Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0001310

Physical Location & Seq

Genomic Coordinates Forward (+)

53694443 .. 53697387

Gene Structure 2945 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ39756

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1560 bp

ATGAGTGATGATACAGAAAGCTCCCGCCGTGCTCTGGGCAACACTCTTGAACGGCGCTTCTTTTACATCCCGTCTTTCAAGATTTACGGCGCCGTTGCTGGCCTCTACGACTATGGCTCGCCCGGCTGCAAACTCAAGAAGAATGTCCTTTCACTTTGGCATCAGGATAAGAAGAAAGGGACTTGCTACCGGGCTGATCACTTGCTCAAGGATTTCTGCAATAAGAAGCTTGAAGAGGACCGTCACATTAGTTCAGAGATGGCAATGGAGCTGAAAGAAGTGCTTTCGAAATTGGACGGTCTATCAGCTGAAGAGCTGGGTGCATGCATCAAGAAATATGGGATTACAGCCCCTGAAACAGATAACCATCCTCTCTCAGATCCTTATCCTTTCAATTTGATGTTTCAAACATCAATTGGTCCGTCTGGTTCGAGCACTGGTTTCTTTCGCCCAGAAACTGCGCAAGGCATATTTGTGAATTTTATGGACATTTACTATGACAATGGGTGCAAGCTGCCTTGTGCTGTTGCTCAAGTTGGCCAGGCTTTTCGAAACGAGATATCTCCTCGCCAAGGCCTGTTGAGAGTCCGTGAGTTCACACTCGCAGAGATTGAGCACTTTGTTGATCCTAAAGACAAATCTCACCTGAAATTCCCCAGCGTTGAGAAGTTGGAACTTCTGATGTTCCCAAGGGATGAACAAAAGCCTGGGCAATCTGCAAGATTAATCAAAGTGGGTGAAGCGGTGCATTCTAAGGTATATCTCTTCCTCACTCGTCTGGGTATAGACAAGAACCGTTTGAGGTTCAGGCAACACCTTGCTAAAGAAATGGCTCACTATGCTGCTGACTGCTGGGATGCTGAGATTGAGACTTCCTATGGCTGGATTGAGTGTGTCGTTATTGCAGATAGATCTGCATATGACTTGAAGGCTCATTCGGGGAAAAGTCGTTTTGAGGCACATGAACAACTTTCAGAACCAAGAGACGTGGAGATATTGGTTATATCTCCGGTAAAGAAACAGCTTGGCCCTGCTTTCGGGAAGAAGCAAAAGAATGTGCTTGAAGCTTTGGAGGCTATGAATGAAGAAGAAATTTCAAAGATGAAGGCTGAGTTAGACTCGAAAGGGGAGGTGGACTTCTTTGTCTGCACTCTTGGGGAACATGTATCTATTAAGAGCAGTATGGTGACAATTTCAAAGGTTAAAGCAAGAGAACATCAAAGAAAATTCACACCCTCAGTAATCGAGCCTTCATTTGGTATTGGGCGGATTATATATCGTCTCTTTGAGCATTCCTTTTACCCCAGACCAGATAAAACTGGGGATGAACAATTGAATGTGTTTCGCTTTAACCCACTTGTGGCGCCTTTTAAGTGCACGGTTTTCCCTCTGGTTCGGAACCAACAATTTGAGGCTGTTGCTAAGGACATTTCCAAGTCATTGACTGCTGCTGGCATATCGCATAAAATGGATACTACAGGTACCTCAATTGGGAAACGTTATGCACGTACTGATGAGCTCGGTGTACCCTTTGCGATAATGGTTGATTCTACATCCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000959 GO:0003674 GO:0003824 GO:0004812 GO:0004820 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005768 GO:0005794 GO:0005802 GO:0005829 GO:0006082 GO:0006139 GO:0006399 GO:0006412 GO:0006418 GO:0006426 GO:0006518 GO:0006520 GO:0006725 GO:0006753 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009117 GO:0009165 GO:0009987 GO:0010035 GO:0010038 GO:0010467 GO:0012505 GO:0015959 GO:0015960 GO:0015965 GO:0015966 GO:0016070 GO:0016874 GO:0016875 GO:0018130 GO:0019438 GO:0019538 GO:0019637 GO:0019752 GO:0031410 GO:0031982 GO:0031984 GO:0032543 GO:0034641 GO:0034645 GO:0034654 GO:0034660 GO:0042221 GO:0043038 GO:0043039 GO:0043043 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0043603 GO:0043604 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044281 GO:0044422 GO:0044424 GO:0044431 GO:0044444 GO:0044446 GO:0044464 GO:0046483 GO:0046686 GO:0046983 GO:0050896 GO:0055086 GO:0070127 GO:0070150 GO:0071704 GO:0090304 GO:0090407 GO:0097708 GO:0098791 GO:0140053 GO:0140098 GO:0140101 GO:1901293 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00970 map00970

Pfam Domains

Protein Families

HGTP_anticodon WHEP-TRS tRNA-synt_2b

Protein Analysis

519

Amino Acids

58.69

Weight (kDa)

8.17

Isoelectric Point (pI)

41.66

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
tRNA-synt_2b	PF00587	150 - 224	4.1e-07	tRNA synthetase class II core domain (G, H, P, S and T)
HGTP_anticodon	PF03129	458 - 517	1.9e-11	Anticodon binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0001310)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G29880
fragaria_vesca	FvH4_4g22441 FvH4_4g22450 FvH4_4g22450 FvH4_4g22610 FvH4_4g22610
malus_domestica	MD13G1131000.v1.1 MD13G1145800.v1.1 MD16G1141200.v1.1
prunus_persica	Prupe.1G214600_v2.0.a1
pyrus_communis	pycom13g11430 pycom13g12530 pycom16g11160 pycom16g11170
rosa_chinensis	RchiOBHm_Chr1g0361881 RchiOBHm_Chr4g0428711 RchiOBHm_Chr4g0428851
rosa_laevigata	RLG00000007120 RLG00000007133 RLG00000027689 RLG00000027690 RLG00000027694
rosa_multiflora	Rmu_co8208336.1_g000001 Rmu_co8210234.1_g000001 Rmu_sc0003316.1_g000006 Rmu_sc0008612.1_g000003 Rmu_sc0018216.1_g000001 Rmu_ssc0000124.1_g000013
rosa_roxburghii	Rroxscaffold_4G00294630 Rroxscaffold_5G00370530
rosa_rugosa	Rorug01G0292100 Rorug04G0227400 Rorug04G0227500 Rorug04G0229700
rosa_samantha	Rh1AG302800 Rh1BG265900 Rh1BG266000 Rh1CG284000 Rh1DG295900 Rh1DG296000 Rh4AG284700 Rh4AG284900 Rh4AG286400 Rh4BG290700 Rh4BG290900 Rh4BG292200 Rh4CG308200 Rh4DG288200 Rh4DG289400
rosa_wichuraiana	Rw0G020620 Rw1G026830 Rw4G024720 Rw4G024830 Rw7G040280

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1142
Acc16I	TGCGCA	1 cut(s)	462
Acc65I	GGTACC	1 cut(s)	1481
AccB1I	GGYRCC	3 cut(s)	89, 1363, 1481
AciI	CCGC	3 cut(s)	25, 743, 1267
AclI	AACGTT	1 cut(s)	1498
AclWI	GGATC	2 cut(s)	374, 620
AcoI	YGGCCR	1 cut(s)	538
AcsI	RAATTY	4 cut(s)	478, 650, 1092, 1226
AcuI	CTGAAG	1 cut(s)	330
AcyI	GRCGYC	2 cut(s)	90, 1364
AfaI	GTAC	3 cut(s)	1483, 1510, 1527
AfiI	CCNNNNNNNGG	7 cut(s)	34, 572, 882, 1037, 1256, 1360, 1491
AflIII	ACRYGT	1 cut(s)	1162
AjiI	CACGTC	1 cut(s)	988
AjnI	CCWGG	2 cut(s)	540, 706
AluBI	AGCT	9 cut(s)	21, 229, 271, 308, 316, 514, 1024, 1067, 1519
AluI	AGCT	9 cut(s)	21, 229, 271, 308, 316, 514, 1024, 1067, 1519
Alw21I	GWGCWC	5 cut(s)	34, 437, 618, 1379, 1521
Alw26I	GTCTC	3 cut(s)	863, 978, 1286
Alw44I	GTGCAC	1 cut(s)	1375
AlwI	GGATC	2 cut(s)	374, 620
AlwNI	CAGNNNCTG	2 cut(s)	353, 458
AoxI	GGCC	4 cut(s)	100, 538, 574, 1027
ApaLI	GTGCAC	1 cut(s)	1375
ApeKI	GCWGC	4 cut(s)	126, 514, 842, 1448
ApoI	RAATTY	4 cut(s)	478, 650, 1092, 1226
AseI	ATTAAT	1 cut(s)	725
Asp718I	GGTACC	1 cut(s)	1481
AspLEI	GCGC	4 cut(s)	57, 92, 463, 1366
AspS9I	GGNCC	3 cut(s)	238, 419, 1028
AsuC2I	CCSGG	2 cut(s)	123, 191
AsuHPI	GGTGA	3 cut(s)	635, 749, 1198
AsuII	TTCGAA	2 cut(s)	287, 550
AvaII	GGWCC	2 cut(s)	238, 419
BaeGI	GKGCMC	1 cut(s)	1379
BalI	TGGCCA	1 cut(s)	540
BanI	GGYRCC	3 cut(s)	89, 1363, 1481
BanII	GRGCYC	1 cut(s)	1521
Bbv12I	GWGCWC	5 cut(s)	34, 437, 618, 1379, 1521
BbvI	GCAGC	4 cut(s)	113, 501, 829, 1435
BccI	CCATC	2 cut(s)	253, 375
BceAI	ACGGC	4 cut(s)	12, 68, 77, 103
BciT130I	CCWGG	2 cut(s)	542, 708
BciVI	GTATCC	1 cut(s)	1465
BclI	TGATCA	1 cut(s)	196
BcnI	CCSGG	2 cut(s)	123, 191
BcoDI	GTCTC	3 cut(s)	863, 978, 1286
BfaI	CTAG	1 cut(s)	1558
BfmI	CTRYAG	1 cut(s)	1476
BfoI	RGCGCY	3 cut(s)	58, 93, 1367
BfuI	GTATCC	1 cut(s)	1465
BglII	AGATCT	1 cut(s)	911
BisI	GCNGC	4 cut(s)	127, 515, 843, 1449
BlsI	GCNGC	4 cut(s)	128, 516, 844, 1450
Bme1390I	CCNGG	4 cut(s)	123, 191, 542, 708
Bme18I	GGWCC	2 cut(s)	238, 419
BmgBI	CACGTC	1 cut(s)	988
BmgT120I	GGNCC	3 cut(s)	238, 419, 1028
BmiI	GGNNCC	4 cut(s)	91, 1365, 1400, 1483
BmrFI	CCNGG	4 cut(s)	123, 191, 542, 708
BmrI	ACTGGG	1 cut(s)	1329
BmsI	GCATC	3 cut(s)	169, 336, 847
BmuI	ACTGGG	1 cut(s)	1329
BplI	GAGNNNNNCTC	2 cut(s)	1103, 1135
Bpu10I	CCTNAGC	1 cut(s)	1422
Bpu14I	TTCGAA	2 cut(s)	287, 550
BpuEI	CTTGAG	3 cut(s)	119, 191, 516
BpuMI	CCSGG	2 cut(s)	123, 191
BsaAI	YACGTR	1 cut(s)	1508
BsaBI	GATNNNNATC	2 cut(s)	366, 384
BsaHI	GRCGYC	2 cut(s)	90, 1364
BsaJI	CCNNGG	3 cut(s)	571, 689, 707
BsaWI	WCCGGW	1 cut(s)	1009
Bsc4I	CCNNNNNNNGG	7 cut(s)	34, 572, 882, 1037, 1256, 1360, 1491
Bse1I	ACTGG	2 cut(s)	442, 1324
Bse3DI	GCAATG	1 cut(s)	270
Bse8I	GATNNNNATC	2 cut(s)	366, 384
BseBI	CCWGG	2 cut(s)	542, 708
BseDI	CCNNGG	3 cut(s)	571, 689, 707
BseGI	GGATG	6 cut(s)	66, 367, 700, 862, 1330, 1553
BseJI	GATNNNNATC	2 cut(s)	366, 384
BseLI	CCNNNNNNNGG	7 cut(s)	34, 572, 882, 1037, 1256, 1360, 1491
BseMI	GCAATG	1 cut(s)	270
BseMII	CTCAG	4 cut(s)	390, 852, 1101, 1251
BseNI	ACTGG	2 cut(s)	442, 1324
BseRI	GAGGAG	1 cut(s)	555
BseSI	GKGCMC	1 cut(s)	1379
BseXI	GCAGC	4 cut(s)	113, 501, 829, 1435
BseYI	CCCAGC	3 cut(s)	316, 656, 852
BsgI	GTGCAG	1 cut(s)	1132
BshFI	GGCC	4 cut(s)	102, 540, 576, 1029
BshNI	GGYRCC	3 cut(s)	89, 1363, 1481
BsiHKAI	GWGCWC	5 cut(s)	34, 437, 618, 1379, 1521
BsiSI	CCGG	3 cut(s)	123, 190, 1010
BslFI	GGGAC	1 cut(s)	193
BslI	CCNNNNNNNGG	7 cut(s)	34, 572, 882, 1037, 1256, 1360, 1491
BsmAI	GTCTC	3 cut(s)	863, 978, 1286
BsmBI	CGTCTC	2 cut(s)	978, 1286
BsmFI	GGGAC	1 cut(s)	193
BsmI	GAATGC	2 cut(s)	748, 1291
BsnI	GGCC	4 cut(s)	102, 540, 576, 1029
Bsp119I	TTCGAA	2 cut(s)	287, 550
Bsp1286I	GDGCHC	5 cut(s)	34, 437, 618, 1379, 1521
Bsp143I	GATC	4 cut(s)	196, 379, 625, 911
BspACI	CCGC	3 cut(s)	25, 743, 1267
BspANI	GGCC	4 cut(s)	102, 540, 576, 1029
BspCNI	CTCAG	4 cut(s)	389, 853, 1102, 1250
BspLI	GGNNCC	4 cut(s)	91, 1365, 1400, 1483
BspPI	GGATC	2 cut(s)	374, 620
BspQI	GCTCTTC	1 cut(s)	306
BspT104I	TTCGAA	2 cut(s)	287, 550
BspT107I	GGYRCC	3 cut(s)	89, 1363, 1481
BsrDI	GCAATG	1 cut(s)	270
BsrI	ACTGG	2 cut(s)	442, 1324
BssECI	CCNNGG	3 cut(s)	571, 689, 707
BssMI	GATC	4 cut(s)	196, 379, 625, 911
BssNI	GRCGYC	2 cut(s)	90, 1364
BssT1I	CCWWGG	2 cut(s)	571, 689
Bst2UI	CCWGG	2 cut(s)	542, 708
Bst4CI	ACNGT	4 cut(s)	242, 299, 797, 1381
Bst6I	CTCTTC	3 cut(s)	228, 306, 770
BstACI	GRCGYC	2 cut(s)	90, 1364
BstBAI	YACGTR	1 cut(s)	1508
BstBI	TTCGAA	2 cut(s)	287, 550
BstC8I	GCNNGC	5 cut(s)	100, 119, 325, 512, 1453
BstDEI	CTNAG	6 cut(s)	376, 753, 861, 1110, 1237, 1422
BstENI	CCTNNNNNAGG	1 cut(s)	570
BstF5I	GGATG	6 cut(s)	66, 367, 700, 862, 1330, 1553
BstH2I	RGCGCY	3 cut(s)	58, 93, 1367
BstHHI	GCGC	4 cut(s)	57, 92, 463, 1366
BstKTI	GATC	4 cut(s)	199, 382, 628, 914
BstMAI	GTCTC	3 cut(s)	863, 978, 1286
BstMBI	GATC	4 cut(s)	196, 379, 625, 911
BstMWI	GCNNNNNNNGC	3 cut(s)	123, 839, 1073
BstNI	CCWGG	2 cut(s)	542, 708
BstNSI	RCATGY	2 cut(s)	327, 1166
BstSCI	CCNGG	4 cut(s)	121, 189, 540, 706
BstSFI	CTRYAG	1 cut(s)	1476
BstSLI	GKGCMC	1 cut(s)	1379
BstV1I	GCAGC	4 cut(s)	113, 501, 829, 1435
BstX2I	RGATCY	2 cut(s)	379, 911
BstYI	RGATCY	2 cut(s)	379, 911
BsuI	GTATCC	1 cut(s)	1465
BsuRI	GGCC	4 cut(s)	102, 540, 576, 1029
BtrI	CACGTC	1 cut(s)	988
BtsCI	GGATG	6 cut(s)	66, 367, 700, 862, 1330, 1553
BtsIMutI	CAGTG	1 cut(s)	435
Cac8I	GCNNGC	5 cut(s)	100, 119, 325, 512, 1453
CaiI	CAGNNNCTG	2 cut(s)	353, 458
CfoI	GCGC	4 cut(s)	57, 92, 463, 1366
Cfr13I	GGNCC	3 cut(s)	238, 419, 1028
Csp6I	GTAC	3 cut(s)	1482, 1509, 1526
CspCI	CAANNNNNGTGG	2 cut(s)	969, 1004
CviAII	CATG	3 cut(s)	324, 962, 1163
CviQI	GTAC	3 cut(s)	1482, 1509, 1526
DdeI	CTNAG	6 cut(s)	376, 753, 861, 1110, 1237, 1422
DinI	GGCGCC	2 cut(s)	91, 1365
DpnI	GATC	4 cut(s)	198, 381, 627, 913
DpnII	GATC	4 cut(s)	196, 379, 625, 911
DrdI	GACNNNNNNGTC	1 cut(s)	1142
DseDI	GACNNNNNNGTC	1 cut(s)	1142
EaeI	YGGCCR	1 cut(s)	538
Eam1104I	CTCTTC	3 cut(s)	228, 306, 770
EarI	CTCTTC	3 cut(s)	228, 306, 770
EciI	GGCGGA	1 cut(s)	1282
Ecl136II	GAGCTC	1 cut(s)	1519
Eco130I	CCWWGG	2 cut(s)	571, 689
Eco147I	AGGCCT	1 cut(s)	576
Eco24I	GRGCYC	1 cut(s)	1521
Eco32I	GATATC	1 cut(s)	561
Eco47I	GGWCC	2 cut(s)	238, 419
Eco53kI	GAGCTC	1 cut(s)	1519
Eco57I	CTGAAG	1 cut(s)	330
EcoICRI	GAGCTC	1 cut(s)	1519
EcoNI	CCTNNNNNAGG	1 cut(s)	570
EcoRII	CCWGG	2 cut(s)	540, 706
EcoRV	GATATC	1 cut(s)	561
EcoT14I	CCWWGG	2 cut(s)	571, 689
EcoT22I	ATGCAT	1 cut(s)	329
EcoT38I	GRGCYC	1 cut(s)	1521
EgeI	GGCGCC	2 cut(s)	91, 1365
EheI	GGCGCC	2 cut(s)	91, 1365
ErhI	CCWWGG	2 cut(s)	571, 689
Esp3I	CGTCTC	2 cut(s)	978, 1286
FaeI	CATG	3 cut(s)	327, 965, 1166
FalI	AAGNNNNNCTT	2 cut(s)	267, 299
FaqI	GGGAC	1 cut(s)	193
FatI	CATG	3 cut(s)	323, 961, 1162
FauI	CCCGC	1 cut(s)	32
FauNDI	CATATG	1 cut(s)	919
FbaI	TGATCA	1 cut(s)	196
Fnu4HI	GCNGC	4 cut(s)	127, 515, 843, 1449
FokI	GGATG	6 cut(s)	53, 354, 707, 869, 1337, 1540
FriOI	GRGCYC	1 cut(s)	1521
Fsp4HI	GCNGC	4 cut(s)	127, 515, 843, 1449
FspBI	CTAG	1 cut(s)	1558
FspI	TGCGCA	1 cut(s)	462
GlaI	GCGC	4 cut(s)	56, 91, 462, 1365
GluI	GCNGC	4 cut(s)	127, 515, 843, 1449
GsaI	CCCAGC	3 cut(s)	320, 660, 856
HaeII	RGCGCY	3 cut(s)	58, 93, 1367
HaeIII	GGCC	4 cut(s)	102, 540, 576, 1029
HapII	CCGG	3 cut(s)	123, 190, 1010
HhaI	GCGC	4 cut(s)	57, 92, 463, 1366
Hin1I	GRCGYC	2 cut(s)	90, 1364
Hin1II	CATG	3 cut(s)	327, 965, 1166
Hin6I	GCGC	4 cut(s)	55, 90, 461, 1364
HinP1I	GCGC	4 cut(s)	55, 90, 461, 1364
HindIII	AAGCTT	2 cut(s)	227, 1065
HinfI	GANTC	3 cut(s)	585, 1118, 1547
HpaII	CCGG	3 cut(s)	123, 190, 1010
HphI	GGTGA	3 cut(s)	635, 749, 1198
Hpy166II	GTNNAC	4 cut(s)	597, 1135, 1377, 1526
Hpy188I	TCNGA	5 cut(s)	256, 379, 681, 976, 1398
Hpy188III	TCNNGA	6 cut(s)	47, 79, 136, 164, 331, 1039
Hpy8I	GTNNAC	4 cut(s)	597, 1135, 1377, 1526
HpyAV	CCTTC	3 cut(s)	922, 1099, 1260
HpyCH4III	ACNGT	4 cut(s)	242, 299, 797, 1381
HpyCH4IV	ACGT	3 cut(s)	987, 1498, 1507
HpyF10VI	GCNNNNNNNGC	3 cut(s)	123, 839, 1073
HpyF3I	CTNAG	6 cut(s)	376, 753, 861, 1110, 1237, 1422
HpySE526I	ACGT	3 cut(s)	987, 1498, 1507
Hsp92I	GRCGYC	2 cut(s)	90, 1364
Hsp92II	CATG	3 cut(s)	327, 965, 1166
HspAI	GCGC	4 cut(s)	55, 90, 461, 1364
KasI	GGCGCC	2 cut(s)	89, 1363
KpnI	GGTACC	1 cut(s)	1485
Ksp22I	TGATCA	1 cut(s)	196
Kzo9I	GATC	4 cut(s)	196, 379, 625, 911
LguI	GCTCTTC	1 cut(s)	306
LmnI	GCTCC	2 cut(s)	26, 268
Lsp1109I	GCAGC	4 cut(s)	113, 501, 829, 1435
LweI	GCATC	3 cut(s)	169, 336, 847
MaeI	CTAG	1 cut(s)	1558
MaeII	ACGT	3 cut(s)	987, 1498, 1507
MaeIII	GTNAC	2 cut(s)	242, 1186
MalI	GATC	4 cut(s)	198, 381, 627, 913
MboI	GATC	4 cut(s)	196, 379, 625, 911
MboII	GAAGA	8 cut(s)	151, 184, 245, 323, 757, 1054, 1097, 1100
MfeI	CAATTG	3 cut(s)	414, 1331, 1488
MflI	RGATCY	2 cut(s)	379, 911
MhlI	GDGCHC	5 cut(s)	34, 437, 618, 1379, 1521
MlsI	TGGCCA	1 cut(s)	540
MluNI	TGGCCA	1 cut(s)	540
Mly113I	GGCGCC	2 cut(s)	90, 1364
MlyI	GAGTC	2 cut(s)	594, 1112
MmeI	TCCRAC	1 cut(s)	651
Mox20I	TGGCCA	1 cut(s)	540
Mph1103I	ATGCAT	1 cut(s)	329
MscI	TGGCCA	1 cut(s)	540
MseI	TTAA	5 cut(s)	725, 1173, 1203, 1350, 1371
MslI	CAYNNNNRTG	1 cut(s)	473
Msp20I	TGGCCA	1 cut(s)	540
MspA1I	CMGCKG	1 cut(s)	308
MspI	CCGG	3 cut(s)	123, 190, 1010
MspR9I	CCNGG	4 cut(s)	123, 191, 542, 708
MunI	CAATTG	3 cut(s)	414, 1331, 1488
Mva1269I	GAATGC	2 cut(s)	748, 1291
MvaI	CCWGG	2 cut(s)	542, 708
MwoI	GCNNNNNNNGC	3 cut(s)	123, 839, 1073
NarI	GGCGCC	2 cut(s)	90, 1364
NciI	CCSGG	2 cut(s)	123, 191
NdeI	CATATG	1 cut(s)	919
NdeII	GATC	4 cut(s)	196, 379, 625, 911
NlaIII	CATG	3 cut(s)	327, 965, 1166
NlaIV	GGNNCC	4 cut(s)	91, 1365, 1400, 1483
NmuCI	GTSAC	2 cut(s)	242, 1186
NsbI	TGCGCA	1 cut(s)	462
NsiI	ATGCAT	1 cut(s)	329
NspI	RCATGY	2 cut(s)	327, 1166
NspV	TTCGAA	2 cut(s)	287, 550
PaeI	GCATGC	1 cut(s)	327
PceI	AGGCCT	1 cut(s)	576
PciI	ACATGT	1 cut(s)	1162
PciSI	GCTCTTC	1 cut(s)	306
PcsI	WCGNNNNNNNCGW	1 cut(s)	1504
PctI	GAATGC	2 cut(s)	748, 1291
PfeI	GAWTC	1 cut(s)	1547
PkrI	GCNGC	4 cut(s)	128, 516, 844, 1450
PleI	GAGTC	2 cut(s)	593, 1112
PluTI	GGCGCC	2 cut(s)	93, 1367
PpsI	GAGTC	2 cut(s)	593, 1112
Ppu21I	YACGTR	1 cut(s)	1508
PscI	ACATGT	1 cut(s)	1162
PshBI	ATTAAT	1 cut(s)	725
Psp124BI	GAGCTC	1 cut(s)	1521
Psp1406I	AACGTT	1 cut(s)	1498
Psp6I	CCWGG	2 cut(s)	540, 706
PspFI	CCCAGC	3 cut(s)	316, 656, 852
PspGI	CCWGG	2 cut(s)	540, 706
PspN4I	GGNNCC	4 cut(s)	91, 1365, 1400, 1483
PspPI	GGNCC	3 cut(s)	238, 419, 1028
PstNI	CAGNNNCTG	2 cut(s)	353, 458
PsuI	RGATCY	2 cut(s)	379, 911
PvuII	CAGCTG	1 cut(s)	308
RsaI	GTAC	3 cut(s)	1483, 1510, 1527
RsaNI	GTAC	3 cut(s)	1482, 1509, 1526
RseI	CAYNNNNRTG	1 cut(s)	473
SacI	GAGCTC	1 cut(s)	1521
SapI	GCTCTTC	1 cut(s)	306
SaqAI	TTAA	5 cut(s)	725, 1173, 1203, 1350, 1371
SatI	GCNGC	4 cut(s)	127, 515, 843, 1449
Sau3AI	GATC	4 cut(s)	196, 379, 625, 911
Sau96I	GGNCC	3 cut(s)	238, 419, 1028
SchI	GAGTC	2 cut(s)	594, 1112
ScrFI	CCNGG	4 cut(s)	123, 191, 542, 708
SduI	GDGCHC	5 cut(s)	34, 437, 618, 1379, 1521
SfaNI	GCATC	3 cut(s)	169, 336, 847
SfcI	CTRYAG	1 cut(s)	1476
SfoI	GGCGCC	2 cut(s)	91, 1365
SfuI	TTCGAA	2 cut(s)	287, 550
SinI	GGWCC	2 cut(s)	238, 419
SmiMI	CAYNNNNRTG	1 cut(s)	473
SmlI	CTYRAG	3 cut(s)	134, 206, 531
SmoI	CTYRAG	3 cut(s)	134, 206, 531
SphI	GCATGC	1 cut(s)	327
SseBI	AGGCCT	1 cut(s)	576
SsiI	CCGC	3 cut(s)	25, 743, 1267
SspDI	GGCGCC	2 cut(s)	89, 1363
SspMI	CTAG	1 cut(s)	1558
SstI	GAGCTC	1 cut(s)	1521
StuI	AGGCCT	1 cut(s)	576
StyD4I	CCNGG	4 cut(s)	121, 189, 540, 706
StyI	CCWWGG	2 cut(s)	571, 689
TaaI	ACNGT	4 cut(s)	242, 299, 797, 1381
TaiI	ACGT	3 cut(s)	990, 1501, 1510
TaqI	TCGA	5 cut(s)	287, 431, 550, 1121, 1245
TfiI	GAWTC	1 cut(s)	1547
Tru1I	TTAA	5 cut(s)	725, 1173, 1203, 1350, 1371
Tru9I	TTAA	5 cut(s)	725, 1173, 1203, 1350, 1371
TscAI	CASTG	1 cut(s)	442
TseFI	GTSAC	2 cut(s)	242, 1186
TseI	GCWGC	4 cut(s)	126, 514, 842, 1448
Tsp45I	GTSAC	2 cut(s)	242, 1186
TspDTI	ATGAA	7 cut(s)	711, 978, 1094, 1098, 1118, 1242, 1341
TspGWI	ACGGA	2 cut(s)	411, 578
TspRI	CASTG	1 cut(s)	442
VneI	GTGCAC	1 cut(s)	1375
VpaK11BI	GGWCC	2 cut(s)	238, 419
VspI	ATTAAT	1 cut(s)	725
XagI	CCTNNNNNAGG	1 cut(s)	570
XapI	RAATTY	4 cut(s)	478, 650, 1092, 1226
XceI	RCATGY	2 cut(s)	327, 1166
XspI	CTAG	1 cut(s)	1558
Zsp2I	ATGCAT	1 cut(s)	329

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.