RLG00000003641

Carboxylesterase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr1
OG0001599
Physical Location & Seq
Forward (+)
51167307 .. 51168298
992 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000003641

Sequence Viewer

Length: 738 bp
ATGGGTTCCCAACCTCACGTTGTTGATGACTGCGTCAATCTCCGTATCTTCAGCGACGGTTCAATCTGGCGTCGCCCTTTCGAAGACATTAACTTCGGCAGTATTCGATTCAACGATGACAGCTCCGTCGTCTCTAAAGATGTTACTTACGACCAAAAGCTCAACCTCTCCCTCCGTTTATACAAACCAAGATTAACAAACCCTACTTCCTCGAGCGTCAAGCTCCCGGTGATGCTTTACTTTCACGGGGGTGGTTTTTGCGTCGGATCACGTGTCTGGCCCAACTTCCACAACTCATGTGTCCGACTGGCGGCCGGGCTCAACGCTCTTGTGGTGGCACCGGACCACCGGCTTGCGCCTGAGGATAAGCTCCCGGATGCGCTGGAGGATGCGGCGAGTGCGGTGGAGTGGCTGCAAAGGGAGGCCTTGATGAGTGAGAATGGTGGTGATTGTGATGCATGGATACGTGGTGGTGTCGCTGACTTTGACAGGGTTTTTATAGTCGGTGACTCTTCCGGTGGCACCATAGCTCACCACCTGGCGGTTTCGCTGGGAAGTGGATCCGTCAAAGCGGCGCCGCTTCGGGTACGGGGGTACGTGATGTTTTCGCCATTTTTTGGTGCAGTGGAGTGGACAAAATCAGAGGTGGAGCCTCACGAACCATTTTTGATACTGGATTTAATTGAAAGGTATCTGTTTTCAAATTTTCATCAAACTATTTCGCAAAGCTATCTCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003824 GO:0008150 GO:0008152 GO:0009056 GO:0016787
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Abhydrolase_3

Protein Analysis

246

Amino Acids

27.15

Weight (kDa)

5.58

Isoelectric Point (pI)

38.88

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
COesterase PF00135 56 - 183 2.1e-06 Carboxylesterase family
BD-FAE PF20434 67 - 183 9e-09 BD-FAE
Abhydrolase_3 PF07859 78 - 229 2e-32 alpha/beta hydrolase fold
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 125
AccB1I GGYRCC 3 cut(s) 337, 521, 574
AccB7I CCANNNNNTGG 1 cut(s) 617
AciI CCGC 6 cut(s) 311, 392, 401, 542, 572, 578
AclWI GGATC 3 cut(s) 274, 555, 568
AcoI YGGCCR 1 cut(s) 312
AcsI RAATTY 1 cut(s) 703
AcuI CTGAAG 1 cut(s) 34
AcvI CACGTG 1 cut(s) 272
AcyI GRCGYC 2 cut(s) 70, 575
AfaI GTAC 2 cut(s) 588, 596
AfiI CCNNNNNNNGG 3 cut(s) 310, 541, 617
AflIII ACRYGT 1 cut(s) 271
AgsI TTSAA 4 cut(s) 63, 112, 686, 702
AjnI CCWGG 1 cut(s) 537
AleI CACNNNNGTG 1 cut(s) 249
AluBI AGCT 6 cut(s) 123, 160, 223, 370, 530, 729
AluI AGCT 6 cut(s) 123, 160, 223, 370, 530, 729
Alw26I GTCTC 1 cut(s) 136
AlwI GGATC 3 cut(s) 274, 555, 568
Ama87I CYCGRG 1 cut(s) 211
AoxI GGCC 3 cut(s) 278, 312, 423
ApeKI GCWGC 1 cut(s) 412
ApoI RAATTY 1 cut(s) 703
ArsI GACNNNNNNTTYG 2 cut(s) 77, 109
AspLEI GCGC 3 cut(s) 358, 382, 577
AspS9I GGNCC 2 cut(s) 279, 343
AsuC2I CCSGG 3 cut(s) 227, 316, 374
AsuHPI GGTGA 4 cut(s) 241, 458, 518, 524
AsuII TTCGAA 1 cut(s) 81
AvaI CYCGRG 1 cut(s) 211
AvaII GGWCC 1 cut(s) 343
AxyI CCTNAGG 1 cut(s) 360
BaeI ACNNNNGTAYC 2 cut(s) 578, 611
BamHI GGATCC 1 cut(s) 560
BanI GGYRCC 3 cut(s) 337, 521, 574
BanII GRGCYC 1 cut(s) 321
BbrPI CACGTG 1 cut(s) 272
BbsI GAAGAC 1 cut(s) 90
BbvI GCAGC 1 cut(s) 399
BciT130I CCWGG 1 cut(s) 539
BciVI GTATCC 1 cut(s) 456
BcnI CCSGG 3 cut(s) 227, 316, 374
BcoDI GTCTC 1 cut(s) 136
BfaI CTAG 1 cut(s) 736
BfoI RGCGCY 1 cut(s) 578
BfuI GTATCC 1 cut(s) 456
BisI GCNGC 5 cut(s) 312, 393, 413, 573, 578
BlsI GCNGC 5 cut(s) 313, 394, 414, 574, 579
Bme1390I CCNGG 4 cut(s) 227, 316, 374, 539
Bme18I GGWCC 1 cut(s) 343
BmeT110I CYCGRG 1 cut(s) 211
BmgT120I GGNCC 2 cut(s) 279, 343
BmiI GGNNCC 6 cut(s) 7, 339, 523, 562, 576, 651
BmrFI CCNGG 4 cut(s) 227, 316, 374, 539
BmsI GCATC 4 cut(s) 222, 367, 379, 445
BpiI GAAGAC 1 cut(s) 90
BpmI CTGGAG 1 cut(s) 404
Bpu14I TTCGAA 1 cut(s) 81
BpuMI CCSGG 3 cut(s) 227, 316, 374
BsaAI YACGTR 3 cut(s) 272, 467, 598
BsaHI GRCGYC 2 cut(s) 70, 575
BsaWI WCCGGW 2 cut(s) 340, 515
Bsc4I CCNNNNNNNGG 3 cut(s) 310, 541, 617
Bse118I RCCGGY 1 cut(s) 348
Bse1I ACTGG 2 cut(s) 312, 678
Bse21I CCTNAGG 1 cut(s) 360
BseBI CCWGG 1 cut(s) 539
BseGI GGATG 2 cut(s) 382, 394
BseLI CCNNNNNNNGG 3 cut(s) 310, 541, 617
BseMII CTCAG 1 cut(s) 351
BseNI ACTGG 2 cut(s) 312, 678
BseX3I CGGCCG 1 cut(s) 312
BseXI GCAGC 1 cut(s) 399
BseYI CCCAGC 1 cut(s) 550
BsgI GTGCAG 1 cut(s) 642
Bsh1285I CGRYCG 1 cut(s) 315
BshFI GGCC 3 cut(s) 280, 314, 425
BshNI GGYRCC 3 cut(s) 337, 521, 574
BsiEI CGRYCG 1 cut(s) 315
BsiHKCI CYCGRG 1 cut(s) 211
BsiSI CCGG 6 cut(s) 227, 315, 341, 349, 374, 516
BslI CCNNNNNNNGG 3 cut(s) 310, 541, 617
BsmAI GTCTC 1 cut(s) 136
BsmBI CGTCTC 1 cut(s) 136
BsnI GGCC 3 cut(s) 280, 314, 425
BsoBI CYCGRG 1 cut(s) 211
Bsp119I TTCGAA 1 cut(s) 81
Bsp1286I GDGCHC 1 cut(s) 321
Bsp143I GATC 2 cut(s) 266, 560
BspACI CCGC 6 cut(s) 311, 392, 401, 542, 572, 578
BspANI GGCC 3 cut(s) 280, 314, 425
BspCNI CTCAG 1 cut(s) 352
BspLI GGNNCC 6 cut(s) 7, 339, 523, 562, 576, 651
BspPI GGATC 3 cut(s) 274, 555, 568
BspT104I TTCGAA 1 cut(s) 81
BspT107I GGYRCC 3 cut(s) 337, 521, 574
BsrFI RCCGGY 1 cut(s) 348
BsrI ACTGG 2 cut(s) 312, 678
BssAI RCCGGY 1 cut(s) 348
BssMI GATC 2 cut(s) 266, 560
BssNI GRCGYC 2 cut(s) 70, 575
Bst2UI CCWGG 1 cut(s) 539
Bst4CI ACNGT 1 cut(s) 59
Bst6I CTCTTC 1 cut(s) 517
BstACI GRCGYC 2 cut(s) 70, 575
BstBAI YACGTR 3 cut(s) 272, 467, 598
BstBI TTCGAA 1 cut(s) 81
BstC8I GCNNGC 1 cut(s) 354
BstDEI CTNAG 1 cut(s) 360
BstF5I GGATG 2 cut(s) 382, 394
BstH2I RGCGCY 1 cut(s) 578
BstHHI GCGC 3 cut(s) 358, 382, 577
BstKTI GATC 2 cut(s) 269, 563
BstMAI GTCTC 1 cut(s) 136
BstMBI GATC 2 cut(s) 266, 560
BstMCI CGRYCG 1 cut(s) 315
BstMWI GCNNNNNNNGC 1 cut(s) 398
BstNI CCWGG 1 cut(s) 539
BstSCI CCNGG 4 cut(s) 225, 314, 372, 537
BstV1I GCAGC 1 cut(s) 399
BstV2I GAAGAC 1 cut(s) 90
BstX2I RGATCY 1 cut(s) 560
BstYI RGATCY 1 cut(s) 560
BstZI CGGCCG 1 cut(s) 312
Bsu36I CCTNAGG 1 cut(s) 360
BsuI GTATCC 1 cut(s) 456
BsuRI GGCC 3 cut(s) 280, 314, 425
BtsCI GGATG 2 cut(s) 382, 394
BtsI GCAGTG 1 cut(s) 630
BtsIMutI CAGTG 1 cut(s) 630
Cac8I GCNNGC 1 cut(s) 354
CfoI GCGC 3 cut(s) 358, 382, 577
Cfr10I RCCGGY 1 cut(s) 348
Cfr13I GGNCC 2 cut(s) 279, 343
CseI GACGC 4 cut(s) 22, 59, 205, 250
Csp6I GTAC 2 cut(s) 587, 595
CviAII CATG 2 cut(s) 297, 459
CviQI GTAC 2 cut(s) 587, 595
DdeI CTNAG 1 cut(s) 360
DinI GGCGCC 1 cut(s) 576
DpnI GATC 2 cut(s) 268, 562
DpnII GATC 2 cut(s) 266, 560
DrdI GACNNNNNNGTC 1 cut(s) 125
DseDI GACNNNNNNGTC 1 cut(s) 125
EaeI YGGCCR 1 cut(s) 312
EagI CGGCCG 1 cut(s) 312
Eam1104I CTCTTC 1 cut(s) 517
EarI CTCTTC 1 cut(s) 517
EclXI CGGCCG 1 cut(s) 312
Eco147I AGGCCT 1 cut(s) 425
Eco24I GRGCYC 1 cut(s) 321
Eco47I GGWCC 1 cut(s) 343
Eco52I CGGCCG 1 cut(s) 312
Eco57I CTGAAG 1 cut(s) 34
Eco72I CACGTG 1 cut(s) 272
Eco81I CCTNAGG 1 cut(s) 360
Eco88I CYCGRG 1 cut(s) 211
EcoRII CCWGG 1 cut(s) 537
EcoT22I ATGCAT 1 cut(s) 460
EcoT38I GRGCYC 1 cut(s) 321
EgeI GGCGCC 1 cut(s) 576
EheI GGCGCC 1 cut(s) 576
Esp3I CGTCTC 1 cut(s) 136
FaeI CATG 2 cut(s) 300, 462
FaiI YATR 5 cut(s) 181, 298, 460, 500, 527
FatI CATG 2 cut(s) 296, 458
Fnu4HI GCNGC 5 cut(s) 312, 393, 413, 573, 578
FokI GGATG 2 cut(s) 389, 401
FriOI GRGCYC 1 cut(s) 321
Fsp4HI GCNGC 5 cut(s) 312, 393, 413, 573, 578
FspBI CTAG 1 cut(s) 736
GlaI GCGC 3 cut(s) 357, 381, 576
GluI GCNGC 5 cut(s) 312, 393, 413, 573, 578
GsaI CCCAGC 1 cut(s) 554
GsuI CTGGAG 1 cut(s) 404
HaeII RGCGCY 1 cut(s) 578
HaeIII GGCC 3 cut(s) 280, 314, 425
HapII CCGG 6 cut(s) 227, 315, 341, 349, 374, 516
HgaI GACGC 4 cut(s) 22, 59, 205, 250
HhaI GCGC 3 cut(s) 358, 382, 577
Hin1I GRCGYC 2 cut(s) 70, 575
Hin1II CATG 2 cut(s) 300, 462
Hin6I GCGC 3 cut(s) 356, 380, 575
HinP1I GCGC 3 cut(s) 356, 380, 575
HinfI GANTC 2 cut(s) 108, 509
HpaII CCGG 6 cut(s) 227, 315, 341, 349, 374, 516
HphI GGTGA 4 cut(s) 241, 458, 518, 524
Hpy166II GTNNAC 1 cut(s) 633
Hpy188I TCNGA 3 cut(s) 266, 305, 643
Hpy188III TCNNGA 1 cut(s) 656
Hpy8I GTNNAC 1 cut(s) 633
Hpy99I CGWCG 4 cut(s) 59, 75, 131, 266
HpyCH4III ACNGT 1 cut(s) 59
HpyCH4IV ACGT 4 cut(s) 18, 271, 466, 597
HpyCH4V TGCA 3 cut(s) 415, 458, 623
HpyF10VI GCNNNNNNNGC 1 cut(s) 398
HpyF3I CTNAG 1 cut(s) 360
HpySE526I ACGT 4 cut(s) 18, 271, 466, 597
Hsp92I GRCGYC 2 cut(s) 70, 575
Hsp92II CATG 2 cut(s) 300, 462
HspAI GCGC 3 cut(s) 356, 380, 575
KasI GGCGCC 1 cut(s) 574
Kzo9I GATC 2 cut(s) 266, 560
LmnI GCTCC 4 cut(s) 128, 228, 375, 649
Lsp1109I GCAGC 1 cut(s) 399
LweI GCATC 4 cut(s) 222, 367, 379, 445
MaeI CTAG 1 cut(s) 736
MaeII ACGT 4 cut(s) 18, 271, 466, 597
MaeIII GTNAC 2 cut(s) 142, 506
MalI GATC 2 cut(s) 268, 562
MboI GATC 2 cut(s) 266, 560
MboII GAAGA 3 cut(s) 40, 95, 504
MflI RGATCY 1 cut(s) 560
MhlI GDGCHC 1 cut(s) 321
MluCI AATT 2 cut(s) 681, 703
Mly113I GGCGCC 1 cut(s) 575
MlyI GAGTC 1 cut(s) 503
MmeI TCCRAC 2 cut(s) 244, 328
MnlI CCTC 9 cut(s) 24, 176, 182, 220, 355, 379, 415, 637, 663
Mph1103I ATGCAT 1 cut(s) 460
MseI TTAA 3 cut(s) 90, 194, 680
MslI CAYNNNNRTG 1 cut(s) 249
MspI CCGG 6 cut(s) 227, 315, 341, 349, 374, 516
MspR9I CCNGG 4 cut(s) 227, 316, 374, 539
MvaI CCWGG 1 cut(s) 539
MwoI GCNNNNNNNGC 1 cut(s) 398
NarI GGCGCC 1 cut(s) 575
NciI CCSGG 3 cut(s) 227, 316, 374
NdeII GATC 2 cut(s) 266, 560
NlaIII CATG 2 cut(s) 300, 462
NlaIV GGNNCC 6 cut(s) 7, 339, 523, 562, 576, 651
NmuCI GTSAC 1 cut(s) 506
NsiI ATGCAT 1 cut(s) 460
NspV TTCGAA 1 cut(s) 81
OliI CACNNNNGTG 1 cut(s) 249
PaeR7I CTCGAG 1 cut(s) 211
PceI AGGCCT 1 cut(s) 425
PfeI GAWTC 1 cut(s) 108
PflFI GACNNNGTC 1 cut(s) 32
PflMI CCANNNNNTGG 1 cut(s) 617
PfoI TCCNGGA 1 cut(s) 372
PkrI GCNGC 5 cut(s) 313, 394, 414, 574, 579
PleI GAGTC 1 cut(s) 503
PluTI GGCGCC 1 cut(s) 578
PmaCI CACGTG 1 cut(s) 272
PmlI CACGTG 1 cut(s) 272
PpsI GAGTC 1 cut(s) 503
Ppu21I YACGTR 3 cut(s) 272, 467, 598
Psp6I CCWGG 1 cut(s) 537
PspCI CACGTG 1 cut(s) 272
PspFI CCCAGC 1 cut(s) 550
PspGI CCWGG 1 cut(s) 537
PspN4I GGNNCC 6 cut(s) 7, 339, 523, 562, 576, 651
PspPI GGNCC 2 cut(s) 279, 343
PspXI VCTCGAGB 1 cut(s) 211
PsuI RGATCY 1 cut(s) 560
PsyI GACNNNGTC 1 cut(s) 32
RsaI GTAC 2 cut(s) 588, 596
RsaNI GTAC 2 cut(s) 587, 595
RseI CAYNNNNRTG 1 cut(s) 249
SaqAI TTAA 3 cut(s) 90, 194, 680
SatI GCNGC 5 cut(s) 312, 393, 413, 573, 578
Sau3AI GATC 2 cut(s) 266, 560
Sau96I GGNCC 2 cut(s) 279, 343
SchI GAGTC 1 cut(s) 503
ScrFI CCNGG 4 cut(s) 227, 316, 374, 539
SduI GDGCHC 1 cut(s) 321
SfaNI GCATC 4 cut(s) 222, 367, 379, 445
SfoI GGCGCC 1 cut(s) 576
Sfr274I CTCGAG 1 cut(s) 211
SfuI TTCGAA 1 cut(s) 81
SinI GGWCC 1 cut(s) 343
SlaI CTCGAG 1 cut(s) 211
SmiMI CAYNNNNRTG 1 cut(s) 249
SmlI CTYRAG 1 cut(s) 211
SmoI CTYRAG 1 cut(s) 211
Sse9I AATT 2 cut(s) 681, 703
SseBI AGGCCT 1 cut(s) 425
SsiI CCGC 6 cut(s) 311, 392, 401, 542, 572, 578
SspDI GGCGCC 1 cut(s) 574
SspMI CTAG 1 cut(s) 736
StuI AGGCCT 1 cut(s) 425
StyD4I CCNGG 4 cut(s) 225, 314, 372, 537
TaaI ACNGT 1 cut(s) 59
TaiI ACGT 4 cut(s) 21, 274, 469, 600
TaqI TCGA 3 cut(s) 81, 106, 212
TasI AATT 2 cut(s) 681, 703
TauI GCSGC 4 cut(s) 314, 395, 575, 580
TfiI GAWTC 1 cut(s) 108
Tru1I TTAA 3 cut(s) 90, 194, 680
Tru9I TTAA 3 cut(s) 90, 194, 680
TscAI CASTG 1 cut(s) 630
TseFI GTSAC 1 cut(s) 506
TseI GCWGC 1 cut(s) 412
Tsp45I GTSAC 1 cut(s) 506
TspDTI ATGAA 1 cut(s) 698
TspGWI ACGGA 4 cut(s) 32, 115, 164, 553
TspRI CASTG 1 cut(s) 630
Tth111I GACNNNGTC 1 cut(s) 32
Van91I CCANNNNNTGG 1 cut(s) 617
VpaK11BI GGWCC 1 cut(s) 343
XapI RAATTY 1 cut(s) 703
XhoI CTCGAG 1 cut(s) 211
XspI CTAG 1 cut(s) 736
Zsp2I ATGCAT 1 cut(s) 460
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.