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| Species | Orthologous Gene IDs |
|---|---|
| malus_domestica | MD00G1080500.v1.1 MD16G1285200.v1.1 |
| rosa_chinensis | RchiOBHm_Chr2g0175261 RchiOBHm_Chr6g0280801 |
| rosa_laevigata | RLG00000013082 RLG00000019605 RLG00000033344 RLG00000034484 RLG00000036984 |
| rosa_multiflora | Rmu_sc0000893.1_g000002 Rmu_sc0002494.1_g000006 Rmu_sc0007139.1_g000001 |
| rosa_roxburghii | Rroxscaffold_4G00312410 Rroxscaffold_7G00187620 |
| rosa_rugosa | Rorug01G0060900 Rorug02G0158200 Rorug02G0250000 Rorug06G0134700 |
| rosa_samantha | Rh1AG184800 Rh1AG199900 Rh1AG262300 Rh1BG097700 Rh1BG103100 Rh2CG636900 Rh2DG687600 Rh3CG050700 Rh3DG112000 Rh4CG020800 Rh4CG194300 Rh4DG079900 Rh5AG202600 Rh5BG321300 Rh5CG365700 Rh6AG170000 Rh6CG250600 Rh6DG242200 Rh6DG280400 Rh7AG279500 Rh7CG298700 Rh7CG343600 Rh7DG079500 |
| rosa_wichuraiana | Rw4G014860 Rw6G026540 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 147 |
| AdeI | CACNNNGTG | 1 cut(s) | 289 |
| AgsI | TTSAA | 1 cut(s) | 101 |
| AluBI | AGCT | 1 cut(s) | 105 |
| AluI | AGCT | 1 cut(s) | 105 |
| Alw21I | GWGCWC | 1 cut(s) | 283 |
| Alw26I | GTCTC | 2 cut(s) | 76, 89 |
| ApeKI | GCWGC | 2 cut(s) | 56, 135 |
| AsuHPI | GGTGA | 1 cut(s) | 178 |
| Bbv12I | GWGCWC | 1 cut(s) | 283 |
| BbvI | GCAGC | 2 cut(s) | 43, 122 |
| BccI | CCATC | 1 cut(s) | 253 |
| BcoDI | GTCTC | 2 cut(s) | 76, 89 |
| BfmI | CTRYAG | 1 cut(s) | 136 |
| BglII | AGATCT | 1 cut(s) | 24 |
| BisI | GCNGC | 2 cut(s) | 57, 136 |
| BlsI | GCNGC | 2 cut(s) | 58, 137 |
| BpmI | CTGGAG | 1 cut(s) | 49 |
| Bse3DI | GCAATG | 1 cut(s) | 185 |
| BseMI | GCAATG | 1 cut(s) | 185 |
| BseMII | CTCAG | 1 cut(s) | 71 |
| BseXI | GCAGC | 2 cut(s) | 43, 122 |
| BsiHKAI | GWGCWC | 1 cut(s) | 283 |
| BsmAI | GTCTC | 2 cut(s) | 76, 89 |
| BsmI | GAATGC | 1 cut(s) | 221 |
| Bsp1286I | GDGCHC | 1 cut(s) | 283 |
| Bsp143I | GATC | 1 cut(s) | 24 |
| BspCNI | CTCAG | 1 cut(s) | 72 |
| BspHI | TCATGA | 1 cut(s) | 225 |
| BspMAI | CTGCAG | 1 cut(s) | 140 |
| BsrDI | GCAATG | 1 cut(s) | 185 |
| BssMI | GATC | 1 cut(s) | 24 |
| Bst4CI | ACNGT | 1 cut(s) | 289 |
| Bst6I | CTCTTC | 1 cut(s) | 111 |
| BstDEI | CTNAG | 1 cut(s) | 80 |
| BstKTI | GATC | 1 cut(s) | 27 |
| BstMAI | GTCTC | 2 cut(s) | 76, 89 |
| BstMBI | GATC | 1 cut(s) | 24 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 65 |
| BstSFI | CTRYAG | 1 cut(s) | 136 |
| BstV1I | GCAGC | 2 cut(s) | 43, 122 |
| BstX2I | RGATCY | 1 cut(s) | 24 |
| BstYI | RGATCY | 1 cut(s) | 24 |
| BtsIMutI | CAGTG | 1 cut(s) | 285 |
| CciI | TCATGA | 1 cut(s) | 225 |
| CviAII | CATG | 3 cut(s) | 226, 233, 242 |
| CviJI | RGCY | 4 cut(s) | 105, 172, 231, 303 |
| CviKI_1 | RGCY | 4 cut(s) | 105, 172, 231, 303 |
| DdeI | CTNAG | 1 cut(s) | 80 |
| DpnI | GATC | 1 cut(s) | 26 |
| DpnII | GATC | 1 cut(s) | 24 |
| DraIII | CACNNNGTG | 1 cut(s) | 289 |
| Eam1104I | CTCTTC | 1 cut(s) | 111 |
| EarI | CTCTTC | 1 cut(s) | 111 |
| FaeI | CATG | 3 cut(s) | 229, 236, 245 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 187, 219 |
| FatI | CATG | 3 cut(s) | 225, 232, 241 |
| Fnu4HI | GCNGC | 2 cut(s) | 57, 136 |
| Fsp4HI | GCNGC | 2 cut(s) | 57, 136 |
| GluI | GCNGC | 2 cut(s) | 57, 136 |
| GsuI | CTGGAG | 1 cut(s) | 49 |
| Hin1II | CATG | 3 cut(s) | 229, 236, 245 |
| HinfI | GANTC | 1 cut(s) | 82 |
| HphI | GGTGA | 1 cut(s) | 178 |
| Hpy166II | GTNNAC | 1 cut(s) | 292 |
| Hpy188I | TCNGA | 1 cut(s) | 76 |
| Hpy188III | TCNNGA | 2 cut(s) | 28, 226 |
| Hpy8I | GTNNAC | 1 cut(s) | 292 |
| HpyCH4III | ACNGT | 1 cut(s) | 289 |
| HpyCH4IV | ACGT | 1 cut(s) | 294 |
| HpyCH4V | TGCA | 3 cut(s) | 138, 221, 314 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 65 |
| HpyF3I | CTNAG | 1 cut(s) | 80 |
| HpySE526I | ACGT | 1 cut(s) | 294 |
| Hsp92II | CATG | 3 cut(s) | 229, 236, 245 |
| Kzo9I | GATC | 1 cut(s) | 24 |
| LmnI | GCTCC | 1 cut(s) | 30 |
| LpnPI | CCDG | 1 cut(s) | 13 |
| Lsp1109I | GCAGC | 2 cut(s) | 43, 122 |
| MaeII | ACGT | 1 cut(s) | 294 |
| MalI | GATC | 1 cut(s) | 26 |
| MboI | GATC | 1 cut(s) | 24 |
| MboII | GAAGA | 1 cut(s) | 128 |
| MfeI | CAATTG | 2 cut(s) | 108, 270 |
| MflI | RGATCY | 1 cut(s) | 24 |
| MhlI | GDGCHC | 1 cut(s) | 283 |
| MluCI | AATT | 2 cut(s) | 108, 270 |
| MlyI | GAGTC | 1 cut(s) | 91 |
| MnlI | CCTC | 3 cut(s) | 106, 201, 259 |
| MseI | TTAA | 2 cut(s) | 122, 186 |
| MunI | CAATTG | 2 cut(s) | 108, 270 |
| Mva1269I | GAATGC | 1 cut(s) | 221 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 65 |
| NdeII | GATC | 1 cut(s) | 24 |
| NlaIII | CATG | 3 cut(s) | 229, 236, 245 |
| PagI | TCATGA | 1 cut(s) | 225 |
| PctI | GAATGC | 1 cut(s) | 221 |
| PkrI | GCNGC | 2 cut(s) | 58, 137 |
| PleI | GAGTC | 1 cut(s) | 90 |
| PpsI | GAGTC | 1 cut(s) | 90 |
| PsiI | TTATAA | 1 cut(s) | 147 |
| PstI | CTGCAG | 1 cut(s) | 140 |
| PsuI | RGATCY | 1 cut(s) | 24 |
| SaqAI | TTAA | 2 cut(s) | 122, 186 |
| SatI | GCNGC | 2 cut(s) | 57, 136 |
| Sau3AI | GATC | 1 cut(s) | 24 |
| SchI | GAGTC | 1 cut(s) | 91 |
| SduI | GDGCHC | 1 cut(s) | 283 |
| SetI | ASST | 3 cut(s) | 107, 168, 297 |
| SfcI | CTRYAG | 1 cut(s) | 136 |
| SgeI | CNNG | 8 cut(s) | 26, 40, 85, 216, 238, 245, 254, 268 |
| Sse9I | AATT | 2 cut(s) | 108, 270 |
| TaaI | ACNGT | 1 cut(s) | 289 |
| TaiI | ACGT | 1 cut(s) | 297 |
| TasI | AATT | 2 cut(s) | 108, 270 |
| Tru1I | TTAA | 2 cut(s) | 122, 186 |
| Tru9I | TTAA | 2 cut(s) | 122, 186 |
| TscAI | CASTG | 1 cut(s) | 292 |
| TseI | GCWGC | 2 cut(s) | 56, 135 |
| TspDTI | ATGAA | 3 cut(s) | 214, 249, 295 |
| TspRI | CASTG | 1 cut(s) | 292 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 239 |