Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb4

Orthogroup ID

OG0001310

Physical Location & Seq

Genomic Coordinates Reverse (-)

25361464 .. 25365682

Gene Structure 4219 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_4g22610.t2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2310 bp

ATGTCGTTTGTACCGTACGGTAAAGATCCTCAATCCTCAAACGACGACGTTTGTGGGTTTAACACCCTCTTTGAAACCCTACAACACAAGTCATTCTCGCTATCCTCCACTCTTCGCATGCGCATCCTCAATTTCCTAACCTCATCGATTCCACTTGGCCACGCTCTCTTCACTCGCCTCACTCCTTCCTCGCCGTCCCTCTCTCTCCTCCGCCGCTTCACATCAACCATGGCCGCCGAGGATAATCTCCGCCAAGCCCTCTCCGCTAAGCTCTCGGAGGTCGAGAGCCAGGGCAACCAGGTCCGCGCTCTCAAGCAATCCGGCGCCGCCAAGCCCGAGCTCGACGCCGCCATTGAGGCCTTGAACGCGCTCAAGCTCGAGAAGGCGACGATCGAGAAGGACCTCCAGGCAACCATCAGCGGCGGCGACGGCGGTGGCTCCTTGAACAAGGAGGCGTTACGTCAGGCTGTGGTGAACACTCTGGAGCGCCGTTTGTTTTATATTCCGTCTTTTAAGATCTACGGCGGCGTTGCGGGTCTGTATGACTACGGTCCTCCTGGCTGCGCCGTCAAGTCCAATGTCCTAGGGTTTTGGCGTCAGCATTTTGTACTTGAAGAGAACATGCTGGAAGTTGACTGCCCGTGTGTCACACCTGAGGTCGTGTTGAAAGCATCTGGTCACGTAGACAAATTCACCGATCTTATGGTCAAGGATGAGGAATCTGGGACTTGCTACAGAGCTGATCACCTTCTCAAGGATTACTGTAAAGATAAGCTTGAAAAGGACCTCAGAATTACCTCAGAGATGGCAATGGAGTTGAAGGAAGTACTTTCAAAATTAGATGTCCTCTCTGCTGAAGAGCTGGGTCAATGTATTAAGAAATATGGTATTACAGCCCCTGACACAAAGAATCCTCTCTCGGATCCTTATCCGTTCAACCTGATGTTTCAAACATCAATTGGTCCTTCTGGTGTGAGCACTGGGTATATGCGTCCGGAAACTGCTCAAGGGATTTTTGTGAATTTCAGGGACTTGTACTATTACAATGGGAACAAGCTCCCTTTTGCTGCAGCCCAAATTGGGCAGGCTTTCAGAAATGAGATATCACCTCGCCAAGGTCTTTTGAGAGTCCGTGAGTTTACTCTGGCAGAGATTGAGCACTTCGTTGACCCCGAAGACAAGTCTCACCCAAAATTCTCTGATGTTGCACATTTGGAGTTTCTGATGTTCCCAAGGGACGAACAGAAGCCTGGCCAGTCTGCAAGGGTAATATCCCTACGTGAAGCCGTTTCTTCTAAGGATTCAAAAGTTGTCGACAACGAAACCCTTGGCTACTTTATTGGGAGAGTATACCTCTTCCTCACTAGTCTGGGTATTGACAAGAACCGGTTAAGGTTCCGGCAGCACCTGGCAAATGAAATGGCTCATTATGCCCAGGACTGTTGGGATGCTGAGATTGAGACGTCATACGGCTGGATTGAGTGCGTTGGCATTGCAGATAGATCTGCATACGACTTGAAGGCTCATTCGGAGAAAAGTAGAGTTGATCTTGAGGCACAGGAAAAGTATTCTGAACCAAGAGAAGTTGAGAAATTGGTTATTTCTCCTGTGAAGAAAGCGATCGGTCTTGCTTTCAAGGGGGACCAAAAGAAAGTACTTGAAGCTTTGGAGGCCATGAAAGAAGAAGAAGCTTTGAAAATGAAAACAGATTTAGCATCAAAAGGGGAGGTGGAGTTTTATGTATGCACTCTGGGGAAAACCGTTACTGTTAATTCAAGTATGGTAACAATCTCAAAAGAGAAAAAGAAAGAACACCAGAGAGTTTTCACGCCCTCGGTAATTGAACCATCTTTTGGTATTGGTCGGATAATCTACTGCCTCTATGAGCACTCATACTACATGAGGCCAAGTAAAGATGGGAATGAACAGTTTAACGTGTTCCGGTTCCCCCCTCTTGTGGCACCCATCAAGTGTACAGTTTTCCCGTTGGTTCAGAAGCAAGAGTACGAGGAAGTTTCGAAAGTCATTTCAAAGTCATTGACCGCATCTGGGATATCACATAAAATTGATATTACAGGTACCTCCATTGGGAAGCGATACGCCCGAACTGATGAACTTGGTGTACCATTTGCTATTACCGTTGATTCCACTTCTTCCGTAACAATCCGCGAAAGAGATAGCAAGGACCAAATCCGGGTTGATGTCAGTGAAGCAGCATCTGTTGTCAAGGATATAGCCGAGGGGGTGAGGACATGGGCAGATGTGTGGTCGACTTTCCCACACCATTCTTCTGGTTCAGCAGACGAGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000959 GO:0003674 GO:0003824 GO:0004812 GO:0004820 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005768 GO:0005794 GO:0005802 GO:0005829 GO:0006082 GO:0006139 GO:0006399 GO:0006412 GO:0006418 GO:0006426 GO:0006518 GO:0006520 GO:0006725 GO:0006753 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009117 GO:0009165 GO:0009987 GO:0010035 GO:0010038 GO:0010467 GO:0012505 GO:0015959 GO:0015960 GO:0015965 GO:0015966 GO:0016070 GO:0016874 GO:0016875 GO:0018130 GO:0019438 GO:0019538 GO:0019637 GO:0019752 GO:0031410 GO:0031982 GO:0031984 GO:0032543 GO:0034641 GO:0034645 GO:0034654 GO:0034660 GO:0042221 GO:0043038 GO:0043039 GO:0043043 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0043603 GO:0043604 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044281 GO:0044422 GO:0044424 GO:0044431 GO:0044444 GO:0044446 GO:0044464 GO:0046483 GO:0046686 GO:0046983 GO:0050896 GO:0055086 GO:0070127 GO:0070150 GO:0071704 GO:0090304 GO:0090407 GO:0097708 GO:0098791 GO:0140053 GO:0140098 GO:0140101 GO:1901293 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00970 map00970

Pfam Domains

Protein Families

HGTP_anticodon WHEP-TRS tRNA-synt_2b

Protein Analysis

770

Amino Acids

85.94

Weight (kDa)

6.0

Isoelectric Point (pI)

39.28

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
WHEP-TRS	PF00458	53 - 96	3.8e-09	WHEP-TRS domain
tRNA-synt_2b	PF00587	290 - 371	1.3e-09	tRNA synthetase class II core domain (G, H, P, S and T)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001310)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G29880
fragaria_vesca	FvH4_4g22441 FvH4_4g22450 FvH4_4g22450 FvH4_4g22610 FvH4_4g22610
malus_domestica	MD13G1131000.v1.1 MD13G1145800.v1.1 MD16G1141200.v1.1
prunus_persica	Prupe.1G214600_v2.0.a1
pyrus_communis	pycom13g11430 pycom13g12530 pycom16g11160 pycom16g11170
rosa_chinensis	RchiOBHm_Chr1g0361881 RchiOBHm_Chr4g0428711 RchiOBHm_Chr4g0428851
rosa_laevigata	RLG00000007120 RLG00000007133 RLG00000027689 RLG00000027690 RLG00000027694
rosa_multiflora	Rmu_co8208336.1_g000001 Rmu_co8210234.1_g000001 Rmu_sc0003316.1_g000006 Rmu_sc0008612.1_g000003 Rmu_sc0018216.1_g000001 Rmu_ssc0000124.1_g000013
rosa_roxburghii	Rroxscaffold_4G00294630 Rroxscaffold_5G00370530
rosa_rugosa	Rorug01G0292100 Rorug04G0227400 Rorug04G0227500 Rorug04G0229700
rosa_samantha	Rh1AG302800 Rh1BG265900 Rh1BG266000 Rh1CG284000 Rh1DG295900 Rh1DG296000 Rh4AG284700 Rh4AG284900 Rh4AG286400 Rh4BG290700 Rh4BG290900 Rh4BG292200 Rh4CG308200 Rh4DG288200 Rh4DG289400
rosa_wichuraiana	Rw0G020620 Rw1G026830 Rw4G024720 Rw4G024830 Rw7G040280

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	1466
Acc16I	TGCGCA	1 cut(s)	122
Acc65I	GGTACC	1 cut(s)	2078
AccB1I	GGYRCC	3 cut(s)	323, 1960, 2078
AccB7I	CCANNNNNTGG	1 cut(s)	1853
AccI	GTMKAC	4 cut(s)	684, 1314, 1350, 2270
AccII	CGCG	3 cut(s)	306, 368, 2169
AccIII	TCCGGA	1 cut(s)	994
AclWI	GGATC	3 cut(s)	20, 917, 930
AcoI	YGGCCR	3 cut(s)	157, 231, 1252
AcsI	RAATTY	3 cut(s)	689, 1021, 1193
AcuI	CTGAAG	1 cut(s)	876
AcyI	GRCGYC	4 cut(s)	324, 345, 595, 1463
AfiI	CCNNNNNNNGG	8 cut(s)	754, 1080, 1115, 1853, 1957, 2049, 2088, 2194
AflIII	ACRYGT	1 cut(s)	1935
AgeI	ACCGGT	1 cut(s)	1386
AhlI	ACTAGT	1 cut(s)	1364
AjnI	CCWGG	7 cut(s)	288, 297, 405, 556, 1249, 1407, 1434
AjuI	GAANNNNNNNTTGG	2 cut(s)	1836, 1868
AluBI	AGCT	9 cut(s)	271, 340, 376, 740, 775, 862, 1057, 1664, 1691
AluI	AGCT	9 cut(s)	271, 340, 376, 740, 775, 862, 1057, 1664, 1691
Alw21I	GWGCWC	4 cut(s)	342, 980, 1161, 1890
Alw26I	GTCTC	2 cut(s)	1188, 1454
AlwI	GGATC	3 cut(s)	20, 917, 930
AlwNI	CAGNNNCTG	3 cut(s)	899, 1408, 2219
Ama87I	CYCGRG	2 cut(s)	335, 377
Aor13HI	TCCGGA	1 cut(s)	994
AoxI	GGCC	6 cut(s)	157, 231, 357, 1252, 1671, 1904
ApeKI	GCWGC	5 cut(s)	561, 1067, 1070, 1402, 2213
ApoI	RAATTY	3 cut(s)	689, 1021, 1193
AsiGI	ACCGGT	1 cut(s)	1386
Asp718I	GGTACC	1 cut(s)	2078
AspA2I	CCTAGG	1 cut(s)	583
AspLEI	GCGC	6 cut(s)	123, 308, 326, 370, 489, 566
AspS9I	GGNCC	7 cut(s)	301, 400, 551, 784, 962, 1642, 2185
AsuC2I	CCSGG	1 cut(s)	2195
AsuHPI	GGTGA	6 cut(s)	484, 685, 737, 1098, 1178, 2257
AsuII	TTCGAA	1 cut(s)	2018
AvaI	CYCGRG	2 cut(s)	335, 377
AvaII	GGWCC	7 cut(s)	301, 400, 551, 784, 962, 1642, 2185
AvrII	CCTAGG	1 cut(s)	583
AxyI	CCTNAGG	1 cut(s)	654
BalI	TGGCCA	2 cut(s)	159, 1254
BamHI	GGATCC	1 cut(s)	922
BanI	GGYRCC	3 cut(s)	323, 1960, 2078
BanII	GRGCYC	1 cut(s)	342
BarI	GAAGNNNNNNTAC	2 cut(s)	1988, 2020
BbsI	GAAGAC	1 cut(s)	1182
Bbv12I	GWGCWC	4 cut(s)	342, 980, 1161, 1890
BbvI	GCAGC	5 cut(s)	548, 1054, 1082, 1414, 2225
BccI	CCATC	5 cut(s)	422, 799, 1855, 1910, 1973
BceAI	ACGGC	7 cut(s)	178, 445, 474, 538, 551, 1271, 1486
BciT130I	CCWGG	7 cut(s)	290, 299, 407, 558, 1251, 1409, 1436
BclI	TGATCA	1 cut(s)	742
BcnI	CCSGG	1 cut(s)	2195
BcoDI	GTCTC	2 cut(s)	1188, 1454
BcuI	ACTAGT	1 cut(s)	1364
BfaI	CTAG	2 cut(s)	584, 1365
BfmI	CTRYAG	2 cut(s)	733, 1068
BfoI	RGCGCY	2 cut(s)	327, 490
BglI	GCCNNNNNGGC	1 cut(s)	356
BglII	AGATCT	2 cut(s)	516, 1502
BlnI	CCTAGG	1 cut(s)	583
BlpI	GCTNAGC	1 cut(s)	267
BmcAI	AGTACT	2 cut(s)	828, 1656
Bme1390I	CCNGG	8 cut(s)	290, 299, 407, 558, 1251, 1409, 1436, 2195
Bme18I	GGWCC	7 cut(s)	301, 400, 551, 784, 962, 1642, 2185
BmeT110I	CYCGRG	2 cut(s)	335, 377
BmgT120I	GGNCC	7 cut(s)	301, 400, 551, 784, 962, 1642, 2185
BmiI	GGNNCC	8 cut(s)	325, 439, 924, 1397, 1643, 1946, 1962, 2080
BmrFI	CCNGG	8 cut(s)	290, 299, 407, 558, 1251, 1409, 1436, 2195
BmrI	ACTGGG	1 cut(s)	990
BmsI	GCATC	6 cut(s)	132, 680, 1438, 1724, 2054, 2225
BmuI	ACTGGG	1 cut(s)	990
BoxI	GACNNNNGTC	1 cut(s)	549
BpiI	GAAGAC	1 cut(s)	1182
BplI	GAGNNNNNCTC	2 cut(s)	1338, 1370
BpmI	CTGGAG	2 cut(s)	389, 503
Bpu1102I	GCTNAGC	1 cut(s)	267
Bpu14I	TTCGAA	1 cut(s)	2018
BpuEI	CTTGAG	5 cut(s)	296, 356, 737, 990, 1571
BpuMI	CCSGG	1 cut(s)	2195
Bsa29I	ATCGAT	1 cut(s)	146
BsaAI	YACGTR	2 cut(s)	682, 1280
BsaBI	GATNNNNATC	1 cut(s)	927
BsaHI	GRCGYC	4 cut(s)	324, 345, 595, 1463
BsaWI	WCCGGW	3 cut(s)	994, 1386, 1941
BsaXI	ACNNNNNCTCC	2 cut(s)	1718, 1748
Bsc4I	CCNNNNNNNGG	8 cut(s)	754, 1080, 1115, 1853, 1957, 2049, 2088, 2194
Bse118I	RCCGGY	1 cut(s)	1386
Bse1I	ACTGG	2 cut(s)	985, 1255
Bse21I	CCTNAGG	1 cut(s)	654
Bse3DI	GCAATG	2 cut(s)	816, 1491
Bse8I	GATNNNNATC	1 cut(s)	927
BseAI	TCCGGA	1 cut(s)	994
BseBI	CCWGG	7 cut(s)	290, 299, 407, 558, 1251, 1409, 1436
BseCI	ATCGAT	1 cut(s)	146
BseGI	GGATG	3 cut(s)	123, 718, 1453
BseJI	GATNNNNATC	1 cut(s)	927
BseLI	CCNNNNNNNGG	8 cut(s)	754, 1080, 1115, 1853, 1957, 2049, 2088, 2194
BseMI	GCAATG	2 cut(s)	816, 1491
BseMII	CTCAG	4 cut(s)	645, 802, 813, 1443
BseNI	ACTGG	2 cut(s)	985, 1255
BseRI	GAGGAG	1 cut(s)	197
BseXI	GCAGC	5 cut(s)	548, 1054, 1082, 1414, 2225
BseYI	CCCAGC	1 cut(s)	862
Bsh1236I	CGCG	3 cut(s)	306, 368, 2169
Bsh1285I	CGRYCG	2 cut(s)	393, 1623
BshFI	GGCC	6 cut(s)	159, 233, 359, 1254, 1673, 1906
BshNI	GGYRCC	3 cut(s)	323, 1960, 2078
BshTI	ACCGGT	1 cut(s)	1386
BshVI	ATCGAT	1 cut(s)	146
BsiEI	CGRYCG	2 cut(s)	393, 1623
BsiHKAI	GWGCWC	4 cut(s)	342, 980, 1161, 1890
BsiHKCI	CYCGRG	2 cut(s)	335, 377
BsiSI	CCGG	6 cut(s)	321, 995, 1387, 1399, 1942, 2194
BsiWI	CGTACG	1 cut(s)	15
BslFI	GGGAC	5 cut(s)	181, 739, 1043, 1250, 1655
BslI	CCNNNNNNNGG	8 cut(s)	754, 1080, 1115, 1853, 1957, 2049, 2088, 2194
BsmAI	GTCTC	2 cut(s)	1188, 1454
BsmBI	CGTCTC	1 cut(s)	1454
BsmFI	GGGAC	5 cut(s)	181, 739, 1043, 1250, 1655
BsnI	GGCC	6 cut(s)	159, 233, 359, 1254, 1673, 1906
BsoBI	CYCGRG	2 cut(s)	335, 377
Bsp119I	TTCGAA	1 cut(s)	2018
Bsp1286I	GDGCHC	4 cut(s)	342, 980, 1161, 1890
Bsp13I	TCCGGA	1 cut(s)	994
Bsp1407I	TGTACA	1 cut(s)	1973
Bsp143I	GATC	9 cut(s)	25, 390, 516, 697, 742, 922, 1502, 1546, 1620
Bsp1720I	GCTNAGC	1 cut(s)	267
Bsp19I	CCATGG	1 cut(s)	228
BspANI	GGCC	6 cut(s)	159, 233, 359, 1254, 1673, 1906
BspCNI	CTCAG	4 cut(s)	646, 801, 812, 1444
BspDI	ATCGAT	1 cut(s)	146
BspEI	TCCGGA	1 cut(s)	994
BspFNI	CGCG	3 cut(s)	306, 368, 2169
BspLI	GGNNCC	8 cut(s)	325, 439, 924, 1397, 1643, 1946, 1962, 2080
BspMAI	CTGCAG	1 cut(s)	1072
BspPI	GGATC	3 cut(s)	20, 917, 930
BspQI	GCTCTTC	1 cut(s)	852
BspT104I	TTCGAA	1 cut(s)	2018
BspT107I	GGYRCC	3 cut(s)	323, 1960, 2078
BsrDI	GCAATG	2 cut(s)	816, 1491
BsrFI	RCCGGY	1 cut(s)	1386
BsrGI	TGTACA	1 cut(s)	1973
BsrI	ACTGG	2 cut(s)	985, 1255
BssAI	RCCGGY	1 cut(s)	1386
BssMI	GATC	9 cut(s)	25, 390, 516, 697, 742, 922, 1502, 1546, 1620
BssNAI	GTATAC	1 cut(s)	1351
BssNI	GRCGYC	4 cut(s)	324, 345, 595, 1463
BssT1I	CCWWGG	5 cut(s)	228, 583, 1114, 1232, 1327
Bst1107I	GTATAC	1 cut(s)	1351
Bst2UI	CCWGG	7 cut(s)	290, 299, 407, 558, 1251, 1409, 1436
Bst6I	CTCTTC	5 cut(s)	117, 173, 609, 852, 1361
BstACI	GRCGYC	4 cut(s)	324, 345, 595, 1463
BstAUI	TGTACA	1 cut(s)	1973
BstBAI	YACGTR	2 cut(s)	682, 1280
BstBI	TTCGAA	1 cut(s)	2018
BstC8I	GCNNGC	2 cut(s)	119, 1086
BstDEI	CTNAG	6 cut(s)	267, 654, 788, 799, 1296, 1452
BstDSI	CCRYGG	1 cut(s)	228
BstENI	CCTNNNNNAGG	2 cut(s)	752, 1113
BstF5I	GGATG	3 cut(s)	123, 718, 1453
BstFNI	CGCG	3 cut(s)	306, 368, 2169
BstH2I	RGCGCY	2 cut(s)	327, 490
BstHHI	GCGC	6 cut(s)	123, 308, 326, 370, 489, 566
BstKTI	GATC	9 cut(s)	28, 393, 519, 700, 745, 925, 1505, 1549, 1623
BstMAI	GTCTC	2 cut(s)	1188, 1454
BstMBI	GATC	9 cut(s)	25, 390, 516, 697, 742, 922, 1502, 1546, 1620
BstMCI	CGRYCG	2 cut(s)	393, 1623
BstMWI	GCNNNNNNNGC	6 cut(s)	263, 356, 365, 429, 1430, 1670
BstNI	CCWGG	7 cut(s)	290, 299, 407, 558, 1251, 1409, 1436
BstNSI	RCATGY	2 cut(s)	121, 625
BstPAI	GACNNNNGTC	1 cut(s)	549
BstSCI	CCNGG	8 cut(s)	288, 297, 405, 556, 1249, 1407, 1434, 2193
BstSFI	CTRYAG	2 cut(s)	733, 1068
BstUI	CGCG	3 cut(s)	306, 368, 2169
BstV1I	GCAGC	5 cut(s)	548, 1054, 1082, 1414, 2225
BstV2I	GAAGAC	1 cut(s)	1182
BstX2I	RGATCY	4 cut(s)	25, 516, 922, 1502
BstXI	CCANNNNNNTGG	1 cut(s)	2291
BstYI	RGATCY	4 cut(s)	25, 516, 922, 1502
BstZ17I	GTATAC	1 cut(s)	1351
Bsu15I	ATCGAT	1 cut(s)	146
Bsu36I	CCTNAGG	1 cut(s)	654
BsuRI	GGCC	6 cut(s)	159, 233, 359, 1254, 1673, 1906
BsuTUI	ATCGAT	1 cut(s)	146
BtgI	CCRYGG	1 cut(s)	228
BtsCI	GGATG	3 cut(s)	123, 718, 1453
BtsIMutI	CAGTG	2 cut(s)	978, 2212
Cac8I	GCNNGC	2 cut(s)	119, 1086
CaiI	CAGNNNCTG	3 cut(s)	899, 1408, 2219
CfoI	GCGC	6 cut(s)	123, 308, 326, 370, 489, 566
Cfr10I	RCCGGY	1 cut(s)	1386
Cfr13I	GGNCC	7 cut(s)	301, 400, 551, 784, 962, 1642, 2185
ClaI	ATCGAT	1 cut(s)	146
CseI	GACGC	3 cut(s)	353, 584, 980
CsiI	ACCWGGT	1 cut(s)	297
CspAI	ACCGGT	1 cut(s)	1386
CviAII	CATG	6 cut(s)	118, 229, 622, 1675, 1900, 2253
DdeI	CTNAG	6 cut(s)	267, 654, 788, 799, 1296, 1452
DinI	GGCGCC	1 cut(s)	325
DpnI	GATC	9 cut(s)	27, 392, 518, 699, 744, 924, 1504, 1548, 1622
DpnII	GATC	9 cut(s)	25, 390, 516, 697, 742, 922, 1502, 1546, 1620
EaeI	YGGCCR	3 cut(s)	157, 231, 1252
Eam1104I	CTCTTC	5 cut(s)	117, 173, 609, 852, 1361
EarI	CTCTTC	5 cut(s)	117, 173, 609, 852, 1361
EciI	GGCGGA	2 cut(s)	200, 239
Ecl136II	GAGCTC	1 cut(s)	340
Eco130I	CCWWGG	5 cut(s)	228, 583, 1114, 1232, 1327
Eco147I	AGGCCT	1 cut(s)	359
Eco24I	GRGCYC	1 cut(s)	342
Eco32I	GATATC	2 cut(s)	1104, 2055
Eco47I	GGWCC	7 cut(s)	301, 400, 551, 784, 962, 1642, 2185
Eco53kI	GAGCTC	1 cut(s)	340
Eco57I	CTGAAG	1 cut(s)	876
Eco81I	CCTNAGG	1 cut(s)	654
Eco88I	CYCGRG	2 cut(s)	335, 377
EcoICRI	GAGCTC	1 cut(s)	340
EcoNI	CCTNNNNNAGG	2 cut(s)	752, 1113
EcoO109I	RGGNCCY	2 cut(s)	400, 784
EcoRII	CCWGG	7 cut(s)	288, 297, 405, 556, 1249, 1407, 1434
EcoRV	GATATC	2 cut(s)	1104, 2055
EcoT14I	CCWWGG	5 cut(s)	228, 583, 1114, 1232, 1327
EcoT38I	GRGCYC	1 cut(s)	342
EgeI	GGCGCC	1 cut(s)	325
EheI	GGCGCC	1 cut(s)	325
ErhI	CCWWGG	5 cut(s)	228, 583, 1114, 1232, 1327
Esp3I	CGTCTC	1 cut(s)	1454
FaeI	CATG	6 cut(s)	121, 232, 625, 1678, 1903, 2256
FalI	AAGNNNNNCTT	2 cut(s)	759, 791
FaqI	GGGAC	5 cut(s)	181, 739, 1043, 1250, 1655
FatI	CATG	6 cut(s)	117, 228, 621, 1674, 1899, 2252
FauI	CCCGC	1 cut(s)	526
FbaI	TGATCA	1 cut(s)	742
FblI	GTMKAC	4 cut(s)	684, 1314, 1350, 2270
FokI	GGATG	3 cut(s)	110, 725, 1460
FriOI	GRGCYC	1 cut(s)	342
FspAI	RTGCGCAY	1 cut(s)	122
FspBI	CTAG	2 cut(s)	584, 1365
FspI	TGCGCA	1 cut(s)	122
GlaI	GCGC	6 cut(s)	122, 307, 325, 369, 488, 565
GsaI	CCCAGC	1 cut(s)	866
GsuI	CTGGAG	2 cut(s)	389, 503
HaeII	RGCGCY	2 cut(s)	327, 490
HaeIII	GGCC	6 cut(s)	159, 233, 359, 1254, 1673, 1906
HapII	CCGG	6 cut(s)	321, 995, 1387, 1399, 1942, 2194
HgaI	GACGC	3 cut(s)	353, 584, 980
HhaI	GCGC	6 cut(s)	123, 308, 326, 370, 489, 566
Hin1I	GRCGYC	4 cut(s)	324, 345, 595, 1463
Hin1II	CATG	6 cut(s)	121, 232, 625, 1678, 1903, 2256
Hin6I	GCGC	6 cut(s)	121, 306, 324, 368, 487, 564
HinP1I	GCGC	6 cut(s)	121, 306, 324, 368, 487, 564
HincII	GTYRAC	4 cut(s)	634, 1168, 1315, 2271
HindII	GTYRAC	4 cut(s)	634, 1168, 1315, 2271
HindIII	AAGCTT	3 cut(s)	773, 1662, 1689
HinfI	GANTC	6 cut(s)	148, 719, 910, 1128, 1301, 2144
HpaII	CCGG	6 cut(s)	321, 995, 1387, 1399, 1942, 2194
HphI	GGTGA	6 cut(s)	484, 685, 737, 1098, 1178, 2257
Hpy188III	TCNNGA	6 cut(s)	283, 379, 394, 482, 995, 1550
Hpy99I	CGWCG	5 cut(s)	47, 50, 347, 391, 431
HpyAV	CCTTC	7 cut(s)	195, 376, 391, 758, 814, 975, 1513
HpyCH4IV	ACGT	6 cut(s)	48, 460, 681, 1279, 1463, 1935
HpyCH4V	TGCA	6 cut(s)	1070, 1208, 1262, 1496, 1508, 1746
HpyF10VI	GCNNNNNNNGC	6 cut(s)	263, 356, 365, 429, 1430, 1670
HpyF3I	CTNAG	6 cut(s)	267, 654, 788, 799, 1296, 1452
HpySE526I	ACGT	6 cut(s)	48, 460, 681, 1279, 1463, 1935
Hsp92I	GRCGYC	4 cut(s)	324, 345, 595, 1463
Hsp92II	CATG	6 cut(s)	121, 232, 625, 1678, 1903, 2256
HspAI	GCGC	6 cut(s)	121, 306, 324, 368, 487, 564
KasI	GGCGCC	1 cut(s)	323
Kpn2I	TCCGGA	1 cut(s)	994
KpnI	GGTACC	1 cut(s)	2082
Ksp22I	TGATCA	1 cut(s)	742
Kzo9I	GATC	9 cut(s)	25, 390, 516, 697, 742, 922, 1502, 1546, 1620
LguI	GCTCTTC	1 cut(s)	852
LmnI	GCTCC	3 cut(s)	443, 484, 1062
Lsp1109I	GCAGC	5 cut(s)	548, 1054, 1082, 1414, 2225
LweI	GCATC	6 cut(s)	132, 680, 1438, 1724, 2054, 2225
MabI	ACCWGGT	1 cut(s)	297
MaeI	CTAG	2 cut(s)	584, 1365
MaeII	ACGT	6 cut(s)	48, 460, 681, 1279, 1463, 1935
MaeIII	GTNAC	6 cut(s)	456, 646, 677, 1762, 1783, 2158
MalI	GATC	9 cut(s)	27, 392, 518, 699, 744, 924, 1504, 1548, 1622
MboI	GATC	9 cut(s)	25, 390, 516, 697, 742, 922, 1502, 1546, 1620
MfeI	CAATTG	1 cut(s)	957
MflI	RGATCY	4 cut(s)	25, 516, 922, 1502
MhlI	GDGCHC	4 cut(s)	342, 980, 1161, 1890
MlsI	TGGCCA	2 cut(s)	159, 1254
MluNI	TGGCCA	2 cut(s)	159, 1254
Mly113I	GGCGCC	1 cut(s)	324
MlyI	GAGTC	1 cut(s)	1137
MmeI	TCCRAC	1 cut(s)	1844
Mox20I	TGGCCA	2 cut(s)	159, 1254
MroI	TCCGGA	1 cut(s)	994
MscI	TGGCCA	2 cut(s)	159, 1254
MseI	TTAA	6 cut(s)	60, 513, 876, 1391, 1770, 1932
Msp20I	TGGCCA	2 cut(s)	159, 1254
MspA1I	CMGCKG	1 cut(s)	420
MspI	CCGG	6 cut(s)	321, 995, 1387, 1399, 1942, 2194
MspR9I	CCNGG	8 cut(s)	290, 299, 407, 558, 1251, 1409, 1436, 2195
MunI	CAATTG	1 cut(s)	957
MvaI	CCWGG	7 cut(s)	290, 299, 407, 558, 1251, 1409, 1436
MvnI	CGCG	3 cut(s)	306, 368, 2169
MwoI	GCNNNNNNNGC	6 cut(s)	263, 356, 365, 429, 1430, 1670
NarI	GGCGCC	1 cut(s)	324
NciI	CCSGG	1 cut(s)	2195
NcoI	CCATGG	1 cut(s)	228
NdeII	GATC	9 cut(s)	25, 390, 516, 697, 742, 922, 1502, 1546, 1620
NlaIII	CATG	6 cut(s)	121, 232, 625, 1678, 1903, 2256
NlaIV	GGNNCC	8 cut(s)	325, 439, 924, 1397, 1643, 1946, 1962, 2080
NmeAIII	GCCGAG	2 cut(s)	262, 2263
NmuCI	GTSAC	2 cut(s)	646, 677
NsbI	TGCGCA	1 cut(s)	122
NspI	RCATGY	2 cut(s)	121, 625
NspV	TTCGAA	1 cut(s)	2018
PaeI	GCATGC	1 cut(s)	121
PaeR7I	CTCGAG	1 cut(s)	377
PceI	AGGCCT	1 cut(s)	359
PciSI	GCTCTTC	1 cut(s)	852
PcsI	WCGNNNNNNNCGW	2 cut(s)	11, 1170
PfeI	GAWTC	5 cut(s)	148, 719, 910, 1301, 2144
Pfl23II	CGTACG	1 cut(s)	15
PflMI	CCANNNNNTGG	1 cut(s)	1853
PinAI	ACCGGT	1 cut(s)	1386
Ple19I	CGATCG	2 cut(s)	393, 1623
PleI	GAGTC	1 cut(s)	1136
PluTI	GGCGCC	1 cut(s)	327
PpsI	GAGTC	1 cut(s)	1136
Ppu21I	YACGTR	2 cut(s)	682, 1280
PpuMI	RGGWCCY	2 cut(s)	400, 784
PshAI	GACNNNNGTC	1 cut(s)	549
Psp124BI	GAGCTC	1 cut(s)	342
Psp5II	RGGWCCY	2 cut(s)	400, 784
Psp6I	CCWGG	7 cut(s)	288, 297, 405, 556, 1249, 1407, 1434
PspFI	CCCAGC	1 cut(s)	862
PspGI	CCWGG	7 cut(s)	288, 297, 405, 556, 1249, 1407, 1434
PspLI	CGTACG	1 cut(s)	15
PspN4I	GGNNCC	8 cut(s)	325, 439, 924, 1397, 1643, 1946, 1962, 2080
PspPI	GGNCC	7 cut(s)	301, 400, 551, 784, 962, 1642, 2185
PspPPI	RGGWCCY	2 cut(s)	400, 784
PsrI	GAACNNNNNNTAC	2 cut(s)	2106, 2138
PstI	CTGCAG	1 cut(s)	1072
PstNI	CAGNNNCTG	3 cut(s)	899, 1408, 2219
PsuI	RGATCY	4 cut(s)	25, 516, 922, 1502
PvuI	CGATCG	2 cut(s)	393, 1623
SacI	GAGCTC	1 cut(s)	342
SalI	GTCGAC	2 cut(s)	1313, 2269
SapI	GCTCTTC	1 cut(s)	852
SaqAI	TTAA	6 cut(s)	60, 513, 876, 1391, 1770, 1932
Sau3AI	GATC	9 cut(s)	25, 390, 516, 697, 742, 922, 1502, 1546, 1620
Sau96I	GGNCC	7 cut(s)	301, 400, 551, 784, 962, 1642, 2185
ScaI	AGTACT	2 cut(s)	828, 1656
SchI	GAGTC	1 cut(s)	1137
ScrFI	CCNGG	8 cut(s)	290, 299, 407, 558, 1251, 1409, 1436, 2195
SduI	GDGCHC	4 cut(s)	342, 980, 1161, 1890
SexAI	ACCWGGT	1 cut(s)	297
SfaNI	GCATC	6 cut(s)	132, 680, 1438, 1724, 2054, 2225
SfcI	CTRYAG	2 cut(s)	733, 1068
SfoI	GGCGCC	1 cut(s)	325
Sfr274I	CTCGAG	1 cut(s)	377
SfuI	TTCGAA	1 cut(s)	2018
SinI	GGWCC	7 cut(s)	301, 400, 551, 784, 962, 1642, 2185
SlaI	CTCGAG	1 cut(s)	377
SmlI	CTYRAG	6 cut(s)	311, 371, 377, 752, 1005, 1550
SmoI	CTYRAG	6 cut(s)	311, 371, 377, 752, 1005, 1550
SpeI	ACTAGT	1 cut(s)	1364
SphI	GCATGC	1 cut(s)	121
SseBI	AGGCCT	1 cut(s)	359
SspDI	GGCGCC	1 cut(s)	323
SspMI	CTAG	2 cut(s)	584, 1365
SstI	GAGCTC	1 cut(s)	342
StuI	AGGCCT	1 cut(s)	359
StyD4I	CCNGG	8 cut(s)	288, 297, 405, 556, 1249, 1407, 1434, 2193
StyI	CCWWGG	5 cut(s)	228, 583, 1114, 1232, 1327
TaiI	ACGT	6 cut(s)	51, 463, 684, 1282, 1466, 1938
TaqI	TCGA	8 cut(s)	146, 282, 342, 378, 393, 1314, 2018, 2270
TaqII	GACCGA	1 cut(s)	1613
TatI	WGTACW	5 cut(s)	607, 826, 1035, 1654, 1973
TauI	GCSGC	7 cut(s)	216, 236, 329, 350, 423, 426, 528
TfiI	GAWTC	5 cut(s)	148, 719, 910, 1301, 2144
Tru1I	TTAA	6 cut(s)	60, 513, 876, 1391, 1770, 1932
Tru9I	TTAA	6 cut(s)	60, 513, 876, 1391, 1770, 1932
TscAI	CASTG	2 cut(s)	985, 2212
TseFI	GTSAC	2 cut(s)	646, 677
TseI	GCWGC	5 cut(s)	561, 1067, 1070, 1402, 2213
Tsp45I	GTSAC	2 cut(s)	646, 677
TspDTI	ATGAA	5 cut(s)	1431, 1691, 1715, 1938, 2127
TspGWI	ACGGA	4 cut(s)	495, 921, 1121, 2146
TspRI	CASTG	2 cut(s)	985, 2212
Van91I	CCANNNNNTGG	1 cut(s)	1853
VpaK11BI	GGWCC	7 cut(s)	301, 400, 551, 784, 962, 1642, 2185
XagI	CCTNNNNNAGG	2 cut(s)	752, 1113
XapI	RAATTY	3 cut(s)	689, 1021, 1193
XceI	RCATGY	2 cut(s)	121, 625
XhoI	CTCGAG	1 cut(s)	377
XmaJI	CCTAGG	1 cut(s)	583
XmiI	GTMKAC	4 cut(s)	684, 1314, 1350, 2270
XspI	CTAG	2 cut(s)	584, 1365
ZraI	GACGTC	1 cut(s)	1464
ZrmI	AGTACT	2 cut(s)	828, 1656

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.