Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr1A

Orthogroup ID

OG0001310

Physical Location & Seq

Genomic Coordinates Reverse (-)

53473162 .. 53475054

Gene Structure 1893 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh1AG302800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1770 bp

ATGAGTAATAATAATACAGAAAGCTCCCGCAGTGCTCTGGCCAACACTCTTGAACGGCGATTCTTTTACATCCCTTCTTTCAAGATCTACGGCGCCGTTGCTGGCCTCTACGACTATGGCTCGCCTGGCTGCAAACTCAAGAAGAATGTCCTTTCGCTTTGGCATCAGCACTTTGTTCATGAAGAGAACATGTGGGAGATTGACTGCCCTTGTCTCACGCCAGAAGCTGTCTTGAAGGCATCTGGCCATGTAGATAAGTTCACTGATCTCATGGTTAAGGATGAGAAGAAAGGGACTTGCTACCGGGCTGATCACTTGCTCAAGGATTTCTGCAATAACAAGCTTGAAGATCAGGACCGTCGCATTAGTCCAGAGATGGCAATGGAGCTGAAACAAGTGCTTTCTAAATTGGATGGTCTATCAGCTGAAGAGCTGGGTGCATGCATCAAGAAATATGGGATTAGAGCCCCCGAAACAGATAATTATCTCTCAGATCCTTATCCTTTCAACTTGATGTTTCAAACATCAATTGGTCCGTCTGGTTCCAGCACTGGTTTCTTTCGCCCAGAAACTGCACAAGGCATATTTGTGAATTTTGTGGACATTTACTATGACAATGGGTGCAAGCTGCCTTTTGCCGTTGCTCAAGTTGGCCAGGCTTTTCGAAACGAGATATCTCCTCGCCAAGGCCTGTTGAGAGTCCGCGAGTTCACACTCGCGGAAATTGAGCACTTTGTTGATCCTGAAGACAAATCTCACGTCAAATTCCCCACCGTCGACAAGTTGCAACTTCCTATGTTCCCAAGGGATGAACAAAAGCCCGGCCAATCTGCAAGATTAATCTCTCTGGGGGAAGCAGTGCATTCTAAGATTGTGGAGAATGAAACTCTTGGCTACTTCATTGGGAGAGTATATCTCTTCCTCACTCGTCTAGGTATAGACAAGAACCGTATAAGGTTCAGGCAACACCTTGCTAAAGAGATGGCTCACTATGCTGCTGACTGCTGGGATGCTGAGATTGAGACTTCCTATGGCTGGATTGAGTGCGTCGAGATTGGCCCTGCTTTCGAGAAGAAGCAAAAGATTGTGCTTGAAGCTTTGGAGGCTATGGATGAAGAAGAAATTTCAAAAATGAAGGCCGAGTTAGACTCCAAGGGGGAGGTGGACTTCTTTGTCTGCACTCTTGGGGAACATGTATCTATTAAGAGCAGTATGGTGACAATTTCAAAGGTTAAAACAAGAGAACATCAAAGAAAATTCACACCCTCAGTAATCGAGCCTTCATTTGGTATTGGGAGGATTATATATTGTCTCTTTGAGCATTCCTTCTACACCAGACCAGATAAAACAGGGGATGAACAATTGAATGTGTTTCGCTTTAACCCACTTGTGGCGCCTTTTAAGTGCACAGTTTTCCCTCTGATTCGGAACCAACGGTTTGAGGATGTTGCCAAGGACATTTCCAAGTCATTGACTGCTGCTGGCATATCGCATAAAATAGATACTACAGGTACCTCGATTGGGAAACGTTATGCACGTACTGATGAGCTCGGTGTACCCTTTGCAATCACGGTTGATTCTACATCCTCAGTCACAATTCGAGAAAGAGACAGCAAAGATCAAATCCGTGTTAGTGTGAAGACGGCAGTATCTGTTGTGAAGGAGCTCAGTGAGGGGTTGAGGACTTGGGAAGATTTGTGGTGGTCACCTAGACAACGGTGGAAGAGATTCTGGCGTTCCTGCTTTAGATTTATATTGTCTAGAAACTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000959 GO:0003674 GO:0003824 GO:0004812 GO:0004820 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005768 GO:0005794 GO:0005802 GO:0005829 GO:0006082 GO:0006139 GO:0006399 GO:0006412 GO:0006418 GO:0006426 GO:0006518 GO:0006520 GO:0006725 GO:0006753 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009117 GO:0009165 GO:0009987 GO:0010035 GO:0010038 GO:0010467 GO:0012505 GO:0015959 GO:0015960 GO:0015965 GO:0015966 GO:0016070 GO:0016874 GO:0016875 GO:0018130 GO:0019438 GO:0019538 GO:0019637 GO:0019752 GO:0031410 GO:0031982 GO:0031984 GO:0032543 GO:0034641 GO:0034645 GO:0034654 GO:0034660 GO:0042221 GO:0043038 GO:0043039 GO:0043043 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0043603 GO:0043604 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044281 GO:0044422 GO:0044424 GO:0044431 GO:0044444 GO:0044446 GO:0044464 GO:0046483 GO:0046686 GO:0046983 GO:0050896 GO:0055086 GO:0070127 GO:0070150 GO:0071704 GO:0090304 GO:0090407 GO:0097708 GO:0098791 GO:0140053 GO:0140098 GO:0140101 GO:1901293 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00970 map00970

Pfam Domains

Protein Families

HGTP_anticodon WHEP-TRS tRNA-synt_2b

Protein Analysis

589

Amino Acids

67.44

Weight (kDa)

7.2

Isoelectric Point (pI)

42.43

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
tRNA-synt_2b	PF00587	188 - 440	7.8e-08	tRNA synthetase class II core domain (G, H, P, S and T)
HGTP_anticodon	PF03129	468 - 556	2.9e-19	Anticodon binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001310)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G29880
fragaria_vesca	FvH4_4g22441 FvH4_4g22450 FvH4_4g22450 FvH4_4g22610 FvH4_4g22610
malus_domestica	MD13G1131000.v1.1 MD13G1145800.v1.1 MD16G1141200.v1.1
prunus_persica	Prupe.1G214600_v2.0.a1
pyrus_communis	pycom13g11430 pycom13g12530 pycom16g11160 pycom16g11170
rosa_chinensis	RchiOBHm_Chr1g0361881 RchiOBHm_Chr4g0428711 RchiOBHm_Chr4g0428851
rosa_laevigata	RLG00000007120 RLG00000007133 RLG00000027689 RLG00000027690 RLG00000027694
rosa_multiflora	Rmu_co8208336.1_g000001 Rmu_co8210234.1_g000001 Rmu_sc0003316.1_g000006 Rmu_sc0008612.1_g000003 Rmu_sc0018216.1_g000001 Rmu_ssc0000124.1_g000013
rosa_roxburghii	Rroxscaffold_4G00294630 Rroxscaffold_5G00370530
rosa_rugosa	Rorug01G0292100 Rorug04G0227400 Rorug04G0227500 Rorug04G0229700
rosa_samantha	Rh1AG302800 Rh1BG265900 Rh1BG266000 Rh1CG284000 Rh1DG295900 Rh1DG296000 Rh4AG284700 Rh4AG284900 Rh4AG286400 Rh4BG290700 Rh4BG290900 Rh4BG292200 Rh4CG308200 Rh4DG288200 Rh4DG289400
rosa_wichuraiana	Rw0G020620 Rw1G026830 Rw4G024720 Rw4G024830 Rw7G040280

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1172
Acc65I	GGTACC	1 cut(s)	1511
AccB1I	GGYRCC	3 cut(s)	92, 1393, 1511
AccI	GTMKAC	1 cut(s)	777
AccII	CGCG	2 cut(s)	705, 719
AciI	CCGC	3 cut(s)	28, 703, 719
AclI	AACGTT	1 cut(s)	1528
AclWI	GGATC	2 cut(s)	488, 734
AcoI	YGGCCR	4 cut(s)	39, 244, 652, 823
AcsI	RAATTY	4 cut(s)	592, 764, 1122, 1256
AcuI	CTGAAG	2 cut(s)	447, 765
AcyI	GRCGYC	2 cut(s)	93, 1394
AfaI	GTAC	3 cut(s)	1513, 1540, 1557
AfiI	CCNNNNNNNGG	5 cut(s)	686, 1035, 1286, 1390, 1521
AflIII	ACRYGT	2 cut(s)	189, 1192
AjiI	CACGTC	1 cut(s)	760
AjnI	CCWGG	2 cut(s)	124, 654
Alw21I	GWGCWC	5 cut(s)	37, 732, 1409, 1551, 1668
Alw26I	GTCTC	4 cut(s)	218, 1016, 1316, 1602
Alw44I	GTGCAC	1 cut(s)	1405
AlwI	GGATC	2 cut(s)	488, 734
AlwNI	CAGNNNCTG	3 cut(s)	227, 572, 1652
AoxI	GGCC	8 cut(s)	39, 103, 244, 652, 688, 823, 1057, 1137
ApaLI	GTGCAC	1 cut(s)	1405
ApeKI	GCWGC	4 cut(s)	129, 628, 995, 1478
ApoI	RAATTY	4 cut(s)	592, 764, 1122, 1256
ArsI	GACNNNNNNTTYG	2 cut(s)	744, 776
AseI	ATTAAT	1 cut(s)	839
Asp700I	GAANNNNTTC	1 cut(s)	1727
Asp718I	GGTACC	1 cut(s)	1511
AspLEI	GCGC	2 cut(s)	95, 1396
AspS9I	GGNCC	3 cut(s)	355, 533, 1058
AsuC2I	CCSGG	2 cut(s)	305, 822
AsuHPI	GGTGA	2 cut(s)	1228, 1698
AsuII	TTCGAA	1 cut(s)	664
AvaII	GGWCC	2 cut(s)	355, 533
BaeGI	GKGCMC	1 cut(s)	1409
BaeI	ACNNNNGTAYC	2 cut(s)	1632, 1665
BalI	TGGCCA	3 cut(s)	41, 246, 654
BanI	GGYRCC	3 cut(s)	92, 1393, 1511
BanII	GRGCYC	3 cut(s)	469, 1551, 1668
BbsI	GAAGAC	2 cut(s)	753, 1646
Bbv12I	GWGCWC	5 cut(s)	37, 732, 1409, 1551, 1668
BbvI	GCAGC	4 cut(s)	116, 615, 982, 1465
BccI	CCATC	3 cut(s)	370, 407, 976
BceAI	ACGGC	5 cut(s)	71, 80, 106, 623, 1659
BciT130I	CCWGG	2 cut(s)	126, 656
BclI	TGATCA	1 cut(s)	310
BcnI	CCSGG	2 cut(s)	305, 822
BcoDI	GTCTC	4 cut(s)	218, 1016, 1316, 1602
BfaI	CTAG	3 cut(s)	932, 1710, 1761
BfmI	CTRYAG	1 cut(s)	1506
BfoI	RGCGCY	2 cut(s)	96, 1397
BglII	AGATCT	1 cut(s)	84
BisI	GCNGC	4 cut(s)	130, 629, 996, 1479
BlsI	GCNGC	4 cut(s)	131, 630, 997, 1480
Bme1390I	CCNGG	4 cut(s)	126, 305, 656, 822
Bme18I	GGWCC	2 cut(s)	355, 533
BmgBI	CACGTC	1 cut(s)	760
BmgT120I	GGNCC	3 cut(s)	355, 533, 1058
BmiI	GGNNCC	5 cut(s)	94, 544, 1395, 1430, 1513
BmrFI	CCNGG	4 cut(s)	126, 305, 656, 822
BmsI	GCATC	4 cut(s)	172, 248, 453, 1000
BpiI	GAAGAC	2 cut(s)	753, 1646
BplI	GAGNNNNNCTC	4 cut(s)	900, 932, 1133, 1165
Bpu14I	TTCGAA	1 cut(s)	664
BpuEI	CTTGAG	3 cut(s)	122, 305, 630
BpuMI	CCSGG	2 cut(s)	305, 822
BsaAI	YACGTR	1 cut(s)	1538
BsaBI	GATNNNNATC	2 cut(s)	483, 498
BsaHI	GRCGYC	2 cut(s)	93, 1394
BsaJI	CCNNGG	4 cut(s)	685, 803, 1152, 1452
Bsc4I	CCNNNNNNNGG	5 cut(s)	686, 1035, 1286, 1390, 1521
Bse1I	ACTGG	1 cut(s)	556
Bse3DI	GCAATG	1 cut(s)	387
Bse8I	GATNNNNATC	2 cut(s)	483, 498
BseBI	CCWGG	2 cut(s)	126, 656
BseDI	CCNNGG	4 cut(s)	685, 803, 1152, 1452
BseGI	GGATG	9 cut(s)	69, 286, 418, 814, 1015, 1117, 1360, 1450, 1583
BseJI	GATNNNNATC	2 cut(s)	483, 498
BseLI	CCNNNNNNNGG	5 cut(s)	686, 1035, 1286, 1390, 1521
BseMI	GCAATG	1 cut(s)	387
BseMII	CTCAG	5 cut(s)	504, 1005, 1281, 1602, 1681
BseNI	ACTGG	1 cut(s)	556
BseRI	GAGGAG	1 cut(s)	669
BseSI	GKGCMC	1 cut(s)	1409
BseXI	GCAGC	4 cut(s)	116, 615, 982, 1465
BseYI	CCCAGC	2 cut(s)	433, 1005
BsgI	GTGCAG	2 cut(s)	558, 1162
Bsh1236I	CGCG	2 cut(s)	705, 719
BshFI	GGCC	8 cut(s)	41, 105, 246, 654, 690, 825, 1059, 1139
BshNI	GGYRCC	3 cut(s)	92, 1393, 1511
BsiHKAI	GWGCWC	5 cut(s)	37, 732, 1409, 1551, 1668
BsiSI	CCGG	2 cut(s)	304, 822
BslFI	GGGAC	1 cut(s)	307
BslI	CCNNNNNNNGG	5 cut(s)	686, 1035, 1286, 1390, 1521
BsmAI	GTCTC	4 cut(s)	218, 1016, 1316, 1602
BsmFI	GGGAC	1 cut(s)	307
BsmI	GAATGC	2 cut(s)	862, 1321
BsnI	GGCC	8 cut(s)	41, 105, 246, 654, 690, 825, 1059, 1139
Bsp119I	TTCGAA	1 cut(s)	664
Bsp1286I	GDGCHC	6 cut(s)	37, 469, 732, 1409, 1551, 1668
Bsp143I	GATC	7 cut(s)	84, 265, 310, 349, 493, 739, 1618
BspACI	CCGC	3 cut(s)	28, 703, 719
BspANI	GGCC	8 cut(s)	41, 105, 246, 654, 690, 825, 1059, 1139
BspCNI	CTCAG	5 cut(s)	503, 1006, 1280, 1601, 1680
BspFNI	CGCG	2 cut(s)	705, 719
BspHI	TCATGA	1 cut(s)	178
BspLI	GGNNCC	5 cut(s)	94, 544, 1395, 1430, 1513
BspPI	GGATC	2 cut(s)	488, 734
BspQI	GCTCTTC	1 cut(s)	423
BspT104I	TTCGAA	1 cut(s)	664
BspT107I	GGYRCC	3 cut(s)	92, 1393, 1511
BsrDI	GCAATG	1 cut(s)	387
BsrI	ACTGG	1 cut(s)	556
BssECI	CCNNGG	4 cut(s)	685, 803, 1152, 1452
BssMI	GATC	7 cut(s)	84, 265, 310, 349, 493, 739, 1618
BssNI	GRCGYC	2 cut(s)	93, 1394
BssT1I	CCWWGG	4 cut(s)	685, 803, 1152, 1452
Bst2UI	CCWGG	2 cut(s)	126, 656
Bst4CI	ACNGT	7 cut(s)	359, 775, 950, 1411, 1437, 1573, 1719
Bst6I	CTCTTC	4 cut(s)	177, 423, 923, 1718
BstACI	GRCGYC	2 cut(s)	93, 1394
BstBAI	YACGTR	1 cut(s)	1538
BstBI	TTCGAA	1 cut(s)	664
BstC8I	GCNNGC	5 cut(s)	103, 122, 442, 626, 1483
BstDEI	CTNAG	6 cut(s)	490, 867, 1014, 1267, 1588, 1667
BstEII	GGTNACC	1 cut(s)	1704
BstENI	CCTNNNNNAGG	1 cut(s)	684
BstF5I	GGATG	9 cut(s)	69, 286, 418, 814, 1015, 1117, 1360, 1450, 1583
BstFNI	CGCG	2 cut(s)	705, 719
BstH2I	RGCGCY	2 cut(s)	96, 1397
BstHHI	GCGC	2 cut(s)	95, 1396
BstKTI	GATC	7 cut(s)	87, 268, 313, 352, 496, 742, 1621
BstMAI	GTCTC	4 cut(s)	218, 1016, 1316, 1602
BstMBI	GATC	7 cut(s)	84, 265, 310, 349, 493, 739, 1618
BstMWI	GCNNNNNNNGC	3 cut(s)	126, 992, 1103
BstNI	CCWGG	2 cut(s)	126, 656
BstNSI	RCATGY	3 cut(s)	193, 444, 1196
BstPI	GGTNACC	1 cut(s)	1704
BstSCI	CCNGG	4 cut(s)	124, 303, 654, 820
BstSFI	CTRYAG	1 cut(s)	1506
BstSLI	GKGCMC	1 cut(s)	1409
BstUI	CGCG	2 cut(s)	705, 719
BstV1I	GCAGC	4 cut(s)	116, 615, 982, 1465
BstV2I	GAAGAC	2 cut(s)	753, 1646
BstX2I	RGATCY	2 cut(s)	84, 493
BstYI	RGATCY	2 cut(s)	84, 493
BsuRI	GGCC	8 cut(s)	41, 105, 246, 654, 690, 825, 1059, 1139
BtrI	CACGTC	1 cut(s)	760
BtsCI	GGATG	9 cut(s)	69, 286, 418, 814, 1015, 1117, 1360, 1450, 1583
BtsI	GCAGTG	2 cut(s)	37, 864
BtsIMutI	CAGTG	5 cut(s)	37, 261, 549, 864, 1675
Cac8I	GCNNGC	5 cut(s)	103, 122, 442, 626, 1483
CaiI	CAGNNNCTG	3 cut(s)	227, 572, 1652
CciI	TCATGA	1 cut(s)	178
CfoI	GCGC	2 cut(s)	95, 1396
Cfr13I	GGNCC	3 cut(s)	355, 533, 1058
CseI	GACGC	1 cut(s)	1036
Csp6I	GTAC	3 cut(s)	1512, 1539, 1556
CviAII	CATG	6 cut(s)	179, 190, 248, 271, 441, 1193
CviQI	GTAC	3 cut(s)	1512, 1539, 1556
DdeI	CTNAG	6 cut(s)	490, 867, 1014, 1267, 1588, 1667
DinI	GGCGCC	2 cut(s)	94, 1395
DpnI	GATC	7 cut(s)	86, 267, 312, 351, 495, 741, 1620
DpnII	GATC	7 cut(s)	84, 265, 310, 349, 493, 739, 1618
DrdI	GACNNNNNNGTC	1 cut(s)	1172
DseDI	GACNNNNNNGTC	1 cut(s)	1172
EaeI	YGGCCR	4 cut(s)	39, 244, 652, 823
Eam1104I	CTCTTC	4 cut(s)	177, 423, 923, 1718
EarI	CTCTTC	4 cut(s)	177, 423, 923, 1718
Ecl136II	GAGCTC	2 cut(s)	1549, 1666
Eco130I	CCWWGG	4 cut(s)	685, 803, 1152, 1452
Eco147I	AGGCCT	1 cut(s)	690
Eco24I	GRGCYC	3 cut(s)	469, 1551, 1668
Eco32I	GATATC	1 cut(s)	675
Eco47I	GGWCC	2 cut(s)	355, 533
Eco53kI	GAGCTC	2 cut(s)	1549, 1666
Eco57I	CTGAAG	2 cut(s)	447, 765
Eco91I	GGTNACC	1 cut(s)	1704
EcoICRI	GAGCTC	2 cut(s)	1549, 1666
EcoNI	CCTNNNNNAGG	1 cut(s)	684
EcoO65I	GGTNACC	1 cut(s)	1704
EcoRII	CCWGG	2 cut(s)	124, 654
EcoRV	GATATC	1 cut(s)	675
EcoT14I	CCWWGG	4 cut(s)	685, 803, 1152, 1452
EcoT22I	ATGCAT	1 cut(s)	446
EcoT38I	GRGCYC	3 cut(s)	469, 1551, 1668
EgeI	GGCGCC	2 cut(s)	94, 1395
EheI	GGCGCC	2 cut(s)	94, 1395
ErhI	CCWWGG	4 cut(s)	685, 803, 1152, 1452
FaeI	CATG	6 cut(s)	182, 193, 251, 274, 444, 1196
FaqI	GGGAC	1 cut(s)	307
FatI	CATG	6 cut(s)	178, 189, 247, 270, 440, 1192
FauI	CCCGC	1 cut(s)	35
FbaI	TGATCA	1 cut(s)	310
FblI	GTMKAC	1 cut(s)	777
Fnu4HI	GCNGC	4 cut(s)	130, 629, 996, 1479
FokI	GGATG	9 cut(s)	56, 293, 425, 821, 1022, 1124, 1367, 1457, 1570
FriOI	GRGCYC	3 cut(s)	469, 1551, 1668
Fsp4HI	GCNGC	4 cut(s)	130, 629, 996, 1479
FspBI	CTAG	3 cut(s)	932, 1710, 1761
GlaI	GCGC	2 cut(s)	94, 1395
GluI	GCNGC	4 cut(s)	130, 629, 996, 1479
GsaI	CCCAGC	2 cut(s)	437, 1009
HaeII	RGCGCY	2 cut(s)	96, 1397
HaeIII	GGCC	8 cut(s)	41, 105, 246, 654, 690, 825, 1059, 1139
HapII	CCGG	2 cut(s)	304, 822
HgaI	GACGC	1 cut(s)	1036
HhaI	GCGC	2 cut(s)	95, 1396
Hin1I	GRCGYC	2 cut(s)	93, 1394
Hin1II	CATG	6 cut(s)	182, 193, 251, 274, 444, 1196
Hin6I	GCGC	2 cut(s)	93, 1394
HinP1I	GCGC	2 cut(s)	93, 1394
HincII	GTYRAC	1 cut(s)	778
HindII	GTYRAC	1 cut(s)	778
HindIII	AAGCTT	2 cut(s)	341, 1095
HinfI	GANTC	6 cut(s)	60, 699, 1148, 1423, 1577, 1728
HpaII	CCGG	2 cut(s)	304, 822
HphI	GGTGA	2 cut(s)	1228, 1698
Hpy166II	GTNNAC	7 cut(s)	261, 601, 711, 778, 1165, 1407, 1556
Hpy188I	TCNGA	3 cut(s)	493, 1422, 1428
Hpy8I	GTNNAC	7 cut(s)	261, 601, 711, 778, 1165, 1407, 1556
Hpy99I	CGWCG	3 cut(s)	363, 779, 1052
HpyAV	CCTTC	6 cut(s)	84, 229, 1129, 1290, 1336, 1654
HpyCH4III	ACNGT	7 cut(s)	359, 775, 950, 1411, 1437, 1573, 1719
HpyCH4IV	ACGT	3 cut(s)	759, 1528, 1537
HpyF10VI	GCNNNNNNNGC	3 cut(s)	126, 992, 1103
HpyF3I	CTNAG	6 cut(s)	490, 867, 1014, 1267, 1588, 1667
HpySE526I	ACGT	3 cut(s)	759, 1528, 1537
Hsp92I	GRCGYC	2 cut(s)	93, 1394
Hsp92II	CATG	6 cut(s)	182, 193, 251, 274, 444, 1196
HspAI	GCGC	2 cut(s)	93, 1394
KasI	GGCGCC	2 cut(s)	92, 1393
KpnI	GGTACC	1 cut(s)	1515
Ksp22I	TGATCA	1 cut(s)	310
Kzo9I	GATC	7 cut(s)	84, 265, 310, 349, 493, 739, 1618
LguI	GCTCTTC	1 cut(s)	423
LmnI	GCTCC	3 cut(s)	29, 385, 1663
Lsp1109I	GCAGC	4 cut(s)	116, 615, 982, 1465
LweI	GCATC	4 cut(s)	172, 248, 453, 1000
MaeI	CTAG	3 cut(s)	932, 1710, 1761
MaeII	ACGT	3 cut(s)	759, 1528, 1537
MaeIII	GTNAC	3 cut(s)	1216, 1591, 1704
MalI	GATC	7 cut(s)	86, 267, 312, 351, 495, 741, 1620
MboI	GATC	7 cut(s)	84, 265, 310, 349, 493, 739, 1618
MfeI	CAATTG	2 cut(s)	528, 1361
MflI	RGATCY	2 cut(s)	84, 493
MhlI	GDGCHC	6 cut(s)	37, 469, 732, 1409, 1551, 1668
MlsI	TGGCCA	3 cut(s)	41, 246, 654
MluNI	TGGCCA	3 cut(s)	41, 246, 654
Mly113I	GGCGCC	2 cut(s)	93, 1394
MlyI	GAGTC	2 cut(s)	708, 1142
Mox20I	TGGCCA	3 cut(s)	41, 246, 654
Mph1103I	ATGCAT	1 cut(s)	446
MroXI	GAANNNNTTC	1 cut(s)	1727
MscI	TGGCCA	3 cut(s)	41, 246, 654
MseI	TTAA	6 cut(s)	276, 839, 1203, 1233, 1380, 1401
MslI	CAYNNNNRTG	1 cut(s)	587
Msp20I	TGGCCA	3 cut(s)	41, 246, 654
MspA1I	CMGCKG	1 cut(s)	425
MspI	CCGG	2 cut(s)	304, 822
MspR9I	CCNGG	4 cut(s)	126, 305, 656, 822
MunI	CAATTG	2 cut(s)	528, 1361
Mva1269I	GAATGC	2 cut(s)	862, 1321
MvaI	CCWGG	2 cut(s)	126, 656
MvnI	CGCG	2 cut(s)	705, 719
MwoI	GCNNNNNNNGC	3 cut(s)	126, 992, 1103
NarI	GGCGCC	2 cut(s)	93, 1394
NciI	CCSGG	2 cut(s)	305, 822
NdeII	GATC	7 cut(s)	84, 265, 310, 349, 493, 739, 1618
NlaIII	CATG	6 cut(s)	182, 193, 251, 274, 444, 1196
NlaIV	GGNNCC	5 cut(s)	94, 544, 1395, 1430, 1513
NmeAIII	GCCGAG	1 cut(s)	1165
NmuCI	GTSAC	3 cut(s)	1216, 1591, 1704
NsiI	ATGCAT	1 cut(s)	446
NspI	RCATGY	3 cut(s)	193, 444, 1196
NspV	TTCGAA	1 cut(s)	664
PaeI	GCATGC	1 cut(s)	444
PagI	TCATGA	1 cut(s)	178
PceI	AGGCCT	1 cut(s)	690
PciI	ACATGT	2 cut(s)	189, 1192
PciSI	GCTCTTC	1 cut(s)	423
PcsI	WCGNNNNNNNCGW	1 cut(s)	1534
PctI	GAATGC	2 cut(s)	862, 1321
PdmI	GAANNNNTTC	1 cut(s)	1727
PfeI	GAWTC	4 cut(s)	60, 1423, 1577, 1728
PkrI	GCNGC	4 cut(s)	131, 630, 997, 1480
PleI	GAGTC	2 cut(s)	707, 1142
PluTI	GGCGCC	2 cut(s)	96, 1397
PpsI	GAGTC	2 cut(s)	707, 1142
Ppu21I	YACGTR	1 cut(s)	1538
PscI	ACATGT	2 cut(s)	189, 1192
PshBI	ATTAAT	1 cut(s)	839
Psp124BI	GAGCTC	2 cut(s)	1551, 1668
Psp1406I	AACGTT	1 cut(s)	1528
Psp6I	CCWGG	2 cut(s)	124, 654
PspEI	GGTNACC	1 cut(s)	1704
PspFI	CCCAGC	2 cut(s)	433, 1005
PspGI	CCWGG	2 cut(s)	124, 654
PspN4I	GGNNCC	5 cut(s)	94, 544, 1395, 1430, 1513
PspPI	GGNCC	3 cut(s)	355, 533, 1058
PstNI	CAGNNNCTG	3 cut(s)	227, 572, 1652
PsuI	RGATCY	2 cut(s)	84, 493
PvuII	CAGCTG	1 cut(s)	425
RsaI	GTAC	3 cut(s)	1513, 1540, 1557
RsaNI	GTAC	3 cut(s)	1512, 1539, 1556
RseI	CAYNNNNRTG	1 cut(s)	587
SacI	GAGCTC	2 cut(s)	1551, 1668
SalI	GTCGAC	1 cut(s)	776
SapI	GCTCTTC	1 cut(s)	423
SaqAI	TTAA	6 cut(s)	276, 839, 1203, 1233, 1380, 1401
SatI	GCNGC	4 cut(s)	130, 629, 996, 1479
Sau3AI	GATC	7 cut(s)	84, 265, 310, 349, 493, 739, 1618
Sau96I	GGNCC	3 cut(s)	355, 533, 1058
SchI	GAGTC	2 cut(s)	708, 1142
ScrFI	CCNGG	4 cut(s)	126, 305, 656, 822
SduI	GDGCHC	6 cut(s)	37, 469, 732, 1409, 1551, 1668
SfaNI	GCATC	4 cut(s)	172, 248, 453, 1000
SfcI	CTRYAG	1 cut(s)	1506
SfoI	GGCGCC	2 cut(s)	94, 1395
SfuI	TTCGAA	1 cut(s)	664
SinI	GGWCC	2 cut(s)	355, 533
SmiMI	CAYNNNNRTG	1 cut(s)	587
SmlI	CTYRAG	3 cut(s)	137, 320, 645
SmoI	CTYRAG	3 cut(s)	137, 320, 645
SphI	GCATGC	1 cut(s)	444
SseBI	AGGCCT	1 cut(s)	690
SsiI	CCGC	3 cut(s)	28, 703, 719
SspDI	GGCGCC	2 cut(s)	92, 1393
SspMI	CTAG	3 cut(s)	932, 1710, 1761
SstI	GAGCTC	2 cut(s)	1551, 1668
StuI	AGGCCT	1 cut(s)	690
StyD4I	CCNGG	4 cut(s)	124, 303, 654, 820
StyI	CCWWGG	4 cut(s)	685, 803, 1152, 1452
TaaI	ACNGT	7 cut(s)	359, 775, 950, 1411, 1437, 1573, 1719
TaiI	ACGT	3 cut(s)	762, 1531, 1540
TaqI	TCGA	7 cut(s)	664, 777, 1050, 1068, 1275, 1517, 1600
TfiI	GAWTC	4 cut(s)	60, 1423, 1577, 1728
Tru1I	TTAA	6 cut(s)	276, 839, 1203, 1233, 1380, 1401
Tru9I	TTAA	6 cut(s)	276, 839, 1203, 1233, 1380, 1401
TscAI	CASTG	5 cut(s)	37, 268, 556, 864, 1675
TseFI	GTSAC	3 cut(s)	1216, 1591, 1704
TseI	GCWGC	4 cut(s)	129, 628, 995, 1478
Tsp45I	GTSAC	3 cut(s)	1216, 1591, 1704
TspDTI	ATGAA	9 cut(s)	167, 195, 825, 889, 897, 1128, 1148, 1272, 1371
TspGWI	ACGGA	2 cut(s)	525, 1616
TspRI	CASTG	5 cut(s)	37, 268, 556, 864, 1675
VneI	GTGCAC	1 cut(s)	1405
VpaK11BI	GGWCC	2 cut(s)	355, 533
VspI	ATTAAT	1 cut(s)	839
XagI	CCTNNNNNAGG	1 cut(s)	684
XapI	RAATTY	4 cut(s)	592, 764, 1122, 1256
XbaI	TCTAGA	1 cut(s)	1760
XceI	RCATGY	3 cut(s)	193, 444, 1196
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1159
XmiI	GTMKAC	1 cut(s)	777
XmnI	GAANNNNTTC	1 cut(s)	1727
XspI	CTAG	3 cut(s)	932, 1710, 1761
Zsp2I	ATGCAT	1 cut(s)	446

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.