Rh3CG239100

Carboxylesterase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr3C
OG0001599
Physical Location & Seq
Reverse (-)
22899781 .. 22903158
3378 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh3CG239100.1

Sequence Viewer

Length: 852 bp
ATGTCCCCATCATCAAACTTACAGAATCACCCCCCAGAATTTCACTCTATTCCCACTACCACCATCCCTCTTTGTCCTCCTTCTCTACTTCTCTATATATACACCCTAACCAAACCTTCCCACTTCATCGATCCTAGTTCTTATTTCTTAAACCATAAAAAAATGGGTTCCCTCGCTCACATTGTGGAAGACTGCATGGGCGTTCTCCAACTCTTTAGCGACGGTTCCGTCCATCGCTGCTCTTTGAAAGACATAAACTTCCCGTTTCCAGCCGTTAACGACAACTCCGTGGACTTCAAAGACGTCGTTTTCGACAGAAAGCTCAACATTTCCCTACGTGTGTACAGACCTAAAAGCCATGCGTCCCCGACTCCCGCAAAGCTCCCCGTGGTGTTTTACTTCCACGGGGGCGGTTTCTGCGTTGGCTCGCGGGTGTGGCCCAACTGCCACAACTGCTGCATCCGCCTGGCATCTGAGCTCAACGCTCTCGTCGTGGCACCAGACTACCGGCTCGCCCCCGAGCACAAGCTCCCGGCCGCGGTGGATGACGCGGTGAGTGCGGTGGAGTGGCTGCAGAGGGAGGCTTTGATGAGTGAGGGCAGTGGTGATTGTGATGCATGGCTGGGTGGTGGTATGGTTGACTTTGACCGGGTTTATGTGGTGGGCGATTCATCAGGAGGTAATATGGCTCACCACGTGGCCGTACGGCTCGGAGCCGGGTCGGTCAAGGCGGCGCCGGTGCGGGTACGCGGATATGTGCTTTTGGCGCCATTTTTTGGTGGAGTGGAGAGGACAAAGTCGGAGGAGGGTCCGTCGGAAACGTTTTTGAATTTGGAGATACTTGACAGGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003824 GO:0008150 GO:0008152 GO:0009056 GO:0016787
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Abhydrolase_3

Protein Analysis

283

Amino Acids

31.0

Weight (kDa)

6.29

Isoelectric Point (pI)

50.47

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
COesterase PF00135 112 - 173 4.9e-07 Carboxylesterase family
BD-FAE PF20434 114 - 235 3.7e-10 BD-FAE
Abhydrolase_3 PF07859 131 - 270 5.7e-38 alpha/beta hydrolase fold
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 227
AatII GACGTC 1 cut(s) 306
AccB1I GGYRCC 3 cut(s) 496, 733, 766
AccB7I CCANNNNNTGG 1 cut(s) 776
AccII CGCG 4 cut(s) 430, 539, 551, 750
AclI AACGTT 1 cut(s) 821
AclWI GGATC 1 cut(s) 125
AcoI YGGCCR 2 cut(s) 534, 699
AcsI RAATTY 2 cut(s) 38, 829
AcvI CACGTG 1 cut(s) 697
AcyI GRCGYC 3 cut(s) 303, 734, 767
AdeI CACNNNGTG 2 cut(s) 184, 697
AfaI GTAC 3 cut(s) 344, 705, 747
AfiI CCNNNNNNNGG 2 cut(s) 538, 776
AflIII ACRYGT 1 cut(s) 337
AgsI TTSAA 3 cut(s) 247, 298, 829
AjnI CCWGG 1 cut(s) 465
AluBI AGCT 4 cut(s) 322, 382, 478, 529
AluI AGCT 4 cut(s) 322, 382, 478, 529
Alw21I GWGCWC 2 cut(s) 480, 525
AlwI GGATC 1 cut(s) 125
Ama87I CYCGRG 1 cut(s) 518
AoxI GGCC 3 cut(s) 437, 534, 699
ApeKI GCWGC 3 cut(s) 237, 456, 571
ApoI RAATTY 2 cut(s) 38, 829
ArsI GACNNNNNNTTYG 2 cut(s) 293, 325
AspLEI GCGC 2 cut(s) 736, 769
AspS9I GGNCC 2 cut(s) 438, 809
AsuC2I CCSGG 3 cut(s) 533, 650, 718
AsuHPI GGTGA 4 cut(s) 20, 565, 617, 683
AvaI CYCGRG 1 cut(s) 518
AvaII GGWCC 1 cut(s) 809
BanI GGYRCC 3 cut(s) 496, 733, 766
BanII GRGCYC 1 cut(s) 480
BbrPI CACGTG 1 cut(s) 697
BbsI GAAGAC 1 cut(s) 195
Bbv12I GWGCWC 2 cut(s) 480, 525
BbvI GCAGC 3 cut(s) 224, 443, 558
BccI CCATC 3 cut(s) 16, 71, 240
BceAI ACGGC 3 cut(s) 257, 686, 722
BciT130I CCWGG 1 cut(s) 467
BcnI CCSGG 3 cut(s) 533, 650, 718
BfaI CTAG 1 cut(s) 135
BfmI CTRYAG 1 cut(s) 572
BfoI RGCGCY 2 cut(s) 737, 770
BisI GCNGC 5 cut(s) 238, 457, 537, 572, 732
BlsI GCNGC 5 cut(s) 239, 458, 538, 573, 733
Bme1390I CCNGG 4 cut(s) 467, 533, 650, 718
Bme18I GGWCC 1 cut(s) 809
BmeT110I CYCGRG 1 cut(s) 518
BmgT120I GGNCC 2 cut(s) 438, 809
BmiI GGNNCC 7 cut(s) 169, 226, 498, 715, 735, 768, 810
BmrFI CCNGG 4 cut(s) 467, 533, 650, 718
BmsI GCATC 3 cut(s) 468, 479, 604
BpiI GAAGAC 1 cut(s) 195
BpuMI CCSGG 3 cut(s) 533, 650, 718
Bsa29I ATCGAT 1 cut(s) 129
BsaAI YACGTR 2 cut(s) 338, 697
BsaHI GRCGYC 3 cut(s) 303, 734, 767
BsaJI CCNNGG 4 cut(s) 288, 387, 403, 537
BsaXI ACNNNNNCTCC 4 cut(s) 269, 299, 797, 827
Bsc4I CCNNNNNNNGG 2 cut(s) 538, 776
Bse118I RCCGGY 2 cut(s) 507, 736
BseBI CCWGG 1 cut(s) 467
BseCI ATCGAT 1 cut(s) 129
BseDI CCNNGG 4 cut(s) 288, 387, 403, 537
BseGI GGATG 3 cut(s) 63, 459, 550
BseLI CCNNNNNNNGG 2 cut(s) 538, 776
BseMII CTCAG 1 cut(s) 465
BseRI GAGGAG 1 cut(s) 818
BseX3I CGGCCG 1 cut(s) 534
BseXI GCAGC 3 cut(s) 224, 443, 558
BseYI CCCAGC 1 cut(s) 622
Bsh1236I CGCG 4 cut(s) 430, 539, 551, 750
Bsh1285I CGRYCG 1 cut(s) 537
BshFI GGCC 3 cut(s) 439, 536, 701
BshNI GGYRCC 3 cut(s) 496, 733, 766
BshVI ATCGAT 1 cut(s) 129
BsiEI CGRYCG 1 cut(s) 537
BsiHKAI GWGCWC 2 cut(s) 480, 525
BsiHKCI CYCGRG 1 cut(s) 518
BsiSI CCGG 5 cut(s) 508, 533, 649, 717, 737
BsiWI CGTACG 1 cut(s) 703
BslFI GGGAC 1 cut(s) 349
BslI CCNNNNNNNGG 2 cut(s) 538, 776
BsmFI GGGAC 1 cut(s) 349
BsnI GGCC 3 cut(s) 439, 536, 701
BsoBI CYCGRG 1 cut(s) 518
Bsp1286I GDGCHC 2 cut(s) 480, 525
Bsp1407I TGTACA 1 cut(s) 342
Bsp143I GATC 1 cut(s) 130
BspANI GGCC 3 cut(s) 439, 536, 701
BspCNI CTCAG 1 cut(s) 466
BspDI ATCGAT 1 cut(s) 129
BspFNI CGCG 4 cut(s) 430, 539, 551, 750
BspLI GGNNCC 7 cut(s) 169, 226, 498, 715, 735, 768, 810
BspMAI CTGCAG 1 cut(s) 576
BspPI GGATC 1 cut(s) 125
BspT107I GGYRCC 3 cut(s) 496, 733, 766
BsrFI RCCGGY 2 cut(s) 507, 736
BsrGI TGTACA 1 cut(s) 342
BssAI RCCGGY 2 cut(s) 507, 736
BssECI CCNNGG 4 cut(s) 288, 387, 403, 537
BssMI GATC 1 cut(s) 130
BssNI GRCGYC 3 cut(s) 303, 734, 767
Bst2UI CCWGG 1 cut(s) 467
Bst4CI ACNGT 1 cut(s) 224
BstACI GRCGYC 3 cut(s) 303, 734, 767
BstAUI TGTACA 1 cut(s) 342
BstBAI YACGTR 2 cut(s) 338, 697
BstC8I GCNNGC 2 cut(s) 428, 513
BstDEI CTNAG 1 cut(s) 474
BstDSI CCRYGG 4 cut(s) 288, 387, 403, 537
BstF5I GGATG 3 cut(s) 63, 459, 550
BstFNI CGCG 4 cut(s) 430, 539, 551, 750
BstH2I RGCGCY 2 cut(s) 737, 770
BstHHI GCGC 2 cut(s) 736, 769
BstKTI GATC 1 cut(s) 133
BstMBI GATC 1 cut(s) 130
BstMCI CGRYCG 1 cut(s) 537
BstMWI GCNNNNNNNGC 6 cut(s) 417, 436, 453, 462, 557, 766
BstNI CCWGG 1 cut(s) 467
BstSCI CCNGG 4 cut(s) 465, 531, 648, 716
BstSFI CTRYAG 1 cut(s) 572
BstUI CGCG 4 cut(s) 430, 539, 551, 750
BstV1I GCAGC 3 cut(s) 224, 443, 558
BstV2I GAAGAC 1 cut(s) 195
BstZI CGGCCG 1 cut(s) 534
Bsu15I ATCGAT 1 cut(s) 129
BsuRI GGCC 3 cut(s) 439, 536, 701
BsuTUI ATCGAT 1 cut(s) 129
BtgI CCRYGG 4 cut(s) 288, 387, 403, 537
BtgZI GCGATG 1 cut(s) 218
BtsCI GGATG 3 cut(s) 63, 459, 550
BtsI GCAGTG 1 cut(s) 607
BtsIMutI CAGTG 1 cut(s) 607
Cac8I GCNNGC 2 cut(s) 428, 513
CfoI GCGC 2 cut(s) 736, 769
Cfr10I RCCGGY 2 cut(s) 507, 736
Cfr13I GGNCC 2 cut(s) 438, 809
Cfr42I CCGCGG 1 cut(s) 540
ClaI ATCGAT 1 cut(s) 129
CseI GACGC 2 cut(s) 351, 557
Csp6I GTAC 3 cut(s) 343, 704, 746
CviAII CATG 3 cut(s) 196, 359, 618
CviQI GTAC 3 cut(s) 343, 704, 746
DdeI CTNAG 1 cut(s) 474
DinI GGCGCC 2 cut(s) 735, 768
DpnI GATC 1 cut(s) 132
DpnII GATC 1 cut(s) 130
DraIII CACNNNGTG 2 cut(s) 184, 697
DrdI GACNNNNNNGTC 1 cut(s) 227
DseDI GACNNNNNNGTC 1 cut(s) 227
EaeI YGGCCR 2 cut(s) 534, 699
EagI CGGCCG 1 cut(s) 534
EciI GGCGGA 1 cut(s) 452
Ecl136II GAGCTC 1 cut(s) 478
EclXI CGGCCG 1 cut(s) 534
Eco24I GRGCYC 1 cut(s) 480
Eco47I GGWCC 1 cut(s) 809
Eco52I CGGCCG 1 cut(s) 534
Eco53kI GAGCTC 1 cut(s) 478
Eco72I CACGTG 1 cut(s) 697
Eco88I CYCGRG 1 cut(s) 518
EcoICRI GAGCTC 1 cut(s) 478
EcoRII CCWGG 1 cut(s) 465
EcoT22I ATGCAT 1 cut(s) 619
EcoT38I GRGCYC 1 cut(s) 480
EgeI GGCGCC 2 cut(s) 735, 768
EheI GGCGCC 2 cut(s) 735, 768
FaeI CATG 3 cut(s) 199, 362, 621
FaqI GGGAC 1 cut(s) 349
FatI CATG 3 cut(s) 195, 358, 617
FauI CCCGC 3 cut(s) 382, 423, 735
Fnu4HI GCNGC 5 cut(s) 238, 457, 537, 572, 732
FokI GGATG 3 cut(s) 50, 446, 557
FriOI GRGCYC 1 cut(s) 480
Fsp4HI GCNGC 5 cut(s) 238, 457, 537, 572, 732
FspBI CTAG 1 cut(s) 135
GlaI GCGC 2 cut(s) 735, 768
GluI GCNGC 5 cut(s) 238, 457, 537, 572, 732
GsaI CCCAGC 1 cut(s) 626
HaeII RGCGCY 2 cut(s) 737, 770
HaeIII GGCC 3 cut(s) 439, 536, 701
HapII CCGG 5 cut(s) 508, 533, 649, 717, 737
HgaI GACGC 2 cut(s) 351, 557
HhaI GCGC 2 cut(s) 736, 769
Hin1I GRCGYC 3 cut(s) 303, 734, 767
Hin1II CATG 3 cut(s) 199, 362, 621
Hin6I GCGC 2 cut(s) 734, 767
HinP1I GCGC 2 cut(s) 734, 767
HincII GTYRAC 2 cut(s) 277, 640
HindII GTYRAC 2 cut(s) 277, 640
HinfI GANTC 3 cut(s) 25, 370, 668
HpaI GTTAAC 1 cut(s) 277
HpaII CCGG 5 cut(s) 508, 533, 649, 717, 737
HphI GGTGA 4 cut(s) 20, 565, 617, 683
Hpy166II GTNNAC 4 cut(s) 277, 292, 343, 640
Hpy188I TCNGA 4 cut(s) 475, 713, 802, 817
Hpy188III TCNNGA 1 cut(s) 675
Hpy8I GTNNAC 4 cut(s) 277, 292, 343, 640
Hpy99I CGWCG 4 cut(s) 224, 308, 494, 817
HpyAV CCTTC 2 cut(s) 90, 126
HpyCH4III ACNGT 1 cut(s) 224
HpyCH4IV ACGT 4 cut(s) 303, 337, 696, 821
HpyCH4V TGCA 4 cut(s) 195, 459, 574, 617
HpyF10VI GCNNNNNNNGC 6 cut(s) 417, 436, 453, 462, 557, 766
HpyF3I CTNAG 1 cut(s) 474
HpySE526I ACGT 4 cut(s) 303, 337, 696, 821
Hsp92I GRCGYC 3 cut(s) 303, 734, 767
Hsp92II CATG 3 cut(s) 199, 362, 621
HspAI GCGC 2 cut(s) 734, 767
KasI GGCGCC 2 cut(s) 733, 766
KspAI GTTAAC 1 cut(s) 277
KspI CCGCGG 1 cut(s) 540
Kzo9I GATC 1 cut(s) 130
LmnI GCTCC 3 cut(s) 387, 534, 713
Lsp1109I GCAGC 3 cut(s) 224, 443, 558
LweI GCATC 3 cut(s) 468, 479, 604
MaeI CTAG 1 cut(s) 135
MaeII ACGT 4 cut(s) 303, 337, 696, 821
MalI GATC 1 cut(s) 132
MboI GATC 1 cut(s) 130
MboII GAAGA 1 cut(s) 200
MhlI GDGCHC 2 cut(s) 480, 525
MluCI AATT 2 cut(s) 38, 829
Mly113I GGCGCC 2 cut(s) 734, 767
MlyI GAGTC 1 cut(s) 364
MmeI TCCRAC 3 cut(s) 232, 780, 795
Mph1103I ATGCAT 1 cut(s) 619
MseI TTAA 2 cut(s) 149, 276
MspA1I CMGCKG 1 cut(s) 539
MspI CCGG 5 cut(s) 508, 533, 649, 717, 737
MspR9I CCNGG 4 cut(s) 467, 533, 650, 718
MvaI CCWGG 1 cut(s) 467
MvnI CGCG 4 cut(s) 430, 539, 551, 750
MwoI GCNNNNNNNGC 6 cut(s) 417, 436, 453, 462, 557, 766
NarI GGCGCC 2 cut(s) 734, 767
NciI CCSGG 3 cut(s) 533, 650, 718
NdeII GATC 1 cut(s) 130
NlaIII CATG 3 cut(s) 199, 362, 621
NlaIV GGNNCC 7 cut(s) 169, 226, 498, 715, 735, 768, 810
NsiI ATGCAT 1 cut(s) 619
PcsI WCGNNNNNNNCGW 3 cut(s) 285, 309, 489
PfeI GAWTC 2 cut(s) 25, 668
Pfl23II CGTACG 1 cut(s) 703
PflFI GACNNNGTC 1 cut(s) 796
PflMI CCANNNNNTGG 1 cut(s) 776
PkrI GCNGC 5 cut(s) 239, 458, 538, 573, 733
PleI GAGTC 1 cut(s) 364
PluTI GGCGCC 2 cut(s) 737, 770
PmaCI CACGTG 1 cut(s) 697
PmlI CACGTG 1 cut(s) 697
PpsI GAGTC 1 cut(s) 364
Ppu21I YACGTR 2 cut(s) 338, 697
Psp124BI GAGCTC 1 cut(s) 480
Psp1406I AACGTT 1 cut(s) 821
Psp6I CCWGG 1 cut(s) 465
PspCI CACGTG 1 cut(s) 697
PspFI CCCAGC 1 cut(s) 622
PspGI CCWGG 1 cut(s) 465
PspLI CGTACG 1 cut(s) 703
PspN4I GGNNCC 7 cut(s) 169, 226, 498, 715, 735, 768, 810
PspPI GGNCC 2 cut(s) 438, 809
PstI CTGCAG 1 cut(s) 576
PsyI GACNNNGTC 1 cut(s) 796
RsaI GTAC 3 cut(s) 344, 705, 747
RsaNI GTAC 3 cut(s) 343, 704, 746
SacI GAGCTC 1 cut(s) 480
SacII CCGCGG 1 cut(s) 540
SaqAI TTAA 2 cut(s) 149, 276
SatI GCNGC 5 cut(s) 238, 457, 537, 572, 732
Sau3AI GATC 1 cut(s) 130
Sau96I GGNCC 2 cut(s) 438, 809
SchI GAGTC 1 cut(s) 364
ScrFI CCNGG 4 cut(s) 467, 533, 650, 718
SduI GDGCHC 2 cut(s) 480, 525
SfaNI GCATC 3 cut(s) 468, 479, 604
SfcI CTRYAG 1 cut(s) 572
SfoI GGCGCC 2 cut(s) 735, 768
Sfr303I CCGCGG 1 cut(s) 540
SgrAI CRCCGGYG 1 cut(s) 736
SgrBI CCGCGG 1 cut(s) 540
SinI GGWCC 1 cut(s) 809
Sse9I AATT 2 cut(s) 38, 829
SspDI GGCGCC 2 cut(s) 733, 766
SspMI CTAG 1 cut(s) 135
SstI GAGCTC 1 cut(s) 480
StyD4I CCNGG 4 cut(s) 465, 531, 648, 716
TaaI ACNGT 1 cut(s) 224
TaiI ACGT 4 cut(s) 306, 340, 699, 824
TaqI TCGA 2 cut(s) 129, 312
TaqII GACCGA 1 cut(s) 712
TasI AATT 2 cut(s) 38, 829
TatI WGTACW 1 cut(s) 342
TauI GCSGC 2 cut(s) 539, 734
TfiI GAWTC 2 cut(s) 25, 668
Tru1I TTAA 2 cut(s) 149, 276
Tru9I TTAA 2 cut(s) 149, 276
TscAI CASTG 1 cut(s) 607
TseI GCWGC 3 cut(s) 237, 456, 571
TspDTI ATGAA 2 cut(s) 115, 660
TspGWI ACGGA 3 cut(s) 217, 277, 801
TspRI CASTG 1 cut(s) 607
Tth111I GACNNNGTC 1 cut(s) 796
Van91I CCANNNNNTGG 1 cut(s) 776
VpaK11BI GGWCC 1 cut(s) 809
XapI RAATTY 2 cut(s) 38, 829
XspI CTAG 1 cut(s) 135
ZraI GACGTC 1 cut(s) 304
Zsp2I ATGCAT 1 cut(s) 619
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.