Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0003673.1

Orthogroup ID

OG0004146

Physical Location & Seq

Genomic Coordinates Reverse (-)

26443 .. 35175

Gene Structure 8733 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0003673.1_g000011.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1539 bp

atgcgcatgcatcctcacttcagataccaactggtcacggtttgttcagccgaggacccgttccacaaaaccctctccgagaaggtttcgaaggtcgagagagagggcaaccaggtccccgctgtgaagaaagccggggccgccaagacgattaacattgacttcaagaggtttacatttgaacatggttttgttgtagtgaacgcgctgaagcttgagaaggcttcgatcgagaaagaccttcaagcaacgatcagcggctccgttaacaaggaggcgttacgtcaggctgtggttaatactctggagcgctgtttgttttatattccgtctttcaagatttacagcggcggtgctggcctctacgactacggccctccgggtttcgccgtcaagtccaatgtcctaggcttttggattcagcattttttgcttgaagagaacaagttcgaagatgaggcatctgggacttgctacagatctgatcacttgctcaaggattactgtaaagataagcttcaaagggacatcacaattacttcagagatggcagtggaactgaaagaaacacacaaggaatcctctctcgcatccttatccattcaacctcctgtttcaaacatcagttggtctttctggtgtgagcaccggatatcacctcgccaaggtcttttgagggtccgtgaatttacccttgcggagattgagcactttgttgaccctgaagacaaatctcagccaaaattctctgatgttgcacatttggagtttcttatgttcccaagggatgaacagaagcctggccattctgcaaggataatctcactaggtgaagccgtatcttctaaggattctaaaattgttgacaacgaaacccttggctactttattgggagagtatacctcttcctcacttgtctgagtatagacaagaaccatttaaggttccggcagcaccttgccaatgaaatggctcactatgctcaggactattgggatgctgagattgagacttcctacgaaagtgctttgggcacccaccgaaatgtgaggtcggcaattcgggtctcttctaatcgaggctctgggttctttgaggcgaagccttggaagttgacaaggactttgaggggcttcgattggggaggcttcgaaggaagacgaggagtttgccggtacgtgacgatgtcaacagacgctgatttcgccttcaccttcaacgacaataacttctctgaccagatagctccggatcaagatcatggtcggctcttcaaggaagctaagatcctcgttgtcctcaacatctcctccgtcttctccttctcgagcctcaaagccaaaggaagtacaaggccgctgaatacatcgttgatcagaataaactcgtccccggccatgatttggcagagacagcgtttgccggctgtggagaaggcggcagaggagccagttcggtctccaggaggtgctgacgatgtcgttttcgtcgatttccgggaggactcattccttcttgctccacggcgatggcgatag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000959 GO:0003674 GO:0003824 GO:0004812 GO:0004820 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005768 GO:0005794 GO:0005802 GO:0005829 GO:0006082 GO:0006139 GO:0006399 GO:0006412 GO:0006418 GO:0006426 GO:0006518 GO:0006520 GO:0006725 GO:0006753 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009117 GO:0009165 GO:0009987 GO:0010035 GO:0010038 GO:0010467 GO:0012505 GO:0015959 GO:0015960 GO:0015965 GO:0015966 GO:0016070 GO:0016874 GO:0016875 GO:0018130 GO:0019438 GO:0019538 GO:0019637 GO:0019752 GO:0031410 GO:0031982 GO:0031984 GO:0032543 GO:0034641 GO:0034645 GO:0034654 GO:0034660 GO:0042221 GO:0043038 GO:0043039 GO:0043043 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0043603 GO:0043604 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044281 GO:0044422 GO:0044424 GO:0044431 GO:0044444 GO:0044446 GO:0044464 GO:0046483 GO:0046686 GO:0046983 GO:0050896 GO:0055086 GO:0070127 GO:0070150 GO:0071704 GO:0090304 GO:0090407 GO:0097708 GO:0098791 GO:0140053 GO:0140098 GO:0140101 GO:1901293 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00970 map00970

Pfam Domains

Protein Families

HGTP_anticodon WHEP-TRS tRNA-synt_2b

Protein Analysis

512

Amino Acids

58.32

Weight (kDa)

8.06

Isoelectric Point (pI)

41.76

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0004146)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G44740 AT3G44740 AT3G44740 AT3G44740 AT3G44740
fragaria_vesca	FvH4_4g22610
pyrus_communis	pycom13g12520
rosa_chinensis	RchiOBHm_Chr6g0269311 RchiOBHm_Chr6g0269321
rosa_laevigata	RLG00000013857 RLG00000015502 RLG00000016357 RLG00000020769 RLG00000027693 RLG00000034245
rosa_multiflora	Rmu_co8414589.1_g000001 Rmu_sc0003673.1_g000011 Rmu_ssc0000291.1_g000006 Rmu_ssc0000291.1_g000008
rosa_roxburghii	Rroxscaffold_2G00113850 Rroxscaffold_7G00198810 Rroxscaffold_7G00198830
rosa_rugosa	Rorug03G0065500
rosa_samantha	Rh3CG264600 Rh3DG260500 Rh4AG284800 Rh4BG290800 Rh4CG306800 Rh6AG167500 Rh6AG167600 Rh6BG172700 Rh6CG166700 Rh6DG158400

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	5
AccB1I	GGYRCC	1 cut(s)	1034
AccB7I	CCANNNNNTGG	1 cut(s)	1404
AccI	GTMKAC	1 cut(s)	900
AccII	CGCG	1 cut(s)	206
AccIII	TCCGGA	1 cut(s)	1249
AciI	CCGC	8 cut(s)	120, 141, 258, 348, 351, 698, 1358, 1439
AclWI	GGATC	2 cut(s)	1260, 1282
AcoI	YGGCCR	2 cut(s)	802, 1395
AcsI	RAATTY	2 cut(s)	686, 743
AcuI	CTGAAG	4 cut(s)	4, 230, 525, 744
AdeI	CACNNNGTG	1 cut(s)	830
AfaI	GTAC	2 cut(s)	1178, 1351
AfeI	AGCGCT	1 cut(s)	311
AfiI	CCNNNNNNNGG	2 cut(s)	665, 1404
AjnI	CCWGG	3 cut(s)	111, 799, 1462
AluBI	AGCT	4 cut(s)	214, 517, 1247, 1283
AluI	AGCT	4 cut(s)	214, 517, 1247, 1283
Alw21I	GWGCWC	2 cut(s)	648, 711
Alw26I	GTCTC	4 cut(s)	1004, 1072, 1405, 1464
AlwI	GGATC	2 cut(s)	1260, 1282
AlwNI	CAGNNNCTG	1 cut(s)	1199
Ama87I	CYCGRG	1 cut(s)	1327
Aor13HI	TCCGGA	1 cut(s)	1249
Aor51HI	AGCGCT	1 cut(s)	311
AoxI	GGCC	6 cut(s)	138, 358, 373, 802, 1355, 1395
ApeKI	GCWGC	1 cut(s)	952
ApoI	RAATTY	2 cut(s)	686, 743
ArsI	GACNNNNNNTTYG	6 cut(s)	1108, 1140, 1152, 1184, 1187, 1219
Asp700I	GAANNNNTTC	1 cut(s)	446
AspA2I	CCTAGG	1 cut(s)	406
AspLEI	GCGC	3 cut(s)	6, 208, 312
AspS9I	GGNCC	5 cut(s)	55, 115, 138, 374, 679
AsuC2I	CCSGG	4 cut(s)	136, 381, 1394, 1499
AsuHPI	GGTGA	3 cut(s)	648, 842, 1204
AsuII	TTCGAA	3 cut(s)	89, 450, 1152
AvaI	CYCGRG	1 cut(s)	1327
AvaII	GGWCC	3 cut(s)	55, 115, 679
AvrII	CCTAGG	1 cut(s)	406
BaeGI	GKGCMC	1 cut(s)	1037
BalI	TGGCCA	1 cut(s)	804
BanI	GGYRCC	1 cut(s)	1034
BbsI	GAAGAC	3 cut(s)	732, 1165, 1309
Bbv12I	GWGCWC	2 cut(s)	648, 711
BbvI	GCAGC	1 cut(s)	964
BccI	CCATC	2 cut(s)	541, 1524
BceAI	ACGGC	3 cut(s)	374, 388, 821
BcgI	CGANNNNNNTGC	2 cut(s)	1152, 1186
BciT130I	CCWGG	3 cut(s)	113, 801, 1464
BclI	TGATCA	2 cut(s)	484, 1374
BcnI	CCSGG	4 cut(s)	136, 381, 1394, 1499
BcoDI	GTCTC	4 cut(s)	1004, 1072, 1405, 1464
BfaI	CTAG	2 cut(s)	407, 827
BfmI	CTRYAG	1 cut(s)	475
BfoI	RGCGCY	1 cut(s)	313
BglII	AGATCT	1 cut(s)	479
BisI	GCNGC	6 cut(s)	141, 259, 349, 953, 1358, 1440
BlnI	CCTAGG	1 cut(s)	406
BlsI	GCNGC	6 cut(s)	142, 260, 350, 954, 1359, 1441
Bme1390I	CCNGG	7 cut(s)	113, 136, 381, 801, 1394, 1464, 1499
Bme18I	GGWCC	3 cut(s)	55, 115, 679
BmeT110I	CYCGRG	1 cut(s)	1327
BmgT120I	GGNCC	5 cut(s)	55, 115, 138, 374, 679
BmiI	GGNNCC	8 cut(s)	57, 117, 139, 262, 680, 947, 1036, 1449
BmrFI	CCNGG	7 cut(s)	113, 136, 381, 801, 1394, 1464, 1499
BmsI	GCATC	4 cut(s)	19, 470, 599, 988
BpiI	GAAGAC	3 cut(s)	732, 1165, 1309
BplI	GAGNNNNNCTC	2 cut(s)	888, 920
BpmI	CTGGAG	2 cut(s)	326, 1446
Bpu10I	CCTNAGC	1 cut(s)	984
Bpu14I	TTCGAA	3 cut(s)	89, 450, 1152
BpuEI	CTTGAG	2 cut(s)	236, 479
BpuMI	CCSGG	4 cut(s)	136, 381, 1394, 1499
BsaAI	YACGTR	1 cut(s)	1180
BsaBI	GATNNNNATC	1 cut(s)	1257
BsaI	GGTCTC	2 cut(s)	1072, 1464
BsaJI	CCNNGG	9 cut(s)	51, 135, 406, 664, 782, 877, 1106, 1392, 1523
BsaWI	WCCGGW	2 cut(s)	648, 1249
BsaXI	ACNNNNNCTCC	2 cut(s)	1295, 1325
Bsc4I	CCNNNNNNNGG	2 cut(s)	665, 1404
Bse118I	RCCGGY	2 cut(s)	1173, 1423
Bse1I	ACTGG	2 cut(s)	36, 1451
Bse8I	GATNNNNATC	1 cut(s)	1257
BseAI	TCCGGA	1 cut(s)	1249
BseBI	CCWGG	3 cut(s)	113, 801, 1464
BseDI	CCNNGG	9 cut(s)	51, 135, 406, 664, 782, 877, 1106, 1392, 1523
BseGI	GGATG	4 cut(s)	10, 590, 793, 1003
BseJI	GATNNNNATC	1 cut(s)	1257
BseLI	CCNNNNNNNGG	2 cut(s)	665, 1404
BseMII	CTCAG	4 cut(s)	749, 911, 993, 998
BseNI	ACTGG	2 cut(s)	36, 1451
BseRI	GAGGAG	3 cut(s)	1179, 1300, 1460
BseSI	GKGCMC	1 cut(s)	1037
BseXI	GCAGC	1 cut(s)	964
Bsh1236I	CGCG	1 cut(s)	206
Bsh1285I	CGRYCG	1 cut(s)	231
BshFI	GGCC	6 cut(s)	140, 360, 375, 804, 1357, 1397
BshNI	GGYRCC	1 cut(s)	1034
BsiEI	CGRYCG	1 cut(s)	231
BsiHKAI	GWGCWC	2 cut(s)	648, 711
BsiHKCI	CYCGRG	1 cut(s)	1327
BsiSI	CCGG	9 cut(s)	135, 380, 649, 949, 1174, 1250, 1394, 1424, 1498
BslFI	GGGAC	4 cut(s)	101, 481, 539, 1375
BslI	CCNNNNNNNGG	2 cut(s)	665, 1404
BsmAI	GTCTC	4 cut(s)	1004, 1072, 1405, 1464
BsmFI	GGGAC	4 cut(s)	101, 481, 539, 1375
BsnI	GGCC	6 cut(s)	140, 360, 375, 804, 1357, 1397
Bso31I	GGTCTC	2 cut(s)	1072, 1464
BsoBI	CYCGRG	1 cut(s)	1327
Bsp119I	TTCGAA	3 cut(s)	89, 450, 1152
Bsp1286I	GDGCHC	3 cut(s)	648, 711, 1037
Bsp13I	TCCGGA	1 cut(s)	1249
Bsp143I	GATC	8 cut(s)	228, 252, 479, 484, 1252, 1258, 1287, 1374
BspACI	CCGC	8 cut(s)	120, 141, 258, 348, 351, 698, 1358, 1439
BspANI	GGCC	6 cut(s)	140, 360, 375, 804, 1357, 1397
BspCNI	CTCAG	4 cut(s)	748, 912, 994, 997
BspEI	TCCGGA	1 cut(s)	1249
BspFNI	CGCG	1 cut(s)	206
BspLI	GGNNCC	8 cut(s)	57, 117, 139, 262, 680, 947, 1036, 1449
BspPI	GGATC	2 cut(s)	1260, 1282
BspQI	GCTCTTC	1 cut(s)	1277
BspT104I	TTCGAA	3 cut(s)	89, 450, 1152
BspT107I	GGYRCC	1 cut(s)	1034
BspTNI	GGTCTC	2 cut(s)	1072, 1464
BsrFI	RCCGGY	2 cut(s)	1173, 1423
BsrI	ACTGG	2 cut(s)	36, 1451
BssAI	RCCGGY	2 cut(s)	1173, 1423
BssECI	CCNNGG	9 cut(s)	51, 135, 406, 664, 782, 877, 1106, 1392, 1523
BssMI	GATC	8 cut(s)	228, 252, 479, 484, 1252, 1258, 1287, 1374
BssNAI	GTATAC	1 cut(s)	901
BssT1I	CCWWGG	5 cut(s)	406, 664, 782, 877, 1106
Bst1107I	GTATAC	1 cut(s)	901
Bst2UI	CCWGG	3 cut(s)	113, 801, 1464
Bst4CI	ACNGT	2 cut(s)	40, 506
Bst6I	CTCTTC	4 cut(s)	432, 911, 1075, 1277
BstAPI	GCANNNNNTGC	1 cut(s)	430
BstBAI	YACGTR	1 cut(s)	1180
BstBI	TTCGAA	3 cut(s)	89, 450, 1152
BstC8I	GCNNGC	3 cut(s)	8, 358, 1425
BstDEI	CTNAG	6 cut(s)	735, 846, 920, 984, 1002, 1284
BstDSI	CCRYGG	1 cut(s)	1523
BstENI	CCTNNNNNAGG	1 cut(s)	663
BstF5I	GGATG	4 cut(s)	10, 590, 793, 1003
BstFNI	CGCG	1 cut(s)	206
BstH2I	RGCGCY	1 cut(s)	313
BstHHI	GCGC	3 cut(s)	6, 208, 312
BstKTI	GATC	8 cut(s)	231, 255, 482, 487, 1255, 1261, 1290, 1377
BstMAI	GTCTC	4 cut(s)	1004, 1072, 1405, 1464
BstMBI	GATC	8 cut(s)	228, 252, 479, 484, 1252, 1258, 1287, 1374
BstMCI	CGRYCG	1 cut(s)	231
BstMWI	GCNNNNNNNGC	6 cut(s)	140, 357, 430, 980, 1205, 1414
BstNI	CCWGG	3 cut(s)	113, 801, 1464
BstNSI	RCATGY	1 cut(s)	10
BstSCI	CCNGG	7 cut(s)	111, 134, 379, 799, 1392, 1462, 1497
BstSFI	CTRYAG	1 cut(s)	475
BstSLI	GKGCMC	1 cut(s)	1037
BstUI	CGCG	1 cut(s)	206
BstV1I	GCAGC	1 cut(s)	964
BstV2I	GAAGAC	3 cut(s)	732, 1165, 1309
BstX2I	RGATCY	2 cut(s)	479, 1287
BstXI	CCANNNNNNTGG	2 cut(s)	970, 1530
BstYI	RGATCY	2 cut(s)	479, 1287
BstZ17I	GTATAC	1 cut(s)	901
BsuRI	GGCC	6 cut(s)	140, 360, 375, 804, 1357, 1397
BtgI	CCRYGG	1 cut(s)	1523
BtsCI	GGATG	4 cut(s)	10, 590, 793, 1003
BtsI	GCAGTG	1 cut(s)	558
BtsIMutI	CAGTG	1 cut(s)	558
Cac8I	GCNNGC	3 cut(s)	8, 358, 1425
CaiI	CAGNNNCTG	1 cut(s)	1199
CfoI	GCGC	3 cut(s)	6, 208, 312
Cfr10I	RCCGGY	2 cut(s)	1173, 1423
Cfr13I	GGNCC	5 cut(s)	55, 115, 138, 374, 679
CseI	GACGC	1 cut(s)	1205
CsiI	ACCWGGT	1 cut(s)	111
Csp6I	GTAC	2 cut(s)	1177, 1350
CviAII	CATG	4 cut(s)	7, 185, 1262, 1399
CviQI	GTAC	2 cut(s)	1177, 1350
DdeI	CTNAG	6 cut(s)	735, 846, 920, 984, 1002, 1284
DpnI	GATC	8 cut(s)	230, 254, 481, 486, 1254, 1260, 1289, 1376
DpnII	GATC	8 cut(s)	228, 252, 479, 484, 1252, 1258, 1287, 1374
DraIII	CACNNNGTG	1 cut(s)	830
EaeI	YGGCCR	2 cut(s)	802, 1395
Eam1104I	CTCTTC	4 cut(s)	432, 911, 1075, 1277
EarI	CTCTTC	4 cut(s)	432, 911, 1075, 1277
Eco130I	CCWWGG	5 cut(s)	406, 664, 782, 877, 1106
Eco31I	GGTCTC	2 cut(s)	1072, 1464
Eco32I	GATATC	1 cut(s)	654
Eco47I	GGWCC	3 cut(s)	55, 115, 679
Eco47III	AGCGCT	1 cut(s)	311
Eco57I	CTGAAG	4 cut(s)	4, 230, 525, 744
Eco88I	CYCGRG	1 cut(s)	1327
EcoNI	CCTNNNNNAGG	1 cut(s)	663
EcoO109I	RGGNCCY	2 cut(s)	55, 115
EcoRII	CCWGG	3 cut(s)	111, 799, 1462
EcoRV	GATATC	1 cut(s)	654
EcoT14I	CCWWGG	5 cut(s)	406, 664, 782, 877, 1106
EcoT22I	ATGCAT	1 cut(s)	12
ErhI	CCWWGG	5 cut(s)	406, 664, 782, 877, 1106
FaeI	CATG	4 cut(s)	10, 188, 1265, 1402
FaiI	YATR	9 cut(s)	8, 186, 324, 776, 901, 926, 981, 1263, 1400
FalI	AAGNNNNNCTT	2 cut(s)	501, 533
FaqI	GGGAC	4 cut(s)	101, 481, 539, 1375
FatI	CATG	4 cut(s)	6, 184, 1261, 1398
FauI	CCCGC	1 cut(s)	127
FbaI	TGATCA	2 cut(s)	484, 1374
FblI	GTMKAC	1 cut(s)	900
Fnu4HI	GCNGC	6 cut(s)	141, 259, 349, 953, 1358, 1440
FokI	GGATG	3 cut(s)	577, 800, 1010
Fsp4HI	GCNGC	6 cut(s)	141, 259, 349, 953, 1358, 1440
FspAI	RTGCGCAY	1 cut(s)	5
FspBI	CTAG	2 cut(s)	407, 827
FspI	TGCGCA	1 cut(s)	5
GlaI	GCGC	3 cut(s)	5, 207, 311
GluI	GCNGC	6 cut(s)	141, 259, 349, 953, 1358, 1440
GsuI	CTGGAG	2 cut(s)	326, 1446
HaeII	RGCGCY	1 cut(s)	313
HaeIII	GGCC	6 cut(s)	140, 360, 375, 804, 1357, 1397
HapII	CCGG	9 cut(s)	135, 380, 649, 949, 1174, 1250, 1394, 1424, 1498
HgaI	GACGC	1 cut(s)	1205
HhaI	GCGC	3 cut(s)	6, 208, 312
Hin1II	CATG	4 cut(s)	10, 188, 1265, 1402
Hin6I	GCGC	3 cut(s)	4, 206, 310
HinP1I	GCGC	3 cut(s)	4, 206, 310
HincII	GTYRAC	5 cut(s)	268, 718, 865, 1116, 1191
HindII	GTYRAC	5 cut(s)	268, 718, 865, 1116, 1191
HindIII	AAGCTT	2 cut(s)	212, 515
HinfI	GANTC	4 cut(s)	418, 578, 851, 1505
HpaI	GTTAAC	1 cut(s)	268
HpaII	CCGG	9 cut(s)	135, 380, 649, 949, 1174, 1250, 1394, 1424, 1498
HphI	GGTGA	3 cut(s)	648, 842, 1204
Hpy166II	GTNNAC	8 cut(s)	174, 202, 268, 718, 865, 901, 1116, 1191
Hpy188I	TCNGA	8 cut(s)	23, 79, 484, 544, 751, 921, 1237, 1379
Hpy188III	TCNNGA	9 cut(s)	97, 166, 232, 305, 337, 986, 1250, 1256, 1327
Hpy8I	GTNNAC	8 cut(s)	174, 202, 268, 718, 865, 901, 1116, 1191
Hpy99I	CGWCG	1 cut(s)	1493
HpyCH4III	ACNGT	2 cut(s)	40, 506
HpyCH4IV	ACGT	2 cut(s)	283, 1179
HpyCH4V	TGCA	3 cut(s)	10, 758, 812
HpyF10VI	GCNNNNNNNGC	6 cut(s)	140, 357, 430, 980, 1205, 1414
HpyF3I	CTNAG	6 cut(s)	735, 846, 920, 984, 1002, 1284
HpySE526I	ACGT	2 cut(s)	283, 1179
Hsp92II	CATG	4 cut(s)	10, 188, 1265, 1402
HspAI	GCGC	3 cut(s)	4, 206, 310
Kpn2I	TCCGGA	1 cut(s)	1249
KroI	GCCGGC	1 cut(s)	1423
KroNI	GCCGGC	1 cut(s)	1425
Ksp22I	TGATCA	2 cut(s)	484, 1374
KspAI	GTTAAC	1 cut(s)	268
Kzo9I	GATC	8 cut(s)	228, 252, 479, 484, 1252, 1258, 1287, 1374
LguI	GCTCTTC	1 cut(s)	1277
LmnI	GCTCC	5 cut(s)	266, 307, 1252, 1447, 1525
Lsp1109I	GCAGC	1 cut(s)	964
LweI	GCATC	4 cut(s)	19, 470, 599, 988
MabI	ACCWGGT	1 cut(s)	111
MaeI	CTAG	2 cut(s)	407, 827
MaeII	ACGT	2 cut(s)	283, 1179
MaeIII	GTNAC	3 cut(s)	34, 279, 1180
MalI	GATC	8 cut(s)	230, 254, 481, 486, 1254, 1260, 1289, 1376
MboI	GATC	8 cut(s)	228, 252, 479, 484, 1252, 1258, 1287, 1374
MflI	RGATCY	2 cut(s)	479, 1287
MhlI	GDGCHC	3 cut(s)	648, 711, 1037
MlsI	TGGCCA	1 cut(s)	804
MluCI	AATT	5 cut(s)	534, 686, 743, 858, 1059
MluNI	TGGCCA	1 cut(s)	804
MlyI	GAGTC	1 cut(s)	1499
Mox20I	TGGCCA	1 cut(s)	804
Mph1103I	ATGCAT	1 cut(s)	12
MroI	TCCGGA	1 cut(s)	1249
MroNI	GCCGGC	1 cut(s)	1423
MroXI	GAANNNNTTC	1 cut(s)	446
MscI	TGGCCA	1 cut(s)	804
MseI	TTAA	4 cut(s)	153, 267, 297, 941
MslI	CAYNNNNRTG	2 cut(s)	1044, 1528
Msp20I	TGGCCA	1 cut(s)	804
MspA1I	CMGCKG	4 cut(s)	122, 258, 348, 1360
MspI	CCGG	9 cut(s)	135, 380, 649, 949, 1174, 1250, 1394, 1424, 1498
MspR9I	CCNGG	7 cut(s)	113, 136, 381, 801, 1394, 1464, 1499
MvaI	CCWGG	3 cut(s)	113, 801, 1464
MvnI	CGCG	1 cut(s)	206
MwoI	GCNNNNNNNGC	6 cut(s)	140, 357, 430, 980, 1205, 1414
NaeI	GCCGGC	1 cut(s)	1425
NciI	CCSGG	4 cut(s)	136, 381, 1394, 1499
NdeII	GATC	8 cut(s)	228, 252, 479, 484, 1252, 1258, 1287, 1374
NgoMIV	GCCGGC	1 cut(s)	1423
NlaIII	CATG	4 cut(s)	10, 188, 1265, 1402
NlaIV	GGNNCC	8 cut(s)	57, 117, 139, 262, 680, 947, 1036, 1449
NmeAIII	GCCGAG	1 cut(s)	76
NmuCI	GTSAC	2 cut(s)	34, 1180
NsbI	TGCGCA	1 cut(s)	5
NsiI	ATGCAT	1 cut(s)	12
NspI	RCATGY	1 cut(s)	10
NspV	TTCGAA	3 cut(s)	89, 450, 1152
PaeI	GCATGC	1 cut(s)	10
PaeR7I	CTCGAG	1 cut(s)	1327
PciSI	GCTCTTC	1 cut(s)	1277
PcsI	WCGNNNNNNNCGW	2 cut(s)	1488, 1531
PdiI	GCCGGC	1 cut(s)	1425
PdmI	GAANNNNTTC	1 cut(s)	446
PfeI	GAWTC	3 cut(s)	418, 578, 851
PflFI	GACNNNGTC	2 cut(s)	1186, 1478
PflMI	CCANNNNNTGG	1 cut(s)	1404
PfoI	TCCNGGA	2 cut(s)	1462, 1497
PkrI	GCNGC	6 cut(s)	142, 260, 350, 954, 1359, 1441
Ple19I	CGATCG	1 cut(s)	231
PleI	GAGTC	1 cut(s)	1499
PpsI	GAGTC	1 cut(s)	1499
Ppu21I	YACGTR	1 cut(s)	1180
PpuMI	RGGWCCY	2 cut(s)	55, 115
Psp5II	RGGWCCY	2 cut(s)	55, 115
Psp6I	CCWGG	3 cut(s)	111, 799, 1462
PspGI	CCWGG	3 cut(s)	111, 799, 1462
PspN4I	GGNNCC	8 cut(s)	57, 117, 139, 262, 680, 947, 1036, 1449
PspPI	GGNCC	5 cut(s)	55, 115, 138, 374, 679
PspPPI	RGGWCCY	2 cut(s)	55, 115
PstNI	CAGNNNCTG	1 cut(s)	1199
PsuI	RGATCY	2 cut(s)	479, 1287
PsyI	GACNNNGTC	2 cut(s)	1186, 1478
PvuI	CGATCG	1 cut(s)	231
RsaI	GTAC	2 cut(s)	1178, 1351
RsaNI	GTAC	2 cut(s)	1177, 1350
RseI	CAYNNNNRTG	2 cut(s)	1044, 1528
SapI	GCTCTTC	1 cut(s)	1277
SaqAI	TTAA	4 cut(s)	153, 267, 297, 941
SatI	GCNGC	6 cut(s)	141, 259, 349, 953, 1358, 1440
Sau3AI	GATC	8 cut(s)	228, 252, 479, 484, 1252, 1258, 1287, 1374
Sau96I	GGNCC	5 cut(s)	55, 115, 138, 374, 679
SchI	GAGTC	1 cut(s)	1499
ScrFI	CCNGG	7 cut(s)	113, 136, 381, 801, 1394, 1464, 1499
SduI	GDGCHC	3 cut(s)	648, 711, 1037
SexAI	ACCWGGT	1 cut(s)	111
SfaNI	GCATC	4 cut(s)	19, 470, 599, 988
SfcI	CTRYAG	1 cut(s)	475
Sfr274I	CTCGAG	1 cut(s)	1327
SfuI	TTCGAA	3 cut(s)	89, 450, 1152
SinI	GGWCC	3 cut(s)	55, 115, 679
SlaI	CTCGAG	1 cut(s)	1327
SmiMI	CAYNNNNRTG	2 cut(s)	1044, 1528
SmlI	CTYRAG	3 cut(s)	215, 494, 1327
SmoI	CTYRAG	3 cut(s)	215, 494, 1327
SphI	GCATGC	1 cut(s)	10
Sse9I	AATT	5 cut(s)	534, 686, 743, 858, 1059
SsiI	CCGC	8 cut(s)	120, 141, 258, 348, 351, 698, 1358, 1439
SspMI	CTAG	2 cut(s)	407, 827
StyD4I	CCNGG	7 cut(s)	111, 134, 379, 799, 1392, 1462, 1497
StyI	CCWWGG	5 cut(s)	406, 664, 782, 877, 1106
TaaI	ACNGT	2 cut(s)	40, 506
TaiI	ACGT	2 cut(s)	286, 1182
TaqII	GACCGA	1 cut(s)	1446
TasI	AATT	5 cut(s)	534, 686, 743, 858, 1059
TatI	WGTACW	1 cut(s)	1349
TauI	GCSGC	5 cut(s)	143, 261, 351, 1360, 1442
TfiI	GAWTC	3 cut(s)	418, 578, 851
Tru1I	TTAA	4 cut(s)	153, 267, 297, 941
Tru9I	TTAA	4 cut(s)	153, 267, 297, 941
TscAI	CASTG	1 cut(s)	558
TseFI	GTSAC	2 cut(s)	34, 1180
TseI	GCWGC	1 cut(s)	952
Tsp45I	GTSAC	2 cut(s)	34, 1180
TspDTI	ATGAA	2 cut(s)	804, 981
TspGWI	ACGGA	4 cut(s)	253, 318, 671, 1303
TspRI	CASTG	1 cut(s)	558
Tth111I	GACNNNGTC	2 cut(s)	1186, 1478
Van91I	CCANNNNNTGG	1 cut(s)	1404
VpaK11BI	GGWCC	3 cut(s)	55, 115, 679
XagI	CCTNNNNNAGG	1 cut(s)	663
XapI	RAATTY	2 cut(s)	686, 743
XceI	RCATGY	1 cut(s)	10
XhoI	CTCGAG	1 cut(s)	1327
XmaJI	CCTAGG	1 cut(s)	406
XmiI	GTMKAC	1 cut(s)	900
XmnI	GAANNNNTTC	1 cut(s)	446
XspI	CTAG	2 cut(s)	407, 827
Zsp2I	ATGCAT	1 cut(s)	12

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.