(s) 945, 1127, 1250, 1325
MaeII ACGT 5 cut(s) 156, 348, 381, 770, 1678
MaeIII GTNAC 2 cut(s) 259, 568
MboII GAAGA 8 cut(s) 56, 736, 758, 818, 1043, 1366, 1561, 1637
MflI RGATCY 3 cut(s) 183, 1315, 1885
MhlI GDGCHC 3 cut(s) 55, 658, 1609
MlsI TGGCCA 1 cut(s) 308
MluCI AATT 7 cut(s) 268, 361, 898, 1437, 1640, 1661, 1772
MluNI TGGCCA 1 cut(s) 308
MlyI GAGTC 3 cut(s) 1171, 1645, 1868
Mox20I TGGCCA 1 cut(s) 308
Mph1103I ATGCAT 2 cut(s) 1504, 1603
MroXI GAANNNNTTC 1 cut(s) 323
MscI TGGCCA 1 cut(s) 308
MseI TTAA 4 cut(s) 1121, 1227, 1595, 1644
MslI CAYNNNNRTG 1 cut(s) 1078
Msp20I TGGCCA 1 cut(s) 308
MspA1I CMGCKG 3 cut(s) 393, 1005, 1345
MspI CCGG 6 cut(s) 282, 316, 375, 443, 573, 1633
MspR9I CCNGG 9 cut(s) 223, 283, 316, 358, 376, 574, 1109, 1477, 1861
Mva1269I GAATGC 5 cut(s) 565, 630, 1062, 1090, 1486
MvaI CCWGG 5 cut(s) 223, 358, 1109, 1477, 1861
MvnI CGCG 1 cut(s) 393
MwoI GCNNNNNNNGC 3 cut(s) 227, 1523, 1726
NciI CCSGG 4 cut(s) 283, 316, 376, 574
NdeI CATATG 1 cut(s) 1017
NlaIV GGNNCC 1 cut(s) 818
NmeAIII GCCGAG 1 cut(s) 323
NsiI ATGCAT 2 cut(s) 1504, 1603
NspI RCATGY 2 cut(s) 1333, 1605
PaeI GCATGC 1 cut(s) 1333
PagI TCATGA 4 cut(s) 1132, 1350, 1545, 1894
PceI AGGCCT 1 cut(s) 230
PctI GAATGC 5 cut(s) 565, 630, 1062, 1090, 1486
PdmI GAANNNNTTC 1 cut(s) 323
PfeI GAWTC 3 cut(s) 7, 1336, 1836
PfoI TCCNGGA 2 cut(s) 356, 1475
PkrI GCNGC 9 cut(s) 392, 519, 537, 630, 700, 1007, 1039, 1519, 1728
PleI GAGTC 3 cut(s) 1170, 1644, 1868
PpsI GAGTC 3 cut(s) 1170, 1644, 1868
Ppu21I YACGTR 1 cut(s) 1679
PsiI TTATAA 2 cut(s) 765, 1394
Psp124BI GAGCTC 1 cut(s) 55
Psp6I CCWGG 5 cut(s) 221, 356, 1107, 1475, 1859
PspEI GGTNACC 1 cut(s) 568
PspGI CCWGG 5 cut(s) 221, 356, 1107, 1475, 1859
PspN4I GGNNCC 1 cut(s) 818
PspPI GGNCC 1 cut(s) 313
PstI CTGCAG 1 cut(s) 1522
PsuI RGATCY 3 cut(s) 183, 1315, 1885
PvuII CAGCTG 1 cut(s) 1345
RsaI GTAC 2 cut(s) 380, 1303
RsaNI GTAC 2 cut(s) 379, 1302
RseI CAYNNNNRTG 1 cut(s) 1078
SacI GAGCTC 1 cut(s) 55
SacII CCGCGG 1 cut(s) 394
SaqAI TTAA 4 cut(s) 1121, 1227, 1595, 1644
SatI GCNGC 9 cut(s) 391, 518, 536, 629, 699, 1006, 1038, 1518, 1727
Sau96I GGNCC 1 cut(s) 313
ScaI AGTACT 1 cut(s) 1303
SchI GAGTC 3 cut(s) 1171, 1645, 1868
ScrFI CCNGG 9 cut(s) 223, 283, 316, 358, 376, 574, 1109, 1477, 1861
SduI GDGCHC 3 cut(s) 55, 658, 1609
SfaNI GCATC 8 cut(s) 107, 429, 517, 748, 1140, 1233, 1330, 1511
SfcI CTRYAG 3 cut(s) 104, 581, 1518
Sfr303I CCGCGG 1 cut(s) 394
SgrBI CCGCGG 1 cut(s) 394
SmiI ATTTAAAT 1 cut(s) 1645
SmiMI CAYNNNNRTG 1 cut(s) 1078
SmlI CTYRAG 2 cut(s) 1730, 1876
SmoI CTYRAG 2 cut(s) 1730, 1876
SphI GCATGC 1 cut(s) 1333
Sse9I AATT 7 cut(s) 268, 361, 898, 1437, 1640, 1661, 1772
SseBI AGGCCT 1 cut(s) 230
SsiI CCGC 7 cut(s) 391, 393, 517, 536, 629, 1005, 1190
SspI AATATT 1 cut(s) 934
SspMI CTAG 4 cut(s) 945, 1127, 1250, 1325
SstI GAGCTC 1 cut(s) 55
StuI AGGCCT 1 cut(s) 230
StyD4I CCNGG 9 cut(s) 221, 281, 314, 356, 374, 572, 1107, 1475, 1859
StyI CCWWGG 1 cut(s) 309
SwaI ATTTAAAT 1 cut(s) 1645
TaaI ACNGT 4 cut(s) 866, 1077, 1360, 1828
TaiI ACGT 5 cut(s) 159, 351, 384, 773, 1681
TaqI TCGA 3 cut(s) 327, 618, 1839
TasI AATT 7 cut(s) 268, 361, 898, 1437, 1640, 1661, 1772
TatI WGTACW 1 cut(s) 1301
TauI GCSGC 5 cut(s) 393, 520, 538, 631, 1008
TfiI GAWTC 3 cut(s) 7, 1336, 1836
Tru1I TTAA 4 cut(s) 1121, 1227, 1595, 1644
Tru9I TTAA 4 cut(s) 1121, 1227, 1595, 1644
TscAI CASTG 4 cut(s) 177, 484, 871, 1080
TseI GCWGC 4 cut(s) 698, 1037, 1517, 1726
TspDTI ATGAA 9 cut(s) 19, 257, 708, 1004, 1328, 1367, 1466, 1534, 1562
TspGWI ACGGA 1 cut(s) 265
TspRI CASTG 4 cut(s) 177, 484, 871, 1080
VneI GTGCAC 1 cut(s) 654
XapI RAATTY 5 cut(s) 268, 361, 898, 1661, 1772
XceI RCATGY 2 cut(s) 1333, 1605
XmiI GTMKAC 2 cut(s) 70, 159
XmnI GAANNNNTTC 1 cut(s) 323
XspI CTAG 4 cut(s) 945, 1127, 1250, 1325
ZrmI AGTACT 1 cut(s) 1303
Zsp2I ATGCAT 2 cut(s) 1504, 1603
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.