Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_ssc0000124.1

Orthogroup ID

OG0001310

Physical Location & Seq

Genomic Coordinates Forward (+)

52105 .. 53997

Gene Structure 1893 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_ssc0000124.1_g000013.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1893 bp

atgagtaataataatacagaaagctcccgcagtgctctggccaacactcttgaacggcgcttcttttacatcccttctttcaagatctacggcgccgttgctggcctctacgactatggctcgcctggctgcaaactcaagaagaatgtcctttcgctttggcatcagcactttgttcatgaagagaacatgtgggagattgactgcccttgtctcacgccagaagctgtcttgaaggcatctggccatgtagataagttcactgacctcatggttaaggatgagaagaaagggacttgctaccgggctgatcacttgctcaaggatttctgcaataacaagcttgaagatcaggaccgtcgcattagtccagagatggcaatggagctgaaacaagtgctttctaaattggatggtctatcagctgaagagctgggtgcatgcatcaagaaatatgggattagagcccccgaaacagataattatctctcagatccttatcctttcaacttgatgtttcaaacatcaattggtccgtccggttcgagcactggtttctttcgcccagaaactgcacaaggcatatttgtgaattttatggacatttactatgacaatgggtgcaagctgccttttgccgttgctcaagttggccaggcttttcgaaacgagatatctccacgccaaggcctgttgagagtccgcgagttcacactcgcggaaattgagcactttgttgatcctgaagacaaatctcacgtcaaattccccaccgtcgacaagttgcaacttcctatgttcccaagggatgaacaaaagccgggccaatctgcaagattaatctctctgggggaagcagtgcattctaagattgtggagaatgaaactcttggctacttcattgggagagtatatctcttcctcactcgtctgggtatagacaagaaccgtataaggttcaggcaacaccttgctaaagagatggctcactatgctgctgactgctgggatgctgagattgagacttcctatggctggattgagtgcgtcggtattgcagatagatctgcatatgacttgaaagctcattcggggaaaagtcgtcttgaggcacatgaacaactttcagaaccaagagaagtggagaaattggttatatctcctgtaaagaaagagattggccctgctttcgagaagaagcaaaagaatgtgcttgaagctttggaggctatggatgaagaagaaatttcaaaaatgaaggccgagttagactccaagggggaggtggacttctttgtctgcactcttggggaacatgtatctattaagagcagtatggtgacaatttcaaaggttaaaacaagagaacatcaaagaaaattcacaccctcagtaatcgagccttcatttggtattgggaggattatatattgtctctttgagcattccttctacaccagaccagataaaacaggggatgaacaattgaatgtgtttcgctttaacccacttgtggcgccttttaagtgcacagttttccctctgattcggaaccaacggtttgaggatgttgccaaggacatttccaagtcattgactgctgctggcatatcgcataaaatagatactacaggtacctcgattgggaaacgttatgcacgtactgatgagctcggtgtaccctttgcaatcacggttgattctacatcctcggtcacaattcgagaaagagacagcaaagatcaaatccgtgttagtgtgaagaaggcagtatctgttgtgaaggagctcagtgaggggtcgaggacttgggaagatttgtggtggtcacctagtcaacggtggaagagattctggcgttcctgctttagatttatattgtctagaaactaa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000959 GO:0003674 GO:0003824 GO:0004812 GO:0004820 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005768 GO:0005794 GO:0005802 GO:0005829 GO:0006082 GO:0006139 GO:0006399 GO:0006412 GO:0006418 GO:0006426 GO:0006518 GO:0006520 GO:0006725 GO:0006753 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009117 GO:0009165 GO:0009987 GO:0010035 GO:0010038 GO:0010467 GO:0012505 GO:0015959 GO:0015960 GO:0015965 GO:0015966 GO:0016070 GO:0016874 GO:0016875 GO:0018130 GO:0019438 GO:0019538 GO:0019637 GO:0019752 GO:0031410 GO:0031982 GO:0031984 GO:0032543 GO:0034641 GO:0034645 GO:0034654 GO:0034660 GO:0042221 GO:0043038 GO:0043039 GO:0043043 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0043603 GO:0043604 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044281 GO:0044422 GO:0044424 GO:0044431 GO:0044444 GO:0044446 GO:0044464 GO:0046483 GO:0046686 GO:0046983 GO:0050896 GO:0055086 GO:0070127 GO:0070150 GO:0071704 GO:0090304 GO:0090407 GO:0097708 GO:0098791 GO:0140053 GO:0140098 GO:0140101 GO:1901293 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00970 map00970

Pfam Domains

Protein Families

HGTP_anticodon WHEP-TRS tRNA-synt_2b

Protein Analysis

630

Amino Acids

71.96

Weight (kDa)

7.55

Isoelectric Point (pI)

43.19

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0001310)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G29880
fragaria_vesca	FvH4_4g22441 FvH4_4g22450 FvH4_4g22450 FvH4_4g22610 FvH4_4g22610
malus_domestica	MD13G1131000.v1.1 MD13G1145800.v1.1 MD16G1141200.v1.1
prunus_persica	Prupe.1G214600_v2.0.a1
pyrus_communis	pycom13g11430 pycom13g12530 pycom16g11160 pycom16g11170
rosa_chinensis	RchiOBHm_Chr1g0361881 RchiOBHm_Chr4g0428711 RchiOBHm_Chr4g0428851
rosa_laevigata	RLG00000007120 RLG00000007133 RLG00000027689 RLG00000027690 RLG00000027694
rosa_multiflora	Rmu_co8208336.1_g000001 Rmu_co8210234.1_g000001 Rmu_sc0003316.1_g000006 Rmu_sc0008612.1_g000003 Rmu_sc0018216.1_g000001 Rmu_ssc0000124.1_g000013
rosa_roxburghii	Rroxscaffold_4G00294630 Rroxscaffold_5G00370530
rosa_rugosa	Rorug01G0292100 Rorug04G0227400 Rorug04G0227500 Rorug04G0229700
rosa_samantha	Rh1AG302800 Rh1BG265900 Rh1BG266000 Rh1CG284000 Rh1DG295900 Rh1DG296000 Rh4AG284700 Rh4AG284900 Rh4AG286400 Rh4BG290700 Rh4BG290900 Rh4BG292200 Rh4CG308200 Rh4DG288200 Rh4DG289400
rosa_wichuraiana	Rw0G020620 Rw1G026830 Rw4G024720 Rw4G024830 Rw7G040280

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1295
Acc65I	GGTACC	1 cut(s)	1634
AccB1I	GGYRCC	3 cut(s)	92, 1516, 1634
AccI	GTMKAC	1 cut(s)	777
AccII	CGCG	2 cut(s)	705, 719
AciI	CCGC	3 cut(s)	28, 703, 719
AclI	AACGTT	1 cut(s)	1651
AclWI	GGATC	2 cut(s)	488, 734
AcoI	YGGCCR	3 cut(s)	39, 244, 652
AcsI	RAATTY	4 cut(s)	592, 764, 1245, 1379
AcuI	CTGAAG	2 cut(s)	447, 765
AcyI	GRCGYC	2 cut(s)	93, 1517
AfaI	GTAC	3 cut(s)	1636, 1663, 1680
AfiI	CCNNNNNNNGG	5 cut(s)	686, 1035, 1409, 1513, 1644
AflIII	ACRYGT	2 cut(s)	189, 1315
AjiI	CACGTC	1 cut(s)	760
AjnI	CCWGG	2 cut(s)	124, 654
Alw21I	GWGCWC	6 cut(s)	37, 551, 732, 1532, 1674, 1791
Alw26I	GTCTC	4 cut(s)	218, 1016, 1439, 1725
Alw44I	GTGCAC	1 cut(s)	1528
AlwI	GGATC	2 cut(s)	488, 734
AlwNI	CAGNNNCTG	3 cut(s)	227, 572, 1775
AoxI	GGCC	8 cut(s)	39, 103, 244, 652, 688, 823, 1180, 1260
ApaLI	GTGCAC	1 cut(s)	1528
ApeKI	GCWGC	4 cut(s)	129, 628, 995, 1601
ApoI	RAATTY	4 cut(s)	592, 764, 1245, 1379
ArsI	GACNNNNNNTTYG	2 cut(s)	744, 776
AseI	ATTAAT	1 cut(s)	839
Asp700I	GAANNNNTTC	1 cut(s)	1850
Asp718I	GGTACC	1 cut(s)	1634
AspLEI	GCGC	3 cut(s)	60, 95, 1519
AspS9I	GGNCC	4 cut(s)	355, 533, 823, 1181
AsuC2I	CCSGG	2 cut(s)	305, 822
AsuHPI	GGTGA	2 cut(s)	1351, 1821
AsuII	TTCGAA	1 cut(s)	664
AvaII	GGWCC	2 cut(s)	355, 533
BaeGI	GKGCMC	1 cut(s)	1532
BalI	TGGCCA	3 cut(s)	41, 246, 654
BanI	GGYRCC	3 cut(s)	92, 1516, 1634
BanII	GRGCYC	3 cut(s)	469, 1674, 1791
BbsI	GAAGAC	1 cut(s)	753
Bbv12I	GWGCWC	6 cut(s)	37, 551, 732, 1532, 1674, 1791
BbvI	GCAGC	4 cut(s)	116, 615, 982, 1588
BccI	CCATC	3 cut(s)	370, 407, 976
BceAI	ACGGC	4 cut(s)	71, 80, 106, 623
BciT130I	CCWGG	2 cut(s)	126, 656
BclI	TGATCA	1 cut(s)	310
BcnI	CCSGG	2 cut(s)	305, 822
BcoDI	GTCTC	4 cut(s)	218, 1016, 1439, 1725
BfaI	CTAG	2 cut(s)	1833, 1884
BfmI	CTRYAG	1 cut(s)	1629
BfoI	RGCGCY	3 cut(s)	61, 96, 1520
BglII	AGATCT	2 cut(s)	84, 1064
BisI	GCNGC	4 cut(s)	130, 629, 996, 1602
BlsI	GCNGC	4 cut(s)	131, 630, 997, 1603
Bme1390I	CCNGG	4 cut(s)	126, 305, 656, 822
Bme18I	GGWCC	2 cut(s)	355, 533
BmgBI	CACGTC	1 cut(s)	760
BmgT120I	GGNCC	4 cut(s)	355, 533, 823, 1181
BmiI	GGNNCC	4 cut(s)	94, 1518, 1553, 1636
BmrFI	CCNGG	4 cut(s)	126, 305, 656, 822
BmsI	GCATC	4 cut(s)	172, 248, 453, 1000
BpiI	GAAGAC	1 cut(s)	753
BplI	GAGNNNNNCTC	4 cut(s)	900, 932, 1256, 1288
Bpu14I	TTCGAA	1 cut(s)	664
BpuEI	CTTGAG	4 cut(s)	122, 305, 630, 1127
BpuMI	CCSGG	2 cut(s)	305, 822
BsaAI	YACGTR	1 cut(s)	1661
BsaBI	GATNNNNATC	2 cut(s)	483, 498
BsaHI	GRCGYC	2 cut(s)	93, 1517
BsaJI	CCNNGG	5 cut(s)	685, 803, 1275, 1575, 1710
BsaWI	WCCGGW	1 cut(s)	539
Bsc4I	CCNNNNNNNGG	5 cut(s)	686, 1035, 1409, 1513, 1644
Bse1I	ACTGG	1 cut(s)	556
Bse3DI	GCAATG	1 cut(s)	387
Bse8I	GATNNNNATC	2 cut(s)	483, 498
BseBI	CCWGG	2 cut(s)	126, 656
BseDI	CCNNGG	5 cut(s)	685, 803, 1275, 1575, 1710
BseGI	GGATG	9 cut(s)	69, 286, 418, 814, 1015, 1240, 1483, 1573, 1706
BseJI	GATNNNNATC	2 cut(s)	483, 498
BseLI	CCNNNNNNNGG	5 cut(s)	686, 1035, 1409, 1513, 1644
BseMI	GCAATG	1 cut(s)	387
BseMII	CTCAG	4 cut(s)	504, 1005, 1404, 1804
BseNI	ACTGG	1 cut(s)	556
BseSI	GKGCMC	1 cut(s)	1532
BseXI	GCAGC	4 cut(s)	116, 615, 982, 1588
BseYI	CCCAGC	2 cut(s)	433, 1005
BsgI	GTGCAG	2 cut(s)	558, 1285
Bsh1236I	CGCG	2 cut(s)	705, 719
BshFI	GGCC	8 cut(s)	41, 105, 246, 654, 690, 825, 1182, 1262
BshNI	GGYRCC	3 cut(s)	92, 1516, 1634
BsiHKAI	GWGCWC	6 cut(s)	37, 551, 732, 1532, 1674, 1791
BsiSI	CCGG	3 cut(s)	304, 540, 821
BslFI	GGGAC	1 cut(s)	307
BslI	CCNNNNNNNGG	5 cut(s)	686, 1035, 1409, 1513, 1644
BsmAI	GTCTC	4 cut(s)	218, 1016, 1439, 1725
BsmFI	GGGAC	1 cut(s)	307
BsmI	GAATGC	2 cut(s)	862, 1444
BsnI	GGCC	8 cut(s)	41, 105, 246, 654, 690, 825, 1182, 1262
Bsp119I	TTCGAA	1 cut(s)	664
Bsp1286I	GDGCHC	7 cut(s)	37, 469, 551, 732, 1532, 1674, 1791
Bsp143I	GATC	7 cut(s)	84, 310, 349, 493, 739, 1064, 1741
BspACI	CCGC	3 cut(s)	28, 703, 719
BspANI	GGCC	8 cut(s)	41, 105, 246, 654, 690, 825, 1182, 1262
BspCNI	CTCAG	4 cut(s)	503, 1006, 1403, 1803
BspFNI	CGCG	2 cut(s)	705, 719
BspHI	TCATGA	1 cut(s)	178
BspLI	GGNNCC	4 cut(s)	94, 1518, 1553, 1636
BspPI	GGATC	2 cut(s)	488, 734
BspQI	GCTCTTC	1 cut(s)	423
BspT104I	TTCGAA	1 cut(s)	664
BspT107I	GGYRCC	3 cut(s)	92, 1516, 1634
BsrDI	GCAATG	1 cut(s)	387
BsrI	ACTGG	1 cut(s)	556
BssECI	CCNNGG	5 cut(s)	685, 803, 1275, 1575, 1710
BssMI	GATC	7 cut(s)	84, 310, 349, 493, 739, 1064, 1741
BssNI	GRCGYC	2 cut(s)	93, 1517
BssT1I	CCWWGG	4 cut(s)	685, 803, 1275, 1575
Bst2UI	CCWGG	2 cut(s)	126, 656
Bst4CI	ACNGT	7 cut(s)	359, 775, 950, 1534, 1560, 1696, 1842
Bst6I	CTCTTC	4 cut(s)	177, 423, 923, 1841
BstACI	GRCGYC	2 cut(s)	93, 1517
BstBAI	YACGTR	1 cut(s)	1661
BstBI	TTCGAA	1 cut(s)	664
BstC8I	GCNNGC	5 cut(s)	103, 122, 442, 626, 1606
BstDEI	CTNAG	5 cut(s)	490, 867, 1014, 1390, 1790
BstEII	GGTNACC	1 cut(s)	1827
BstF5I	GGATG	9 cut(s)	69, 286, 418, 814, 1015, 1240, 1483, 1573, 1706
BstFNI	CGCG	2 cut(s)	705, 719
BstH2I	RGCGCY	3 cut(s)	61, 96, 1520
BstHHI	GCGC	3 cut(s)	60, 95, 1519
BstKTI	GATC	7 cut(s)	87, 313, 352, 496, 742, 1067, 1744
BstMAI	GTCTC	4 cut(s)	218, 1016, 1439, 1725
BstMBI	GATC	7 cut(s)	84, 310, 349, 493, 739, 1064, 1741
BstMWI	GCNNNNNNNGC	3 cut(s)	126, 992, 1226
BstNI	CCWGG	2 cut(s)	126, 656
BstNSI	RCATGY	3 cut(s)	193, 444, 1319
BstPI	GGTNACC	1 cut(s)	1827
BstSCI	CCNGG	4 cut(s)	124, 303, 654, 820
BstSFI	CTRYAG	1 cut(s)	1629
BstSLI	GKGCMC	1 cut(s)	1532
BstUI	CGCG	2 cut(s)	705, 719
BstV1I	GCAGC	4 cut(s)	116, 615, 982, 1588
BstV2I	GAAGAC	1 cut(s)	753
BstX2I	RGATCY	3 cut(s)	84, 493, 1064
BstYI	RGATCY	3 cut(s)	84, 493, 1064
BsuRI	GGCC	8 cut(s)	41, 105, 246, 654, 690, 825, 1182, 1262
BtrI	CACGTC	1 cut(s)	760
BtsCI	GGATG	9 cut(s)	69, 286, 418, 814, 1015, 1240, 1483, 1573, 1706
BtsI	GCAGTG	2 cut(s)	37, 864
BtsIMutI	CAGTG	5 cut(s)	37, 261, 549, 864, 1798
Cac8I	GCNNGC	5 cut(s)	103, 122, 442, 626, 1606
CaiI	CAGNNNCTG	3 cut(s)	227, 572, 1775
CciI	TCATGA	1 cut(s)	178
CfoI	GCGC	3 cut(s)	60, 95, 1519
Cfr13I	GGNCC	4 cut(s)	355, 533, 823, 1181
CseI	GACGC	1 cut(s)	1036
Csp6I	GTAC	3 cut(s)	1635, 1662, 1679
CspCI	CAANNNNNGTGG	2 cut(s)	1122, 1157
CviAII	CATG	7 cut(s)	179, 190, 248, 271, 441, 1115, 1316
CviQI	GTAC	3 cut(s)	1635, 1662, 1679
DdeI	CTNAG	5 cut(s)	490, 867, 1014, 1390, 1790
DinI	GGCGCC	2 cut(s)	94, 1518
DpnI	GATC	7 cut(s)	86, 312, 351, 495, 741, 1066, 1743
DpnII	GATC	7 cut(s)	84, 310, 349, 493, 739, 1064, 1741
DrdI	GACNNNNNNGTC	1 cut(s)	1295
DseDI	GACNNNNNNGTC	1 cut(s)	1295
EaeI	YGGCCR	3 cut(s)	39, 244, 652
Eam1104I	CTCTTC	4 cut(s)	177, 423, 923, 1841
EarI	CTCTTC	4 cut(s)	177, 423, 923, 1841
Ecl136II	GAGCTC	2 cut(s)	1672, 1789
Eco130I	CCWWGG	4 cut(s)	685, 803, 1275, 1575
Eco147I	AGGCCT	1 cut(s)	690
Eco24I	GRGCYC	3 cut(s)	469, 1674, 1791
Eco32I	GATATC	1 cut(s)	675
Eco47I	GGWCC	2 cut(s)	355, 533
Eco53kI	GAGCTC	2 cut(s)	1672, 1789
Eco57I	CTGAAG	2 cut(s)	447, 765
Eco91I	GGTNACC	1 cut(s)	1827
EcoICRI	GAGCTC	2 cut(s)	1672, 1789
EcoO65I	GGTNACC	1 cut(s)	1827
EcoRII	CCWGG	2 cut(s)	124, 654
EcoRV	GATATC	1 cut(s)	675
EcoT14I	CCWWGG	4 cut(s)	685, 803, 1275, 1575
EcoT22I	ATGCAT	1 cut(s)	446
EcoT38I	GRGCYC	3 cut(s)	469, 1674, 1791
EgeI	GGCGCC	2 cut(s)	94, 1518
EheI	GGCGCC	2 cut(s)	94, 1518
ErhI	CCWWGG	4 cut(s)	685, 803, 1275, 1575
FaeI	CATG	7 cut(s)	182, 193, 251, 274, 444, 1118, 1319
FaqI	GGGAC	1 cut(s)	307
FatI	CATG	7 cut(s)	178, 189, 247, 270, 440, 1114, 1315
FauI	CCCGC	1 cut(s)	35
FauNDI	CATATG	1 cut(s)	1072
FbaI	TGATCA	1 cut(s)	310
FblI	GTMKAC	1 cut(s)	777
Fnu4HI	GCNGC	4 cut(s)	130, 629, 996, 1602
FokI	GGATG	9 cut(s)	56, 293, 425, 821, 1022, 1247, 1490, 1580, 1693
FriOI	GRGCYC	3 cut(s)	469, 1674, 1791
Fsp4HI	GCNGC	4 cut(s)	130, 629, 996, 1602
FspBI	CTAG	2 cut(s)	1833, 1884
GlaI	GCGC	3 cut(s)	59, 94, 1518
GluI	GCNGC	4 cut(s)	130, 629, 996, 1602
GsaI	CCCAGC	2 cut(s)	437, 1009
HaeII	RGCGCY	3 cut(s)	61, 96, 1520
HaeIII	GGCC	8 cut(s)	41, 105, 246, 654, 690, 825, 1182, 1262
HapII	CCGG	3 cut(s)	304, 540, 821
HgaI	GACGC	1 cut(s)	1036
HhaI	GCGC	3 cut(s)	60, 95, 1519
Hin1I	GRCGYC	2 cut(s)	93, 1517
Hin1II	CATG	7 cut(s)	182, 193, 251, 274, 444, 1118, 1319
Hin6I	GCGC	3 cut(s)	58, 93, 1517
HinP1I	GCGC	3 cut(s)	58, 93, 1517
HincII	GTYRAC	2 cut(s)	778, 1838
HindII	GTYRAC	2 cut(s)	778, 1838
HindIII	AAGCTT	2 cut(s)	341, 1218
HinfI	GANTC	5 cut(s)	699, 1271, 1546, 1700, 1851
HpaII	CCGG	3 cut(s)	304, 540, 821
HphI	GGTGA	2 cut(s)	1351, 1821
Hpy166II	GTNNAC	7 cut(s)	261, 711, 778, 1288, 1530, 1679, 1838
Hpy188I	TCNGA	4 cut(s)	493, 1129, 1545, 1551
Hpy8I	GTNNAC	7 cut(s)	261, 711, 778, 1288, 1530, 1679, 1838
Hpy99I	CGWCG	3 cut(s)	363, 779, 1052
HpyAV	CCTTC	7 cut(s)	84, 229, 1252, 1413, 1459, 1759, 1777
HpyCH4III	ACNGT	7 cut(s)	359, 775, 950, 1534, 1560, 1696, 1842
HpyCH4IV	ACGT	3 cut(s)	759, 1651, 1660
HpyF10VI	GCNNNNNNNGC	3 cut(s)	126, 992, 1226
HpyF3I	CTNAG	5 cut(s)	490, 867, 1014, 1390, 1790
HpySE526I	ACGT	3 cut(s)	759, 1651, 1660
Hsp92I	GRCGYC	2 cut(s)	93, 1517
Hsp92II	CATG	7 cut(s)	182, 193, 251, 274, 444, 1118, 1319
HspAI	GCGC	3 cut(s)	58, 93, 1517
KasI	GGCGCC	2 cut(s)	92, 1516
KpnI	GGTACC	1 cut(s)	1638
Ksp22I	TGATCA	1 cut(s)	310
Kzo9I	GATC	7 cut(s)	84, 310, 349, 493, 739, 1064, 1741
LguI	GCTCTTC	1 cut(s)	423
LmnI	GCTCC	3 cut(s)	29, 385, 1786
Lsp1109I	GCAGC	4 cut(s)	116, 615, 982, 1588
LweI	GCATC	4 cut(s)	172, 248, 453, 1000
MaeI	CTAG	2 cut(s)	1833, 1884
MaeII	ACGT	3 cut(s)	759, 1651, 1660
MaeIII	GTNAC	3 cut(s)	1339, 1714, 1827
MalI	GATC	7 cut(s)	86, 312, 351, 495, 741, 1066, 1743
MboI	GATC	7 cut(s)	84, 310, 349, 493, 739, 1064, 1741
MfeI	CAATTG	2 cut(s)	528, 1484
MflI	RGATCY	3 cut(s)	84, 493, 1064
MhlI	GDGCHC	7 cut(s)	37, 469, 551, 732, 1532, 1674, 1791
MlsI	TGGCCA	3 cut(s)	41, 246, 654
MluNI	TGGCCA	3 cut(s)	41, 246, 654
Mly113I	GGCGCC	2 cut(s)	93, 1517
MlyI	GAGTC	2 cut(s)	708, 1265
Mox20I	TGGCCA	3 cut(s)	41, 246, 654
Mph1103I	ATGCAT	1 cut(s)	446
MroXI	GAANNNNTTC	1 cut(s)	1850
MscI	TGGCCA	3 cut(s)	41, 246, 654
MseI	TTAA	6 cut(s)	276, 839, 1326, 1356, 1503, 1524
MslI	CAYNNNNRTG	1 cut(s)	587
Msp20I	TGGCCA	3 cut(s)	41, 246, 654
MspA1I	CMGCKG	1 cut(s)	425
MspI	CCGG	3 cut(s)	304, 540, 821
MspR9I	CCNGG	4 cut(s)	126, 305, 656, 822
MunI	CAATTG	2 cut(s)	528, 1484
Mva1269I	GAATGC	2 cut(s)	862, 1444
MvaI	CCWGG	2 cut(s)	126, 656
MvnI	CGCG	2 cut(s)	705, 719
MwoI	GCNNNNNNNGC	3 cut(s)	126, 992, 1226
NarI	GGCGCC	2 cut(s)	93, 1517
NciI	CCSGG	2 cut(s)	305, 822
NdeI	CATATG	1 cut(s)	1072
NdeII	GATC	7 cut(s)	84, 310, 349, 493, 739, 1064, 1741
NlaIII	CATG	7 cut(s)	182, 193, 251, 274, 444, 1118, 1319
NlaIV	GGNNCC	4 cut(s)	94, 1518, 1553, 1636
NmeAIII	GCCGAG	1 cut(s)	1288
NmuCI	GTSAC	3 cut(s)	1339, 1714, 1827
NsiI	ATGCAT	1 cut(s)	446
NspI	RCATGY	3 cut(s)	193, 444, 1319
NspV	TTCGAA	1 cut(s)	664
PaeI	GCATGC	1 cut(s)	444
PagI	TCATGA	1 cut(s)	178
PceI	AGGCCT	1 cut(s)	690
PciI	ACATGT	2 cut(s)	189, 1315
PciSI	GCTCTTC	1 cut(s)	423
PcsI	WCGNNNNNNNCGW	1 cut(s)	1657
PctI	GAATGC	2 cut(s)	862, 1444
PdmI	GAANNNNTTC	1 cut(s)	1850
PfeI	GAWTC	3 cut(s)	1546, 1700, 1851
PkrI	GCNGC	4 cut(s)	131, 630, 997, 1603
PleI	GAGTC	2 cut(s)	707, 1265
PluTI	GGCGCC	2 cut(s)	96, 1520
PpsI	GAGTC	2 cut(s)	707, 1265
Ppu21I	YACGTR	1 cut(s)	1661
PscI	ACATGT	2 cut(s)	189, 1315
PshBI	ATTAAT	1 cut(s)	839
Psp124BI	GAGCTC	2 cut(s)	1674, 1791
Psp1406I	AACGTT	1 cut(s)	1651
Psp6I	CCWGG	2 cut(s)	124, 654
PspEI	GGTNACC	1 cut(s)	1827
PspFI	CCCAGC	2 cut(s)	433, 1005
PspGI	CCWGG	2 cut(s)	124, 654
PspN4I	GGNNCC	4 cut(s)	94, 1518, 1553, 1636
PspPI	GGNCC	4 cut(s)	355, 533, 823, 1181
PstNI	CAGNNNCTG	3 cut(s)	227, 572, 1775
PsuI	RGATCY	3 cut(s)	84, 493, 1064
PvuII	CAGCTG	1 cut(s)	425
RsaI	GTAC	3 cut(s)	1636, 1663, 1680
RsaNI	GTAC	3 cut(s)	1635, 1662, 1679
RseI	CAYNNNNRTG	1 cut(s)	587
SacI	GAGCTC	2 cut(s)	1674, 1791
SalI	GTCGAC	1 cut(s)	776
SapI	GCTCTTC	1 cut(s)	423
SaqAI	TTAA	6 cut(s)	276, 839, 1326, 1356, 1503, 1524
SatI	GCNGC	4 cut(s)	130, 629, 996, 1602
Sau3AI	GATC	7 cut(s)	84, 310, 349, 493, 739, 1064, 1741
Sau96I	GGNCC	4 cut(s)	355, 533, 823, 1181
SchI	GAGTC	2 cut(s)	708, 1265
ScrFI	CCNGG	4 cut(s)	126, 305, 656, 822
SduI	GDGCHC	7 cut(s)	37, 469, 551, 732, 1532, 1674, 1791
SfaNI	GCATC	4 cut(s)	172, 248, 453, 1000
SfcI	CTRYAG	1 cut(s)	1629
SfoI	GGCGCC	2 cut(s)	94, 1518
SfuI	TTCGAA	1 cut(s)	664
SinI	GGWCC	2 cut(s)	355, 533
SmiMI	CAYNNNNRTG	1 cut(s)	587
SmlI	CTYRAG	4 cut(s)	137, 320, 645, 1106
SmoI	CTYRAG	4 cut(s)	137, 320, 645, 1106
SphI	GCATGC	1 cut(s)	444
SseBI	AGGCCT	1 cut(s)	690
SsiI	CCGC	3 cut(s)	28, 703, 719
SspDI	GGCGCC	2 cut(s)	92, 1516
SspMI	CTAG	2 cut(s)	1833, 1884
SstI	GAGCTC	2 cut(s)	1674, 1791
StuI	AGGCCT	1 cut(s)	690
StyD4I	CCNGG	4 cut(s)	124, 303, 654, 820
StyI	CCWWGG	4 cut(s)	685, 803, 1275, 1575
TaaI	ACNGT	7 cut(s)	359, 775, 950, 1534, 1560, 1696, 1842
TaiI	ACGT	3 cut(s)	762, 1654, 1663
TaqI	TCGA	8 cut(s)	545, 664, 777, 1191, 1398, 1640, 1723, 1802
TaqII	GACCGA	1 cut(s)	1702
TfiI	GAWTC	3 cut(s)	1546, 1700, 1851
Tru1I	TTAA	6 cut(s)	276, 839, 1326, 1356, 1503, 1524
Tru9I	TTAA	6 cut(s)	276, 839, 1326, 1356, 1503, 1524
TscAI	CASTG	5 cut(s)	37, 268, 556, 864, 1798
TseFI	GTSAC	3 cut(s)	1339, 1714, 1827
TseI	GCWGC	4 cut(s)	129, 628, 995, 1601
Tsp45I	GTSAC	3 cut(s)	1339, 1714, 1827
TspGWI	ACGGA	2 cut(s)	525, 1739
TspRI	CASTG	5 cut(s)	37, 268, 556, 864, 1798
VneI	GTGCAC	1 cut(s)	1528
VpaK11BI	GGWCC	2 cut(s)	355, 533
VspI	ATTAAT	1 cut(s)	839
XapI	RAATTY	4 cut(s)	592, 764, 1245, 1379
XbaI	TCTAGA	1 cut(s)	1883
XceI	RCATGY	3 cut(s)	193, 444, 1319
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1282
XmiI	GTMKAC	1 cut(s)	777
XmnI	GAANNNNTTC	1 cut(s)	1850
XspI	CTAG	2 cut(s)	1833, 1884
Zsp2I	ATGCAT	1 cut(s)	446

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.