Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr1

Orthogroup ID

OG0001310

Physical Location & Seq

Genomic Coordinates Reverse (-)

54049081 .. 54050972

Gene Structure 1892 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw1G026830.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1863 bp

ATGAGAAATAATAATACAGAAAGCTCCCGCAGTGCTCTGGCCAACACTCTTGAACGGCGCTTCTTTTACATCCCTTCTTTCAAGATCTACGGCGCCGTTGCTGGCCTCTACGACTATGGCTCGCCCGGCTGCAAACTCAAGAAGAATGTCCTTTCGCTTTGGCATCAGCACTTTGTTCATGAAGAGAACATGTGGGAGATTGACTGCCCTTGTCTCACGCCAGAAGCTGTCTTGAAGGCATCTGGCCATGTAGATAAGTTCACTGATCTCATGGTTAAGGATGAGAAGAAAGGGACTTGCTACCGGGCTGATCACTTGCTCAAGGATTTCTGCAATAACAAGCTTGAAGATCAGGACCGTCGCATTAGTCCAGAGATGGCAATGGAGCTGAAACAAGTGCTTTCTAAATTGGATGGTCTATCAGCTGAAGAGCTGGGTGCATGCATTAAGAAATATGGGATTAGAGCCCCCGAAACAGATAATTATCTCTCAGATCCTTATCCTTTCAACTTGATGTTTCAAACATCAATTGGTCCGTCCGGTTCGAGCACTGGTTTCTTTCGCCCAGAAACTGCACAAGGCATATTTGTGAATTTTATGGACATTTACTATGACAATGGGTGCAAGCTGCCCTTTGCCGTTGCTCAAGTTGGCCAGGCTTTTCGAAACGAGATATCTCCTCGCCAAGGCCTGTTGAGACACTTTGTTGATCCTGAAGACAAATCTCACGTCAAATTCTCCACCGTCGACAAGTTGCAACTTCCTATGTTCCCAAGGGATGAACAAAAGCCCGGCCAATCTGCAAGATTAATCTCTCTGGGGGAAGCAGTACATTCTAAGATTGTGGAGAATGAAACTCTTGGCTACTTCATTGGGAGAGTATATCTCTTCCTCACTCGTCTGGGTATAGACAAGAACCGTGTAAGGTTCAGGCAACACCTTGCTAAAGAGATGGCTCACTATGCTGCTGACTGCTGGGATGCTGAGATTGAGACTTCCTATGGCTGGATTGAGTGCGTCGGTATTGCAGATAGATCTGCATATGACTTGAAAGCTCATTCGGGGAAAAGTCGTCTTGAGGCACATGAACAACTTTCAGAACCAAGAGAAGTGGAGAAATTGGTTATATCTCCGGTAAAGAGAGAGATTGGCCCTGCTTTCGAGAAGAAGCAAAAGAATGTGCTTGAAGCTTTGGAGGCTATGGATGAAGAAGAAATTTCAAAAATGAAGGCCGAGTTAGACTCCAAGGGGGAGGTGGACTTCTTTGTCTGCACTCTTGGGGAACATGTATCTATTAAGAGCAGTATGGTGACAATTTCAAAGGTTAAAACAAGAGAACATCAAAGAAAATTCACACCCTCAGTAATCGAGCCTTCGTTTGGTATTGGGAGGATTATATATTGTCTCTTTGAGCATTCCTTCTACACCAGACCAGATAAAACAGGGGATGAACAATTGAATGTGTTTCGCTTTAACCCACTTGTGGCGCCTTTTAAGTGCACAGTTTTCCCTCTGATTCGGAACCAACGGTTTGAGGATGTTGCCAAGGACATTTCCAAGTCATTGACTGCTGCTGGCATATCGCATAAAATAGATACTACAGGTACCTCGATTGGGAAACGTTATGCACGTACTGATGAGCTCGGTGTACCCTTTGCAATCACGGTTGATTCTACATCCTCGGTCACAATTCGAGAAAGAGACAGCAAAGATCAAATCCGTGTTAGTGTGAAGAAGGCAGTATCTGTTGTGAAGGAGCTCAGTGAGGGGTTGAGGACTTGGGAAGATTTGTGGTGGTCACCTAGTCAACGGTGGAAGAGATTCTGGCGTTCCTGCTTTAGATTTATATTGTCTAGAAACTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000959 GO:0003674 GO:0003824 GO:0004812 GO:0004820 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005768 GO:0005794 GO:0005802 GO:0005829 GO:0006082 GO:0006139 GO:0006399 GO:0006412 GO:0006418 GO:0006426 GO:0006518 GO:0006520 GO:0006725 GO:0006753 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009117 GO:0009165 GO:0009987 GO:0010035 GO:0010038 GO:0010467 GO:0012505 GO:0015959 GO:0015960 GO:0015965 GO:0015966 GO:0016070 GO:0016874 GO:0016875 GO:0018130 GO:0019438 GO:0019538 GO:0019637 GO:0019752 GO:0031410 GO:0031982 GO:0031984 GO:0032543 GO:0034641 GO:0034645 GO:0034654 GO:0034660 GO:0042221 GO:0043038 GO:0043039 GO:0043043 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0043603 GO:0043604 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044281 GO:0044422 GO:0044424 GO:0044431 GO:0044444 GO:0044446 GO:0044464 GO:0046483 GO:0046686 GO:0046983 GO:0050896 GO:0055086 GO:0070127 GO:0070150 GO:0071704 GO:0090304 GO:0090407 GO:0097708 GO:0098791 GO:0140053 GO:0140098 GO:0140101 GO:1901293 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00970 map00970

Pfam Domains

Protein Families

HGTP_anticodon WHEP-TRS tRNA-synt_2b

Protein Analysis

620

Amino Acids

70.87

Weight (kDa)

8.25

Isoelectric Point (pI)

42.73

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
HGTP_anticodon	PF03129	499 - 587	1.3e-19	Anticodon binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0001310)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G29880
fragaria_vesca	FvH4_4g22441 FvH4_4g22450 FvH4_4g22450 FvH4_4g22610 FvH4_4g22610
malus_domestica	MD13G1131000.v1.1 MD13G1145800.v1.1 MD16G1141200.v1.1
prunus_persica	Prupe.1G214600_v2.0.a1
pyrus_communis	pycom13g11430 pycom13g12530 pycom16g11160 pycom16g11170
rosa_chinensis	RchiOBHm_Chr1g0361881 RchiOBHm_Chr4g0428711 RchiOBHm_Chr4g0428851
rosa_laevigata	RLG00000007120 RLG00000007133 RLG00000027689 RLG00000027690 RLG00000027694
rosa_multiflora	Rmu_co8208336.1_g000001 Rmu_co8210234.1_g000001 Rmu_sc0003316.1_g000006 Rmu_sc0008612.1_g000003 Rmu_sc0018216.1_g000001 Rmu_ssc0000124.1_g000013
rosa_roxburghii	Rroxscaffold_4G00294630 Rroxscaffold_5G00370530
rosa_rugosa	Rorug01G0292100 Rorug04G0227400 Rorug04G0227500 Rorug04G0229700
rosa_samantha	Rh1AG302800 Rh1BG265900 Rh1BG266000 Rh1CG284000 Rh1DG295900 Rh1DG296000 Rh4AG284700 Rh4AG284900 Rh4AG286400 Rh4BG290700 Rh4BG290900 Rh4BG292200 Rh4CG308200 Rh4DG288200 Rh4DG289400
rosa_wichuraiana	Rw0G020620 Rw1G026830 Rw4G024720 Rw4G024830 Rw7G040280

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1265
Acc65I	GGTACC	1 cut(s)	1604
AccB1I	GGYRCC	3 cut(s)	92, 1486, 1604
AccI	GTMKAC	1 cut(s)	747
AciI	CCGC	1 cut(s)	28
AclI	AACGTT	1 cut(s)	1621
AclWI	GGATC	2 cut(s)	488, 704
AcoI	YGGCCR	4 cut(s)	39, 244, 652, 793
AcsI	RAATTY	4 cut(s)	592, 734, 1215, 1349
AcuI	CTGAAG	2 cut(s)	447, 735
AcyI	GRCGYC	2 cut(s)	93, 1487
AfaI	GTAC	4 cut(s)	831, 1606, 1633, 1650
AfiI	CCNNNNNNNGG	5 cut(s)	686, 1005, 1379, 1483, 1614
AflIII	ACRYGT	2 cut(s)	189, 1285
AjiI	CACGTC	1 cut(s)	730
AjnI	CCWGG	1 cut(s)	654
Alw21I	GWGCWC	5 cut(s)	37, 551, 1502, 1644, 1761
Alw26I	GTCTC	5 cut(s)	218, 691, 986, 1409, 1695
Alw44I	GTGCAC	1 cut(s)	1498
AlwI	GGATC	2 cut(s)	488, 704
AlwNI	CAGNNNCTG	3 cut(s)	227, 572, 1745
AoxI	GGCC	8 cut(s)	39, 103, 244, 652, 688, 793, 1150, 1230
ApaLI	GTGCAC	1 cut(s)	1498
ApeKI	GCWGC	4 cut(s)	129, 628, 965, 1571
ApoI	RAATTY	4 cut(s)	592, 734, 1215, 1349
ArsI	GACNNNNNNTTYG	2 cut(s)	714, 746
AseI	ATTAAT	1 cut(s)	809
Asp700I	GAANNNNTTC	1 cut(s)	1820
Asp718I	GGTACC	1 cut(s)	1604
AspLEI	GCGC	3 cut(s)	60, 95, 1489
AspS9I	GGNCC	3 cut(s)	355, 533, 1151
AsuC2I	CCSGG	3 cut(s)	126, 305, 792
AsuHPI	GGTGA	2 cut(s)	1321, 1791
AsuII	TTCGAA	1 cut(s)	664
AvaII	GGWCC	2 cut(s)	355, 533
BaeGI	GKGCMC	1 cut(s)	1502
BalI	TGGCCA	3 cut(s)	41, 246, 654
BanI	GGYRCC	3 cut(s)	92, 1486, 1604
BanII	GRGCYC	3 cut(s)	469, 1644, 1761
BbsI	GAAGAC	1 cut(s)	723
Bbv12I	GWGCWC	5 cut(s)	37, 551, 1502, 1644, 1761
BbvI	GCAGC	4 cut(s)	116, 615, 952, 1558
BccI	CCATC	3 cut(s)	370, 407, 946
BceAI	ACGGC	4 cut(s)	71, 80, 106, 623
BciT130I	CCWGG	1 cut(s)	656
BclI	TGATCA	1 cut(s)	310
BcnI	CCSGG	3 cut(s)	126, 305, 792
BcoDI	GTCTC	5 cut(s)	218, 691, 986, 1409, 1695
BfaI	CTAG	2 cut(s)	1803, 1854
BfmI	CTRYAG	1 cut(s)	1599
BfoI	RGCGCY	3 cut(s)	61, 96, 1490
BglII	AGATCT	2 cut(s)	84, 1034
BisI	GCNGC	4 cut(s)	130, 629, 966, 1572
BlsI	GCNGC	4 cut(s)	131, 630, 967, 1573
Bme1390I	CCNGG	4 cut(s)	126, 305, 656, 792
Bme18I	GGWCC	2 cut(s)	355, 533
BmgBI	CACGTC	1 cut(s)	730
BmgT120I	GGNCC	3 cut(s)	355, 533, 1151
BmiI	GGNNCC	4 cut(s)	94, 1488, 1523, 1606
BmrFI	CCNGG	4 cut(s)	126, 305, 656, 792
BmsI	GCATC	3 cut(s)	172, 248, 970
BpiI	GAAGAC	1 cut(s)	723
BplI	GAGNNNNNCTC	4 cut(s)	870, 902, 1226, 1258
Bpu14I	TTCGAA	1 cut(s)	664
BpuEI	CTTGAG	4 cut(s)	122, 305, 630, 1097
BpuMI	CCSGG	3 cut(s)	126, 305, 792
BsaAI	YACGTR	1 cut(s)	1631
BsaBI	GATNNNNATC	2 cut(s)	483, 498
BsaHI	GRCGYC	2 cut(s)	93, 1487
BsaJI	CCNNGG	5 cut(s)	685, 773, 1245, 1545, 1680
BsaWI	WCCGGW	2 cut(s)	539, 1132
Bsc4I	CCNNNNNNNGG	5 cut(s)	686, 1005, 1379, 1483, 1614
Bse1I	ACTGG	1 cut(s)	556
Bse3DI	GCAATG	1 cut(s)	387
Bse8I	GATNNNNATC	2 cut(s)	483, 498
BseBI	CCWGG	1 cut(s)	656
BseDI	CCNNGG	5 cut(s)	685, 773, 1245, 1545, 1680
BseGI	GGATG	9 cut(s)	69, 286, 418, 784, 985, 1210, 1453, 1543, 1676
BseJI	GATNNNNATC	2 cut(s)	483, 498
BseLI	CCNNNNNNNGG	5 cut(s)	686, 1005, 1379, 1483, 1614
BseMI	GCAATG	1 cut(s)	387
BseMII	CTCAG	4 cut(s)	504, 975, 1374, 1774
BseNI	ACTGG	1 cut(s)	556
BseRI	GAGGAG	1 cut(s)	669
BseSI	GKGCMC	1 cut(s)	1502
BseXI	GCAGC	4 cut(s)	116, 615, 952, 1558
BseYI	CCCAGC	2 cut(s)	433, 975
BsgI	GTGCAG	2 cut(s)	558, 1255
BshFI	GGCC	8 cut(s)	41, 105, 246, 654, 690, 795, 1152, 1232
BshNI	GGYRCC	3 cut(s)	92, 1486, 1604
BsiHKAI	GWGCWC	5 cut(s)	37, 551, 1502, 1644, 1761
BsiSI	CCGG	5 cut(s)	126, 304, 540, 792, 1133
BslFI	GGGAC	1 cut(s)	307
BslI	CCNNNNNNNGG	5 cut(s)	686, 1005, 1379, 1483, 1614
BsmAI	GTCTC	5 cut(s)	218, 691, 986, 1409, 1695
BsmFI	GGGAC	1 cut(s)	307
BsmI	GAATGC	1 cut(s)	1414
BsnI	GGCC	8 cut(s)	41, 105, 246, 654, 690, 795, 1152, 1232
Bsp119I	TTCGAA	1 cut(s)	664
Bsp1286I	GDGCHC	6 cut(s)	37, 469, 551, 1502, 1644, 1761
Bsp143I	GATC	8 cut(s)	84, 265, 310, 349, 493, 709, 1034, 1711
BspACI	CCGC	1 cut(s)	28
BspANI	GGCC	8 cut(s)	41, 105, 246, 654, 690, 795, 1152, 1232
BspCNI	CTCAG	4 cut(s)	503, 976, 1373, 1773
BspHI	TCATGA	1 cut(s)	178
BspLI	GGNNCC	4 cut(s)	94, 1488, 1523, 1606
BspPI	GGATC	2 cut(s)	488, 704
BspQI	GCTCTTC	1 cut(s)	423
BspT104I	TTCGAA	1 cut(s)	664
BspT107I	GGYRCC	3 cut(s)	92, 1486, 1604
BsrDI	GCAATG	1 cut(s)	387
BsrI	ACTGG	1 cut(s)	556
BssECI	CCNNGG	5 cut(s)	685, 773, 1245, 1545, 1680
BssMI	GATC	8 cut(s)	84, 265, 310, 349, 493, 709, 1034, 1711
BssNI	GRCGYC	2 cut(s)	93, 1487
BssT1I	CCWWGG	4 cut(s)	685, 773, 1245, 1545
Bst2UI	CCWGG	1 cut(s)	656
Bst4CI	ACNGT	7 cut(s)	359, 745, 920, 1504, 1530, 1666, 1812
Bst6I	CTCTTC	4 cut(s)	177, 423, 893, 1811
BstACI	GRCGYC	2 cut(s)	93, 1487
BstBAI	YACGTR	1 cut(s)	1631
BstBI	TTCGAA	1 cut(s)	664
BstC8I	GCNNGC	5 cut(s)	103, 122, 442, 626, 1576
BstDEI	CTNAG	5 cut(s)	490, 837, 984, 1360, 1760
BstEII	GGTNACC	1 cut(s)	1797
BstENI	CCTNNNNNAGG	1 cut(s)	684
BstF5I	GGATG	9 cut(s)	69, 286, 418, 784, 985, 1210, 1453, 1543, 1676
BstH2I	RGCGCY	3 cut(s)	61, 96, 1490
BstHHI	GCGC	3 cut(s)	60, 95, 1489
BstKTI	GATC	8 cut(s)	87, 268, 313, 352, 496, 712, 1037, 1714
BstMAI	GTCTC	5 cut(s)	218, 691, 986, 1409, 1695
BstMBI	GATC	8 cut(s)	84, 265, 310, 349, 493, 709, 1034, 1711
BstMWI	GCNNNNNNNGC	3 cut(s)	126, 962, 1196
BstNI	CCWGG	1 cut(s)	656
BstNSI	RCATGY	3 cut(s)	193, 444, 1289
BstPI	GGTNACC	1 cut(s)	1797
BstSCI	CCNGG	4 cut(s)	124, 303, 654, 790
BstSFI	CTRYAG	1 cut(s)	1599
BstSLI	GKGCMC	1 cut(s)	1502
BstV1I	GCAGC	4 cut(s)	116, 615, 952, 1558
BstV2I	GAAGAC	1 cut(s)	723
BstX2I	RGATCY	3 cut(s)	84, 493, 1034
BstYI	RGATCY	3 cut(s)	84, 493, 1034
BsuRI	GGCC	8 cut(s)	41, 105, 246, 654, 690, 795, 1152, 1232
BtrI	CACGTC	1 cut(s)	730
BtsCI	GGATG	9 cut(s)	69, 286, 418, 784, 985, 1210, 1453, 1543, 1676
BtsI	GCAGTG	1 cut(s)	37
BtsIMutI	CAGTG	4 cut(s)	37, 261, 549, 1768
Cac8I	GCNNGC	5 cut(s)	103, 122, 442, 626, 1576
CaiI	CAGNNNCTG	3 cut(s)	227, 572, 1745
CciI	TCATGA	1 cut(s)	178
CfoI	GCGC	3 cut(s)	60, 95, 1489
Cfr13I	GGNCC	3 cut(s)	355, 533, 1151
CseI	GACGC	1 cut(s)	1006
Csp6I	GTAC	4 cut(s)	830, 1605, 1632, 1649
CspCI	CAANNNNNGTGG	2 cut(s)	1092, 1127
CviAII	CATG	7 cut(s)	179, 190, 248, 271, 441, 1085, 1286
CviQI	GTAC	4 cut(s)	830, 1605, 1632, 1649
DdeI	CTNAG	5 cut(s)	490, 837, 984, 1360, 1760
DinI	GGCGCC	2 cut(s)	94, 1488
DpnI	GATC	8 cut(s)	86, 267, 312, 351, 495, 711, 1036, 1713
DpnII	GATC	8 cut(s)	84, 265, 310, 349, 493, 709, 1034, 1711
DrdI	GACNNNNNNGTC	1 cut(s)	1265
DseDI	GACNNNNNNGTC	1 cut(s)	1265
EaeI	YGGCCR	4 cut(s)	39, 244, 652, 793
Eam1104I	CTCTTC	4 cut(s)	177, 423, 893, 1811
EarI	CTCTTC	4 cut(s)	177, 423, 893, 1811
Ecl136II	GAGCTC	2 cut(s)	1642, 1759
Eco130I	CCWWGG	4 cut(s)	685, 773, 1245, 1545
Eco147I	AGGCCT	1 cut(s)	690
Eco24I	GRGCYC	3 cut(s)	469, 1644, 1761
Eco32I	GATATC	1 cut(s)	675
Eco47I	GGWCC	2 cut(s)	355, 533
Eco53kI	GAGCTC	2 cut(s)	1642, 1759
Eco57I	CTGAAG	2 cut(s)	447, 735
Eco91I	GGTNACC	1 cut(s)	1797
EcoICRI	GAGCTC	2 cut(s)	1642, 1759
EcoNI	CCTNNNNNAGG	1 cut(s)	684
EcoO65I	GGTNACC	1 cut(s)	1797
EcoRII	CCWGG	1 cut(s)	654
EcoRV	GATATC	1 cut(s)	675
EcoT14I	CCWWGG	4 cut(s)	685, 773, 1245, 1545
EcoT22I	ATGCAT	1 cut(s)	446
EcoT38I	GRGCYC	3 cut(s)	469, 1644, 1761
EgeI	GGCGCC	2 cut(s)	94, 1488
EheI	GGCGCC	2 cut(s)	94, 1488
ErhI	CCWWGG	4 cut(s)	685, 773, 1245, 1545
FaeI	CATG	7 cut(s)	182, 193, 251, 274, 444, 1088, 1289
FalI	AAGNNNNNCTT	2 cut(s)	617, 649
FaqI	GGGAC	1 cut(s)	307
FatI	CATG	7 cut(s)	178, 189, 247, 270, 440, 1084, 1285
FauI	CCCGC	1 cut(s)	35
FauNDI	CATATG	1 cut(s)	1042
FbaI	TGATCA	1 cut(s)	310
FblI	GTMKAC	1 cut(s)	747
Fnu4HI	GCNGC	4 cut(s)	130, 629, 966, 1572
FokI	GGATG	9 cut(s)	56, 293, 425, 791, 992, 1217, 1460, 1550, 1663
FriOI	GRGCYC	3 cut(s)	469, 1644, 1761
Fsp4HI	GCNGC	4 cut(s)	130, 629, 966, 1572
FspBI	CTAG	2 cut(s)	1803, 1854
GlaI	GCGC	3 cut(s)	59, 94, 1488
GluI	GCNGC	4 cut(s)	130, 629, 966, 1572
GsaI	CCCAGC	2 cut(s)	437, 979
HaeII	RGCGCY	3 cut(s)	61, 96, 1490
HaeIII	GGCC	8 cut(s)	41, 105, 246, 654, 690, 795, 1152, 1232
HapII	CCGG	5 cut(s)	126, 304, 540, 792, 1133
HgaI	GACGC	1 cut(s)	1006
HhaI	GCGC	3 cut(s)	60, 95, 1489
Hin1I	GRCGYC	2 cut(s)	93, 1487
Hin1II	CATG	7 cut(s)	182, 193, 251, 274, 444, 1088, 1289
Hin6I	GCGC	3 cut(s)	58, 93, 1487
HinP1I	GCGC	3 cut(s)	58, 93, 1487
HincII	GTYRAC	2 cut(s)	748, 1808
HindII	GTYRAC	2 cut(s)	748, 1808
HindIII	AAGCTT	2 cut(s)	341, 1188
HinfI	GANTC	4 cut(s)	1241, 1516, 1670, 1821
HpaII	CCGG	5 cut(s)	126, 304, 540, 792, 1133
HphI	GGTGA	2 cut(s)	1321, 1791
Hpy166II	GTNNAC	6 cut(s)	261, 748, 1258, 1500, 1649, 1808
Hpy188I	TCNGA	4 cut(s)	493, 1099, 1515, 1521
Hpy8I	GTNNAC	6 cut(s)	261, 748, 1258, 1500, 1649, 1808
Hpy99I	CGWCG	3 cut(s)	363, 749, 1022
HpyAV	CCTTC	7 cut(s)	84, 229, 1222, 1383, 1429, 1729, 1747
HpyCH4III	ACNGT	7 cut(s)	359, 745, 920, 1504, 1530, 1666, 1812
HpyCH4IV	ACGT	3 cut(s)	729, 1621, 1630
HpyF10VI	GCNNNNNNNGC	3 cut(s)	126, 962, 1196
HpyF3I	CTNAG	5 cut(s)	490, 837, 984, 1360, 1760
HpySE526I	ACGT	3 cut(s)	729, 1621, 1630
Hsp92I	GRCGYC	2 cut(s)	93, 1487
Hsp92II	CATG	7 cut(s)	182, 193, 251, 274, 444, 1088, 1289
HspAI	GCGC	3 cut(s)	58, 93, 1487
KasI	GGCGCC	2 cut(s)	92, 1486
KpnI	GGTACC	1 cut(s)	1608
Ksp22I	TGATCA	1 cut(s)	310
Kzo9I	GATC	8 cut(s)	84, 265, 310, 349, 493, 709, 1034, 1711
LguI	GCTCTTC	1 cut(s)	423
LmnI	GCTCC	3 cut(s)	29, 385, 1756
Lsp1109I	GCAGC	4 cut(s)	116, 615, 952, 1558
LweI	GCATC	3 cut(s)	172, 248, 970
MaeI	CTAG	2 cut(s)	1803, 1854
MaeII	ACGT	3 cut(s)	729, 1621, 1630
MaeIII	GTNAC	3 cut(s)	1309, 1684, 1797
MalI	GATC	8 cut(s)	86, 267, 312, 351, 495, 711, 1036, 1713
MboI	GATC	8 cut(s)	84, 265, 310, 349, 493, 709, 1034, 1711
MfeI	CAATTG	2 cut(s)	528, 1454
MflI	RGATCY	3 cut(s)	84, 493, 1034
MhlI	GDGCHC	6 cut(s)	37, 469, 551, 1502, 1644, 1761
MlsI	TGGCCA	3 cut(s)	41, 246, 654
MluNI	TGGCCA	3 cut(s)	41, 246, 654
Mly113I	GGCGCC	2 cut(s)	93, 1487
MlyI	GAGTC	1 cut(s)	1235
Mox20I	TGGCCA	3 cut(s)	41, 246, 654
Mph1103I	ATGCAT	1 cut(s)	446
MroXI	GAANNNNTTC	1 cut(s)	1820
MscI	TGGCCA	3 cut(s)	41, 246, 654
MseI	TTAA	7 cut(s)	276, 447, 809, 1296, 1326, 1473, 1494
MslI	CAYNNNNRTG	1 cut(s)	587
Msp20I	TGGCCA	3 cut(s)	41, 246, 654
MspA1I	CMGCKG	1 cut(s)	425
MspI	CCGG	5 cut(s)	126, 304, 540, 792, 1133
MspR9I	CCNGG	4 cut(s)	126, 305, 656, 792
MunI	CAATTG	2 cut(s)	528, 1454
Mva1269I	GAATGC	1 cut(s)	1414
MvaI	CCWGG	1 cut(s)	656
MwoI	GCNNNNNNNGC	3 cut(s)	126, 962, 1196
NarI	GGCGCC	2 cut(s)	93, 1487
NciI	CCSGG	3 cut(s)	126, 305, 792
NdeI	CATATG	1 cut(s)	1042
NdeII	GATC	8 cut(s)	84, 265, 310, 349, 493, 709, 1034, 1711
NlaIII	CATG	7 cut(s)	182, 193, 251, 274, 444, 1088, 1289
NlaIV	GGNNCC	4 cut(s)	94, 1488, 1523, 1606
NmeAIII	GCCGAG	1 cut(s)	1258
NmuCI	GTSAC	3 cut(s)	1309, 1684, 1797
NsiI	ATGCAT	1 cut(s)	446
NspI	RCATGY	3 cut(s)	193, 444, 1289
NspV	TTCGAA	1 cut(s)	664
PaeI	GCATGC	1 cut(s)	444
PagI	TCATGA	1 cut(s)	178
PceI	AGGCCT	1 cut(s)	690
PciI	ACATGT	2 cut(s)	189, 1285
PciSI	GCTCTTC	1 cut(s)	423
PcsI	WCGNNNNNNNCGW	1 cut(s)	1627
PctI	GAATGC	1 cut(s)	1414
PdmI	GAANNNNTTC	1 cut(s)	1820
PfeI	GAWTC	3 cut(s)	1516, 1670, 1821
PkrI	GCNGC	4 cut(s)	131, 630, 967, 1573
PleI	GAGTC	1 cut(s)	1235
PluTI	GGCGCC	2 cut(s)	96, 1490
PpsI	GAGTC	1 cut(s)	1235
Ppu21I	YACGTR	1 cut(s)	1631
PscI	ACATGT	2 cut(s)	189, 1285
PshBI	ATTAAT	1 cut(s)	809
Psp124BI	GAGCTC	2 cut(s)	1644, 1761
Psp1406I	AACGTT	1 cut(s)	1621
Psp6I	CCWGG	1 cut(s)	654
PspEI	GGTNACC	1 cut(s)	1797
PspFI	CCCAGC	2 cut(s)	433, 975
PspGI	CCWGG	1 cut(s)	654
PspN4I	GGNNCC	4 cut(s)	94, 1488, 1523, 1606
PspPI	GGNCC	3 cut(s)	355, 533, 1151
PstNI	CAGNNNCTG	3 cut(s)	227, 572, 1745
PsuI	RGATCY	3 cut(s)	84, 493, 1034
PvuII	CAGCTG	1 cut(s)	425
RsaI	GTAC	4 cut(s)	831, 1606, 1633, 1650
RsaNI	GTAC	4 cut(s)	830, 1605, 1632, 1649
RseI	CAYNNNNRTG	1 cut(s)	587
SacI	GAGCTC	2 cut(s)	1644, 1761
SalI	GTCGAC	1 cut(s)	746
SapI	GCTCTTC	1 cut(s)	423
SaqAI	TTAA	7 cut(s)	276, 447, 809, 1296, 1326, 1473, 1494
SatI	GCNGC	4 cut(s)	130, 629, 966, 1572
Sau3AI	GATC	8 cut(s)	84, 265, 310, 349, 493, 709, 1034, 1711
Sau96I	GGNCC	3 cut(s)	355, 533, 1151
SchI	GAGTC	1 cut(s)	1235
ScrFI	CCNGG	4 cut(s)	126, 305, 656, 792
SduI	GDGCHC	6 cut(s)	37, 469, 551, 1502, 1644, 1761
SfaNI	GCATC	3 cut(s)	172, 248, 970
SfcI	CTRYAG	1 cut(s)	1599
SfoI	GGCGCC	2 cut(s)	94, 1488
SfuI	TTCGAA	1 cut(s)	664
SinI	GGWCC	2 cut(s)	355, 533
SmiMI	CAYNNNNRTG	1 cut(s)	587
SmlI	CTYRAG	4 cut(s)	137, 320, 645, 1076
SmoI	CTYRAG	4 cut(s)	137, 320, 645, 1076
SphI	GCATGC	1 cut(s)	444
SseBI	AGGCCT	1 cut(s)	690
SsiI	CCGC	1 cut(s)	28
SspDI	GGCGCC	2 cut(s)	92, 1486
SspMI	CTAG	2 cut(s)	1803, 1854
SstI	GAGCTC	2 cut(s)	1644, 1761
StuI	AGGCCT	1 cut(s)	690
StyD4I	CCNGG	4 cut(s)	124, 303, 654, 790
StyI	CCWWGG	4 cut(s)	685, 773, 1245, 1545
TaaI	ACNGT	7 cut(s)	359, 745, 920, 1504, 1530, 1666, 1812
TaiI	ACGT	3 cut(s)	732, 1624, 1633
TaqI	TCGA	7 cut(s)	545, 664, 747, 1161, 1368, 1610, 1693
TaqII	GACCGA	1 cut(s)	1672
TatI	WGTACW	1 cut(s)	829
TfiI	GAWTC	3 cut(s)	1516, 1670, 1821
Tru1I	TTAA	7 cut(s)	276, 447, 809, 1296, 1326, 1473, 1494
Tru9I	TTAA	7 cut(s)	276, 447, 809, 1296, 1326, 1473, 1494
TscAI	CASTG	4 cut(s)	37, 268, 556, 1768
TseFI	GTSAC	3 cut(s)	1309, 1684, 1797
TseI	GCWGC	4 cut(s)	129, 628, 965, 1571
Tsp45I	GTSAC	3 cut(s)	1309, 1684, 1797
TspDTI	ATGAA	9 cut(s)	167, 195, 795, 859, 867, 1101, 1221, 1241, 1464
TspGWI	ACGGA	2 cut(s)	525, 1709
TspRI	CASTG	4 cut(s)	37, 268, 556, 1768
VneI	GTGCAC	1 cut(s)	1498
VpaK11BI	GGWCC	2 cut(s)	355, 533
VspI	ATTAAT	1 cut(s)	809
XagI	CCTNNNNNAGG	1 cut(s)	684
XapI	RAATTY	4 cut(s)	592, 734, 1215, 1349
XbaI	TCTAGA	1 cut(s)	1853
XceI	RCATGY	3 cut(s)	193, 444, 1289
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1252
XmiI	GTMKAC	1 cut(s)	747
XmnI	GAANNNNTTC	1 cut(s)	1820
XspI	CTAG	2 cut(s)	1803, 1854
Zsp2I	ATGCAT	1 cut(s)	446

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.