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| Species | Orthologous Gene IDs |
|---|---|
| malus_domestica | MD00G1080500.v1.1 MD16G1285200.v1.1 |
| rosa_chinensis | RchiOBHm_Chr2g0175261 RchiOBHm_Chr6g0280801 |
| rosa_laevigata | RLG00000013082 RLG00000019605 RLG00000033344 RLG00000034484 RLG00000036984 |
| rosa_multiflora | Rmu_sc0000893.1_g000002 Rmu_sc0002494.1_g000006 Rmu_sc0007139.1_g000001 |
| rosa_roxburghii | Rroxscaffold_4G00312410 Rroxscaffold_7G00187620 |
| rosa_rugosa | Rorug01G0060900 Rorug02G0158200 Rorug02G0250000 Rorug06G0134700 |
| rosa_samantha | Rh1AG184800 Rh1AG199900 Rh1AG262300 Rh1BG097700 Rh1BG103100 Rh2CG636900 Rh2DG687600 Rh3CG050700 Rh3DG112000 Rh4CG020800 Rh4CG194300 Rh4DG079900 Rh5AG202600 Rh5BG321300 Rh5CG365700 Rh6AG170000 Rh6CG250600 Rh6DG242200 Rh6DG280400 Rh7AG279500 Rh7CG298700 Rh7CG343600 Rh7DG079500 |
| rosa_wichuraiana | Rw4G014860 Rw6G026540 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 1842, 1944 |
| Acc36I | ACCTGC | 1 cut(s) | 133 |
| AccB1I | GGYRCC | 1 cut(s) | 790 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 837 |
| AccII | CGCG | 3 cut(s) | 196, 999, 1188 |
| AciI | CCGC | 9 cut(s) | 59, 194, 239, 263, 428, 997, 1188, 1457, 1539 |
| AclWI | GGATC | 3 cut(s) | 700, 924, 1661 |
| AcoI | YGGCCR | 1 cut(s) | 1477 |
| AcsI | RAATTY | 2 cut(s) | 1087, 1602 |
| AcuI | CTGAAG | 3 cut(s) | 165, 1128, 1146 |
| AfaI | GTAC | 3 cut(s) | 872, 1185, 1931 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 139, 183, 684, 837 |
| AflII | CTTAAG | 3 cut(s) | 46, 392, 557 |
| AgsI | TTSAA | 7 cut(s) | 605, 850, 978, 1093, 1519, 1529, 1898 |
| AjnI | CCWGG | 2 cut(s) | 1071, 1479 |
| Alw26I | GTCTC | 2 cut(s) | 1873, 1886 |
| AlwI | GGATC | 3 cut(s) | 700, 924, 1661 |
| AoxI | GGCC | 1 cut(s) | 1477 |
| ApeKI | GCWGC | 9 cut(s) | 218, 242, 272, 407, 437, 659, 827, 1373, 1485 |
| ApoI | RAATTY | 2 cut(s) | 1087, 1602 |
| ArsI | GACNNNNNNTTYG | 6 cut(s) | 293, 323, 325, 355, 488, 520 |
| AseI | ATTAAT | 1 cut(s) | 1743 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 956, 1389 |
| AspA2I | CCTAGG | 1 cut(s) | 182 |
| AspS9I | GGNCC | 2 cut(s) | 1573, 2039 |
| AsuC2I | CCSGG | 1 cut(s) | 1176 |
| AsuHPI | GGTGA | 3 cut(s) | 634, 1723, 2059 |
| AvaII | GGWCC | 2 cut(s) | 1573, 2039 |
| AvrII | CCTAGG | 1 cut(s) | 182 |
| BalI | TGGCCA | 1 cut(s) | 1479 |
| BanI | GGYRCC | 1 cut(s) | 790 |
| BbsI | GAAGAC | 1 cut(s) | 1707 |
| BbvCI | CCTCAGC | 1 cut(s) | 1317 |
| BbvI | GCAGC | 9 cut(s) | 205, 229, 284, 394, 449, 671, 814, 1385, 1497 |
| BccI | CCATC | 7 cut(s) | 16, 397, 562, 632, 1339, 1409, 1607 |
| BcgI | CGANNNNNNTGC | 1 cut(s) | 37 |
| BciT130I | CCWGG | 2 cut(s) | 1073, 1481 |
| BciVI | GTATCC | 1 cut(s) | 1044 |
| BcnI | CCSGG | 1 cut(s) | 1176 |
| BcoDI | GTCTC | 2 cut(s) | 1873, 1886 |
| BfaI | CTAG | 8 cut(s) | 33, 183, 228, 591, 887, 1289, 1362, 1494 |
| BfmI | CTRYAG | 2 cut(s) | 39, 1933 |
| BfrI | CTTAAG | 3 cut(s) | 46, 392, 557 |
| BfuAI | ACCTGC | 1 cut(s) | 133 |
| BfuI | GTATCC | 1 cut(s) | 1044 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 170 |
| BglII | AGATCT | 2 cut(s) | 35, 1821 |
| BlnI | CCTAGG | 1 cut(s) | 182 |
| BmcAI | AGTACT | 1 cut(s) | 1931 |
| Bme1390I | CCNGG | 3 cut(s) | 1073, 1176, 1481 |
| Bme18I | GGWCC | 2 cut(s) | 1573, 2039 |
| BmgT120I | GGNCC | 2 cut(s) | 1573, 2039 |
| BmiI | GGNNCC | 4 cut(s) | 6, 645, 792, 1659 |
| BmrFI | CCNGG | 3 cut(s) | 1073, 1176, 1481 |
| BmsI | GCATC | 8 cut(s) | 226, 305, 470, 660, 769, 830, 1416, 1991 |
| BpiI | GAAGAC | 1 cut(s) | 1707 |
| BpmI | CTGGAG | 2 cut(s) | 900, 1846 |
| Bpu10I | CCTNAGC | 2 cut(s) | 663, 1317 |
| BpuMI | CCSGG | 1 cut(s) | 1176 |
| Bsa29I | ATCGAT | 1 cut(s) | 928 |
| BsaBI | GATNNNNATC | 1 cut(s) | 924 |
| BsaJI | CCNNGG | 6 cut(s) | 182, 345, 510, 1480, 1680, 2035 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 659, 689, 1016, 1046 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 139, 183, 684, 837 |
| Bse1I | ACTGG | 8 cut(s) | 319, 379, 484, 544, 816, 872, 1086, 1791 |
| Bse3DI | GCAATG | 2 cut(s) | 1311, 2066 |
| Bse8I | GATNNNNATC | 1 cut(s) | 924 |
| BseBI | CCWGG | 2 cut(s) | 1073, 1481 |
| BseCI | ATCGAT | 1 cut(s) | 928 |
| BseDI | CCNNGG | 6 cut(s) | 182, 345, 510, 1480, 1680, 2035 |
| BseJI | GATNNNNATC | 1 cut(s) | 924 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 139, 183, 684, 837 |
| BseMI | GCAATG | 2 cut(s) | 1311, 2066 |
| BseMII | CTCAG | 4 cut(s) | 236, 1158, 1308, 1868 |
| BseNI | ACTGG | 8 cut(s) | 319, 379, 484, 544, 816, 872, 1086, 1791 |
| BseRI | GAGGAG | 4 cut(s) | 1310, 1607, 1664, 1667 |
| BseXI | GCAGC | 9 cut(s) | 205, 229, 284, 394, 449, 671, 814, 1385, 1497 |
| BsgI | GTGCAG | 1 cut(s) | 83 |
| Bsh1236I | CGCG | 3 cut(s) | 196, 999, 1188 |
| Bsh1285I | CGRYCG | 3 cut(s) | 200, 263, 428 |
| BshFI | GGCC | 1 cut(s) | 1479 |
| BshNI | GGYRCC | 1 cut(s) | 790 |
| BshVI | ATCGAT | 1 cut(s) | 928 |
| BsiEI | CGRYCG | 3 cut(s) | 200, 263, 428 |
| BsiSI | CCGG | 1 cut(s) | 1176 |
| BslFI | GGGAC | 1 cut(s) | 1158 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 139, 183, 684, 837 |
| BsmAI | GTCTC | 2 cut(s) | 1873, 1886 |
| BsmFI | GGGAC | 1 cut(s) | 1158 |
| BsnI | GGCC | 1 cut(s) | 1479 |
| Bsp143I | GATC | 6 cut(s) | 35, 197, 705, 929, 1666, 1821 |
| BspACI | CCGC | 9 cut(s) | 59, 194, 239, 263, 428, 997, 1188, 1457, 1539 |
| BspANI | GGCC | 1 cut(s) | 1479 |
| BspCNI | CTCAG | 4 cut(s) | 235, 1159, 1309, 1869 |
| BspDI | ATCGAT | 1 cut(s) | 928 |
| BspFNI | CGCG | 3 cut(s) | 196, 999, 1188 |
| BspLI | GGNNCC | 4 cut(s) | 6, 645, 792, 1659 |
| BspMAI | CTGCAG | 1 cut(s) | 1937 |
| BspMI | ACCTGC | 1 cut(s) | 133 |
| BspPI | GGATC | 3 cut(s) | 700, 924, 1661 |
| BspT107I | GGYRCC | 1 cut(s) | 790 |
| BspTI | CTTAAG | 3 cut(s) | 46, 392, 557 |
| BsrDI | GCAATG | 2 cut(s) | 1311, 2066 |
| BsrI | ACTGG | 8 cut(s) | 319, 379, 484, 544, 816, 872, 1086, 1791 |
| BssECI | CCNNGG | 6 cut(s) | 182, 345, 510, 1480, 1680, 2035 |
| BssMI | GATC | 6 cut(s) | 35, 197, 705, 929, 1666, 1821 |
| BssT1I | CCWWGG | 3 cut(s) | 182, 1680, 2035 |
| Bst2UI | CCWGG | 2 cut(s) | 1073, 1481 |
| Bst4CI | ACNGT | 3 cut(s) | 88, 909, 1852 |
| Bst6I | CTCTTC | 3 cut(s) | 1088, 1908, 2021 |
| BstAFI | CTTAAG | 3 cut(s) | 46, 392, 557 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 827 |
| BstC8I | GCNNGC | 3 cut(s) | 16, 697, 1431 |
| BstDEI | CTNAG | 6 cut(s) | 222, 663, 1167, 1317, 1877, 2085 |
| BstEII | GGTNACC | 1 cut(s) | 571 |
| BstFNI | CGCG | 3 cut(s) | 196, 999, 1188 |
| BstKTI | GATC | 6 cut(s) | 38, 200, 708, 932, 1669, 1824 |
| BstMAI | GTCTC | 2 cut(s) | 1873, 1886 |
| BstMBI | GATC | 6 cut(s) | 35, 197, 705, 929, 1666, 1821 |
| BstMCI | CGRYCG | 3 cut(s) | 200, 263, 428 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 11, 170, 215, 827, 1485, 1547, 1862 |
| BstNI | CCWGG | 2 cut(s) | 1073, 1481 |
| BstPI | GGTNACC | 1 cut(s) | 571 |
| BstSCI | CCNGG | 3 cut(s) | 1071, 1174, 1479 |
| BstSFI | CTRYAG | 2 cut(s) | 39, 1933 |
| BstUI | CGCG | 3 cut(s) | 196, 999, 1188 |
| BstV1I | GCAGC | 9 cut(s) | 205, 229, 284, 394, 449, 671, 814, 1385, 1497 |
| BstV2I | GAAGAC | 1 cut(s) | 1707 |
| BstX2I | RGATCY | 3 cut(s) | 35, 705, 1821 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 801 |
| BstYI | RGATCY | 3 cut(s) | 35, 705, 1821 |
| Bsu15I | ATCGAT | 1 cut(s) | 928 |
| BsuI | GTATCC | 1 cut(s) | 1044 |
| BsuRI | GGCC | 1 cut(s) | 1479 |
| BsuTUI | ATCGAT | 1 cut(s) | 928 |
| BtsI | GCAGTG | 1 cut(s) | 1674 |
| BtsIMutI | CAGTG | 4 cut(s) | 372, 537, 1674, 1784 |
| BveI | ACCTGC | 1 cut(s) | 133 |
| Cac8I | GCNNGC | 3 cut(s) | 16, 697, 1431 |
| Cfr13I | GGNCC | 2 cut(s) | 1573, 2039 |
| ClaI | ATCGAT | 1 cut(s) | 928 |
| Csp6I | GTAC | 3 cut(s) | 871, 1184, 1930 |
| CviAII | CATG | 1 cut(s) | 577 |
| CviQI | GTAC | 3 cut(s) | 871, 1184, 1930 |
| DdeI | CTNAG | 6 cut(s) | 222, 663, 1167, 1317, 1877, 2085 |
| DpnI | GATC | 6 cut(s) | 37, 199, 707, 931, 1668, 1823 |
| DpnII | GATC | 6 cut(s) | 35, 197, 705, 929, 1666, 1821 |
| EaeI | YGGCCR | 1 cut(s) | 1477 |
| Eam1104I | CTCTTC | 3 cut(s) | 1088, 1908, 2021 |
| EarI | CTCTTC | 3 cut(s) | 1088, 1908, 2021 |
| Eco130I | CCWWGG | 3 cut(s) | 182, 1680, 2035 |
| Eco47I | GGWCC | 2 cut(s) | 1573, 2039 |
| Eco57I | CTGAAG | 3 cut(s) | 165, 1128, 1146 |
| Eco91I | GGTNACC | 1 cut(s) | 571 |
| EcoO65I | GGTNACC | 1 cut(s) | 571 |
| EcoRII | CCWGG | 2 cut(s) | 1071, 1479 |
| EcoT14I | CCWWGG | 3 cut(s) | 182, 1680, 2035 |
| ErhI | CCWWGG | 3 cut(s) | 182, 1680, 2035 |
| FaeI | CATG | 1 cut(s) | 580 |
| FalI | AAGNNNNNCTT | 3 cut(s) | 1360, 1392, 2068 |
| FaqI | GGGAC | 1 cut(s) | 1158 |
| FatI | CATG | 1 cut(s) | 576 |
| FspBI | CTAG | 8 cut(s) | 33, 183, 228, 591, 887, 1289, 1362, 1494 |
| GsuI | CTGGAG | 2 cut(s) | 900, 1846 |
| HaeIII | GGCC | 1 cut(s) | 1479 |
| HapII | CCGG | 1 cut(s) | 1176 |
| Hin1II | CATG | 1 cut(s) | 580 |
| HincII | GTYRAC | 1 cut(s) | 312 |
| HindII | GTYRAC | 1 cut(s) | 312 |
| HinfI | GANTC | 8 cut(s) | 350, 515, 580, 1390, 1436, 1689, 1712, 1879 |
| HpaII | CCGG | 1 cut(s) | 1176 |
| HphI | GGTGA | 3 cut(s) | 634, 1723, 2059 |
| Hpy166II | GTNNAC | 2 cut(s) | 122, 312 |
| Hpy188III | TCNNGA | 8 cut(s) | 776, 850, 887, 896, 917, 1166, 1695, 1825 |
| Hpy8I | GTNNAC | 2 cut(s) | 122, 312 |
| HpyCH4III | ACNGT | 3 cut(s) | 88, 909, 1852 |
| HpyCH4IV | ACGT | 3 cut(s) | 73, 956, 1761 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 11, 170, 215, 827, 1485, 1547, 1862 |
| HpyF3I | CTNAG | 6 cut(s) | 222, 663, 1167, 1317, 1877, 2085 |
| HpySE526I | ACGT | 3 cut(s) | 73, 956, 1761 |
| Hsp92II | CATG | 1 cut(s) | 580 |
| Kzo9I | GATC | 6 cut(s) | 35, 197, 705, 929, 1666, 1821 |
| LmnI | GCTCC | 6 cut(s) | 10, 643, 1348, 1618, 1663, 1827 |
| Lsp1109I | GCAGC | 9 cut(s) | 205, 229, 284, 394, 449, 671, 814, 1385, 1497 |
| LweI | GCATC | 8 cut(s) | 226, 305, 470, 660, 769, 830, 1416, 1991 |
| MaeI | CTAG | 8 cut(s) | 33, 183, 228, 591, 887, 1289, 1362, 1494 |
| MaeII | ACGT | 3 cut(s) | 73, 956, 1761 |
| MaeIII | GTNAC | 6 cut(s) | 370, 535, 571, 1047, 1450, 1729 |
| MalI | GATC | 6 cut(s) | 37, 199, 707, 931, 1668, 1823 |
| MboI | GATC | 6 cut(s) | 35, 197, 705, 929, 1666, 1821 |
| MboII | GAAGA | 9 cut(s) | 817, 1088, 1105, 1268, 1294, 1394, 1707, 1925, 2008 |
| MfeI | CAATTG | 2 cut(s) | 648, 1905 |
| MflI | RGATCY | 3 cut(s) | 35, 705, 1821 |
| MlsI | TGGCCA | 1 cut(s) | 1479 |
| MluNI | TGGCCA | 1 cut(s) | 1479 |
| MlyI | GAGTC | 3 cut(s) | 1430, 1721, 1888 |
| MmeI | TCCRAC | 1 cut(s) | 1320 |
| Mox20I | TGGCCA | 1 cut(s) | 1479 |
| MroXI | GAANNNNTTC | 2 cut(s) | 956, 1389 |
| MscI | TGGCCA | 1 cut(s) | 1479 |
| MseI | TTAA | 7 cut(s) | 47, 393, 558, 1278, 1743, 1919, 2067 |
| Msp20I | TGGCCA | 1 cut(s) | 1479 |
| MspA1I | CMGCKG | 4 cut(s) | 827, 1433, 1459, 1488 |
| MspCI | CTTAAG | 3 cut(s) | 46, 392, 557 |
| MspI | CCGG | 1 cut(s) | 1176 |
| MspR9I | CCNGG | 3 cut(s) | 1073, 1176, 1481 |
| MunI | CAATTG | 2 cut(s) | 648, 1905 |
| MvaI | CCWGG | 2 cut(s) | 1073, 1481 |
| MvnI | CGCG | 3 cut(s) | 196, 999, 1188 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 11, 170, 215, 827, 1485, 1547, 1862 |
| NciI | CCSGG | 1 cut(s) | 1176 |
| NdeII | GATC | 6 cut(s) | 35, 197, 705, 929, 1666, 1821 |
| NlaIII | CATG | 1 cut(s) | 580 |
| NlaIV | GGNNCC | 4 cut(s) | 6, 645, 792, 1659 |
| NmuCI | GTSAC | 5 cut(s) | 370, 535, 1047, 1450, 1729 |
| PdmI | GAANNNNTTC | 2 cut(s) | 956, 1389 |
| PfeI | GAWTC | 5 cut(s) | 350, 515, 580, 1390, 1689 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 837 |
| PfoI | TCCNGGA | 1 cut(s) | 1071 |
| Ple19I | CGATCG | 1 cut(s) | 200 |
| PleI | GAGTC | 3 cut(s) | 1430, 1720, 1887 |
| PpsI | GAGTC | 3 cut(s) | 1430, 1720, 1887 |
| PshBI | ATTAAT | 1 cut(s) | 1743 |
| PsiI | TTATAA | 2 cut(s) | 1842, 1944 |
| Psp6I | CCWGG | 2 cut(s) | 1071, 1479 |
| PspEI | GGTNACC | 1 cut(s) | 571 |
| PspGI | CCWGG | 2 cut(s) | 1071, 1479 |
| PspN4I | GGNNCC | 4 cut(s) | 6, 645, 792, 1659 |
| PspPI | GGNCC | 2 cut(s) | 1573, 2039 |
| PstI | CTGCAG | 1 cut(s) | 1937 |
| PsuI | RGATCY | 3 cut(s) | 35, 705, 1821 |
| PvuI | CGATCG | 1 cut(s) | 200 |
| PvuII | CAGCTG | 3 cut(s) | 827, 1433, 1488 |
| RsaI | GTAC | 3 cut(s) | 872, 1185, 1931 |
| RsaNI | GTAC | 3 cut(s) | 871, 1184, 1930 |
| SaqAI | TTAA | 7 cut(s) | 47, 393, 558, 1278, 1743, 1919, 2067 |
| Sau3AI | GATC | 6 cut(s) | 35, 197, 705, 929, 1666, 1821 |
| Sau96I | GGNCC | 2 cut(s) | 1573, 2039 |
| ScaI | AGTACT | 1 cut(s) | 1931 |
| SchI | GAGTC | 3 cut(s) | 1430, 1721, 1888 |
| ScrFI | CCNGG | 3 cut(s) | 1073, 1176, 1481 |
| SfaNI | GCATC | 8 cut(s) | 226, 305, 470, 660, 769, 830, 1416, 1991 |
| SfcI | CTRYAG | 2 cut(s) | 39, 1933 |
| SinI | GGWCC | 2 cut(s) | 1573, 2039 |
| SmlI | CTYRAG | 3 cut(s) | 46, 392, 557 |
| SmoI | CTYRAG | 3 cut(s) | 46, 392, 557 |
| SsiI | CCGC | 9 cut(s) | 59, 194, 239, 263, 428, 997, 1188, 1457, 1539 |
| SspMI | CTAG | 8 cut(s) | 33, 183, 228, 591, 887, 1289, 1362, 1494 |
| StyD4I | CCNGG | 3 cut(s) | 1071, 1174, 1479 |
| StyI | CCWWGG | 3 cut(s) | 182, 1680, 2035 |
| TaaI | ACNGT | 3 cut(s) | 88, 909, 1852 |
| TaiI | ACGT | 3 cut(s) | 76, 959, 1764 |
| TaqI | TCGA | 5 cut(s) | 23, 200, 583, 928, 1042 |
| TatI | WGTACW | 1 cut(s) | 1929 |
| TauI | GCSGC | 2 cut(s) | 242, 1541 |
| TfiI | GAWTC | 5 cut(s) | 350, 515, 580, 1390, 1689 |
| Tru1I | TTAA | 7 cut(s) | 47, 393, 558, 1278, 1743, 1919, 2067 |
| Tru9I | TTAA | 7 cut(s) | 47, 393, 558, 1278, 1743, 1919, 2067 |
| TscAI | CASTG | 4 cut(s) | 379, 544, 1681, 1791 |
| TseFI | GTSAC | 5 cut(s) | 370, 535, 1047, 1450, 1729 |
| TseI | GCWGC | 9 cut(s) | 218, 242, 272, 407, 437, 659, 827, 1373, 1485 |
| Tsp45I | GTSAC | 5 cut(s) | 370, 535, 1047, 1450, 1729 |
| TspDTI | ATGAA | 6 cut(s) | 83, 593, 762, 960, 1214, 1614 |
| TspGWI | ACGGA | 1 cut(s) | 1066 |
| TspRI | CASTG | 4 cut(s) | 379, 544, 1681, 1791 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 837 |
| Vha464I | CTTAAG | 3 cut(s) | 46, 392, 557 |
| VpaK11BI | GGWCC | 2 cut(s) | 1573, 2039 |
| VspI | ATTAAT | 1 cut(s) | 1743 |
| XapI | RAATTY | 2 cut(s) | 1087, 1602 |
| XbaI | TCTAGA | 1 cut(s) | 886 |
| XcmI | CCANNNNNNNNNTGG | 3 cut(s) | 289, 454, 1336 |
| XmaJI | CCTAGG | 1 cut(s) | 182 |
| XmnI | GAANNNNTTC | 2 cut(s) | 956, 1389 |
| XspI | CTAG | 8 cut(s) | 33, 183, 228, 591, 887, 1289, 1362, 1494 |
| ZrmI | AGTACT | 1 cut(s) | 1931 |