Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr4

Orthogroup ID

OG0008181

Physical Location & Seq

Genomic Coordinates Reverse (-)

53727756 .. 53733840

Gene Structure 6085 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000019574

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1407 bp

ATGGTCCAGGCCGTCTCTCCCTTTTATCTGTTCTTCTCCAAGAAGTCGAGGTCCTCGACCTGTGTTGAGGCGAGGCCGTTCATTCCTCCTCCAATTGGTTCGATCTGGGCTTTGAGGTCGCCTTCAGTTCGTCGTCCTCTTGGATTAGGGGCTGTTGGTGACTGGCAAGTTTGGGATCCAGGGATCCTGACGGCATCTTGTCTTCCAGTATGTCTCAAACTACCAGTGGCGCTGGTAGATTTGGTGAGATTGTGGTGTTTGTGCTTGGAGAAGAGGCCATTTTCTGGGTCCAGTCAGACTCTACTGAACTCCCTTGGTGGGCAAGATTCGATGCCGGGAAGATGCAGAAAGGTAGATGGTGGGCTGCCGGTTTGTGGGTCAGCTTTGATAGGAGCCATCGTCGCCAGGGCTGGTTCGATCGTGGTTGGTGTCAGGCTTAGGAGTCGGTTTTCGATCCGGCCTTCCAGGGTGCTGAAGAGGAGATGGACGCGGTGCCTGGGCCACATATGTACTGCGATCAGTATTGGCATTGGTGGCAGCGGATGTTGTCGGGTTGATGGGGCCGAGAGGTTCTTTCTCAGACGTAGGGCGGTGGAGCGGTGGTCGAACCCGAGGTCAGAGATAGTCTGGGTGCCAAGAGTACTTTTGGGTGCCAAAAGATCTAGTACCCTTGGGCGGTGGCCAAGGACCATGAGGAAGAGCGAGTTGGTGGTGGAGGAGATGGCAGCCGAAGAGGGTGGTGAGAGTGCGAGCGGCCGCTGGGTTTCAGAGAGGACAGTGGTGAAGAAGGGAGGGATATCAGAAAGCCATTCATGCATACTGGGAGCTGGTACCGGATGGGTTCCAGGCAATCCATATGGATATTCTTCTCCGACTCAAGCAGCAATCATCGTTGATCTTGGACTCTTAGTGTCAAAGGTGCCCGTATATATTGCAAAGATAGCACCTCAAATTTTGAGGTTCCCGCATGATGTTTCTGAGCTGGAGCAAAAGCTTACAGAACAATCAAAGATACTGTCAAATCTTCAACAAAAGGTTGATGATTTGGCATCAAAGCATGGTTACAACCCAGATGAGGAGTATGCAGAGGTAGAATCCAGATGGCGTTCACATTTGGAATCTTTTCTAGAAACTACAAGATCATTCAATATGATTTACACCGAGGACAAAGTTGCGTTCAGGACTGTCAAGTTTCTTCAAGTTCTAGTAGATCTTTACTTGAAGCTTAGCTTTTTGGTTTTAGATAACCTCGGAAATGAGCTAGCTTTCAGCATGCTTTTTGGTCTTTCTATCATCCATCTTCCTCCAGTTATCTTAGTAATTCCTACAGTACCTCAAAACCTTCAGATAAGCACTCATGAGGACCGAGTTCTAGCAACTGTGAGGGTTAAGCCATCTCATGGTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005819 GO:0005856 GO:0005874 GO:0005876 GO:0008017 GO:0008092 GO:0009524 GO:0015630 GO:0015631 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0044422 GO:0044424 GO:0044430 GO:0044444 GO:0044446 GO:0044464 GO:0051011 GO:0099080 GO:0099081 GO:0099512 GO:0099513

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Plant_NMP1

Protein Analysis

469

Amino Acids

51.67

Weight (kDa)

9.62

Isoelectric Point (pI)

62.33

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Plant_NMP1	PF06694	323 - 389	7.4e-25	Plant nuclear matrix protein 1 (NMP1)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008181)

Species	Orthologous Gene IDs
rosa_chinensis	RchiOBHm_Chr7g0197261 RchiOBHm_Chr7g0208591
rosa_laevigata	RLG00000002652 RLG00000007562 RLG00000012283 RLG00000015297 RLG00000015393 RLG00000015895 RLG00000017502 RLG00000017654 RLG00000019036 RLG00000019574 RLG00000019696 RLG00000024994 RLG00000027623 RLG00000030212 RLG00000030573 RLG00000032689
rosa_multiflora	Rmu_sc0001626.1_g000035 Rmu_sc0007205.1_g000015
rosa_roxburghii	Rroxscaffold_1G00046180 Rroxscaffold_4G00290760 Rroxscaffold_5G00353760 Rroxscaffold_7G00163430

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	830
AccB1I	GGYRCC	5 cut(s)	492, 631, 650, 830, 919
AccB7I	CCANNNNNTGG	2 cut(s)	284, 1400
AccBSI	CCGCTC	2 cut(s)	598, 753
AccII	CGCG	1 cut(s)	490
AciI	CCGC	8 cut(s)	490, 540, 590, 598, 676, 753, 757, 965
AclWI	GGATC	5 cut(s)	170, 178, 183, 191, 448
AcoI	YGGCCR	2 cut(s)	680, 754
AcsI	RAATTY	1 cut(s)	951
AcuI	CTGAAG	3 cut(s)	108, 494, 1328
AfaI	GTAC	5 cut(s)	511, 642, 667, 832, 1332
AfiI	CCNNNNNNNGG	7 cut(s)	95, 284, 318, 374, 675, 1075, 1400
AgsI	TTSAA	4 cut(s)	1028, 1147, 1199, 1222
AjnI	CCWGG	6 cut(s)	6, 178, 404, 464, 495, 844
AjuI	GAANNNNNNNTTGG	2 cut(s)	689, 721
AluBI	AGCT	8 cut(s)	383, 827, 982, 994, 1225, 1230, 1261, 1265
AluI	AGCT	8 cut(s)	383, 827, 982, 994, 1225, 1230, 1261, 1265
Alw26I	GTCTC	2 cut(s)	19, 218
AlwI	GGATC	5 cut(s)	170, 178, 183, 191, 448
Ama87I	CYCGRG	1 cut(s)	610
AoxI	GGCC	8 cut(s)	9, 74, 275, 458, 499, 561, 680, 754
ApeKI	GCWGC	4 cut(s)	364, 537, 725, 881
ApoI	RAATTY	1 cut(s)	951
ArsI	GACNNNNNNTTYG	4 cut(s)	599, 631, 1001, 1033
Asp700I	GAANNNNTTC	1 cut(s)	1122
Asp718I	GGTACC	1 cut(s)	830
AspLEI	GCGC	1 cut(s)	232
AspS9I	GGNCC	7 cut(s)	4, 51, 288, 499, 561, 687, 1363
AsuC2I	CCSGG	1 cut(s)	336
AsuHPI	GGTGA	4 cut(s)	170, 256, 752, 793
AsuNHI	GCTAGC	1 cut(s)	1261
AvaI	CYCGRG	1 cut(s)	610
AvaII	GGWCC	5 cut(s)	4, 51, 288, 687, 1363
BaeGI	GKGCMC	1 cut(s)	924
BalI	TGGCCA	1 cut(s)	682
BamHI	GGATCC	2 cut(s)	175, 183
BanI	GGYRCC	5 cut(s)	492, 631, 650, 830, 919
BbsI	GAAGAC	1 cut(s)	194
BbvI	GCAGC	4 cut(s)	351, 549, 737, 893
BccI	CCATC	9 cut(s)	350, 404, 477, 551, 715, 831, 1095, 1305, 1402
BceAI	ACGGC	2 cut(s)	61, 207
BciT130I	CCWGG	6 cut(s)	8, 180, 406, 466, 497, 846
BcnI	CCSGG	1 cut(s)	336
BcoDI	GTCTC	2 cut(s)	19, 218
BfaI	CTAG	5 cut(s)	663, 1127, 1205, 1262, 1373
BfmI	CTRYAG	1 cut(s)	1326
BfoI	RGCGCY	1 cut(s)	233
BglII	AGATCT	2 cut(s)	659, 1210
BisI	GCNGC	6 cut(s)	365, 538, 726, 754, 757, 882
BlpI	GCTNAGC	1 cut(s)	1226
BlsI	GCNGC	6 cut(s)	366, 539, 727, 755, 758, 883
BmcAI	AGTACT	1 cut(s)	642
Bme1390I	CCNGG	7 cut(s)	8, 180, 336, 406, 466, 497, 846
Bme18I	GGWCC	5 cut(s)	4, 51, 288, 687, 1363
BmeT110I	CYCGRG	1 cut(s)	610
BmgT120I	GGNCC	7 cut(s)	4, 51, 288, 499, 561, 687, 1363
BmrFI	CCNGG	7 cut(s)	8, 180, 336, 406, 466, 497, 846
BmrI	ACTGGG	1 cut(s)	830
BmsI	GCATC	4 cut(s)	203, 321, 332, 1058
BmtI	GCTAGC	1 cut(s)	1265
BmuI	ACTGGG	1 cut(s)	830
BpiI	GAAGAC	1 cut(s)	194
BpmI	CTGGAG	2 cut(s)	1004, 1290
Bpu10I	CCTNAGC	1 cut(s)	437
Bpu1102I	GCTNAGC	1 cut(s)	1226
BpuEI	CTTGAG	1 cut(s)	861
BpuMI	CCSGG	1 cut(s)	336
BsaWI	WCCGGW	1 cut(s)	833
BsaXI	ACNNNNNCTCC	4 cut(s)	384, 414, 587, 617
Bsc4I	CCNNNNNNNGG	7 cut(s)	95, 284, 318, 374, 675, 1075, 1400
Bse118I	RCCGGY	1 cut(s)	367
Bse1I	ACTGG	6 cut(s)	167, 206, 224, 291, 825, 1307
BseBI	CCWGG	6 cut(s)	8, 180, 406, 466, 497, 846
BseGI	GGATG	3 cut(s)	548, 842, 1293
BseLI	CCNNNNNNNGG	7 cut(s)	95, 284, 318, 374, 675, 1075, 1400
BseMII	CTCAG	2 cut(s)	592, 969
BseNI	ACTGG	6 cut(s)	167, 206, 224, 291, 825, 1307
BseRI	GAGGAG	4 cut(s)	78, 493, 731, 1091
BseSI	GKGCMC	1 cut(s)	924
BseX3I	CGGCCG	1 cut(s)	754
BseXI	GCAGC	4 cut(s)	351, 549, 737, 893
BseYI	CCCAGC	1 cut(s)	759
Bsh1236I	CGCG	1 cut(s)	490
Bsh1285I	CGRYCG	2 cut(s)	420, 757
BshFI	GGCC	8 cut(s)	11, 76, 277, 460, 501, 563, 682, 756
BshNI	GGYRCC	5 cut(s)	492, 631, 650, 830, 919
BsiEI	CGRYCG	2 cut(s)	420, 757
BsiHKCI	CYCGRG	1 cut(s)	610
BsiSI	CCGG	4 cut(s)	335, 368, 457, 834
BslI	CCNNNNNNNGG	7 cut(s)	95, 284, 318, 374, 675, 1075, 1400
BsmAI	GTCTC	2 cut(s)	19, 218
BsmBI	CGTCTC	1 cut(s)	19
BsnI	GGCC	8 cut(s)	11, 76, 277, 460, 501, 563, 682, 756
BsoBI	CYCGRG	1 cut(s)	610
Bsp1286I	GDGCHC	1 cut(s)	924
Bsp1720I	GCTNAGC	1 cut(s)	1226
BspACI	CCGC	8 cut(s)	490, 540, 590, 598, 676, 753, 757, 965
BspANI	GGCC	8 cut(s)	11, 76, 277, 460, 501, 563, 682, 756
BspCNI	CTCAG	2 cut(s)	591, 970
BspFNI	CGCG	1 cut(s)	490
BspHI	TCATGA	1 cut(s)	1357
BspOI	GCTAGC	1 cut(s)	1265
BspPI	GGATC	5 cut(s)	170, 178, 183, 191, 448
BspQI	GCTCTTC	1 cut(s)	692
BspT107I	GGYRCC	5 cut(s)	492, 631, 650, 830, 919
BsrBI	CCGCTC	2 cut(s)	598, 753
BsrFI	RCCGGY	1 cut(s)	367
BsrI	ACTGG	6 cut(s)	167, 206, 224, 291, 825, 1307
BssAI	RCCGGY	1 cut(s)	367
BssT1I	CCWWGG	3 cut(s)	313, 670, 683
Bst2UI	CCWGG	6 cut(s)	8, 180, 406, 466, 497, 846
Bst4CI	ACNGT	5 cut(s)	778, 1017, 1186, 1330, 1381
Bst6I	CTCTTC	4 cut(s)	266, 470, 692, 726
BstC8I	GCNNGC	3 cut(s)	751, 1263, 1274
BstDEI	CTNAG	6 cut(s)	437, 578, 907, 978, 1226, 1315
BstF5I	GGATG	3 cut(s)	548, 842, 1293
BstFNI	CGCG	1 cut(s)	490
BstH2I	RGCGCY	1 cut(s)	233
BstHHI	GCGC	1 cut(s)	232
BstMAI	GTCTC	2 cut(s)	19, 218
BstMCI	CGRYCG	2 cut(s)	420, 757
BstMWI	GCNNNNNNNGC	4 cut(s)	401, 534, 813, 941
BstNI	CCWGG	6 cut(s)	8, 180, 406, 466, 497, 846
BstNSI	RCATGY	1 cut(s)	1276
BstSCI	CCNGG	7 cut(s)	6, 178, 334, 404, 464, 495, 844
BstSFI	CTRYAG	1 cut(s)	1326
BstSLI	GKGCMC	1 cut(s)	924
BstUI	CGCG	1 cut(s)	490
BstV1I	GCAGC	4 cut(s)	351, 549, 737, 893
BstV2I	GAAGAC	1 cut(s)	194
BstX2I	RGATCY	4 cut(s)	175, 183, 659, 1210
BstYI	RGATCY	4 cut(s)	175, 183, 659, 1210
BstZI	CGGCCG	1 cut(s)	754
BsuRI	GGCC	8 cut(s)	11, 76, 277, 460, 501, 563, 682, 756
BtsCI	GGATG	3 cut(s)	548, 842, 1293
BtsIMutI	CAGTG	2 cut(s)	231, 783
Cac8I	GCNNGC	3 cut(s)	751, 1263, 1274
CciI	TCATGA	1 cut(s)	1357
CciNI	GCGGCCGC	1 cut(s)	754
CfoI	GCGC	1 cut(s)	232
Cfr10I	RCCGGY	1 cut(s)	367
Cfr13I	GGNCC	7 cut(s)	4, 51, 288, 499, 561, 687, 1363
CseI	GACGC	1 cut(s)	496
Csp6I	GTAC	5 cut(s)	510, 641, 666, 831, 1331
CviAII	CATG	7 cut(s)	691, 813, 968, 1058, 1273, 1358, 1400
CviQI	GTAC	5 cut(s)	510, 641, 666, 831, 1331
DdeI	CTNAG	6 cut(s)	437, 578, 907, 978, 1226, 1315
EaeI	YGGCCR	2 cut(s)	680, 754
EagI	CGGCCG	1 cut(s)	754
Eam1104I	CTCTTC	4 cut(s)	266, 470, 692, 726
EarI	CTCTTC	4 cut(s)	266, 470, 692, 726
EclXI	CGGCCG	1 cut(s)	754
Eco130I	CCWWGG	3 cut(s)	313, 670, 683
Eco32I	GATATC	1 cut(s)	798
Eco47I	GGWCC	5 cut(s)	4, 51, 288, 687, 1363
Eco52I	CGGCCG	1 cut(s)	754
Eco57I	CTGAAG	3 cut(s)	108, 494, 1328
Eco88I	CYCGRG	1 cut(s)	610
EcoO109I	RGGNCCY	1 cut(s)	51
EcoRII	CCWGG	6 cut(s)	6, 178, 404, 464, 495, 844
EcoRV	GATATC	1 cut(s)	798
EcoT14I	CCWWGG	3 cut(s)	313, 670, 683
EcoT22I	ATGCAT	1 cut(s)	818
ErhI	CCWWGG	3 cut(s)	313, 670, 683
Esp3I	CGTCTC	1 cut(s)	19
FaeI	CATG	7 cut(s)	694, 816, 971, 1061, 1276, 1361, 1403
FalI	AAGNNNNNCTT	2 cut(s)	1214, 1246
FatI	CATG	7 cut(s)	690, 812, 967, 1057, 1272, 1357, 1399
FauI	CCCGC	1 cut(s)	972
FauNDI	CATATG	2 cut(s)	506, 856
Fnu4HI	GCNGC	6 cut(s)	365, 538, 726, 754, 757, 882
FokI	GGATG	3 cut(s)	555, 849, 1280
Fsp4HI	GCNGC	6 cut(s)	365, 538, 726, 754, 757, 882
FspBI	CTAG	5 cut(s)	663, 1127, 1205, 1262, 1373
GlaI	GCGC	1 cut(s)	231
GluI	GCNGC	6 cut(s)	365, 538, 726, 754, 757, 882
GsaI	CCCAGC	1 cut(s)	763
GsuI	CTGGAG	2 cut(s)	1004, 1290
HaeII	RGCGCY	1 cut(s)	233
HaeIII	GGCC	8 cut(s)	11, 76, 277, 460, 501, 563, 682, 756
HapII	CCGG	4 cut(s)	335, 368, 457, 834
HgaI	GACGC	1 cut(s)	496
HhaI	GCGC	1 cut(s)	232
Hin1II	CATG	7 cut(s)	694, 816, 971, 1061, 1276, 1361, 1403
Hin6I	GCGC	1 cut(s)	230
HinP1I	GCGC	1 cut(s)	230
HindIII	AAGCTT	2 cut(s)	992, 1223
HinfI	GANTC	7 cut(s)	298, 326, 442, 874, 903, 1094, 1118
HpaII	CCGG	4 cut(s)	335, 368, 457, 834
HphI	GGTGA	4 cut(s)	170, 256, 752, 793
Hpy166II	GTNNAC	1 cut(s)	1109
Hpy188I	TCNGA	9 cut(s)	297, 581, 619, 769, 802, 873, 979, 1253, 1347
Hpy188III	TCNNGA	5 cut(s)	187, 1098, 1127, 1180, 1358
Hpy8I	GTNNAC	1 cut(s)	1109
Hpy99I	CGWCG	2 cut(s)	135, 404
HpyAV	CCTTC	4 cut(s)	132, 471, 781, 1352
HpyCH4III	ACNGT	5 cut(s)	778, 1017, 1186, 1330, 1381
HpyCH4IV	ACGT	1 cut(s)	583
HpyCH4V	TGCA	4 cut(s)	345, 816, 935, 1085
HpyF10VI	GCNNNNNNNGC	4 cut(s)	401, 534, 813, 941
HpyF3I	CTNAG	6 cut(s)	437, 578, 907, 978, 1226, 1315
HpySE526I	ACGT	1 cut(s)	583
Hsp92II	CATG	7 cut(s)	694, 816, 971, 1061, 1276, 1361, 1403
HspAI	GCGC	1 cut(s)	230
KpnI	GGTACC	1 cut(s)	834
LguI	GCTCTTC	1 cut(s)	692
LmnI	GCTCC	4 cut(s)	392, 595, 824, 985
Lsp1109I	GCAGC	4 cut(s)	351, 549, 737, 893
LweI	GCATC	4 cut(s)	203, 321, 332, 1058
MaeI	CTAG	5 cut(s)	663, 1127, 1205, 1262, 1373
MaeII	ACGT	1 cut(s)	583
MaeIII	GTNAC	2 cut(s)	158, 1061
MbiI	CCGCTC	2 cut(s)	598, 753
MfeI	CAATTG	1 cut(s)	93
MflI	RGATCY	4 cut(s)	175, 183, 659, 1210
MhlI	GDGCHC	1 cut(s)	924
MlsI	TGGCCA	1 cut(s)	682
MluCI	AATT	3 cut(s)	93, 951, 1320
MluNI	TGGCCA	1 cut(s)	682
MlyI	GAGTC	4 cut(s)	292, 451, 868, 897
MmeI	TCCRAC	1 cut(s)	896
Mox20I	TGGCCA	1 cut(s)	682
Mph1103I	ATGCAT	1 cut(s)	818
MroXI	GAANNNNTTC	1 cut(s)	1122
MscI	TGGCCA	1 cut(s)	682
MseI	TTAA	2 cut(s)	1389, 1405
Msp20I	TGGCCA	1 cut(s)	682
MspA1I	CMGCKG	2 cut(s)	540, 759
MspI	CCGG	4 cut(s)	335, 368, 457, 834
MspR9I	CCNGG	7 cut(s)	8, 180, 336, 406, 466, 497, 846
MunI	CAATTG	1 cut(s)	93
MvaI	CCWGG	6 cut(s)	8, 180, 406, 466, 497, 846
MvnI	CGCG	1 cut(s)	490
MwoI	GCNNNNNNNGC	4 cut(s)	401, 534, 813, 941
NciI	CCSGG	1 cut(s)	336
NdeI	CATATG	2 cut(s)	506, 856
NheI	GCTAGC	1 cut(s)	1261
NlaIII	CATG	7 cut(s)	694, 816, 971, 1061, 1276, 1361, 1403
NmeAIII	GCCGAG	1 cut(s)	589
NmuCI	GTSAC	1 cut(s)	158
NotI	GCGGCCGC	1 cut(s)	754
NsiI	ATGCAT	1 cut(s)	818
NspI	RCATGY	1 cut(s)	1276
PaeI	GCATGC	1 cut(s)	1276
PagI	TCATGA	1 cut(s)	1357
PciSI	GCTCTTC	1 cut(s)	692
PcsI	WCGNNNNNNNCGW	1 cut(s)	53
PdmI	GAANNNNTTC	1 cut(s)	1122
PfeI	GAWTC	3 cut(s)	326, 1094, 1118
PflMI	CCANNNNNTGG	2 cut(s)	284, 1400
PkrI	GCNGC	6 cut(s)	366, 539, 727, 755, 758, 883
Ple19I	CGATCG	1 cut(s)	420
PleI	GAGTC	4 cut(s)	292, 450, 868, 897
PpsI	GAGTC	4 cut(s)	292, 450, 868, 897
PpuMI	RGGWCCY	1 cut(s)	51
Psp5II	RGGWCCY	1 cut(s)	51
Psp6I	CCWGG	6 cut(s)	6, 178, 404, 464, 495, 844
PspFI	CCCAGC	1 cut(s)	759
PspGI	CCWGG	6 cut(s)	6, 178, 404, 464, 495, 844
PspPI	GGNCC	7 cut(s)	4, 51, 288, 499, 561, 687, 1363
PspPPI	RGGWCCY	1 cut(s)	51
PsuI	RGATCY	4 cut(s)	175, 183, 659, 1210
PvuI	CGATCG	1 cut(s)	420
RsaI	GTAC	5 cut(s)	511, 642, 667, 832, 1332
RsaNI	GTAC	5 cut(s)	510, 641, 666, 831, 1331
SapI	GCTCTTC	1 cut(s)	692
SaqAI	TTAA	2 cut(s)	1389, 1405
SatI	GCNGC	6 cut(s)	365, 538, 726, 754, 757, 882
Sau96I	GGNCC	7 cut(s)	4, 51, 288, 499, 561, 687, 1363
ScaI	AGTACT	1 cut(s)	642
SchI	GAGTC	4 cut(s)	292, 451, 868, 897
ScrFI	CCNGG	7 cut(s)	8, 180, 336, 406, 466, 497, 846
SduI	GDGCHC	1 cut(s)	924
SfaNI	GCATC	4 cut(s)	203, 321, 332, 1058
SfcI	CTRYAG	1 cut(s)	1326
SinI	GGWCC	5 cut(s)	4, 51, 288, 687, 1363
SmlI	CTYRAG	1 cut(s)	876
SmoI	CTYRAG	1 cut(s)	876
SphI	GCATGC	1 cut(s)	1276
Sse9I	AATT	3 cut(s)	93, 951, 1320
SsiI	CCGC	8 cut(s)	490, 540, 590, 598, 676, 753, 757, 965
SspMI	CTAG	5 cut(s)	663, 1127, 1205, 1262, 1373
StyD4I	CCNGG	7 cut(s)	6, 178, 334, 404, 464, 495, 844
StyI	CCWWGG	3 cut(s)	313, 670, 683
TaaI	ACNGT	5 cut(s)	778, 1017, 1186, 1330, 1381
TaiI	ACGT	1 cut(s)	586
TaqI	TCGA	7 cut(s)	47, 56, 101, 329, 416, 452, 605
TaqII	GACCGA	1 cut(s)	1380
TasI	AATT	3 cut(s)	93, 951, 1320
TatI	WGTACW	2 cut(s)	509, 640
TauI	GCSGC	2 cut(s)	756, 759
TfiI	GAWTC	3 cut(s)	326, 1094, 1118
Tru1I	TTAA	2 cut(s)	1389, 1405
Tru9I	TTAA	2 cut(s)	1389, 1405
TscAI	CASTG	2 cut(s)	231, 783
TseFI	GTSAC	1 cut(s)	158
TseI	GCWGC	4 cut(s)	364, 537, 725, 881
Tsp45I	GTSAC	1 cut(s)	158
TspDTI	ATGAA	2 cut(s)	70, 801
TspRI	CASTG	2 cut(s)	231, 783
Van91I	CCANNNNNTGG	2 cut(s)	284, 1400
VpaK11BI	GGWCC	5 cut(s)	4, 51, 288, 687, 1363
XapI	RAATTY	1 cut(s)	951
XbaI	TCTAGA	1 cut(s)	1126
XceI	RCATGY	1 cut(s)	1276
XmnI	GAANNNNTTC	1 cut(s)	1122
XspI	CTAG	5 cut(s)	663, 1127, 1205, 1262, 1373
ZrmI	AGTACT	1 cut(s)	642
Zsp2I	ATGCAT	1 cut(s)	818

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.