Rorug04G0229700

Glycine--tRNA ligase 1

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000004
Physical Location & Seq
Reverse (-)
39376649 .. 39382177
5529 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug04G0229700.1

Sequence Viewer

Length: 4386 bp
ATGTCCTCTCTCCTTAGTTCCGCTGCCGGAGGAGCCGTGAGTAAGGTGGCCTCACTTGCTACTGAACAGTTGAAACTCGAAATCGTCTGCTGTTTCCACAAGGAACTGAAAAAGCTCGAAGAATCCTCAACTAAGATTAGAAATATAATCCATGATGTTGCGCACGGACCCGAAGATCCGGAACTGTGGTCAAGGGCCGATTGGATGAAGAGGCTTATAGGCGTAGCTCATGATGCAGAAGATATCTTGGGTGAAGTTCAATATGAAGTAGATCGGATCAAAATAGAGGAGACAAGCCTGGATAAGAAGATACTCGGCTTCTTCTGCAGCAATCCTCTTGTATTTCGTCTTCAGATGGCACGCAAGATTCACAACATCACCACATCCTTGGATGATCTCTACAAGGAAGCAGCCGCTGTTGTAGCCGCCATGCCAAGCAGATCAAATGGAGTTGCAGCAGCCAGTCAAGATATGCGGGAGACAACCTCATTCCCTGAGAAAAACGAACTCACCGGGAAAGATGCAATCATTATCGGAAGGGATGGGTATGTGTCCGATATAATTGCAAAGCTGACCAACTCCAACAATCAAGAAAAGATTCTTTCGGTGATGGCCATTGTGGGATTGGGAGGCCTAGGTAAAACAACTTTGGCCCAATTAGTTACCAAGCAACTGAAAGAAGGTGAAATGAAAAAGTACTTTGATTCAACATTCTGGGTCTACACATCTAGAACTCTTGATATCAATAAAATTTTACAACATATGGTGCACTCATGTGACCAGACGTCAGCAAACCTTTCAACTCGGGACTTATTGATTGAAAGCCTCCGCAACAAGTTGACAGAGAAAAGGGTTTTCCTGGTACTTGATGATGTGTGGGATGAACACAGAGAAAATTGGGTTCGTTTGAGGGATTGTCTGCTGCTACTAAATTTTGCCAAAGGAAGCACTGTGATTGTGACCACTCGCCTCACCGGAGTAGCATCAATTATGGAAGCAATTATGGAACCACTTCCTAGGTGGGATCTAAACCCTTTATCGGATGATGAATGTTGGTCCATATTGAAGGATAGAGCATTTGCAGTTCCTACTGCTCCGATAGCTTTAGAACAAGAGAGTATCGGAAGGGACCTTGCCAAAAAGTGTGCTGGTCTTCCATTGGCGGCAAAGGTTTTGGGAAGCTTGATGCGTAGCAACGAATGGTCGTCAATTCTGAAAAGTAAAATATGGTTGTTATCATCAGACAGAGAGGATAACAGGATCATGCCGGTTCTAAGGTTGAGTTTTGACAATTTGAAATCACCATTGAAACAATGTTTTGCATATTGCTCCATGCTTGAGAGAGGTTCCTCAATTAAAAAAGGTAACTTGATCCAACTATGGATGGCTCAAGGTTTTCTCGATCCTTCTCATGATCACCAAAGCAATCAAGAGATTGAAATGGAGGATATAGGCAGCAATTATTTTGATACTCTACTGGAGAACTCCTTGTTTCAAGATGCTACAAAGGATAAGGGTGGCGTTATCACCGAATGCAAGATGCACGATCTTCTGCATGATCTTGCAATAGAAGTATCCAAGTTTGAGAGTTGGACACCAGACTTCAATAATAGGATGGATGGTCGTGATGTTCGACATGTTGCACGGCTTCATACTTCAAACCTAAGTATGCCAGAAACAAATTTTTCAAGACTGTGCTCACTCTTTTCAAATGTCCAGGTCCTTAATATGATTTTACCAACTTTAAGAGCTTTACGTGTCTTAATTTTCTGTCAGGCAGAGAACCAAGAGTTGCTAAATTCACTTGGCAAGTTGAAGCACTTGAGGTATCTAGATCTTTCCTGTACAGACATTGAAGCACTCCCAAAGTCTATTGGCAAGCTCTATAACCTCCAAACATTGAGATTACCGTGGATCAGACAGTGTCCAAAGGAAATTCAAAATTTGATCAACTTGAGGCATTTTTATTTTGGTGAGGGGATGAAATTTGAGGCTGGGGTTTTGGAGCGATTAACTAATCTCCAAACATTGCCTTTCTTTAATGTGGGTGAGGAGAGAGGTCCTGCAATTAAGGAGTTGGGTAGGTTGAAACAACTGAGAGGCCACTTAATTATTGATGGGCTACAACTTGTAAGGGATAGAGAAGAAGCAAAGAAGGCTTTCTTAGTGGAGAAAAGTCACTTAAGTGAGTTGACTTTTCGATGGCCGTTCAGACCCTTCACGTTTTTCAGGCCAGCTAACGACAATGAGACGGAGGTACTAGATGGCTTGGAACCTCATGGTAACTTGCAAAGCTTGAACATTAAGAATTTCATGGGTACTAGATTTCCGTCATGGATAACGAGTCACCAAAATTTAAAGCAGATTCGATTAGAGCACTGCGAAAATTGTGAAGGAGTCCCAACTCTCGGCCACCTGCCTAATCTAAGATCTCTTAAGATTGAATGGATGGAAAAGCTGAAACGTGTACAACTTTATGGTTATAGTGATACTAGCACAACTTTATTTCCAGCTCTGAAAACACTATCCATCTCTTGGTGCGATGAGCTCATTGAATGGATGGAAGCACCGAGGATATCAGCTGAAGGAGAGGTCGTGAAGGTATTTCCTTGTCTCGAACGGTTGAGGATATATGGTTGTCCCAGCCTAGAGTCGATTCGGATCACACAGGGCATCGCATCTCTCCGTCAATTGAACATCTGGGTCTGTCATGCATTATCAAGCCTAGAGGTTGGGCTCGATTACTGCACCTCTCTTCAGGAGTTGCATATAAGGCTTTGCCGTAATCTGGTTTCAATTCCAACCGCACAGGGCATGCCGTCTCTCCGGAAATTGAATCTCGTATGGTGTGATGGATTGTCAAGCCTAGGAAGTGGGCTCAACTACTGCACCTCTCTTCAGAAATTGGAGATATTGCATTGTTATAATCTAACATCAATTCCAATCACACAGGGCATCACATCTCTCCAGAGCTTGAGGATTGTTCAATGTCGGAGCTTAGTAAGCCTACCGAGTGGGCTCCAATTCTGCACCTCTCTTGAGGATCTGGCGATAACTGATTGCTCTAGTCTAGTATCCATGTCAGTATCATATGTGAAGTGCGACCACCCAGAATCAACGAATCAACCGGAGGAAGTCTTTACAGGTGTTGTTGAGTCTTCATCCATCCAGGTGTTGTTGAAATCTATTCTAGACTCACCGAATCGACCGAGGAAAGTCTATACAGGGCTTGTTGAGTATTTGTCTATACAGGAGGATTGCCCTAGTCTAGAATCTATTCCACCTAATCTCCGTCACTTGTTGATATGTCATTGTGGGAAATTCAAATTGGTGCCCACAGGAGGATTTCACCGCCTCACTCGTTTGAAGAAGCTAACAATTGGTGCATTCTGGGAGGAGATGGACGCCTTCCCTGATTTTCAGCTTCCACCACTACTTGAATGCTTAGAGTTGGTGCGGTGGCCCAAGCTCAAGTCTCTGCCCCAACAAATTCAGCACTTGACTTGTTTAAAAGAACTCTTGATAAAAGATTTTACAACTCTTGAGGCTCTTCCTGAGTGGTTGGGAAATCTTACATCTCTTGAACTTCTCGAGATCTCGTTCTGTAAGAATCTCAAGTATCTGCCTACTCTAAATGCTATGAAAAGCCTCACCAAATTGAAGCAGCTCTCCGGTTGGGGATGTCCCCTGCTCAAGGAAAGATGCACCGAGGAGACTGGCCCAGAATGGCCCAAGATTTCTCACATCCCAGCCGCTCTATCATCTTTAATGGGAAGATCAGAAGATGCTGAGTGGGAATTGGAGATTGGGCATTGTGATAATCTAACATCAATTCCAATCACACAGGGCATCACATCTCTCCGGAGCTTGAAGATTTCTTATTGTAAGAGATTATTAAGCCTACCGAGTGGGCTCCAATTCTGCACCTCTCTTCAGGATCTGCAAATAACTAATTGCTTTAGTCTAGTATCCATGTCAGTATCATATGTGTGCGACCACCCGGACTCAACGAATCAACCGGAGGAAATCTCTACAGGTGTTGATGCGTATTTGTCTTTACAGGAGGAGGATTGCCCTGGTCTAGAATCTATTCCACCTAATCTCCGTCACTTGTTGATATGTCATTGTGGGAAATTCAAATCACAAGTGCCCACAGGATTTCACCGCCTCACTTGTTTGAAGACGCTGACAATTGGTGCTTTCTGGGAGGAGCTGGACGCCTTCCCTGATTTTCAGCTTCCTCCACCACATGATTCACAACTTGAAGAGTTAATGTTGAAGGGGTGGCCTAAGCTCAAGTCTCTGCCCCAACAAATTCAGCACTTGACTTGTTTAAAAGAACTCTGGATAAGTTCTTTTGAGGGACTAGAGGCTCTTCCTGAGTAG

Protein Analysis

1461

Amino Acids

165.16

Weight (kDa)

6.07

Isoelectric Point (pI)

48.16

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Rx_N PF18052 12 - 94 5.5e-08 Rx N-terminal domain
NB-ARC PF00931 183 - 361 3.4e-30 NB-ARC domain
NACHT PF05729 203 - 349 5e-07 NACHT domain
WHD_DRP PF23559 448 - 522 6.8e-21 Disease resistance protein Winged helix domain
LRR_14 PF23598 569 - 927 1e-35 Leucine-rich repeat region
LRR_R13L1-DRL21 PF25019 690 - 817 1.1e-35 R13L1/DRL21 LRRs
LRR_14 PF23598 1146 - 1224 5e-07 Leucine-rich repeat region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2925
AarI CACCTGC 1 cut(s) 2424
AatII GACGTC 1 cut(s) 788
Acc16I TGCGCA 1 cut(s) 162
Acc36I ACCTGC 1 cut(s) 2424
AccB1I GGYRCC 1 cut(s) 3331
AccB7I CCANNNNNTGG 1 cut(s) 2535
AccBSI CCGCTC 1 cut(s) 3755
AccI GTMKAC 1 cut(s) 720
AccIII TCCGGA 3 cut(s) 178, 2826, 3861
AcoI YGGCCR 3 cut(s) 612, 2204, 2410
AcuI CTGAAG 5 cut(s) 335, 2604, 2741, 2882, 3917
AcyI GRCGYC 3 cut(s) 785, 3405, 4218
AfaI GTAC 6 cut(s) 698, 864, 1846, 2259, 2320, 2469
AfiI CCNNNNNNNGG 6 cut(s) 1039, 2408, 2535, 2788, 3341, 3694
AflII CTTAAG 2 cut(s) 2182, 2435
AflIII ACRYGT 3 cut(s) 1636, 1756, 2464
AhdI GACNNNNNGTC 1 cut(s) 784
AjnI CCWGG 5 cut(s) 297, 858, 1716, 3168, 4075
AjuI GAANNNNNNNTTGG 4 cut(s) 3311, 3343, 3789, 3821
AleI CACNNNNGTG 2 cut(s) 774, 2184
Alw21I GWGCWC 4 cut(s) 771, 1700, 2379, 2550
Alw26I GTCTC 8 cut(s) 284, 473, 2243, 2618, 2826, 3480, 3707, 4305
Alw44I GTGCAC 1 cut(s) 767
AlwNI CAGNNNCTG 2 cut(s) 416, 3940
Ama87I CYCGRG 2 cut(s) 804, 3590
Aor13HI TCCGGA 3 cut(s) 178, 2826, 3861
ApaLI GTGCAC 1 cut(s) 767
ApeKI GCWGC 8 cut(s) 23, 327, 410, 455, 458, 922, 1455, 3664
Asp700I GAANNNNTTC 5 cut(s) 597, 1011, 2159, 3276, 4089
AspA2I CCTAGG 3 cut(s) 634, 1016, 2866
AspLEI GCGC 1 cut(s) 163
AsuC2I CCSGG 2 cut(s) 514, 4001
AvaI CYCGRG 2 cut(s) 804, 3590
AvaII GGWCC 5 cut(s) 167, 1056, 1129, 1720, 2060
AvrII CCTAGG 3 cut(s) 634, 1016, 2866
BaeGI GKGCMC 3 cut(s) 771, 3336, 4152
BalI TGGCCA 1 cut(s) 614
BanI GGYRCC 1 cut(s) 3331
BanII GRGCYC 5 cut(s) 2550, 2739, 2880, 3021, 3915
BarI GAAGNNNNNNTAC 2 cut(s) 333, 365
BbsI GAAGAC 4 cut(s) 341, 1145, 3150, 4187
Bbv12I GWGCWC 4 cut(s) 771, 1700, 2379, 2550
BbvI GCAGC 8 cut(s) 10, 339, 422, 467, 470, 909, 1467, 3676
BceAI ACGGC 5 cut(s) 20, 1661, 2191, 2766, 2803
BcgI CGANNNNNNTGC 2 cut(s) 545, 579
BciT130I CCWGG 5 cut(s) 299, 860, 1718, 3170, 4077
BciVI GTATCC 3 cut(s) 1585, 3085, 3979
BclI TGATCA 2 cut(s) 1414, 1947
BcnI CCSGG 2 cut(s) 514, 4001
BcoDI GTCTC 8 cut(s) 284, 473, 2243, 2618, 2826, 3480, 3707, 4305
BfmI CTRYAG 2 cut(s) 325, 4032
BfrI CTTAAG 2 cut(s) 2182, 2435
BfuAI ACCTGC 1 cut(s) 2424
BfuI GTATCC 3 cut(s) 1585, 3085, 3979
BglII AGATCT 3 cut(s) 1834, 2429, 3594
BlnI CCTAGG 3 cut(s) 634, 1016, 2866
BmcAI AGTACT 1 cut(s) 698
Bme1390I CCNGG 7 cut(s) 299, 514, 860, 1718, 3170, 4001, 4077
Bme18I GGWCC 5 cut(s) 167, 1056, 1129, 1720, 2060
BmeRI GACNNNNNGTC 1 cut(s) 784
BmeT110I CYCGRG 2 cut(s) 804, 3590
BmiI GGNNCC 9 cut(s) 34, 169, 1008, 1130, 1348, 2274, 3020, 3333, 3914
BmrFI CCNGG 7 cut(s) 299, 514, 860, 1718, 3170, 4001, 4077
BpiI GAAGAC 4 cut(s) 341, 1145, 3150, 4187
BplI GAGNNNNNCTC 4 cut(s) 470, 502, 4013, 4045
BpmI CTGGAG 2 cut(s) 1499, 2951
Bpu10I CCTNAGC 1 cut(s) 4290
BpuMI CCSGG 2 cut(s) 514, 4001
BsaAI YACGTR 1 cut(s) 1757
BsaBI GATNNNNATC 1 cut(s) 2660
BsaHI GRCGYC 3 cut(s) 785, 3405, 4218
BsaJI CCNNGG 9 cut(s) 387, 634, 1016, 1910, 2570, 2866, 3209, 3708, 4075
BsaWI WCCGGW 7 cut(s) 178, 974, 2826, 3127, 3671, 3861, 4018
BsaXI ACNNNNNCTCC 8 cut(s) 21, 51, 2580, 2610, 3273, 3303, 4086, 4116
Bsc4I CCNNNNNNNGG 6 cut(s) 1039, 2408, 2535, 2788, 3341, 3694
Bse118I RCCGGY 1 cut(s) 1267
Bse1I ACTGG 3 cut(s) 462, 1482, 3721
Bse3DI GCAATG 1 cut(s) 2027
Bse8I GATNNNNATC 1 cut(s) 2660
BseAI TCCGGA 3 cut(s) 178, 2826, 3861
BseBI CCWGG 5 cut(s) 299, 860, 1718, 3170, 4077
BseDI CCNNGG 9 cut(s) 387, 634, 1016, 1910, 2570, 2866, 3209, 3708, 4075
BseJI GATNNNNATC 1 cut(s) 2660
BseLI CCNNNNNNNGG 6 cut(s) 1039, 2408, 2535, 2788, 3341, 3694
BseMI GCAATG 1 cut(s) 2027
BseMII CTCAG 5 cut(s) 486, 2087, 3546, 3780, 4371
BseNI ACTGG 3 cut(s) 462, 1482, 3721
BseRI GAGGAG 7 cut(s) 45, 302, 2066, 3410, 3725, 4079, 4223
BseSI GKGCMC 3 cut(s) 771, 3336, 4152
BseXI GCAGC 8 cut(s) 10, 339, 422, 467, 470, 909, 1467, 3676
BseYI CCCAGC 3 cut(s) 1994, 2642, 3748
BsgI GTGCAG 4 cut(s) 2731, 2872, 3013, 3907
Bsh1285I CGRYCG 1 cut(s) 3209
BshNI GGYRCC 1 cut(s) 3331
BsiEI CGRYCG 1 cut(s) 3209
BsiHKAI GWGCWC 4 cut(s) 771, 1700, 2379, 2550
BsiHKCI CYCGRG 2 cut(s) 804, 3590
BslFI GGGAC 6 cut(s) 821, 1142, 2384, 2625, 3669, 4377
BslI CCNNNNNNNGG 6 cut(s) 1039, 2408, 2535, 2788, 3341, 3694
BsmAI GTCTC 8 cut(s) 284, 473, 2243, 2618, 2826, 3480, 3707, 4305
BsmBI CGTCTC 2 cut(s) 2243, 2826
BsmFI GGGAC 6 cut(s) 821, 1142, 2384, 2625, 3669, 4377
BsmI GAATGC 3 cut(s) 1538, 3386, 3446
BsoBI CYCGRG 2 cut(s) 804, 3590
Bsp13I TCCGGA 3 cut(s) 178, 2826, 3861
Bsp1407I TGTACA 2 cut(s) 1844, 2467
BspCNI CTCAG 5 cut(s) 487, 2088, 3547, 3781, 4372
BspEI TCCGGA 3 cut(s) 178, 2826, 3861
BspHI TCATGA 2 cut(s) 229, 1411
BspLI GGNNCC 9 cut(s) 34, 169, 1008, 1130, 1348, 2274, 3020, 3333, 3914
BspMAI CTGCAG 1 cut(s) 329
BspMI ACCTGC 1 cut(s) 2424
BspQI GCTCTTC 2 cut(s) 3555, 4380
BspT107I GGYRCC 1 cut(s) 3331
BspTI CTTAAG 2 cut(s) 2182, 2435
BsrBI CCGCTC 1 cut(s) 3755
BsrDI GCAATG 1 cut(s) 2027
BsrFI RCCGGY 1 cut(s) 1267
BsrGI TGTACA 2 cut(s) 1844, 2467
BsrI ACTGG 3 cut(s) 462, 1482, 3721
BssAI RCCGGY 1 cut(s) 1267
BssECI CCNNGG 9 cut(s) 387, 634, 1016, 1910, 2570, 2866, 3209, 3708, 4075
BssNI GRCGYC 3 cut(s) 785, 3405, 4218
BssT1I CCWWGG 4 cut(s) 387, 634, 1016, 2866
Bst2UI CCWGG 5 cut(s) 299, 860, 1718, 3170, 4077
Bst4CI ACNGT 7 cut(s) 69, 186, 952, 1695, 1911, 1923, 2622
Bst6I CTCTTC 7 cut(s) 203, 2760, 2901, 3555, 3936, 4260, 4380
BstACI GRCGYC 3 cut(s) 785, 3405, 4218
BstAFI CTTAAG 2 cut(s) 2182, 2435
BstAUI TGTACA 2 cut(s) 1844, 2467
BstBAI YACGTR 1 cut(s) 1757
BstC8I GCNNGC 4 cut(s) 361, 1880, 2235, 2816
BstDSI CCRYGG 1 cut(s) 1910
BstENI CCTNNNNNAGG 1 cut(s) 3692
BstHHI GCGC 1 cut(s) 163
BstMAI GTCTC 8 cut(s) 284, 473, 2243, 2618, 2826, 3480, 3707, 4305
BstMCI CGRYCG 1 cut(s) 3209
BstMWI GCNNNNNNNGC 9 cut(s) 32, 56, 233, 324, 422, 1100, 2156, 2773, 3003
BstNI CCWGG 5 cut(s) 299, 860, 1718, 3170, 4077
BstNSI RCATGY 2 cut(s) 1640, 2818
BstSCI CCNGG 7 cut(s) 297, 512, 858, 1716, 3168, 3999, 4075
BstSFI CTRYAG 2 cut(s) 325, 4032
BstSLI GKGCMC 3 cut(s) 771, 3336, 4152
BstV1I GCAGC 8 cut(s) 10, 339, 422, 467, 470, 909, 1467, 3676
BstV2I GAAGAC 4 cut(s) 341, 1145, 3150, 4187
BstX2I RGATCY 7 cut(s) 175, 1024, 1834, 2429, 3043, 3594, 3937
BstXI CCANNNNNNTGG 1 cut(s) 388
BstYI RGATCY 7 cut(s) 175, 1024, 1834, 2429, 3043, 3594, 3937
BsuI GTATCC 3 cut(s) 1585, 3085, 3979
BtgI CCRYGG 1 cut(s) 1910
BtgZI GCGATG 2 cut(s) 2556, 2659
BtsI GCAGTG 1 cut(s) 2377
BtsIMutI CAGTG 3 cut(s) 948, 1928, 2377
BveI ACCTGC 1 cut(s) 2424
Cac8I GCNNGC 4 cut(s) 361, 1880, 2235, 2816
CaiI CAGNNNCTG 2 cut(s) 416, 3940
CciI TCATGA 2 cut(s) 229, 1411
CfoI GCGC 1 cut(s) 163
Cfr10I RCCGGY 1 cut(s) 1267
CseI GACGC 3 cut(s) 3413, 4192, 4226
Csp6I GTAC 6 cut(s) 697, 863, 1845, 2258, 2319, 2468
CviQI GTAC 6 cut(s) 697, 863, 1845, 2258, 2319, 2468
DraI TTTAAA 3 cut(s) 2358, 3510, 4335
DriI GACNNNNNGTC 1 cut(s) 784
EaeI YGGCCR 3 cut(s) 612, 2204, 2410
Eam1104I CTCTTC 7 cut(s) 203, 2760, 2901, 3555, 3936, 4260, 4380
Eam1105I GACNNNNNGTC 1 cut(s) 784
EarI CTCTTC 7 cut(s) 203, 2760, 2901, 3555, 3936, 4260, 4380
Ecl136II GAGCTC 1 cut(s) 2548
Eco130I CCWWGG 4 cut(s) 387, 634, 1016, 2866
Eco147I AGGCCT 1 cut(s) 633
Eco24I GRGCYC 5 cut(s) 2550, 2739, 2880, 3021, 3915
Eco32I GATATC 3 cut(s) 244, 742, 2577
Eco47I GGWCC 5 cut(s) 167, 1056, 1129, 1720, 2060
Eco53kI GAGCTC 1 cut(s) 2548
Eco57I CTGAAG 5 cut(s) 335, 2604, 2741, 2882, 3917
Eco88I CYCGRG 2 cut(s) 804, 3590
EcoICRI GAGCTC 1 cut(s) 2548
EcoNI CCTNNNNNAGG 1 cut(s) 3692
EcoO109I RGGNCCY 3 cut(s) 1129, 1720, 2060
EcoRII CCWGG 5 cut(s) 297, 858, 1716, 3168, 4075
EcoRV GATATC 3 cut(s) 244, 742, 2577
EcoT14I CCWWGG 4 cut(s) 387, 634, 1016, 2866
EcoT22I ATGCAT 1 cut(s) 2716
EcoT38I GRGCYC 5 cut(s) 2550, 2739, 2880, 3021, 3915
ErhI CCWWGG 4 cut(s) 387, 634, 1016, 2866
Esp3I CGTCTC 2 cut(s) 2243, 2826
FalI AAGNNNNNCTT 2 cut(s) 2147, 2179
FaqI GGGAC 6 cut(s) 821, 1142, 2384, 2625, 3669, 4377
FauI CCCGC 1 cut(s) 468
FauNDI CATATG 3 cut(s) 762, 3091, 3985
FbaI TGATCA 2 cut(s) 1414, 1947
FblI GTMKAC 1 cut(s) 720
FriOI GRGCYC 5 cut(s) 2550, 2739, 2880, 3021, 3915
FspI TGCGCA 1 cut(s) 162
GlaI GCGC 1 cut(s) 162
GsaI CCCAGC 3 cut(s) 1998, 2646, 3752
GsuI CTGGAG 2 cut(s) 1499, 2951
HgaI GACGC 3 cut(s) 3413, 4192, 4226
HhaI GCGC 1 cut(s) 163
Hin1I GRCGYC 3 cut(s) 785, 3405, 4218
Hin6I GCGC 1 cut(s) 161
HinP1I GCGC 1 cut(s) 161
HincII GTYRAC 2 cut(s) 840, 2193
HindII GTYRAC 2 cut(s) 840, 2193
HindIII AAGCTT 2 cut(s) 1180, 2293
Hpy166II GTNNAC 5 cut(s) 721, 769, 840, 2193, 2468
Hpy8I GTNNAC 5 cut(s) 721, 769, 840, 2193, 2468
HpyCH4III ACNGT 7 cut(s) 69, 186, 952, 1695, 1911, 1923, 2622
HpyCH4IV ACGT 4 cut(s) 785, 1756, 2222, 2464
HpyF10VI GCNNNNNNNGC 9 cut(s) 32, 56, 233, 324, 422, 1100, 2156, 2773, 3003
HpySE526I ACGT 4 cut(s) 785, 1756, 2222, 2464
Hsp92I GRCGYC 3 cut(s) 785, 3405, 4218
HspAI GCGC 1 cut(s) 161
Kpn2I TCCGGA 3 cut(s) 178, 2826, 3861
Ksp22I TGATCA 2 cut(s) 1414, 1947
LguI GCTCTTC 2 cut(s) 3555, 4380
LmnI GCTCC 9 cut(s) 32, 1099, 1334, 2005, 2994, 3024, 3864, 3918, 4210
Lsp1109I GCAGC 8 cut(s) 10, 339, 422, 467, 470, 909, 1467, 3676
MaeII ACGT 4 cut(s) 785, 1756, 2222, 2464
MaeIII GTNAC 9 cut(s) 661, 776, 958, 1364, 2177, 2282, 2345, 3293, 4106
MbiI CCGCTC 1 cut(s) 3755
MfeI CAATTG 3 cut(s) 2690, 3378, 4191
MflI RGATCY 7 cut(s) 175, 1024, 1834, 2429, 3043, 3594, 3937
MlsI TGGCCA 1 cut(s) 614
MluNI TGGCCA 1 cut(s) 614
MlyI GAGTC 6 cut(s) 2353, 2406, 2660, 3164, 3188, 3998
MmeI TCCRAC 5 cut(s) 606, 1399, 1571, 2825, 2972
Mox20I TGGCCA 1 cut(s) 614
Mph1103I ATGCAT 1 cut(s) 2716
MroI TCCGGA 3 cut(s) 178, 2826, 3861
MroXI GAANNNNTTC 5 cut(s) 597, 1011, 2159, 3276, 4089
MscI TGGCCA 1 cut(s) 614
MslI CAYNNNNRTG 4 cut(s) 774, 2184, 3170, 3988
Msp20I TGGCCA 1 cut(s) 614
MspA1I CMGCKG 3 cut(s) 23, 416, 2582
MspCI CTTAAG 2 cut(s) 2182, 2435
MspR9I CCNGG 7 cut(s) 299, 514, 860, 1718, 3170, 4001, 4077
MunI CAATTG 3 cut(s) 2690, 3378, 4191
Mva1269I GAATGC 3 cut(s) 1538, 3386, 3446
MvaI CCWGG 5 cut(s) 299, 860, 1718, 3170, 4077
MwoI GCNNNNNNNGC 9 cut(s) 32, 56, 233, 324, 422, 1100, 2156, 2773, 3003
NciI CCSGG 2 cut(s) 514, 4001
NdeI CATATG 3 cut(s) 762, 3091, 3985
NlaIV GGNNCC 9 cut(s) 34, 169, 1008, 1130, 1348, 2274, 3020, 3333, 3914
NmeAIII GCCGAG 2 cut(s) 294, 2388
NmuCI GTSAC 6 cut(s) 776, 958, 2177, 2345, 3293, 4106
NsbI TGCGCA 1 cut(s) 162
NsiI ATGCAT 1 cut(s) 2716
NspI RCATGY 2 cut(s) 1640, 2818
OliI CACNNNNGTG 2 cut(s) 774, 2184
PaeI GCATGC 1 cut(s) 2818
PaeR7I CTCGAG 1 cut(s) 3590
PagI TCATGA 2 cut(s) 229, 1411
PaqCI CACCTGC 1 cut(s) 2424
PceI AGGCCT 1 cut(s) 633
PciI ACATGT 1 cut(s) 1636
PciSI GCTCTTC 2 cut(s) 3555, 4380
PcsI WCGNNNNNNNCGW 1 cut(s) 1630
PctI GAATGC 3 cut(s) 1538, 3386, 3446
PdmI GAANNNNTTC 5 cut(s) 597, 1011, 2159, 3276, 4089
PflFI GACNNNGTC 1 cut(s) 1923
PflMI CCANNNNNTGG 1 cut(s) 2535
PleI GAGTC 6 cut(s) 2352, 2405, 2659, 3163, 3188, 3998
PpsI GAGTC 6 cut(s) 2352, 2405, 2659, 3163, 3188, 3998
Ppu21I YACGTR 1 cut(s) 1757
PpuMI RGGWCCY 3 cut(s) 1129, 1720, 2060
PscI ACATGT 1 cut(s) 1636
PsiI TTATAA 1 cut(s) 2925
Psp124BI GAGCTC 1 cut(s) 2550
Psp5II RGGWCCY 3 cut(s) 1129, 1720, 2060
Psp6I CCWGG 5 cut(s) 297, 858, 1716, 3168, 4075
PspFI CCCAGC 3 cut(s) 1994, 2642, 3748
PspGI CCWGG 5 cut(s) 297, 858, 1716, 3168, 4075
PspN4I GGNNCC 9 cut(s) 34, 169, 1008, 1130, 1348, 2274, 3020, 3333, 3914
PspPPI RGGWCCY 3 cut(s) 1129, 1720, 2060
PstI CTGCAG 1 cut(s) 329
PstNI CAGNNNCTG 2 cut(s) 416, 3940
PsuI RGATCY 7 cut(s) 175, 1024, 1834, 2429, 3043, 3594, 3937
PsyI GACNNNGTC 1 cut(s) 1923
PvuII CAGCTG 1 cut(s) 2582
RsaI GTAC 6 cut(s) 698, 864, 1846, 2259, 2320, 2469
RsaNI GTAC 6 cut(s) 697, 863, 1845, 2258, 2319, 2468
RseI CAYNNNNRTG 4 cut(s) 774, 2184, 3170, 3988
SacI GAGCTC 1 cut(s) 2550
SapI GCTCTTC 2 cut(s) 3555, 4380
ScaI AGTACT 1 cut(s) 698
SchI GAGTC 6 cut(s) 2353, 2406, 2660, 3164, 3188, 3998
ScrFI CCNGG 7 cut(s) 299, 514, 860, 1718, 3170, 4001, 4077
SfcI CTRYAG 2 cut(s) 325, 4032
Sfr274I CTCGAG 1 cut(s) 3590
SinI GGWCC 5 cut(s) 167, 1056, 1129, 1720, 2060
SlaI CTCGAG 1 cut(s) 3590
SmiMI CAYNNNNRTG 4 cut(s) 774, 2184, 3170, 3988
SphI GCATGC 1 cut(s) 2818
SseBI AGGCCT 1 cut(s) 633
SstI GAGCTC 1 cut(s) 2550
StuI AGGCCT 1 cut(s) 633
StyD4I CCNGG 7 cut(s) 297, 512, 858, 1716, 3168, 3999, 4075
StyI CCWWGG 4 cut(s) 387, 634, 1016, 2866
TaaI ACNGT 7 cut(s) 69, 186, 952, 1695, 1911, 1923, 2622
TaiI ACGT 4 cut(s) 788, 1759, 2225, 2467
TaqII GACCGA 1 cut(s) 3223
TatI WGTACW 3 cut(s) 696, 1844, 2467
TauI GCSGC 4 cut(s) 416, 428, 1166, 3755
TscAI CASTG 3 cut(s) 955, 1928, 2384
TseFI GTSAC 6 cut(s) 776, 958, 2177, 2345, 3293, 4106
TseI GCWGC 8 cut(s) 23, 327, 410, 455, 458, 922, 1455, 3664
Tsp45I GTSAC 6 cut(s) 776, 958, 2177, 2345, 3293, 4106
TspGWI ACGGA 6 cut(s) 180, 2267, 2319, 2675, 3281, 4094
TspRI CASTG 3 cut(s) 955, 1928, 2384
Tth111I GACNNNGTC 1 cut(s) 1923
Van91I CCANNNNNTGG 1 cut(s) 2535
Vha464I CTTAAG 2 cut(s) 2182, 2435
VneI GTGCAC 1 cut(s) 767
VpaK11BI GGWCC 5 cut(s) 167, 1056, 1129, 1720, 2060
XagI CCTNNNNNAGG 1 cut(s) 3692
XbaI TCTAGA 5 cut(s) 728, 1831, 3190, 3268, 4081
XceI RCATGY 2 cut(s) 1640, 2818
XcmI CCANNNNNNNNNTGG 2 cut(s) 622, 1017
XhoI CTCGAG 1 cut(s) 3590
XmaJI CCTAGG 3 cut(s) 634, 1016, 2866
XmiI GTMKAC 1 cut(s) 720
XmnI GAANNNNTTC 5 cut(s) 597, 1011, 2159, 3276, 4089
ZraI GACGTC 1 cut(s) 786
ZrmI AGTACT 1 cut(s) 698
Zsp2I ATGCAT 1 cut(s) 2716
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.