Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6B

Orthogroup ID

OG0003199

Physical Location & Seq

Genomic Coordinates Forward (+)

15930506 .. 15939519

Gene Structure 9014 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6BG102900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1758 bp

ATGATTAGTGGGTGTGCCAAGAATGGGAGGATGGGGGAAGCATTGCGGCTTTTCGAGTCTATGCCTGAGAGGAGTGTTGTGTCTTGGAATGCAATGGTTACTGGGTTTTTGCAGAATGGTGATGTTGTGAGTGCAGTTGAGTTTTTTGAGAGAATGCCACAGCGGGATGGAGCTTCTGTTAGTGCACTTGTGTCGGGGCTTATTCAAAACGGCGAGCTGGATGAAGCTGCGAGGATTGTTGTTCAATGTGGGGATAGGGGTGAGGGTGTGGAGGTTATGGTCAGAGAGGAAGGGTTGAAGAAGCTCGTCACATTTTTGATTGAATTCCATTTTGTCATGATAAGGGGAAAGAGGGGCGGTAGGAGGTTTGAGAGAAAAGTCATAACATGGAATTCCATGATTTTGTGCCATGTGAAACTAGGAAATGTTGTTTCTGCTAGGAAACTTTTTGACCAAATGATAGAACGAGATACCTTTTCTTGGAATACCATGATCAGTGGCTACGTTCATATGTCAGATATGGAAGAGGCGTCCAAGCTCTTTCTGGAAATGCCAAATCCTGATACACTGTCATGGAATTCAATGATCTTAGGGTATGCCCAGGTTGGTGGATGCCACAAGAGTCTTGTCTCTTTGAACTCCGTGATAGCAGGATATGAGAAAAATGAGAACTTCATAGGAGCAGTTAAGCTCTTTGCTCAGATGCAACTCAAAGGAGAGAAACCTGATAGACACACTTTATCTTCAGTTCTTGATTTGCCAATAAACAATGCCCTTGTAACTATGTATTCACGATGTGGTGCGATAGAGGAGGTGCAAACAATTTTTGATGAGATGAAATGGGAGAAAAATGTCAGCTCGTGGAATGCAATGATCGGATGCTACGCATCTCATGGTTTTGCTGCAGAGGCTTTAGAACTTTTCGCTTTGATGAAGAGGTTAAATGTGCGACCTACTTATATAACATTTATTGCAGTGTTGAATGCGTGTGCTCATGCAGGATTAGCTGAAGAAGGGAGGAGGCAATTTAAATCCATGATTAGTGACTTTGGTATTGAGCCACGTATTGAACACTATGCATCCCTTGTGGACATAATTGGTTGGCATGGACAGCTTGAGGAGGCTATGGATATGATCAATAGCATGCCATTTGAAGCAGACAAGCCTGTGTGGGGAGCATTGTTAGGTGCCTGTAGAGTGCATAACAATGCAGAGTCGGCAAAAGTTGTAGCTGAAACATTAATGAGACTTGAATCCGAATGTTCAGCTCCATATGTGTTGTTATACAATATGTATGCTGATGCTGGGCAATGTGATGAAGCAGCAGCTGTGAGACTGCTGATGGATAATAACAAGATAATTAAGCAAAAAGGCTATAGTCAGGTTTTCCTGACACCACAAGACATCAAAACTCTACCATTACTTAGACCAGTAAAAGGCATGGTAGACCAAGGAAATTCATCTTGTACTAAGCACCTCGGTCCTTTGGATCATTGCCAAGAGAATTTAGGTAAGCACAATCCAAGCTCTAAATCTGATTACTCAAAGAGGTTCAAAAAGAGGAAGAAGATTATGAAGATAACCGCTGAAGTATCTGCTGAACAGTTCAGATCTGAGTACCCCCATTTTATAGAAAAAATTAGTAGACATGGTCCAGAGAGGATTCGACCTCAGGTCTTGAAGCATCTTAGGAAAGACCTATCTAGCAAGGCAACTTTGAGCTCGACCGTCCATGTCTTCAGTGTTCATGGAATGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016553 GO:0016554 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR

Protein Analysis

585

Amino Acids

65.64

Weight (kDa)

8.15

Isoelectric Point (pI)

39.73

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR	PF01535	1 - 25	1e-05	PPR repeat
PPR	PF01535	27 - 55	9e-06	PPR repeat
PPR	PF01535	128 - 156	2.4e-06	PPR repeat
PPR_2	PF13041	157 - 200	5.4e-08	PPR repeat family
PPR	PF01535	159 - 184	4.5e-07	PPR repeat
PPR_2	PF13041	208 - 252	3.9e-07	PPR repeat family
PPR_2	PF13041	283 - 332	2.7e-09	PPR repeat family
PPR	PF01535	287 - 316	6e-07	PPR repeat
E_motif	PF20431	401 - 462	2.6e-08	E motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

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Orthologous Genes (Group: OG0003199)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G62260
fragaria_vesca	FvH4_2g07250
malus_domestica	MD10G1129300.v1.1
prunus_persica	Prupe.8G170100_v2.0.a1 Prupe.8G170100_v2.0.a1
pyrus_communis	pycom06g17110 pycom10g11090
rosa_chinensis	RchiOBHm_Chr6g0259851 RchiOBHm_Chr6g0279101
rosa_laevigata	RLG00000013168 RLG00000014504
rosa_multiflora	Rmu_co8522155.1_g000002 Rmu_sc0002080.1_g000004 Rmu_sc0009049.1_g000004 Rmu_sc0037609.1_g000001 Rmu_sc0037609.1_g000002 Rmu_sc0037609.1_g000003
rosa_roxburghii	Rroxscaffold_7G00189130 Rroxscaffold_7G00207040 Rroxscaffold_7G00207050 Rroxscaffold_7G00207060 Rroxscaffold_7G00207180 Rroxscaffold_7G00207190 Rroxscaffold_7G00207200
rosa_rugosa	Rorug05G0590700 Rorug05G0590800 Rorug06G0122200
rosa_samantha	Rh6AG107400 Rh6AG230900 Rh6BG102900 Rh6BG235800 Rh6DG090200 Rh6DG229500
rosa_wichuraiana	Rw0G019930 Rw0G021150 Rw6G009260 Rw6G020220

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	1187
AccI	GTMKAC	2 cut(s)	1446, 1645
AciI	CCGC	4 cut(s)	46, 163, 357, 1584
AclWI	GGATC	1 cut(s)	1497
AcsI	RAATTY	5 cut(s)	323, 391, 577, 1456, 1504
AcuI	CTGAAG	4 cut(s)	729, 1029, 1608, 1723
AcyI	GRCGYC	1 cut(s)	530
AdeI	CACNNNGTG	1 cut(s)	797
AfaI	GTAC	2 cut(s)	1468, 1619
AfiI	CCNNNNNNNGG	4 cut(s)	24, 480, 1172, 1436
AhdI	GACNNNNNGTC	1 cut(s)	1673
AjnI	CCWGG	1 cut(s)	600
Alw21I	GWGCWC	3 cut(s)	187, 994, 1724
Alw26I	GTCTC	3 cut(s)	634, 1240, 1327
Alw44I	GTGCAC	1 cut(s)	183
AlwI	GGATC	1 cut(s)	1497
AlwNI	CAGNNNCTG	1 cut(s)	1328
ApaLI	GTGCAC	1 cut(s)	183
ApeKI	GCWGC	4 cut(s)	227, 902, 1322, 1325
ApoI	RAATTY	5 cut(s)	323, 391, 577, 1456, 1504
AseI	ATTAAT	1 cut(s)	1241
AspS9I	GGNCC	2 cut(s)	1481, 1652
AsuHPI	GGTGA	2 cut(s)	131, 272
AvaII	GGWCC	2 cut(s)	1481, 1652
AxyI	CCTNAGG	1 cut(s)	1671
BaeGI	GKGCMC	1 cut(s)	187
BanI	GGYRCC	1 cut(s)	1187
BanII	GRGCYC	1 cut(s)	1724
BauI	CACGAG	1 cut(s)	859
BbsI	GAAGAC	1 cut(s)	1729
Bbv12I	GWGCWC	3 cut(s)	187, 994, 1724
BbvI	GCAGC	4 cut(s)	214, 889, 1334, 1337
BccI	CCATC	3 cut(s)	25, 161, 1336
BceAI	ACGGC	1 cut(s)	226
BcgI	CGANNNNNNTGC	2 cut(s)	174, 208
BciT130I	CCWGG	1 cut(s)	602
BclI	TGATCA	2 cut(s)	492, 1134
BcoDI	GTCTC	3 cut(s)	634, 1240, 1327
BfaI	CTAG	3 cut(s)	419, 438, 1704
BfmI	CTRYAG	3 cut(s)	903, 1192, 1375
BglII	AGATCT	1 cut(s)	1610
BisI	GCNGC	5 cut(s)	47, 228, 903, 1323, 1326
BlsI	GCNGC	5 cut(s)	48, 229, 904, 1324, 1327
Bme1390I	CCNGG	1 cut(s)	602
Bme18I	GGWCC	2 cut(s)	1481, 1652
BmeRI	GACNNNNNGTC	1 cut(s)	1673
BmgT120I	GGNCC	2 cut(s)	1481, 1652
BmiI	GGNNCC	1 cut(s)	1189
BmrFI	CCNGG	1 cut(s)	602
BmrI	ACTGGG	1 cut(s)	111
BmsI	GCATC	7 cut(s)	602, 693, 869, 896, 1088, 1291, 1693
BmuI	ACTGGG	1 cut(s)	111
BpiI	GAAGAC	1 cut(s)	1729
BpuEI	CTTGAG	1 cut(s)	1136
BsaAI	YACGTR	1 cut(s)	1064
BsaHI	GRCGYC	1 cut(s)	530
BsaJI	CCNNGG	3 cut(s)	600, 1450, 1477
BsaXI	ACNNNNNCTCC	2 cut(s)	162, 192
Bsc4I	CCNNNNNNNGG	4 cut(s)	24, 480, 1172, 1436
Bse1I	ACTGG	2 cut(s)	106, 1430
Bse21I	CCTNAGG	1 cut(s)	1671
Bse3DI	GCAATG	5 cut(s)	41, 99, 876, 1316, 1492
BseBI	CCWGG	1 cut(s)	602
BseDI	CCNNGG	3 cut(s)	600, 1450, 1477
BseGI	GGATG	6 cut(s)	36, 172, 226, 617, 884, 1079
BseLI	CCNNNNNNNGG	4 cut(s)	24, 480, 1172, 1436
BseMI	GCAATG	5 cut(s)	41, 99, 876, 1316, 1492
BseMII	CTCAG	4 cut(s)	57, 713, 1605, 1685
BseNI	ACTGG	2 cut(s)	106, 1430
BseRI	GAGGAG	4 cut(s)	85, 824, 1033, 1133
BseSI	GKGCMC	1 cut(s)	187
BseXI	GCAGC	4 cut(s)	214, 889, 1334, 1337
BseYI	CCCAGC	1 cut(s)	1304
BsgI	GTGCAG	1 cut(s)	153
Bsh1285I	CGRYCG	1 cut(s)	1728
BshNI	GGYRCC	1 cut(s)	1187
BsiEI	CGRYCG	1 cut(s)	1728
BsiHKAI	GWGCWC	3 cut(s)	187, 994, 1724
BslI	CCNNNNNNNGG	4 cut(s)	24, 480, 1172, 1436
BsmAI	GTCTC	3 cut(s)	634, 1240, 1327
BsmI	GAATGC	4 cut(s)	94, 159, 871, 988
Bsp1286I	GDGCHC	3 cut(s)	187, 994, 1724
Bsp143I	GATC	6 cut(s)	492, 585, 873, 1134, 1489, 1610
BspACI	CCGC	4 cut(s)	46, 163, 357, 1584
BspCNI	CTCAG	4 cut(s)	58, 712, 1606, 1684
BspHI	TCATGA	1 cut(s)	336
BspLI	GGNNCC	1 cut(s)	1189
BspMAI	CTGCAG	1 cut(s)	907
BspPI	GGATC	1 cut(s)	1497
BspT107I	GGYRCC	1 cut(s)	1187
BsrDI	GCAATG	5 cut(s)	41, 99, 876, 1316, 1492
BsrI	ACTGG	2 cut(s)	106, 1430
BssECI	CCNNGG	3 cut(s)	600, 1450, 1477
BssMI	GATC	6 cut(s)	492, 585, 873, 1134, 1489, 1610
BssNI	GRCGYC	1 cut(s)	530
BssSI	CACGAG	1 cut(s)	859
BssT1I	CCWWGG	1 cut(s)	1450
Bst2BI	CACGAG	1 cut(s)	859
Bst2UI	CCWGG	1 cut(s)	602
Bst4CI	ACNGT	3 cut(s)	570, 1605, 1729
Bst6I	CTCTTC	2 cut(s)	519, 929
BstACI	GRCGYC	1 cut(s)	530
BstBAI	YACGTR	1 cut(s)	1064
BstC8I	GCNNGC	2 cut(s)	215, 1145
BstDEI	CTNAG	8 cut(s)	66, 589, 699, 1424, 1470, 1614, 1671, 1688
BstF5I	GGATG	6 cut(s)	36, 172, 226, 617, 884, 1079
BstKTI	GATC	6 cut(s)	495, 588, 876, 1137, 1492, 1613
BstMAI	GTCTC	3 cut(s)	634, 1240, 1327
BstMBI	GATC	6 cut(s)	492, 585, 873, 1134, 1489, 1610
BstMCI	CGRYCG	1 cut(s)	1728
BstMWI	GCNNNNNNNGC	4 cut(s)	908, 1004, 1111, 1217
BstNI	CCWGG	1 cut(s)	602
BstNSI	RCATGY	1 cut(s)	1147
BstSCI	CCNGG	1 cut(s)	600
BstSFI	CTRYAG	3 cut(s)	903, 1192, 1375
BstSLI	GKGCMC	1 cut(s)	187
BstV1I	GCAGC	4 cut(s)	214, 889, 1334, 1337
BstV2I	GAAGAC	1 cut(s)	1729
BstX2I	RGATCY	1 cut(s)	1610
BstXI	CCANNNNNNTGG	1 cut(s)	608
BstYI	RGATCY	1 cut(s)	1610
Bsu36I	CCTNAGG	1 cut(s)	1671
BtsCI	GGATG	6 cut(s)	36, 172, 226, 617, 884, 1079
BtsI	GCAGTG	1 cut(s)	981
BtsIMutI	CAGTG	4 cut(s)	502, 566, 981, 1747
Cac8I	GCNNGC	2 cut(s)	215, 1145
CaiI	CAGNNNCTG	1 cut(s)	1328
CciI	TCATGA	1 cut(s)	336
Cfr13I	GGNCC	2 cut(s)	1481, 1652
CseI	GACGC	1 cut(s)	519
Csp6I	GTAC	2 cut(s)	1467, 1618
CviQI	GTAC	2 cut(s)	1467, 1618
DdeI	CTNAG	8 cut(s)	66, 589, 699, 1424, 1470, 1614, 1671, 1688
DpnI	GATC	6 cut(s)	494, 587, 875, 1136, 1491, 1612
DpnII	GATC	6 cut(s)	492, 585, 873, 1134, 1489, 1610
DraI	TTTAAA	1 cut(s)	1030
DraIII	CACNNNGTG	1 cut(s)	797
DriI	GACNNNNNGTC	1 cut(s)	1673
Eam1104I	CTCTTC	2 cut(s)	519, 929
Eam1105I	GACNNNNNGTC	1 cut(s)	1673
EarI	CTCTTC	2 cut(s)	519, 929
Ecl136II	GAGCTC	1 cut(s)	1722
Eco130I	CCWWGG	1 cut(s)	1450
Eco24I	GRGCYC	1 cut(s)	1724
Eco47I	GGWCC	2 cut(s)	1481, 1652
Eco53kI	GAGCTC	1 cut(s)	1722
Eco57I	CTGAAG	4 cut(s)	729, 1029, 1608, 1723
Eco81I	CCTNAGG	1 cut(s)	1671
EcoICRI	GAGCTC	1 cut(s)	1722
EcoRI	GAATTC	3 cut(s)	323, 391, 577
EcoRII	CCWGG	1 cut(s)	600
EcoT14I	CCWWGG	1 cut(s)	1450
EcoT22I	ATGCAT	1 cut(s)	1081
EcoT38I	GRGCYC	1 cut(s)	1724
ErhI	CCWWGG	1 cut(s)	1450
FauI	CCCGC	1 cut(s)	156
FauNDI	CATATG	2 cut(s)	510, 1273
FbaI	TGATCA	2 cut(s)	492, 1134
FblI	GTMKAC	2 cut(s)	1446, 1645
Fnu4HI	GCNGC	5 cut(s)	47, 228, 903, 1323, 1326
FokI	GGATG	6 cut(s)	43, 179, 233, 624, 891, 1066
FriOI	GRGCYC	1 cut(s)	1724
Fsp4HI	GCNGC	5 cut(s)	47, 228, 903, 1323, 1326
FspBI	CTAG	3 cut(s)	419, 438, 1704
GluI	GCNGC	5 cut(s)	47, 228, 903, 1323, 1326
GsaI	CCCAGC	1 cut(s)	1308
HgaI	GACGC	1 cut(s)	519
Hin1I	GRCGYC	1 cut(s)	530
HinfI	GANTC	5 cut(s)	56, 622, 1214, 1253, 1663
HphI	GGTGA	2 cut(s)	131, 272
Hpy166II	GTNNAC	4 cut(s)	185, 1090, 1447, 1646
Hpy188I	TCNGA	8 cut(s)	284, 517, 702, 878, 1258, 1537, 1610, 1615
Hpy188III	TCNNGA	8 cut(s)	337, 545, 560, 752, 792, 1390, 1655, 1678
Hpy8I	GTNNAC	4 cut(s)	185, 1090, 1447, 1646
HpyAV	CCTTC	2 cut(s)	284, 1007
HpyCH4III	ACNGT	3 cut(s)	570, 1605, 1729
HpyCH4IV	ACGT	2 cut(s)	504, 1063
HpyF10VI	GCNNNNNNNGC	4 cut(s)	908, 1004, 1111, 1217
HpyF3I	CTNAG	8 cut(s)	66, 589, 699, 1424, 1470, 1614, 1671, 1688
HpySE526I	ACGT	2 cut(s)	504, 1063
Hsp92I	GRCGYC	1 cut(s)	530
Ksp22I	TGATCA	2 cut(s)	492, 1134
Kzo9I	GATC	6 cut(s)	492, 585, 873, 1134, 1489, 1610
LmnI	GCTCC	4 cut(s)	170, 680, 1175, 1273
Lsp1109I	GCAGC	4 cut(s)	214, 889, 1334, 1337
LweI	GCATC	7 cut(s)	602, 693, 869, 896, 1088, 1291, 1693
MaeI	CTAG	3 cut(s)	419, 438, 1704
MaeII	ACGT	2 cut(s)	504, 1063
MaeIII	GTNAC	4 cut(s)	97, 307, 778, 1043
MalI	GATC	6 cut(s)	494, 587, 875, 1136, 1491, 1612
MboI	GATC	6 cut(s)	492, 585, 873, 1134, 1489, 1610
MboII	GAAGA	9 cut(s)	310, 536, 735, 946, 1022, 1576, 1579, 1588, 1729
MflI	RGATCY	1 cut(s)	1610
MhlI	GDGCHC	3 cut(s)	187, 994, 1724
MlyI	GAGTC	3 cut(s)	65, 631, 1223
Mph1103I	ATGCAT	1 cut(s)	1081
MseI	TTAA	5 cut(s)	687, 941, 1029, 1241, 1362
MslI	CAYNNNNRTG	2 cut(s)	571, 1206
MspA1I	CMGCKG	3 cut(s)	163, 1328, 1586
MspR9I	CCNGG	1 cut(s)	602
Mva1269I	GAATGC	4 cut(s)	94, 159, 871, 988
MvaI	CCWGG	1 cut(s)	602
MwoI	GCNNNNNNNGC	4 cut(s)	908, 1004, 1111, 1217
NdeI	CATATG	2 cut(s)	510, 1273
NdeII	GATC	6 cut(s)	492, 585, 873, 1134, 1489, 1610
NlaIV	GGNNCC	1 cut(s)	1189
NmuCI	GTSAC	2 cut(s)	307, 1043
NsiI	ATGCAT	1 cut(s)	1081
NspI	RCATGY	1 cut(s)	1147
PaeI	GCATGC	1 cut(s)	1147
PagI	TCATGA	1 cut(s)	336
PctI	GAATGC	4 cut(s)	94, 159, 871, 988
PfeI	GAWTC	2 cut(s)	1253, 1663
PflFI	GACNNNGTC	1 cut(s)	1650
PkrI	GCNGC	5 cut(s)	48, 229, 904, 1324, 1327
PleI	GAGTC	3 cut(s)	64, 630, 1222
PpsI	GAGTC	3 cut(s)	64, 630, 1222
Ppu21I	YACGTR	1 cut(s)	1064
PshBI	ATTAAT	1 cut(s)	1241
Psp124BI	GAGCTC	1 cut(s)	1724
Psp6I	CCWGG	1 cut(s)	600
PspFI	CCCAGC	1 cut(s)	1304
PspGI	CCWGG	1 cut(s)	600
PspN4I	GGNNCC	1 cut(s)	1189
PspPI	GGNCC	2 cut(s)	1481, 1652
PstI	CTGCAG	1 cut(s)	907
PstNI	CAGNNNCTG	1 cut(s)	1328
PsuI	RGATCY	1 cut(s)	1610
PsyI	GACNNNGTC	1 cut(s)	1650
PvuII	CAGCTG	1 cut(s)	1328
RsaI	GTAC	2 cut(s)	1468, 1619
RsaNI	GTAC	2 cut(s)	1467, 1618
RseI	CAYNNNNRTG	2 cut(s)	571, 1206
SacI	GAGCTC	1 cut(s)	1724
SaqAI	TTAA	5 cut(s)	687, 941, 1029, 1241, 1362
SatI	GCNGC	5 cut(s)	47, 228, 903, 1323, 1326
Sau3AI	GATC	6 cut(s)	492, 585, 873, 1134, 1489, 1610
Sau96I	GGNCC	2 cut(s)	1481, 1652
SchI	GAGTC	3 cut(s)	65, 631, 1223
ScrFI	CCNGG	1 cut(s)	602
SduI	GDGCHC	3 cut(s)	187, 994, 1724
SfaNI	GCATC	7 cut(s)	602, 693, 869, 896, 1088, 1291, 1693
SfcI	CTRYAG	3 cut(s)	903, 1192, 1375
SinI	GGWCC	2 cut(s)	1481, 1652
SmiI	ATTTAAAT	1 cut(s)	1030
SmiMI	CAYNNNNRTG	2 cut(s)	571, 1206
SmlI	CTYRAG	1 cut(s)	1115
SmoI	CTYRAG	1 cut(s)	1115
SphI	GCATGC	1 cut(s)	1147
SsiI	CCGC	4 cut(s)	46, 163, 357, 1584
SspMI	CTAG	3 cut(s)	419, 438, 1704
SstI	GAGCTC	1 cut(s)	1724
StyD4I	CCNGG	1 cut(s)	600
StyI	CCWWGG	1 cut(s)	1450
SwaI	ATTTAAAT	1 cut(s)	1030
TaaI	ACNGT	3 cut(s)	570, 1605, 1729
TaiI	ACGT	2 cut(s)	507, 1066
TaqI	TCGA	3 cut(s)	54, 1666, 1724
TaqII	GACCGA	1 cut(s)	1469
TatI	WGTACW	1 cut(s)	1466
TauI	GCSGC	1 cut(s)	49
TfiI	GAWTC	2 cut(s)	1253, 1663
Tru1I	TTAA	5 cut(s)	687, 941, 1029, 1241, 1362
Tru9I	TTAA	5 cut(s)	687, 941, 1029, 1241, 1362
TscAI	CASTG	4 cut(s)	502, 573, 981, 1747
TseFI	GTSAC	2 cut(s)	307, 1043
TseI	GCWGC	4 cut(s)	227, 902, 1322, 1325
Tsp45I	GTSAC	2 cut(s)	307, 1043
TspDTI	ATGAA	9 cut(s)	237, 497, 664, 851, 947, 1332, 1449, 1589, 1736
TspGWI	ACGGA	1 cut(s)	631
TspRI	CASTG	4 cut(s)	502, 573, 981, 1747
Tth111I	GACNNNGTC	1 cut(s)	1650
VneI	GTGCAC	1 cut(s)	183
VpaK11BI	GGWCC	2 cut(s)	1481, 1652
VspI	ATTAAT	1 cut(s)	1241
XapI	RAATTY	5 cut(s)	323, 391, 577, 1456, 1504
XceI	RCATGY	1 cut(s)	1147
XcmI	CCANNNNNNNNNTGG	1 cut(s)	541
XmiI	GTMKAC	2 cut(s)	1446, 1645
XspI	CTAG	3 cut(s)	419, 438, 1704
Zsp2I	ATGCAT	1 cut(s)	1081

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.