Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0001310

Physical Location & Seq

Genomic Coordinates Reverse (-)

10459457 .. 10462967

Gene Structure 3511 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT1G29880.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2190 bp

ATGCGCATCTTCTCTACATTCGTCTTTCATCGCAGACAACAAATCTTCAATCTTCGTCAATTCCAAACCACCACAATCCTTCGCAACCCAATCTCCATCGCTCCGATCCAGATTCCGATGGACGCCACCGAGCAGTCTCTCCGTCAATCTCTTTCCGAGAAATCCTCATCCGTCGAAGCTCAGGGTAACGCCGTCCGAGCTCTCAAGGCTTCCCGTGCAGCTAAACCAGAAATCGATGCTGCCATTGAGCAACTCAACAAATTGAAGCTCGAGAAATCTACCGTCGAGAAGGAGCTTCAGTCTATTATCAGTAGCTCCGGTAATGGTTCGCTTAACCGTGAGGCTTTTCGAAAAGCTGTTGTCAATACTCTCGAGCGGCGTTTGTTCTATATCCCTTCGTTTAAGATCTACAGTGGCGTCGCTGGACTTTTTGATTATGGTCCTCCTGGCTGTGCTATTAAATCCAATGTTCTCAGCTTTTGGCGTCAACATTTCATTCTTGAGGAGAACATGCTAGAAGTTGATTGTCCATGTGTGACACCAGAGGTTGTTCTCAAGGCATCTGGGCATGTAGATAAGTTCACTGATCTTATGGTTAAGGATGAGAAAACTGGAACATGTTACCGTGCTGACCACTTGCTCAAGGATTATTGTACCGAGAAGCTGGAGAAAGATCTTACCATCTCTGCTGAGAAAGCTGCTGAATTGAAGGATGTTCTTGCTGTTATGGAAGATTTTTCTCCTGAACAGCTAGGTGCCAAGATCAGGGAGTATGGGATCACTGCTCCAGACACGAAGAATCCACTCTCTGATCCTTACCCGTTTAATTTGATGTTTCAAACATCCATTGGCCCATCTGGTTTGATTCCTGGTTACATGCGTCCTGAAACTGCTCAAGGTATTTTTGTCAACTTTAAGGACTTGTACTATTACAATGGGAAGAAACTTCCTTTTGCCGCGGCTCAAATTGGTCAAGCCTTTAGAAATGAGATATCTCCTCGACAAGGGCTTCTTAGAGTTCGTGAATTCACGCTGGCAGAGATTGAGCACTTCGTTGATCCTGAGAATAAGTCACATCCTAAGTTCTCTGACGTAGCAAAATTGGAATTCCTTATGTTCCCAAGGGAAGAACAAATGTCTGGCCAATCTGCCAAAAAACTTTGCCTTGGTGAAGCTGTTGCTAAAGGTACTGTGAACAATGAAACTCTAGGATACTTCATTGGGAGAGTGTATCTTTTCCTTACTCGTCTTGGCATTGACAAGGAACGGCTGCGCTTCCGTCAGCATCTAGCAAATGAAATGGCCCACTATGCAGCAGATTGTTGGGATGCTGAAATTGAAAGTTCATATGGGTGGATTGAATGTGTTGGGATTGCAGATAGGTCTGCTTACGACTTACGTGCTCACTCTGACAAAAGTGGTACTCCTCTTGTGGCTGAAGAGAAATTTGCAGAACCTAAAGAAGTAGAGAAACTTGTGATAACTCCTGTGAAGAAAGAACTGGGTCTTGCATTCAAGGGAAATCAAAAGAATGTGGTTGAATCTTTGGAGGCGATGAATGAGGAAGAAGCTATGGAGATGAAAGCAACCCTGGAATCCAAAGGGGAAGTGGAGTTTTACGTGTGTACCCTAAAGAAAAGCGTGAACATCAAGAAAAACATGGTGTCTATATCAAAGGAGAAGAAGAAAGAGCACCAGCGGGTTTTCACTCCATCAGTGATTGAACCATCGTTTGGGATTGGTCGGATCATATATTGTCTGTATGAGCATTGTTTCAGCACAAGGCCAAGCAAAGCAGGGGATGAGCAGTTGAACTTGTTCCGTTTCCCTCCTCTTGTAGCTCCCATCAAGTGCACGGTTTTCCCGCTTGTTCAGAACCAACAATTCGAGGAAGTAGCCAAAGTTATTTCCAAGGAACTCGCCTCTGTCGGTATCTCCCATAAGATTGACATCACTGGTACATCGATAGGGAAGAGATATGCGAGAACCGATGAGCTTGGAGTGCCATTTGCAATAACAGTGGACTCGGATACATCAGTGACAATCAGAGAAAGAGACAGCAAAGATCAAGTCCGAGTCACCTTGAAGGAGGCAGCTTCCGTTGTGAGCTCAGTCTCAGAGGGGAAAATGACGTGGCAAGACGTCTGGGCAACCTTCCCTCACCATTCTTCTGCTGCTGCAGACGAGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000959 GO:0003674 GO:0003824 GO:0004812 GO:0004820 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005768 GO:0005794 GO:0005802 GO:0005829 GO:0006082 GO:0006139 GO:0006399 GO:0006412 GO:0006418 GO:0006426 GO:0006518 GO:0006520 GO:0006725 GO:0006753 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009117 GO:0009165 GO:0009987 GO:0010035 GO:0010038 GO:0010467 GO:0012505 GO:0015959 GO:0015960 GO:0015965 GO:0015966 GO:0016070 GO:0016874 GO:0016875 GO:0018130 GO:0019438 GO:0019538 GO:0019637 GO:0019752 GO:0031410 GO:0031982 GO:0031984 GO:0032543 GO:0034641 GO:0034645 GO:0034654 GO:0034660 GO:0042221 GO:0043038 GO:0043039 GO:0043043 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0043603 GO:0043604 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044281 GO:0044422 GO:0044424 GO:0044431 GO:0044444 GO:0044446 GO:0044464 GO:0046483 GO:0046686 GO:0046983 GO:0050896 GO:0055086 GO:0070127 GO:0070150 GO:0071704 GO:0090304 GO:0090407 GO:0097708 GO:0098791 GO:0140053 GO:0140098 GO:0140101 GO:1901293 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00970 map00970

Pfam Domains

Protein Families

HGTP_anticodon WHEP-TRS tRNA-synt_2b

Protein Analysis

729

Amino Acids

81.94

Weight (kDa)

6.59

Isoelectric Point (pI)

38.3

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
WHEP-TRS	PF00458	56 - 96	5.4e-10	WHEP-TRS domain
tRNA-synt_2b	PF00587	292 - 590	4.1e-11	tRNA synthetase class II core domain (G, H, P, S and T)
HGTP_anticodon	PF03129	617 - 703	3.5e-19	Anticodon binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001310)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G29880
fragaria_vesca	FvH4_4g22441 FvH4_4g22450 FvH4_4g22450 FvH4_4g22610 FvH4_4g22610
malus_domestica	MD13G1131000.v1.1 MD13G1145800.v1.1 MD16G1141200.v1.1
prunus_persica	Prupe.1G214600_v2.0.a1
pyrus_communis	pycom13g11430 pycom13g12530 pycom16g11160 pycom16g11170
rosa_chinensis	RchiOBHm_Chr1g0361881 RchiOBHm_Chr4g0428711 RchiOBHm_Chr4g0428851
rosa_laevigata	RLG00000007120 RLG00000007133 RLG00000027689 RLG00000027690 RLG00000027694
rosa_multiflora	Rmu_co8208336.1_g000001 Rmu_co8210234.1_g000001 Rmu_sc0003316.1_g000006 Rmu_sc0008612.1_g000003 Rmu_sc0018216.1_g000001 Rmu_ssc0000124.1_g000013
rosa_roxburghii	Rroxscaffold_4G00294630 Rroxscaffold_5G00370530
rosa_rugosa	Rorug01G0292100 Rorug04G0227400 Rorug04G0227500 Rorug04G0229700
rosa_samantha	Rh1AG302800 Rh1BG265900 Rh1BG266000 Rh1CG284000 Rh1DG295900 Rh1DG296000 Rh4AG284700 Rh4AG284900 Rh4AG286400 Rh4BG290700 Rh4BG290900 Rh4BG292200 Rh4CG308200 Rh4DG288200 Rh4DG289400
rosa_wichuraiana	Rw0G020620 Rw1G026830 Rw4G024720 Rw4G024830 Rw7G040280

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	2145
Acc16I	TGCGCA	1 cut(s)	5
AccB1I	GGYRCC	1 cut(s)	755
AccB7I	CCANNNNNTGG	1 cut(s)	1733
AccBSI	CCGCTC	1 cut(s)	376
AccII	CGCG	1 cut(s)	959
AciI	CCGC	5 cut(s)	376, 957, 959, 1699, 1865
AclWI	GGATC	5 cut(s)	100, 785, 806, 1052, 1754
AcoI	YGGCCR	1 cut(s)	1141
AcsI	RAATTY	3 cut(s)	1025, 1106, 1445
AcuI	CTGAAG	2 cut(s)	281, 1458
AcyI	GRCGYC	4 cut(s)	123, 417, 484, 2142
AfaI	GTAC	6 cut(s)	655, 926, 1189, 1423, 1627, 1960
AfiI	CCNNNNNNNGG	3 cut(s)	765, 1004, 1733
AflIII	ACRYGT	2 cut(s)	617, 1620
AjiI	CACGTC	1 cut(s)	2133
AjnI	CCWGG	3 cut(s)	445, 868, 1590
AjuI	GAANNNNNNNTTGG	2 cut(s)	1716, 1748
Alw21I	GWGCWC	6 cut(s)	202, 1050, 1405, 1695, 1856, 2111
Alw26I	GTCTC	3 cut(s)	141, 2049, 2119
Alw44I	GTGCAC	1 cut(s)	1852
AlwI	GGATC	5 cut(s)	100, 785, 806, 1052, 1754
Ama87I	CYCGRG	2 cut(s)	269, 371
AoxI	GGCC	4 cut(s)	850, 1141, 1302, 1784
ApaLI	GTGCAC	1 cut(s)	1852
ApeKI	GCWGC	8 cut(s)	218, 239, 698, 1270, 1313, 2093, 2174, 2177
ApoI	RAATTY	3 cut(s)	1025, 1106, 1445
ArsI	GACNNNNNNTTYG	2 cut(s)	2055, 2087
Asp700I	GAANNNNTTC	1 cut(s)	1817
AspLEI	GCGC	2 cut(s)	6, 1275
AspS9I	GGNCC	3 cut(s)	440, 851, 1303
AsuHPI	GGTGA	3 cut(s)	1181, 2071, 2153
AsuII	TTCGAA	1 cut(s)	349
AvaI	CYCGRG	2 cut(s)	269, 371
AvaII	GGWCC	1 cut(s)	440
BaeGI	GKGCMC	1 cut(s)	1856
BaeI	ACNNNNGTAYC	4 cut(s)	1609, 1642, 2022, 2055
BalI	TGGCCA	1 cut(s)	1143
BanI	GGYRCC	1 cut(s)	755
BanII	GRGCYC	2 cut(s)	202, 2111
Bbv12I	GWGCWC	6 cut(s)	202, 1050, 1405, 1695, 1856, 2111
BbvI	GCAGC	8 cut(s)	226, 230, 685, 1257, 1325, 2105, 2161, 2164
BccI	CCATC	7 cut(s)	104, 112, 689, 862, 1720, 1735, 1853
BceAI	ACGGC	2 cut(s)	176, 1283
BcgI	CGANNNNNNTGC	2 cut(s)	1382, 1416
BciT130I	CCWGG	3 cut(s)	447, 870, 1592
BciVI	GTATCC	2 cut(s)	1205, 2023
BcoDI	GTCTC	3 cut(s)	141, 2049, 2119
BfaI	CTAG	4 cut(s)	515, 752, 1208, 1289
BfmI	CTRYAG	2 cut(s)	409, 2178
BfuI	GTATCC	2 cut(s)	1205, 2023
BglII	AGATCT	2 cut(s)	405, 673
Bme1390I	CCNGG	3 cut(s)	447, 870, 1592
Bme18I	GGWCC	1 cut(s)	440
BmeT110I	CYCGRG	2 cut(s)	269, 371
BmgBI	CACGTC	1 cut(s)	2133
BmgT120I	GGNCC	3 cut(s)	440, 851, 1303
BmiI	GGNNCC	1 cut(s)	757
BmrFI	CCNGG	3 cut(s)	447, 870, 1592
BmrI	ACTGGG	1 cut(s)	1511
BmsI	GCATC	5 cut(s)	15, 226, 569, 1294, 1318
BmuI	ACTGGG	1 cut(s)	1511
BplI	GAGNNNNNCTC	2 cut(s)	149, 181
BpmI	CTGGAG	2 cut(s)	686, 771
Bpu10I	CCTNAGC	1 cut(s)	180
Bpu14I	TTCGAA	1 cut(s)	349
BpuEI	CTTGAG	5 cut(s)	188, 521, 539, 626, 879
Bsa29I	ATCGAT	2 cut(s)	234, 1964
BsaAI	YACGTR	2 cut(s)	1400, 1621
BsaBI	GATNNNNATC	1 cut(s)	1949
BsaHI	GRCGYC	4 cut(s)	123, 417, 484, 2142
BsaJI	CCNNGG	5 cut(s)	957, 1121, 1165, 1590, 1911
BsaWI	WCCGGW	1 cut(s)	317
BsaXI	ACNNNNNCTCC	4 cut(s)	77, 107, 284, 314
Bsc4I	CCNNNNNNNGG	3 cut(s)	765, 1004, 1733
Bse1I	ACTGG	3 cut(s)	616, 1506, 1960
Bse8I	GATNNNNATC	1 cut(s)	1949
BseBI	CCWGG	3 cut(s)	447, 870, 1592
BseCI	ATCGAT	2 cut(s)	234, 1964
BseDI	CCNNGG	5 cut(s)	957, 1121, 1165, 1590, 1911
BseGI	GGATG	7 cut(s)	167, 607, 718, 842, 1075, 1333, 1807
BseJI	GATNNNNATC	1 cut(s)	1949
BseLI	CCNNNNNNNGG	3 cut(s)	765, 1004, 1733
BseMII	CTCAG	6 cut(s)	194, 487, 681, 1053, 2124, 2130
BseNI	ACTGG	3 cut(s)	616, 1506, 1960
BseRI	GAGGAG	4 cut(s)	518, 987, 1416, 1821
BseSI	GKGCMC	1 cut(s)	1856
BseXI	GCAGC	8 cut(s)	226, 230, 685, 1257, 1325, 2105, 2161, 2164
BsgI	GTGCAG	1 cut(s)	237
Bsh1236I	CGCG	1 cut(s)	959
BshFI	GGCC	4 cut(s)	852, 1143, 1304, 1786
BshNI	GGYRCC	1 cut(s)	755
BshVI	ATCGAT	2 cut(s)	234, 1964
BsiHKAI	GWGCWC	6 cut(s)	202, 1050, 1405, 1695, 1856, 2111
BsiHKCI	CYCGRG	2 cut(s)	269, 371
BsiSI	CCGG	1 cut(s)	318
BslI	CCNNNNNNNGG	3 cut(s)	765, 1004, 1733
BsmAI	GTCTC	3 cut(s)	141, 2049, 2119
BsmI	GAATGC	1 cut(s)	1511
BsnI	GGCC	4 cut(s)	852, 1143, 1304, 1786
BsoBI	CYCGRG	2 cut(s)	269, 371
Bsp119I	TTCGAA	1 cut(s)	349
Bsp1286I	GDGCHC	6 cut(s)	202, 1050, 1405, 1695, 1856, 2111
BspACI	CCGC	5 cut(s)	376, 957, 959, 1699, 1865
BspANI	GGCC	4 cut(s)	852, 1143, 1304, 1786
BspCNI	CTCAG	6 cut(s)	193, 486, 682, 1054, 2123, 2129
BspDI	ATCGAT	2 cut(s)	234, 1964
BspFNI	CGCG	1 cut(s)	959
BspLI	GGNNCC	1 cut(s)	757
BspMAI	CTGCAG	1 cut(s)	2182
BspPI	GGATC	5 cut(s)	100, 785, 806, 1052, 1754
BspT104I	TTCGAA	1 cut(s)	349
BspT107I	GGYRCC	1 cut(s)	755
BsrBI	CCGCTC	1 cut(s)	376
BsrI	ACTGG	3 cut(s)	616, 1506, 1960
BssECI	CCNNGG	5 cut(s)	957, 1121, 1165, 1590, 1911
BssNI	GRCGYC	4 cut(s)	123, 417, 484, 2142
BssT1I	CCWWGG	3 cut(s)	1121, 1165, 1911
Bst2UI	CCWGG	3 cut(s)	447, 870, 1592
Bst4CI	ACNGT	7 cut(s)	283, 338, 413, 626, 1192, 1858, 2020
Bst6I	CTCTTC	2 cut(s)	1434, 1967
BstACI	GRCGYC	4 cut(s)	123, 417, 484, 2142
BstBAI	YACGTR	2 cut(s)	1400, 1621
BstBI	TTCGAA	1 cut(s)	349
BstC8I	GCNNGC	1 cut(s)	1035
BstDEI	CTNAG	8 cut(s)	180, 473, 690, 1013, 1062, 1080, 2110, 2116
BstDSI	CCRYGG	1 cut(s)	957
BstENI	CCTNNNNNAGG	1 cut(s)	1002
BstF5I	GGATG	7 cut(s)	167, 607, 718, 842, 1075, 1333, 1807
BstFNI	CGCG	1 cut(s)	959
BstHHI	GCGC	2 cut(s)	6, 1275
BstMAI	GTCTC	3 cut(s)	141, 2049, 2119
BstMWI	GCNNNNNNNGC	6 cut(s)	197, 206, 215, 695, 1310, 2002
BstNI	CCWGG	3 cut(s)	447, 870, 1592
BstNSI	RCATGY	4 cut(s)	514, 572, 621, 880
BstSCI	CCNGG	3 cut(s)	445, 868, 1590
BstSFI	CTRYAG	2 cut(s)	409, 2178
BstSLI	GKGCMC	1 cut(s)	1856
BstUI	CGCG	1 cut(s)	959
BstV1I	GCAGC	8 cut(s)	226, 230, 685, 1257, 1325, 2105, 2161, 2164
BstX2I	RGATCY	2 cut(s)	405, 673
BstYI	RGATCY	2 cut(s)	405, 673
Bsu15I	ATCGAT	2 cut(s)	234, 1964
BsuI	GTATCC	2 cut(s)	1205, 2023
BsuRI	GGCC	4 cut(s)	852, 1143, 1304, 1786
BsuTUI	ATCGAT	2 cut(s)	234, 1964
BtgI	CCRYGG	1 cut(s)	957
BtgZI	GCGATG	3 cut(s)	14, 82, 1568
BtrI	CACGTC	1 cut(s)	2133
BtsCI	GGATG	7 cut(s)	167, 607, 718, 842, 1075, 1333, 1807
BtsI	GCAGTG	1 cut(s)	780
BtsIMutI	CAGTG	7 cut(s)	418, 582, 780, 1722, 1953, 2025, 2043
Cac8I	GCNNGC	1 cut(s)	1035
CfoI	GCGC	2 cut(s)	6, 1275
Cfr13I	GGNCC	3 cut(s)	440, 851, 1303
Cfr42I	CCGCGG	1 cut(s)	960
ClaI	ATCGAT	2 cut(s)	234, 1964
CseI	GACGC	4 cut(s)	131, 406, 473, 869
Csp6I	GTAC	6 cut(s)	654, 925, 1188, 1422, 1626, 1959
CspCI	CAANNNNNGTGG	2 cut(s)	2001, 2036
CviAII	CATG	6 cut(s)	511, 531, 569, 618, 877, 1660
CviQI	GTAC	6 cut(s)	654, 925, 1188, 1422, 1626, 1959
DdeI	CTNAG	8 cut(s)	180, 473, 690, 1013, 1062, 1080, 2110, 2116
EaeI	YGGCCR	1 cut(s)	1141
Eam1104I	CTCTTC	2 cut(s)	1434, 1967
EarI	CTCTTC	2 cut(s)	1434, 1967
Ecl136II	GAGCTC	2 cut(s)	200, 2109
Eco130I	CCWWGG	3 cut(s)	1121, 1165, 1911
Eco24I	GRGCYC	2 cut(s)	202, 2111
Eco32I	GATATC	1 cut(s)	993
Eco47I	GGWCC	1 cut(s)	440
Eco53kI	GAGCTC	2 cut(s)	200, 2109
Eco57I	CTGAAG	2 cut(s)	281, 1458
Eco88I	CYCGRG	2 cut(s)	269, 371
EcoICRI	GAGCTC	2 cut(s)	200, 2109
EcoNI	CCTNNNNNAGG	1 cut(s)	1002
EcoRI	GAATTC	2 cut(s)	1025, 1106
EcoRII	CCWGG	3 cut(s)	445, 868, 1590
EcoRV	GATATC	1 cut(s)	993
EcoT14I	CCWWGG	3 cut(s)	1121, 1165, 1911
EcoT38I	GRGCYC	2 cut(s)	202, 2111
ErhI	CCWWGG	3 cut(s)	1121, 1165, 1911
FaeI	CATG	6 cut(s)	514, 534, 572, 621, 880, 1663
FalI	AAGNNNNNCTT	2 cut(s)	996, 1028
FatI	CATG	6 cut(s)	510, 530, 568, 617, 876, 1659
FauI	CCCGC	2 cut(s)	1692, 1872
FauNDI	CATATG	1 cut(s)	1348
FokI	GGATG	7 cut(s)	154, 614, 725, 829, 1062, 1340, 1814
FriOI	GRGCYC	2 cut(s)	202, 2111
FspAI	RTGCGCAY	1 cut(s)	5
FspBI	CTAG	4 cut(s)	515, 752, 1208, 1289
FspI	TGCGCA	1 cut(s)	5
GlaI	GCGC	2 cut(s)	5, 1274
GsuI	CTGGAG	2 cut(s)	686, 771
HaeIII	GGCC	4 cut(s)	852, 1143, 1304, 1786
HapII	CCGG	1 cut(s)	318
HgaI	GACGC	4 cut(s)	131, 406, 473, 869
HhaI	GCGC	2 cut(s)	6, 1275
Hin1I	GRCGYC	4 cut(s)	123, 417, 484, 2142
Hin1II	CATG	6 cut(s)	514, 534, 572, 621, 880, 1663
Hin6I	GCGC	2 cut(s)	4, 1273
HinP1I	GCGC	2 cut(s)	4, 1273
HincII	GTYRAC	2 cut(s)	488, 910
HindII	GTYRAC	2 cut(s)	488, 910
HinfI	GANTC	7 cut(s)	112, 799, 865, 1541, 1595, 2024, 2076
HpaII	CCGG	1 cut(s)	318
HphI	GGTGA	3 cut(s)	1181, 2071, 2153
Hpy166II	GTNNAC	8 cut(s)	488, 582, 910, 1195, 1626, 1645, 1854, 2023
Hpy8I	GTNNAC	8 cut(s)	488, 582, 910, 1195, 1626, 1645, 1854, 2023
Hpy99I	CGWCG	3 cut(s)	176, 287, 422
HpyAV	CCTTC	6 cut(s)	89, 283, 405, 703, 2080, 2164
HpyCH4III	ACNGT	7 cut(s)	283, 338, 413, 626, 1192, 1858, 2020
HpyCH4IV	ACGT	5 cut(s)	1092, 1399, 1620, 2132, 2142
HpyCH4V	TGCA	8 cut(s)	218, 1313, 1376, 1451, 1511, 1854, 2012, 2180
HpyF10VI	GCNNNNNNNGC	6 cut(s)	197, 206, 215, 695, 1310, 2002
HpyF3I	CTNAG	8 cut(s)	180, 473, 690, 1013, 1062, 1080, 2110, 2116
HpySE526I	ACGT	5 cut(s)	1092, 1399, 1620, 2132, 2142
Hsp92I	GRCGYC	4 cut(s)	123, 417, 484, 2142
Hsp92II	CATG	6 cut(s)	514, 534, 572, 621, 880, 1663
HspAI	GCGC	2 cut(s)	4, 1273
KspI	CCGCGG	1 cut(s)	960
LmnI	GCTCC	5 cut(s)	106, 292, 320, 790, 1846
Lsp1109I	GCAGC	8 cut(s)	226, 230, 685, 1257, 1325, 2105, 2161, 2164
LweI	GCATC	5 cut(s)	15, 226, 569, 1294, 1318
MaeI	CTAG	4 cut(s)	515, 752, 1208, 1289
MaeII	ACGT	5 cut(s)	1092, 1399, 1620, 2132, 2142
MaeIII	GTNAC	7 cut(s)	185, 535, 620, 872, 1071, 2038, 2077
MbiI	CCGCTC	1 cut(s)	376
MflI	RGATCY	2 cut(s)	405, 673
MhlI	GDGCHC	6 cut(s)	202, 1050, 1405, 1695, 1856, 2111
MlsI	TGGCCA	1 cut(s)	1143
MluNI	TGGCCA	1 cut(s)	1143
MlyI	GAGTC	2 cut(s)	2018, 2085
MmeI	TCCRAC	1 cut(s)	1724
Mox20I	TGGCCA	1 cut(s)	1143
MroXI	GAANNNNTTC	1 cut(s)	1817
MscI	TGGCCA	1 cut(s)	1143
MseI	TTAA	6 cut(s)	333, 402, 459, 597, 825, 915
MslI	CAYNNNNRTG	1 cut(s)	1351
Msp20I	TGGCCA	1 cut(s)	1143
MspA1I	CMGCKG	2 cut(s)	959, 1699
MspI	CCGG	1 cut(s)	318
MspR9I	CCNGG	3 cut(s)	447, 870, 1592
Mva1269I	GAATGC	1 cut(s)	1511
MvaI	CCWGG	3 cut(s)	447, 870, 1592
MvnI	CGCG	1 cut(s)	959
MwoI	GCNNNNNNNGC	6 cut(s)	197, 206, 215, 695, 1310, 2002
NdeI	CATATG	1 cut(s)	1348
NlaIII	CATG	6 cut(s)	514, 534, 572, 621, 880, 1663
NlaIV	GGNNCC	1 cut(s)	757
NmuCI	GTSAC	4 cut(s)	535, 1071, 2038, 2077
NsbI	TGCGCA	1 cut(s)	5
NspI	RCATGY	4 cut(s)	514, 572, 621, 880
NspV	TTCGAA	1 cut(s)	349
PaeR7I	CTCGAG	2 cut(s)	269, 371
PciI	ACATGT	1 cut(s)	617
PctI	GAATGC	1 cut(s)	1511
PdmI	GAANNNNTTC	1 cut(s)	1817
PfeI	GAWTC	5 cut(s)	112, 799, 865, 1541, 1595
PflMI	CCANNNNNTGG	1 cut(s)	1733
PleI	GAGTC	2 cut(s)	2018, 2084
PpsI	GAGTC	2 cut(s)	2018, 2084
Ppu21I	YACGTR	2 cut(s)	1400, 1621
PscI	ACATGT	1 cut(s)	617
Psp124BI	GAGCTC	2 cut(s)	202, 2111
Psp6I	CCWGG	3 cut(s)	445, 868, 1590
PspGI	CCWGG	3 cut(s)	445, 868, 1590
PspN4I	GGNNCC	1 cut(s)	757
PspPI	GGNCC	3 cut(s)	440, 851, 1303
PstI	CTGCAG	1 cut(s)	2182
PsuI	RGATCY	2 cut(s)	405, 673
RsaI	GTAC	6 cut(s)	655, 926, 1189, 1423, 1627, 1960
RsaNI	GTAC	6 cut(s)	654, 925, 1188, 1422, 1626, 1959
RseI	CAYNNNNRTG	1 cut(s)	1351
SacI	GAGCTC	2 cut(s)	202, 2111
SacII	CCGCGG	1 cut(s)	960
SaqAI	TTAA	6 cut(s)	333, 402, 459, 597, 825, 915
Sau96I	GGNCC	3 cut(s)	440, 851, 1303
SchI	GAGTC	2 cut(s)	2018, 2085
ScrFI	CCNGG	3 cut(s)	447, 870, 1592
SduI	GDGCHC	6 cut(s)	202, 1050, 1405, 1695, 1856, 2111
SfaNI	GCATC	5 cut(s)	15, 226, 569, 1294, 1318
SfcI	CTRYAG	2 cut(s)	409, 2178
Sfr274I	CTCGAG	2 cut(s)	269, 371
Sfr303I	CCGCGG	1 cut(s)	960
SfuI	TTCGAA	1 cut(s)	349
SgrBI	CCGCGG	1 cut(s)	960
SinI	GGWCC	1 cut(s)	440
SlaI	CTCGAG	2 cut(s)	269, 371
SmiMI	CAYNNNNRTG	1 cut(s)	1351
SmlI	CTYRAG	7 cut(s)	203, 269, 371, 500, 554, 641, 894
SmoI	CTYRAG	7 cut(s)	203, 269, 371, 500, 554, 641, 894
SsiI	CCGC	5 cut(s)	376, 957, 959, 1699, 1865
SspMI	CTAG	4 cut(s)	515, 752, 1208, 1289
SstI	GAGCTC	2 cut(s)	202, 2111
StyD4I	CCNGG	3 cut(s)	445, 868, 1590
StyI	CCWWGG	3 cut(s)	1121, 1165, 1911
TaaI	ACNGT	7 cut(s)	283, 338, 413, 626, 1192, 1858, 2020
TaiI	ACGT	5 cut(s)	1095, 1402, 1623, 2135, 2145
TaqI	TCGA	9 cut(s)	174, 234, 270, 285, 349, 372, 1000, 1887, 1964
TatI	WGTACW	1 cut(s)	924
TauI	GCSGC	3 cut(s)	379, 959, 962
TfiI	GAWTC	5 cut(s)	112, 799, 865, 1541, 1595
Tru1I	TTAA	6 cut(s)	333, 402, 459, 597, 825, 915
Tru9I	TTAA	6 cut(s)	333, 402, 459, 597, 825, 915
TscAI	CASTG	7 cut(s)	418, 589, 787, 1722, 1960, 2025, 2043
TseFI	GTSAC	4 cut(s)	535, 1071, 2038, 2077
TseI	GCWGC	8 cut(s)	218, 239, 698, 1270, 1313, 2093, 2174, 2177
Tsp45I	GTSAC	4 cut(s)	535, 1071, 2038, 2077
TspDTI	ATGAA	8 cut(s)	17, 484, 1207, 1215, 1311, 1335, 1571, 1595
TspGWI	ACGGA	5 cut(s)	131, 160, 1268, 1811, 2089
TspRI	CASTG	7 cut(s)	418, 589, 787, 1722, 1960, 2025, 2043
Van91I	CCANNNNNTGG	1 cut(s)	1733
VneI	GTGCAC	1 cut(s)	1852
VpaK11BI	GGWCC	1 cut(s)	440
XagI	CCTNNNNNAGG	1 cut(s)	1002
XapI	RAATTY	3 cut(s)	1025, 1106, 1445
XceI	RCATGY	4 cut(s)	514, 572, 621, 880
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1606
XhoI	CTCGAG	2 cut(s)	269, 371
XmnI	GAANNNNTTC	1 cut(s)	1817
XspI	CTAG	4 cut(s)	515, 752, 1208, 1289
ZraI	GACGTC	1 cut(s)	2143

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.