Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr4

Orthogroup ID

OG0001310

Physical Location & Seq

Genomic Coordinates Forward (+)

50675664 .. 50678196

Gene Structure 2533 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw4G024720.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1587 bp

ATGAGTGATAATACAGAAAGCTCCCGCCGTGCTCTGGGCAACACTCTTGAACGGCGCTTCTTTTACATTCCTTCTTTCAAGATTTACGGCGCTGTTGCTGGCCTCTACGACTATGGCTCGCCCGGCTGCAAATCAAGAAGAATGTCCTTTCACTTTGGCATCAGGTTAGGGCATCTGGCCATGTATATAAGTTCACTGATCTCTATGGTTAAGGATAAGAAGAAAGGGACTTGCTACAAGGCTGATCACTTGCTCAAGGATTTCTGCAATAAGAAGCTTGAAGAGGACCGTCACATTAGTTCAGAGATGGCAATGGAGCTGAAAGAAGTGCTTTCGAAATTGGACGGTCTATCAGCTGAAGAGCTGGGTGCATGCATCAAGAAATATGGGATTACAGCCCCTGAAACAGATAACCATCCTCTCTCAGATCCTTATCCTTTCAATTTGATGTTTCAAACATCAATTGGTCCGTCTGGTTCGAGTACTGGTTTCTTTCGCCCAGAAACTGCACAAGGCATATTTGTGAATTTTATGGACATTTACTATGACAATGGGTGCAAGCTGCCTTTTGCTGTTGCTTGCGCAAGTTGGCCAGGCTTTTCGAAACGAGTTCACACTCGCGAGATTGAGCACTTTGTTGATCCTAAAGACAAATCTCACCTGAAATTCCCCAGCGTTGAGAAGTTGGAACTTCTGATGTTCCCAAGGGATGAACAAAAGCCTTGGCAATCTGCAAGATTAATCAAAGTGGGTGAAGCGGTGCATTCTAAGATTGTGGAGAATGAAACTCTTGGCTACTTCATTGGGAAAGTATATCTCTTCCTCACTCGTCTGGGTATAGACAAGAACCGTTTGAGGTTCAGGCAACACCTTGCTAAAGAAATGGCTCACTATGCTACTTCCTATGGCTGGATTGAGTGTGTCGGTATTGCAGATAGATCTGCATATGACTTGAAGGCTCATCCGGGGAAAAGTCGTTTTGAGGCACATGAACAACTTTCAGAACCAAGAGACGTGGAGAAATTGGTTATATCTCTGGTAAAGAAACAGATTGGCCCTGCTTTGGGGAAGAAGCAAAAGAATGTGCTTGAAGCTTTGAAGGCTATGAATGAAGAAGAAATTTCAAAGATGATGGCTGAGTTAGACTCAAAAGGGGAGGTGGACTTCTTTGTCTGCACTCTTGGGGAACATGTATCTATTAAGAGCAGTATGGTGACAATTTCAAAGGTTAAAACAAGAGAACATCAAAGAAAATTCACACCCTCAGTAATCGAGCCTTCATTTGGTATTGGGCGGATTATATATTGTCTCTTTGAGCATTCCTTCTACACCAGACCAGATAAAACTGGGGATGAACAATTGAATGTGTTTTGCTTTAACCCACTTGTGGCGCCTTTTAAGTGCATGGTTTTCCCTCTGGTTCGGAACCAACAATTTGAGGCTGTTGCTAAGGACATTTCCAAGTCATTGACTGCTGCTGGCATATCGCATAAAATGGATACTACAGGTACCTCGATTGGGAAACGTTATGCACGTACTGATGAGCTCGGTGTACCCTTTGCGATAATGGTTGATTCTACATCCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000959 GO:0003674 GO:0003824 GO:0004812 GO:0004820 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005768 GO:0005794 GO:0005802 GO:0005829 GO:0006082 GO:0006139 GO:0006399 GO:0006412 GO:0006418 GO:0006426 GO:0006518 GO:0006520 GO:0006725 GO:0006753 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009117 GO:0009165 GO:0009987 GO:0010035 GO:0010038 GO:0010467 GO:0012505 GO:0015959 GO:0015960 GO:0015965 GO:0015966 GO:0016070 GO:0016874 GO:0016875 GO:0018130 GO:0019438 GO:0019538 GO:0019637 GO:0019752 GO:0031410 GO:0031982 GO:0031984 GO:0032543 GO:0034641 GO:0034645 GO:0034654 GO:0034660 GO:0042221 GO:0043038 GO:0043039 GO:0043043 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0043603 GO:0043604 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044281 GO:0044422 GO:0044424 GO:0044431 GO:0044444 GO:0044446 GO:0044464 GO:0046483 GO:0046686 GO:0046983 GO:0050896 GO:0055086 GO:0070127 GO:0070150 GO:0071704 GO:0090304 GO:0090407 GO:0097708 GO:0098791 GO:0140053 GO:0140098 GO:0140101 GO:1901293 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00970 map00970

Pfam Domains

Protein Families

HGTP_anticodon WHEP-TRS tRNA-synt_2b

Protein Analysis

528

Amino Acids

59.71

Weight (kDa)

8.86

Isoelectric Point (pI)

39.21

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
HGTP_anticodon	PF03129	467 - 526	9.2e-12	Anticodon binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0001310)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G29880
fragaria_vesca	FvH4_4g22441 FvH4_4g22450 FvH4_4g22450 FvH4_4g22610 FvH4_4g22610
malus_domestica	MD13G1131000.v1.1 MD13G1145800.v1.1 MD16G1141200.v1.1
prunus_persica	Prupe.1G214600_v2.0.a1
pyrus_communis	pycom13g11430 pycom13g12530 pycom16g11160 pycom16g11170
rosa_chinensis	RchiOBHm_Chr1g0361881 RchiOBHm_Chr4g0428711 RchiOBHm_Chr4g0428851
rosa_laevigata	RLG00000007120 RLG00000007133 RLG00000027689 RLG00000027690 RLG00000027694
rosa_multiflora	Rmu_co8208336.1_g000001 Rmu_co8210234.1_g000001 Rmu_sc0003316.1_g000006 Rmu_sc0008612.1_g000003 Rmu_sc0018216.1_g000001 Rmu_ssc0000124.1_g000013
rosa_roxburghii	Rroxscaffold_4G00294630 Rroxscaffold_5G00370530
rosa_rugosa	Rorug01G0292100 Rorug04G0227400 Rorug04G0227500 Rorug04G0229700
rosa_samantha	Rh1AG302800 Rh1BG265900 Rh1BG266000 Rh1CG284000 Rh1DG295900 Rh1DG296000 Rh4AG284700 Rh4AG284900 Rh4AG286400 Rh4BG290700 Rh4BG290900 Rh4BG292200 Rh4CG308200 Rh4DG288200 Rh4DG289400
rosa_wichuraiana	Rw0G020620 Rw1G026830 Rw4G024720 Rw4G024830 Rw7G040280

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1169
Acc16I	TGCGCA	1 cut(s)	583
Acc65I	GGTACC	1 cut(s)	1508
AccB1I	GGYRCC	2 cut(s)	1390, 1508
AccII	CGCG	1 cut(s)	621
AciI	CCGC	3 cut(s)	25, 758, 1294
AclI	AACGTT	1 cut(s)	1525
AclWI	GGATC	2 cut(s)	422, 635
AcoI	YGGCCR	2 cut(s)	177, 590
AcsI	RAATTY	4 cut(s)	526, 665, 1119, 1253
AcuI	CTGAAG	1 cut(s)	378
AcyI	GRCGYC	1 cut(s)	1391
AfaI	GTAC	4 cut(s)	484, 1510, 1537, 1554
AfiI	CCNNNNNNNGG	7 cut(s)	34, 909, 1063, 1064, 1283, 1387, 1518
AflIII	ACRYGT	1 cut(s)	1189
AjiI	CACGTC	1 cut(s)	1015
AjnI	CCWGG	1 cut(s)	592
AluBI	AGCT	8 cut(s)	21, 277, 319, 356, 364, 562, 1094, 1546
AluI	AGCT	8 cut(s)	21, 277, 319, 356, 364, 562, 1094, 1546
Alw21I	GWGCWC	3 cut(s)	34, 633, 1548
Alw26I	GTCTC	2 cut(s)	1005, 1313
AlwI	GGATC	2 cut(s)	422, 635
AlwNI	CAGNNNCTG	2 cut(s)	401, 506
AoxI	GGCC	4 cut(s)	100, 177, 590, 1054
ApeKI	GCWGC	3 cut(s)	126, 562, 1475
ApoI	RAATTY	4 cut(s)	526, 665, 1119, 1253
AseI	ATTAAT	1 cut(s)	740
Asp718I	GGTACC	1 cut(s)	1508
AspLEI	GCGC	4 cut(s)	57, 92, 584, 1393
AspS9I	GGNCC	3 cut(s)	286, 467, 1055
AsuC2I	CCSGG	2 cut(s)	123, 966
AsuHPI	GGTGA	3 cut(s)	650, 764, 1225
AsuII	TTCGAA	2 cut(s)	335, 602
AvaII	GGWCC	2 cut(s)	286, 467
BalI	TGGCCA	2 cut(s)	179, 592
BanI	GGYRCC	2 cut(s)	1390, 1508
BanII	GRGCYC	1 cut(s)	1548
Bbv12I	GWGCWC	3 cut(s)	34, 633, 1548
BbvI	GCAGC	3 cut(s)	113, 549, 1462
BccI	CCATC	3 cut(s)	301, 423, 1126
BceAI	ACGGC	3 cut(s)	12, 68, 103
BciT130I	CCWGG	1 cut(s)	594
BciVI	GTATCC	1 cut(s)	1492
BclI	TGATCA	1 cut(s)	244
BcnI	CCSGG	2 cut(s)	123, 966
BcoDI	GTCTC	2 cut(s)	1005, 1313
BfaI	CTAG	1 cut(s)	1585
BfmI	CTRYAG	1 cut(s)	1503
BfoI	RGCGCY	3 cut(s)	58, 93, 1394
BfuI	GTATCC	1 cut(s)	1492
BglII	AGATCT	1 cut(s)	938
BisI	GCNGC	3 cut(s)	127, 563, 1476
BlsI	GCNGC	3 cut(s)	128, 564, 1477
BmcAI	AGTACT	1 cut(s)	484
Bme1390I	CCNGG	3 cut(s)	123, 594, 966
Bme18I	GGWCC	2 cut(s)	286, 467
BmgBI	CACGTC	1 cut(s)	1015
BmgT120I	GGNCC	3 cut(s)	286, 467, 1055
BmiI	GGNNCC	3 cut(s)	1392, 1427, 1510
BmrFI	CCNGG	3 cut(s)	123, 594, 966
BmrI	ACTGGG	1 cut(s)	1356
BmsI	GCATC	3 cut(s)	168, 181, 384
BmuI	ACTGGG	1 cut(s)	1356
BplI	GAGNNNNNCTC	2 cut(s)	1130, 1162
Bpu10I	CCTNAGC	1 cut(s)	1449
Bpu14I	TTCGAA	2 cut(s)	335, 602
BpuEI	CTTGAG	1 cut(s)	239
BpuMI	CCSGG	2 cut(s)	123, 966
BsaAI	YACGTR	1 cut(s)	1535
BsaBI	GATNNNNATC	2 cut(s)	414, 432
BsaHI	GRCGYC	1 cut(s)	1391
BsaJI	CCNNGG	3 cut(s)	704, 722, 965
Bsc4I	CCNNNNNNNGG	7 cut(s)	34, 909, 1063, 1064, 1283, 1387, 1518
Bse1I	ACTGG	2 cut(s)	490, 1351
Bse3DI	GCAATG	1 cut(s)	318
Bse8I	GATNNNNATC	2 cut(s)	414, 432
BseBI	CCWGG	1 cut(s)	594
BseDI	CCNNGG	3 cut(s)	704, 722, 965
BseGI	GGATG	5 cut(s)	415, 715, 961, 1357, 1580
BseJI	GATNNNNATC	2 cut(s)	414, 432
BseLI	CCNNNNNNNGG	7 cut(s)	34, 909, 1063, 1064, 1283, 1387, 1518
BseMI	GCAATG	1 cut(s)	318
BseMII	CTCAG	3 cut(s)	438, 1128, 1278
BseNI	ACTGG	2 cut(s)	490, 1351
BseXI	GCAGC	3 cut(s)	113, 549, 1462
BseYI	CCCAGC	2 cut(s)	364, 671
BsgI	GTGCAG	2 cut(s)	492, 1159
Bsh1236I	CGCG	1 cut(s)	621
BshFI	GGCC	4 cut(s)	102, 179, 592, 1056
BshNI	GGYRCC	2 cut(s)	1390, 1508
BsiHKAI	GWGCWC	3 cut(s)	34, 633, 1548
BsiSI	CCGG	2 cut(s)	123, 965
BslFI	GGGAC	1 cut(s)	241
BslI	CCNNNNNNNGG	7 cut(s)	34, 909, 1063, 1064, 1283, 1387, 1518
BsmAI	GTCTC	2 cut(s)	1005, 1313
BsmBI	CGTCTC	1 cut(s)	1005
BsmFI	GGGAC	1 cut(s)	241
BsmI	GAATGC	2 cut(s)	763, 1318
BsnI	GGCC	4 cut(s)	102, 179, 592, 1056
Bsp119I	TTCGAA	2 cut(s)	335, 602
Bsp1286I	GDGCHC	3 cut(s)	34, 633, 1548
Bsp143I	GATC	5 cut(s)	198, 244, 427, 640, 938
Bsp68I	TCGCGA	1 cut(s)	621
BspACI	CCGC	3 cut(s)	25, 758, 1294
BspANI	GGCC	4 cut(s)	102, 179, 592, 1056
BspCNI	CTCAG	3 cut(s)	437, 1129, 1277
BspFNI	CGCG	1 cut(s)	621
BspLI	GGNNCC	3 cut(s)	1392, 1427, 1510
BspPI	GGATC	2 cut(s)	422, 635
BspQI	GCTCTTC	1 cut(s)	354
BspT104I	TTCGAA	2 cut(s)	335, 602
BspT107I	GGYRCC	2 cut(s)	1390, 1508
BsrDI	GCAATG	1 cut(s)	318
BsrI	ACTGG	2 cut(s)	490, 1351
BssECI	CCNNGG	3 cut(s)	704, 722, 965
BssMI	GATC	5 cut(s)	198, 244, 427, 640, 938
BssNI	GRCGYC	1 cut(s)	1391
BssT1I	CCWWGG	2 cut(s)	704, 722
Bst2UI	CCWGG	1 cut(s)	594
Bst4CI	ACNGT	3 cut(s)	290, 347, 851
Bst6I	CTCTTC	3 cut(s)	276, 354, 824
BstACI	GRCGYC	1 cut(s)	1391
BstBAI	YACGTR	1 cut(s)	1535
BstBI	TTCGAA	2 cut(s)	335, 602
BstC8I	GCNNGC	6 cut(s)	100, 119, 373, 560, 580, 1480
BstDEI	CTNAG	5 cut(s)	424, 768, 1137, 1264, 1449
BstF5I	GGATG	5 cut(s)	415, 715, 961, 1357, 1580
BstFNI	CGCG	1 cut(s)	621
BstH2I	RGCGCY	3 cut(s)	58, 93, 1394
BstHHI	GCGC	4 cut(s)	57, 92, 584, 1393
BstKTI	GATC	5 cut(s)	201, 247, 430, 643, 941
BstMAI	GTCTC	2 cut(s)	1005, 1313
BstMBI	GATC	5 cut(s)	198, 244, 427, 640, 938
BstMWI	GCNNNNNNNGC	3 cut(s)	123, 893, 1100
BstNI	CCWGG	1 cut(s)	594
BstNSI	RCATGY	2 cut(s)	375, 1193
BstSCI	CCNGG	3 cut(s)	121, 592, 964
BstSFI	CTRYAG	1 cut(s)	1503
BstUI	CGCG	1 cut(s)	621
BstV1I	GCAGC	3 cut(s)	113, 549, 1462
BstX2I	RGATCY	2 cut(s)	427, 938
BstYI	RGATCY	2 cut(s)	427, 938
BsuI	GTATCC	1 cut(s)	1492
BsuRI	GGCC	4 cut(s)	102, 179, 592, 1056
BtrI	CACGTC	1 cut(s)	1015
BtsCI	GGATG	5 cut(s)	415, 715, 961, 1357, 1580
BtsIMutI	CAGTG	1 cut(s)	194
BtuMI	TCGCGA	1 cut(s)	621
Cac8I	GCNNGC	6 cut(s)	100, 119, 373, 560, 580, 1480
CaiI	CAGNNNCTG	2 cut(s)	401, 506
CfoI	GCGC	4 cut(s)	57, 92, 584, 1393
Cfr13I	GGNCC	3 cut(s)	286, 467, 1055
Csp6I	GTAC	4 cut(s)	483, 1509, 1536, 1553
CspCI	CAANNNNNGTGG	2 cut(s)	996, 1031
CviAII	CATG	5 cut(s)	181, 372, 989, 1190, 1405
CviQI	GTAC	4 cut(s)	483, 1509, 1536, 1553
DdeI	CTNAG	5 cut(s)	424, 768, 1137, 1264, 1449
DinI	GGCGCC	1 cut(s)	1392
DpnI	GATC	5 cut(s)	200, 246, 429, 642, 940
DpnII	GATC	5 cut(s)	198, 244, 427, 640, 938
DrdI	GACNNNNNNGTC	1 cut(s)	1169
DseDI	GACNNNNNNGTC	1 cut(s)	1169
EaeI	YGGCCR	2 cut(s)	177, 590
Eam1104I	CTCTTC	3 cut(s)	276, 354, 824
EarI	CTCTTC	3 cut(s)	276, 354, 824
EciI	GGCGGA	1 cut(s)	1309
Ecl136II	GAGCTC	1 cut(s)	1546
Eco130I	CCWWGG	2 cut(s)	704, 722
Eco24I	GRGCYC	1 cut(s)	1548
Eco47I	GGWCC	2 cut(s)	286, 467
Eco53kI	GAGCTC	1 cut(s)	1546
Eco57I	CTGAAG	1 cut(s)	378
EcoICRI	GAGCTC	1 cut(s)	1546
EcoRII	CCWGG	1 cut(s)	592
EcoT14I	CCWWGG	2 cut(s)	704, 722
EcoT22I	ATGCAT	1 cut(s)	377
EcoT38I	GRGCYC	1 cut(s)	1548
EgeI	GGCGCC	1 cut(s)	1392
EheI	GGCGCC	1 cut(s)	1392
ErhI	CCWWGG	2 cut(s)	704, 722
Esp3I	CGTCTC	1 cut(s)	1005
FaeI	CATG	5 cut(s)	184, 375, 992, 1193, 1408
FalI	AAGNNNNNCTT	2 cut(s)	315, 347
FaqI	GGGAC	1 cut(s)	241
FatI	CATG	5 cut(s)	180, 371, 988, 1189, 1404
FauI	CCCGC	1 cut(s)	32
FauNDI	CATATG	1 cut(s)	946
FbaI	TGATCA	1 cut(s)	244
Fnu4HI	GCNGC	3 cut(s)	127, 563, 1476
FokI	GGATG	5 cut(s)	402, 722, 948, 1364, 1567
FriOI	GRGCYC	1 cut(s)	1548
Fsp4HI	GCNGC	3 cut(s)	127, 563, 1476
FspBI	CTAG	1 cut(s)	1585
FspI	TGCGCA	1 cut(s)	583
GlaI	GCGC	4 cut(s)	56, 91, 583, 1392
GluI	GCNGC	3 cut(s)	127, 563, 1476
GsaI	CCCAGC	2 cut(s)	368, 675
HaeII	RGCGCY	3 cut(s)	58, 93, 1394
HaeIII	GGCC	4 cut(s)	102, 179, 592, 1056
HapII	CCGG	2 cut(s)	123, 965
HhaI	GCGC	4 cut(s)	57, 92, 584, 1393
Hin1I	GRCGYC	1 cut(s)	1391
Hin1II	CATG	5 cut(s)	184, 375, 992, 1193, 1408
Hin6I	GCGC	4 cut(s)	55, 90, 582, 1391
HinP1I	GCGC	4 cut(s)	55, 90, 582, 1391
HindIII	AAGCTT	2 cut(s)	275, 1092
HinfI	GANTC	2 cut(s)	1145, 1574
HpaII	CCGG	2 cut(s)	123, 965
HphI	GGTGA	3 cut(s)	650, 764, 1225
Hpy166II	GTNNAC	4 cut(s)	194, 613, 1162, 1553
Hpy188I	TCNGA	5 cut(s)	304, 427, 696, 1003, 1425
Hpy188III	TCNNGA	5 cut(s)	47, 79, 135, 379, 620
Hpy8I	GTNNAC	4 cut(s)	194, 613, 1162, 1553
HpyAV	CCTTC	5 cut(s)	81, 949, 1093, 1287, 1333
HpyCH4III	ACNGT	3 cut(s)	290, 347, 851
HpyCH4IV	ACGT	3 cut(s)	1014, 1525, 1534
HpyF10VI	GCNNNNNNNGC	3 cut(s)	123, 893, 1100
HpyF3I	CTNAG	5 cut(s)	424, 768, 1137, 1264, 1449
HpySE526I	ACGT	3 cut(s)	1014, 1525, 1534
Hsp92I	GRCGYC	1 cut(s)	1391
Hsp92II	CATG	5 cut(s)	184, 375, 992, 1193, 1408
HspAI	GCGC	4 cut(s)	55, 90, 582, 1391
KasI	GGCGCC	1 cut(s)	1390
KpnI	GGTACC	1 cut(s)	1512
Ksp22I	TGATCA	1 cut(s)	244
Kzo9I	GATC	5 cut(s)	198, 244, 427, 640, 938
LguI	GCTCTTC	1 cut(s)	354
LmnI	GCTCC	2 cut(s)	26, 316
Lsp1109I	GCAGC	3 cut(s)	113, 549, 1462
LweI	GCATC	3 cut(s)	168, 181, 384
MaeI	CTAG	1 cut(s)	1585
MaeII	ACGT	3 cut(s)	1014, 1525, 1534
MaeIII	GTNAC	2 cut(s)	290, 1213
MalI	GATC	5 cut(s)	200, 246, 429, 642, 940
MboI	GATC	5 cut(s)	198, 244, 427, 640, 938
MboII	GAAGA	8 cut(s)	150, 232, 293, 371, 811, 1081, 1124, 1127
MfeI	CAATTG	2 cut(s)	462, 1358
MflI	RGATCY	2 cut(s)	427, 938
MhlI	GDGCHC	3 cut(s)	34, 633, 1548
MlsI	TGGCCA	2 cut(s)	179, 592
MluNI	TGGCCA	2 cut(s)	179, 592
Mly113I	GGCGCC	1 cut(s)	1391
MlyI	GAGTC	1 cut(s)	1139
MmeI	TCCRAC	1 cut(s)	666
Mox20I	TGGCCA	2 cut(s)	179, 592
Mph1103I	ATGCAT	1 cut(s)	377
MscI	TGGCCA	2 cut(s)	179, 592
MseI	TTAA	6 cut(s)	210, 740, 1200, 1230, 1377, 1398
MslI	CAYNNNNRTG	1 cut(s)	521
Msp20I	TGGCCA	2 cut(s)	179, 592
MspA1I	CMGCKG	1 cut(s)	356
MspI	CCGG	2 cut(s)	123, 965
MspR9I	CCNGG	3 cut(s)	123, 594, 966
MunI	CAATTG	2 cut(s)	462, 1358
Mva1269I	GAATGC	2 cut(s)	763, 1318
MvaI	CCWGG	1 cut(s)	594
MvnI	CGCG	1 cut(s)	621
MwoI	GCNNNNNNNGC	3 cut(s)	123, 893, 1100
NarI	GGCGCC	1 cut(s)	1391
NciI	CCSGG	2 cut(s)	123, 966
NdeI	CATATG	1 cut(s)	946
NdeII	GATC	5 cut(s)	198, 244, 427, 640, 938
NlaIII	CATG	5 cut(s)	184, 375, 992, 1193, 1408
NlaIV	GGNNCC	3 cut(s)	1392, 1427, 1510
NmuCI	GTSAC	2 cut(s)	290, 1213
NruI	TCGCGA	1 cut(s)	621
NsbI	TGCGCA	1 cut(s)	583
NsiI	ATGCAT	1 cut(s)	377
NspI	RCATGY	2 cut(s)	375, 1193
NspV	TTCGAA	2 cut(s)	335, 602
PaeI	GCATGC	1 cut(s)	375
PciI	ACATGT	1 cut(s)	1189
PciSI	GCTCTTC	1 cut(s)	354
PcsI	WCGNNNNNNNCGW	1 cut(s)	1531
PctI	GAATGC	2 cut(s)	763, 1318
PfeI	GAWTC	1 cut(s)	1574
PkrI	GCNGC	3 cut(s)	128, 564, 1477
PleI	GAGTC	1 cut(s)	1139
PluTI	GGCGCC	1 cut(s)	1394
PpsI	GAGTC	1 cut(s)	1139
Ppu21I	YACGTR	1 cut(s)	1535
PscI	ACATGT	1 cut(s)	1189
PshBI	ATTAAT	1 cut(s)	740
Psp124BI	GAGCTC	1 cut(s)	1548
Psp1406I	AACGTT	1 cut(s)	1525
Psp6I	CCWGG	1 cut(s)	592
PspFI	CCCAGC	2 cut(s)	364, 671
PspGI	CCWGG	1 cut(s)	592
PspN4I	GGNNCC	3 cut(s)	1392, 1427, 1510
PspPI	GGNCC	3 cut(s)	286, 467, 1055
PstNI	CAGNNNCTG	2 cut(s)	401, 506
PsuI	RGATCY	2 cut(s)	427, 938
PvuII	CAGCTG	1 cut(s)	356
RruI	TCGCGA	1 cut(s)	621
RsaI	GTAC	4 cut(s)	484, 1510, 1537, 1554
RsaNI	GTAC	4 cut(s)	483, 1509, 1536, 1553
RseI	CAYNNNNRTG	1 cut(s)	521
SacI	GAGCTC	1 cut(s)	1548
SapI	GCTCTTC	1 cut(s)	354
SaqAI	TTAA	6 cut(s)	210, 740, 1200, 1230, 1377, 1398
SatI	GCNGC	3 cut(s)	127, 563, 1476
Sau3AI	GATC	5 cut(s)	198, 244, 427, 640, 938
Sau96I	GGNCC	3 cut(s)	286, 467, 1055
ScaI	AGTACT	1 cut(s)	484
SchI	GAGTC	1 cut(s)	1139
ScrFI	CCNGG	3 cut(s)	123, 594, 966
SduI	GDGCHC	3 cut(s)	34, 633, 1548
SfaNI	GCATC	3 cut(s)	168, 181, 384
SfcI	CTRYAG	1 cut(s)	1503
SfoI	GGCGCC	1 cut(s)	1392
SfuI	TTCGAA	2 cut(s)	335, 602
SinI	GGWCC	2 cut(s)	286, 467
SmiMI	CAYNNNNRTG	1 cut(s)	521
SmlI	CTYRAG	1 cut(s)	254
SmoI	CTYRAG	1 cut(s)	254
SphI	GCATGC	1 cut(s)	375
SsiI	CCGC	3 cut(s)	25, 758, 1294
SspDI	GGCGCC	1 cut(s)	1390
SspMI	CTAG	1 cut(s)	1585
SstI	GAGCTC	1 cut(s)	1548
StyD4I	CCNGG	3 cut(s)	121, 592, 964
StyI	CCWWGG	2 cut(s)	704, 722
TaaI	ACNGT	3 cut(s)	290, 347, 851
TaiI	ACGT	3 cut(s)	1017, 1528, 1537
TaqI	TCGA	5 cut(s)	335, 479, 602, 1272, 1514
TatI	WGTACW	1 cut(s)	482
TfiI	GAWTC	1 cut(s)	1574
Tru1I	TTAA	6 cut(s)	210, 740, 1200, 1230, 1377, 1398
Tru9I	TTAA	6 cut(s)	210, 740, 1200, 1230, 1377, 1398
TscAI	CASTG	1 cut(s)	201
TseFI	GTSAC	2 cut(s)	290, 1213
TseI	GCWGC	3 cut(s)	126, 562, 1475
Tsp45I	GTSAC	2 cut(s)	290, 1213
TspDTI	ATGAA	8 cut(s)	726, 790, 798, 1005, 1121, 1125, 1269, 1368
TspGWI	ACGGA	1 cut(s)	459
TspRI	CASTG	1 cut(s)	201
VpaK11BI	GGWCC	2 cut(s)	286, 467
VspI	ATTAAT	1 cut(s)	740
XapI	RAATTY	4 cut(s)	526, 665, 1119, 1253
XceI	RCATGY	2 cut(s)	375, 1193
XspI	CTAG	1 cut(s)	1585
ZrmI	AGTACT	1 cut(s)	484
Zsp2I	ATGCAT	1 cut(s)	377

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.