No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr7g0197261 RchiOBHm_Chr7g0208591 |
| rosa_laevigata | RLG00000002652 RLG00000007562 RLG00000012283 RLG00000015297 RLG00000015393 RLG00000015895 RLG00000017502 RLG00000017654 RLG00000019036 RLG00000019574 RLG00000019696 RLG00000024994 RLG00000027623 RLG00000030212 RLG00000030573 RLG00000032689 |
| rosa_multiflora | Rmu_sc0001626.1_g000035 Rmu_sc0007205.1_g000015 |
| rosa_roxburghii | Rroxscaffold_1G00046180 Rroxscaffold_4G00290760 Rroxscaffold_5G00353760 Rroxscaffold_7G00163430 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 93 |
| AccB1I | GGYRCC | 2 cut(s) | 223, 242 |
| AciI | CCGC | 1 cut(s) | 193 |
| AclWI | GGATC | 1 cut(s) | 102 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 50, 91, 319, 391 |
| AgsI | TTSAA | 1 cut(s) | 377 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 73, 105 |
| AluBI | AGCT | 2 cut(s) | 7, 26 |
| AluI | AGCT | 2 cut(s) | 7, 26 |
| AlwI | GGATC | 1 cut(s) | 102 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 108 |
| AoxI | GGCC | 4 cut(s) | 156, 270, 306, 366 |
| ApeKI | GCWGC | 1 cut(s) | 190 |
| AspS9I | GGNCC | 3 cut(s) | 156, 270, 306 |
| AsuC2I | CCSGG | 2 cut(s) | 160, 211 |
| AsuHPI | GGTGA | 1 cut(s) | 68 |
| BaeGI | GKGCMC | 1 cut(s) | 228 |
| BanI | GGYRCC | 2 cut(s) | 223, 242 |
| BanII | GRGCYC | 1 cut(s) | 345 |
| BbvI | GCAGC | 1 cut(s) | 202 |
| BceAI | ACGGC | 1 cut(s) | 69 |
| BcnI | CCSGG | 2 cut(s) | 160, 211 |
| BfuAI | ACCTGC | 1 cut(s) | 93 |
| BisI | GCNGC | 1 cut(s) | 191 |
| BlsI | GCNGC | 1 cut(s) | 192 |
| Bme1390I | CCNGG | 2 cut(s) | 160, 211 |
| BmgT120I | GGNCC | 3 cut(s) | 156, 270, 306 |
| BmiI | GGNNCC | 3 cut(s) | 157, 225, 244 |
| BmrFI | CCNGG | 2 cut(s) | 160, 211 |
| BpuEI | CTTGAG | 1 cut(s) | 277 |
| BpuMI | CCSGG | 2 cut(s) | 160, 211 |
| BsaBI | GATNNNNATC | 1 cut(s) | 93 |
| BsaJI | CCNNGG | 1 cut(s) | 176 |
| BsaWI | WCCGGW | 1 cut(s) | 115 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 179, 209 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 50, 91, 319, 391 |
| Bse8I | GATNNNNATC | 1 cut(s) | 93 |
| BseDI | CCNNGG | 1 cut(s) | 176 |
| BseGI | GGATG | 1 cut(s) | 168 |
| BseJI | GATNNNNATC | 1 cut(s) | 93 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 50, 91, 319, 391 |
| BseSI | GKGCMC | 1 cut(s) | 228 |
| BseXI | GCAGC | 1 cut(s) | 202 |
| Bsh1285I | CGRYCG | 1 cut(s) | 197 |
| BshFI | GGCC | 4 cut(s) | 158, 272, 308, 368 |
| BshNI | GGYRCC | 2 cut(s) | 223, 242 |
| BsiEI | CGRYCG | 1 cut(s) | 197 |
| BsiSI | CCGG | 4 cut(s) | 116, 159, 210, 365 |
| BslFI | GGGAC | 1 cut(s) | 226 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 50, 91, 319, 391 |
| BsmFI | GGGAC | 1 cut(s) | 226 |
| BsmI | GAATGC | 1 cut(s) | 111 |
| BsnI | GGCC | 4 cut(s) | 158, 272, 308, 368 |
| Bsp1286I | GDGCHC | 2 cut(s) | 228, 345 |
| Bsp143I | GATC | 3 cut(s) | 46, 58, 94 |
| BspACI | CCGC | 1 cut(s) | 193 |
| BspANI | GGCC | 4 cut(s) | 158, 272, 308, 368 |
| BspLI | GGNNCC | 3 cut(s) | 157, 225, 244 |
| BspMI | ACCTGC | 1 cut(s) | 93 |
| BspPI | GGATC | 1 cut(s) | 102 |
| BspT107I | GGYRCC | 2 cut(s) | 223, 242 |
| BssECI | CCNNGG | 1 cut(s) | 176 |
| BssMI | GATC | 3 cut(s) | 46, 58, 94 |
| BssT1I | CCWWGG | 1 cut(s) | 176 |
| Bst4CI | ACNGT | 1 cut(s) | 217 |
| Bst6I | CTCTTC | 1 cut(s) | 280 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 108 |
| BstF5I | GGATG | 1 cut(s) | 168 |
| BstKTI | GATC | 3 cut(s) | 49, 61, 97 |
| BstMBI | GATC | 3 cut(s) | 46, 58, 94 |
| BstMCI | CGRYCG | 1 cut(s) | 197 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 108 |
| BstSCI | CCNGG | 2 cut(s) | 158, 209 |
| BstSLI | GKGCMC | 1 cut(s) | 228 |
| BstV1I | GCAGC | 1 cut(s) | 202 |
| BstX2I | RGATCY | 1 cut(s) | 94 |
| BstYI | RGATCY | 1 cut(s) | 94 |
| BsuRI | GGCC | 4 cut(s) | 158, 272, 308, 368 |
| BtsCI | GGATG | 1 cut(s) | 168 |
| BveI | ACCTGC | 1 cut(s) | 93 |
| CaiI | CAGNNNCTG | 1 cut(s) | 108 |
| Cfr13I | GGNCC | 3 cut(s) | 156, 270, 306 |
| CspCI | CAANNNNNGTGG | 4 cut(s) | 112, 147, 165, 200 |
| CviAII | CATG | 1 cut(s) | 267 |
| DpnI | GATC | 3 cut(s) | 48, 60, 96 |
| DpnII | GATC | 3 cut(s) | 46, 58, 94 |
| Eam1104I | CTCTTC | 1 cut(s) | 280 |
| EarI | CTCTTC | 1 cut(s) | 280 |
| Eco130I | CCWWGG | 1 cut(s) | 176 |
| Eco24I | GRGCYC | 1 cut(s) | 345 |
| EcoT14I | CCWWGG | 1 cut(s) | 176 |
| EcoT38I | GRGCYC | 1 cut(s) | 345 |
| ErhI | CCWWGG | 1 cut(s) | 176 |
| FaeI | CATG | 1 cut(s) | 270 |
| FaiI | YATR | 4 cut(s) | 75, 268, 337, 339 |
| FaqI | GGGAC | 1 cut(s) | 226 |
| FatI | CATG | 1 cut(s) | 266 |
| Fnu4HI | GCNGC | 1 cut(s) | 191 |
| FokI | GGATG | 1 cut(s) | 175 |
| FriOI | GRGCYC | 1 cut(s) | 345 |
| Fsp4HI | GCNGC | 1 cut(s) | 191 |
| GluI | GCNGC | 1 cut(s) | 191 |
| HaeIII | GGCC | 4 cut(s) | 158, 272, 308, 368 |
| HapII | CCGG | 4 cut(s) | 116, 159, 210, 365 |
| Hin1II | CATG | 1 cut(s) | 270 |
| HinfI | GANTC | 2 cut(s) | 142, 166 |
| HpaII | CCGG | 4 cut(s) | 116, 159, 210, 365 |
| HphI | GGTGA | 1 cut(s) | 68 |
| Hpy188III | TCNNGA | 1 cut(s) | 18 |
| HpyAV | CCTTC | 2 cut(s) | 319, 323 |
| HpyCH4III | ACNGT | 1 cut(s) | 217 |
| HpyCH4IV | ACGT | 1 cut(s) | 10 |
| HpyCH4V | TGCA | 3 cut(s) | 111, 328, 403 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 108 |
| HpySE526I | ACGT | 1 cut(s) | 10 |
| Hsp92II | CATG | 1 cut(s) | 270 |
| Kzo9I | GATC | 3 cut(s) | 46, 58, 94 |
| LmnI | GCTCC | 2 cut(s) | 4, 187 |
| Lsp1109I | GCAGC | 1 cut(s) | 202 |
| MaeII | ACGT | 1 cut(s) | 10 |
| MalI | GATC | 3 cut(s) | 48, 60, 96 |
| MboI | GATC | 3 cut(s) | 46, 58, 94 |
| MboII | GAAGA | 3 cut(s) | 161, 262, 267 |
| MflI | RGATCY | 1 cut(s) | 94 |
| MhlI | GDGCHC | 2 cut(s) | 228, 345 |
| MlyI | GAGTC | 1 cut(s) | 151 |
| MmeI | TCCRAC | 1 cut(s) | 264 |
| MnlI | CCTC | 5 cut(s) | 44, 175, 283, 372, 379 |
| MspA1I | CMGCKG | 1 cut(s) | 193 |
| MspI | CCGG | 4 cut(s) | 116, 159, 210, 365 |
| MspR9I | CCNGG | 2 cut(s) | 160, 211 |
| Mva1269I | GAATGC | 1 cut(s) | 111 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 108 |
| NciI | CCSGG | 2 cut(s) | 160, 211 |
| NdeII | GATC | 3 cut(s) | 46, 58, 94 |
| NlaIII | CATG | 1 cut(s) | 270 |
| NlaIV | GGNNCC | 3 cut(s) | 157, 225, 244 |
| NmeAIII | GCCGAG | 1 cut(s) | 271 |
| PctI | GAATGC | 1 cut(s) | 111 |
| PfeI | GAWTC | 1 cut(s) | 166 |
| PfoI | TCCNGGA | 1 cut(s) | 209 |
| PkrI | GCNGC | 1 cut(s) | 192 |
| PleI | GAGTC | 1 cut(s) | 150 |
| PpsI | GAGTC | 1 cut(s) | 150 |
| PspN4I | GGNNCC | 3 cut(s) | 157, 225, 244 |
| PspPI | GGNCC | 3 cut(s) | 156, 270, 306 |
| PstNI | CAGNNNCTG | 1 cut(s) | 108 |
| PsuI | RGATCY | 1 cut(s) | 94 |
| SatI | GCNGC | 1 cut(s) | 191 |
| Sau3AI | GATC | 3 cut(s) | 46, 58, 94 |
| Sau96I | GGNCC | 3 cut(s) | 156, 270, 306 |
| SchI | GAGTC | 1 cut(s) | 151 |
| ScrFI | CCNGG | 2 cut(s) | 160, 211 |
| SduI | GDGCHC | 2 cut(s) | 228, 345 |
| SetI | ASST | 6 cut(s) | 9, 13, 28, 107, 186, 359 |
| SmlI | CTYRAG | 1 cut(s) | 292 |
| SmoI | CTYRAG | 1 cut(s) | 292 |
| SsiI | CCGC | 1 cut(s) | 193 |
| SspI | AATATT | 2 cut(s) | 127, 380 |
| StyD4I | CCNGG | 2 cut(s) | 158, 209 |
| StyI | CCWWGG | 1 cut(s) | 176 |
| TaaI | ACNGT | 1 cut(s) | 217 |
| TaiI | ACGT | 1 cut(s) | 13 |
| TaqI | TCGA | 3 cut(s) | 49, 172, 203 |
| TfiI | GAWTC | 1 cut(s) | 166 |
| TseI | GCWGC | 1 cut(s) | 190 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 235 |