Rmu_sc0004487.1_g000020

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0004487.1
OG0002394
Physical Location & Seq
Forward (+)
83726 .. 90366
6641 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 3360 bp
atggattatctgggcaattgtgaagtttcagccaaagaaatggaggtccagagaggtttagttgaagcctttgaagaggagttcagtaaatctagaacagcgtcacatgacaatgtgatctcatcagtaaaagaatcatttgatgcttatacggatgcagttcctaaaactttgctagaaagtgggagaactccgaaacagaaatgttctatgatagatgatcaaactcccttgcgagtagactgggatggattggtttgtagcctggtaaaagaagtaaaggggtctaatttgtctactgctaatgctgcaacaccaatgaagttggtatcagaagactgtgcagtggattctaatgccctttgtaattctcataaatcaacagatgttgattttgctatggtttctgggcctggttctcatagaatcctagatgcagagattcttgaagttgagaacccttatgctgcttttagggatgagctgaggagtaacttggctcagtcgactgtaaatgcacacatttctccagaatatgtacaaaggagtgccagtgatgacagagaggtaggttgttcagaatcaactgaatgccagattgcagagaactccaaaggaagaagtttttggtattcaatggagggtacatcacctacgcttaaacgaagaaagattgacgataaaagagttcatgacctgtctgcttcagtagccttgagagaagaggttcttcacgctgtcaaaaaagattctatgtgtgcaaacttggaaagagaagaacacagtccaaaggctttacaacaatctcaagggcgttccatttctcaggaggatgatgggaaattaattgtcagtaagagtcctgttgaagaaacacatctaaatgagaatcacatggtagagaggtctgaatctttacccgaggcacagaagaaagagggtggaatgggtttggaaggggtggatagtagtccaaatgctccattcacttttttgcatgaagaaaaagaagcatcagttttctcaagattgatcaagcaggctgctggacatcctctagattctttgcttgaggatgcaggagtagcacttccaactagcattaacattgatagaggaagccaatgcttaaaagaggacccaatttgtcttcatcttcaggatgatttaagagtagaaaatgttgaagattggccttgtgctggaagaaccgtgcttgcaaagagatctgattctggagcgaccagcaacttcaaagaattgtcaggtggtgctccacatgttgaatccttggatttgactagtgcggatgacgcaatgcctgtacttgagaggtttgttataaagacagatgatgaaccatgttgcattgctgaagagggaattagctttgatgagtggaaccttccaaacactgcattagagcgtgccggtattctggagcagctttgcaaatctgcttgcatgcaaactcccgtagcctattctttagcttcctataagttgcataaagttcaaaatctacagcaatctgttccaactggggttttggagcatgtagatctgaggaccacctttcctataaatgataatgttaagcaattaaaggatggtaatagttcttggagtgaggaagttggcccggccttttatggaagatcctattctgattgcctaccaaattttagtggtcaatctagttgggatattaagaaaccttattcctctcctgttggtaatctttgggatagaattgcttcaagctctagtagttcagggaagcgagtgagctcaattccagagcttgcctgtattagtgaagaaaatgagaatacagatgaggtagctgatacttttcaagatggcattgtttcagaagtgttagattgttctccaaaaaggccaccgcttgcagacattacagaaatccctaaccttcttgcttcagtttctaaagctgcagcctacactgatagatttagtctagattcagtagccaccgaattcagtttaacggggactcataagagcgtcaaaaagaagcctggaatccaaagcagcagtaagagaagatataacaataaggagaaccagagtgtatcacgaaagagagccaccgggtcacttcagaataggttcaccaagccaaagttttctggaaaaaccagtttgagaaaaggaggccctagtttgtcagaggtggagcccaagcgtaacaatattgtttccaatattacttcctttattccacttgtgcaacagaaacaagcagctgcagccttaccagggaagagggacattaaagtgaaggccctggagactgctgaagctgcaaagcgtcttgcagaaaggaaagacaatgaacgtaagatgaagaaagaagctatgaaggttgagcgagcaagagtggagcaagagaatctgaggaagttggagctgcagaggaaaaggaaagaagaggagaggaaaaaaattgaggctgatatagcagcaaagaagagagaaagggaaggggaagacaaaaaggagaagcaaagaaaaaggatgcgtgttgaagaagggcggagggagcagagagaacatgaggacaagttacgtgcagaaaaagtaaagaaagaaataaaatgccaagccagtgatggaagaagatgtgagagtaaggactcaaaatgcaataccgtgcataagaaaatggacaaagaaagggaacatgacactcttaggagcatttcagagactgatcctaggagttcctgtgtttcagcaaataatgccagaagtggaacagctgtccatgaagagaagggcttcagtaattttgagcgtaaggaagaggtacagagcaatttagacaaagccacagaaaatgagaaattggttgtgcagacaagtcgagaacagtcttatgatatctctccatacaaagaatcagatgatgaaaacgacgaagatgacgatagtataccaaataataaatttattccttcatgggcaagcaaaaattgcctggctctggttgcttctcgccagagtagaactgacccagaggtgttcttccctcccaaaagctttccctgtgtagctgaagccacggactgccatcgattaacaaaggtctttagattctcgctggattttgaagagttgagctgttgtgtggtagccattggttcgcaggatgaattgggctacaaatttgtgttggtagggatcagtggttttggtatatcactccatcttaagcactttggtgtcattgaggcgagtctcgctgaggatgtgccacatgcatggctcgaggcactaattgattgggcgccacgtaatcctgctctcgatcaactctatcctagtatgtag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
INCENP_ARK-bind

Protein Analysis

1119

Amino Acids

124.69

Weight (kDa)

5.58

Isoelectric Point (pI)

54.07

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
INCENP_ARK-bind PF03941 977 - 1023 3.3e-06 Inner centromere protein, ARK binding region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1343
AccB1I GGYRCC 1 cut(s) 3316
AccI GTMKAC 4 cut(s) 240, 296, 506, 2962
AciI CCGC 3 cut(s) 1307, 1907, 2563
AclWI GGATC 3 cut(s) 1653, 2735, 3218
AcsI RAATTY 4 cut(s) 1681, 2003, 2975, 3194
AcuI CTGAAG 8 cut(s) 690, 1142, 1395, 1929, 2111, 2346, 2794, 3105
AcyI GRCGYC 1 cut(s) 3317
AfaI GTAC 4 cut(s) 540, 646, 1326, 2838
AfiI CCNNNNNNNGG 3 cut(s) 1202, 2286, 3013
AflII CTTAAG 1 cut(s) 3239
AflIII ACRYGT 1 cut(s) 1279
AhlI ACTAGT 1 cut(s) 1301
AjnI CCWGG 6 cut(s) 264, 412, 2044, 2284, 2313, 3006
AjuI GAANNNNNNNTTGG 2 cut(s) 610, 642
AleI CACNNNNGTG 1 cut(s) 3249
Alw21I GWGCWC 2 cut(s) 1276, 1793
Alw26I GTCTC 3 cut(s) 2312, 2729, 3272
AlwI GGATC 3 cut(s) 1653, 2735, 3218
AlwNI CAGNNNCTG 1 cut(s) 2738
Ama87I CYCGRG 2 cut(s) 920, 3296
AoxI GGCC 7 cut(s) 410, 1193, 1639, 1644, 1901, 2182, 2310
ApoI RAATTY 4 cut(s) 1681, 2003, 2975, 3194
AseI ATTAAT 1 cut(s) 845
Asp700I GAANNNNTTC 4 cut(s) 726, 1756, 2135, 2807
AspA2I CCTAGG 1 cut(s) 2744
AspLEI GCGC 1 cut(s) 3319
AspS9I GGNCC 7 cut(s) 46, 410, 1138, 1569, 1640, 2183, 2311
AsuC2I CCSGG 2 cut(s) 1643, 2119
AsuHPI GGTGA 2 cut(s) 642, 2131
AvaI CYCGRG 2 cut(s) 920, 3296
AvaII GGWCC 3 cut(s) 46, 1138, 1569
AvrII CCTAGG 1 cut(s) 2744
BanI GGYRCC 1 cut(s) 3316
BanII GRGCYC 2 cut(s) 1793, 2208
BbsI GAAGAC 3 cut(s) 342, 1142, 2523
Bbv12I GWGCWC 2 cut(s) 1276, 1793
BbvCI CCTCAGC 2 cut(s) 485, 3273
BccI CCATC 7 cut(s) 242, 830, 1604, 1856, 2633, 3108, 3243
BcgI CGANNNNNNTGC 2 cut(s) 2873, 2907
BciT130I CCWGG 6 cut(s) 266, 414, 2046, 2286, 2315, 3008
BclI TGATCA 2 cut(s) 220, 1032
BcnI CCSGG 2 cut(s) 1643, 2119
BcoDI GTCTC 3 cut(s) 2312, 2729, 3272
BcuI ACTAGT 1 cut(s) 1301
BfmI CTRYAG 4 cut(s) 1523, 1959, 2274, 2438
BfoI RGCGCY 1 cut(s) 3320
BfrI CTTAAG 1 cut(s) 3239
BglII AGATCT 2 cut(s) 1226, 1561
BlnI CCTAGG 1 cut(s) 2744
Bme1390I CCNGG 8 cut(s) 266, 414, 1643, 2046, 2119, 2286, 2315, 3008
Bme18I GGWCC 3 cut(s) 46, 1138, 1569
BmeT110I CYCGRG 2 cut(s) 920, 3296
BmgT120I GGNCC 7 cut(s) 46, 410, 1138, 1569, 1640, 2183, 2311
BmiI GGNNCC 4 cut(s) 1140, 1403, 2205, 3318
BmrFI CCNGG 8 cut(s) 266, 414, 1643, 2046, 2119, 2286, 2315, 3008
BmrI ACTGGG 2 cut(s) 253, 1551
BmsI GCATC 6 cut(s) 133, 145, 424, 1022, 1066, 2535
BmuI ACTGGG 2 cut(s) 253, 1551
BpiI GAAGAC 3 cut(s) 342, 1142, 2523
BpmI CTGGAG 4 cut(s) 513, 1257, 1460, 2336
Bpu10I CCTNAGC 2 cut(s) 485, 3273
BpuEI CTTGAG 5 cut(s) 736, 792, 1009, 1091, 1349
BpuMI CCSGG 2 cut(s) 1643, 2119
Bsa29I ATCGAT 1 cut(s) 3103
BsaAI YACGTR 2 cut(s) 2597, 3323
BsaHI GRCGYC 1 cut(s) 3317
BsaJI CCNNGG 6 cut(s) 921, 1290, 2285, 2313, 2744, 3090
BsaXI ACNNNNNCTCC 4 cut(s) 538, 568, 2740, 2770
Bsc4I CCNNNNNNNGG 3 cut(s) 1202, 2286, 3013
Bse118I RCCGGY 1 cut(s) 1430
Bse1I ACTGG 5 cut(s) 248, 552, 1546, 2166, 2634
Bse3DI GCAATG 2 cut(s) 1323, 1368
BseBI CCWGG 6 cut(s) 266, 414, 2046, 2286, 2315, 3008
BseCI ATCGAT 1 cut(s) 3103
BseDI CCNNGG 6 cut(s) 921, 1290, 2285, 2313, 2744, 3090
BseLI CCNNNNNNNGG 3 cut(s) 1202, 2286, 3013
BseMI GCAATG 2 cut(s) 1323, 1368
BseMII CTCAG 6 cut(s) 476, 515, 839, 1556, 2414, 3264
BseNI ACTGG 5 cut(s) 248, 552, 1546, 2166, 2634
BseRI GAGGAG 3 cut(s) 92, 502, 2474
BsgI GTGCAG 3 cut(s) 363, 2619, 2903
BshFI GGCC 7 cut(s) 412, 1195, 1641, 1646, 1903, 2184, 2312
BshNI GGYRCC 1 cut(s) 3316
BshVI ATCGAT 1 cut(s) 3103
BsiHKAI GWGCWC 2 cut(s) 1276, 1793
BsiHKCI CYCGRG 2 cut(s) 920, 3296
BsiSI CCGG 3 cut(s) 1431, 1643, 2118
BslFI GGGAC 2 cut(s) 2032, 2309
BslI CCNNNNNNNGG 3 cut(s) 1202, 2286, 3013
BsmAI GTCTC 3 cut(s) 2312, 2729, 3272
BsmFI GGGAC 2 cut(s) 2032, 2309
BsmI GAATGC 1 cut(s) 596
BsnI GGCC 7 cut(s) 412, 1195, 1641, 1646, 1903, 2184, 2312
BsoBI CYCGRG 2 cut(s) 920, 3296
Bsp1286I GDGCHC 3 cut(s) 1276, 1793, 2208
Bsp1407I TGTACA 1 cut(s) 538
Bsp143I GATC 9 cut(s) 117, 220, 1032, 1226, 1561, 1658, 2740, 3210, 3337
BspACI CCGC 3 cut(s) 1307, 1907, 2563
BspANI GGCC 7 cut(s) 412, 1195, 1641, 1646, 1903, 2184, 2312
BspCNI CTCAG 6 cut(s) 477, 514, 838, 1557, 2415, 3265
BspDI ATCGAT 1 cut(s) 3103
BspHI TCATGA 1 cut(s) 691
BspLI GGNNCC 4 cut(s) 1140, 1403, 2205, 3318
BspMAI CTGCAG 3 cut(s) 1963, 2278, 2442
BspPI GGATC 3 cut(s) 1653, 2735, 3218
BspT107I GGYRCC 1 cut(s) 3316
BspTI CTTAAG 1 cut(s) 3239
BsrDI GCAATG 2 cut(s) 1323, 1368
BsrFI RCCGGY 1 cut(s) 1430
BsrGI TGTACA 1 cut(s) 538
BsrI ACTGG 5 cut(s) 248, 552, 1546, 2166, 2634
BssAI RCCGGY 1 cut(s) 1430
BssECI CCNNGG 6 cut(s) 921, 1290, 2285, 2313, 2744, 3090
BssMI GATC 9 cut(s) 117, 220, 1032, 1226, 1561, 1658, 2740, 3210, 3337
BssNAI GTATAC 1 cut(s) 2963
BssNI GRCGYC 1 cut(s) 3317
BssT1I CCWWGG 2 cut(s) 1290, 2744
Bst1107I GTATAC 1 cut(s) 2963
Bst2UI CCWGG 6 cut(s) 266, 414, 2046, 2286, 2315, 3008
Bst4CI ACNGT 6 cut(s) 341, 511, 785, 1213, 2680, 2901
Bst6I CTCTTC 9 cut(s) 69, 717, 1371, 2285, 2451, 2492, 2793, 2826, 3135
BstACI GRCGYC 1 cut(s) 3317
BstAFI CTTAAG 1 cut(s) 3239
BstAPI GCANNNNNTGC 2 cut(s) 2771, 3003
BstAUI TGTACA 1 cut(s) 538
BstBAI YACGTR 2 cut(s) 2597, 3323
BstC8I GCNNGC 9 cut(s) 1041, 1218, 1428, 1462, 1466, 1806, 1911, 2400, 2995
BstDEI CTNAG 7 cut(s) 485, 501, 825, 1565, 2423, 2720, 3273
BstDSI CCRYGG 1 cut(s) 3090
BstH2I RGCGCY 1 cut(s) 3320
BstHHI GCGC 1 cut(s) 3319
BstKTI GATC 9 cut(s) 120, 223, 1035, 1229, 1564, 1661, 2743, 3213, 3340
BstMAI GTCTC 3 cut(s) 2312, 2729, 3272
BstMBI GATC 9 cut(s) 117, 220, 1032, 1226, 1561, 1658, 2740, 3210, 3337
BstNI CCWGG 6 cut(s) 266, 414, 2046, 2286, 2315, 3008
BstNSI RCATGY 4 cut(s) 1283, 1468, 1559, 3290
BstSCI CCNGG 8 cut(s) 264, 412, 1641, 2044, 2117, 2284, 2313, 3006
BstSFI CTRYAG 4 cut(s) 1523, 1959, 2274, 2438
BstV2I GAAGAC 3 cut(s) 342, 1142, 2523
BstX2I RGATCY 3 cut(s) 1226, 1561, 1658
BstXI CCANNNNNNTGG 2 cut(s) 40, 3291
BstYI RGATCY 3 cut(s) 1226, 1561, 1658
BstZ17I GTATAC 1 cut(s) 2963
Bsu15I ATCGAT 1 cut(s) 3103
BsuRI GGCC 7 cut(s) 412, 1195, 1641, 1646, 1903, 2184, 2312
BsuTUI ATCGAT 1 cut(s) 3103
BtgI CCRYGG 1 cut(s) 3090
BtsI GCAGTG 2 cut(s) 351, 1413
BtsIMutI CAGTG 6 cut(s) 351, 559, 1413, 1968, 2641, 3220
Cac8I GCNNGC 9 cut(s) 1041, 1218, 1428, 1462, 1466, 1806, 1911, 2400, 2995
CaiI CAGNNNCTG 1 cut(s) 2738
CciI TCATGA 1 cut(s) 691
CfoI GCGC 1 cut(s) 3319
Cfr10I RCCGGY 1 cut(s) 1430
Cfr13I GGNCC 7 cut(s) 46, 410, 1138, 1569, 1640, 2183, 2311
ClaI ATCGAT 1 cut(s) 3103
CseI GACGC 4 cut(s) 90, 1322, 2020, 2327
Csp6I GTAC 4 cut(s) 539, 645, 1325, 2837
CviQI GTAC 4 cut(s) 539, 645, 1325, 2837
DdeI CTNAG 7 cut(s) 485, 501, 825, 1565, 2423, 2720, 3273
DinI GGCGCC 1 cut(s) 3318
DpnI GATC 9 cut(s) 119, 222, 1034, 1228, 1563, 1660, 2742, 3212, 3339
DpnII GATC 9 cut(s) 117, 220, 1032, 1226, 1561, 1658, 2740, 3210, 3337
Eam1104I CTCTTC 9 cut(s) 69, 717, 1371, 2285, 2451, 2492, 2793, 2826, 3135
EarI CTCTTC 9 cut(s) 69, 717, 1371, 2285, 2451, 2492, 2793, 2826, 3135
EciI GGCGGA 1 cut(s) 2578
Ecl136II GAGCTC 1 cut(s) 1791
Eco130I CCWWGG 2 cut(s) 1290, 2744
Eco24I GRGCYC 2 cut(s) 1793, 2208
Eco32I GATATC 1 cut(s) 2911
Eco47I GGWCC 3 cut(s) 46, 1138, 1569
Eco53kI GAGCTC 1 cut(s) 1791
Eco57I CTGAAG 8 cut(s) 690, 1142, 1395, 1929, 2111, 2346, 2794, 3105
Eco88I CYCGRG 2 cut(s) 920, 3296
EcoICRI GAGCTC 1 cut(s) 1791
EcoO109I RGGNCCY 3 cut(s) 1138, 2183, 2311
EcoRI GAATTC 1 cut(s) 2003
EcoRII CCWGG 6 cut(s) 264, 412, 2044, 2284, 2313, 3006
EcoRV GATATC 1 cut(s) 2911
EcoT14I CCWWGG 2 cut(s) 1290, 2744
EcoT22I ATGCAT 1 cut(s) 3292
EcoT38I GRGCYC 2 cut(s) 1793, 2208
EgeI GGCGCC 1 cut(s) 3318
EheI GGCGCC 1 cut(s) 3318
ErhI CCWWGG 2 cut(s) 1290, 2744
FalI AAGNNNNNCTT 2 cut(s) 714, 746
FaqI GGGAC 2 cut(s) 2032, 2309
FbaI TGATCA 2 cut(s) 220, 1032
FblI GTMKAC 4 cut(s) 240, 296, 506, 2962
FriOI GRGCYC 2 cut(s) 1793, 2208
GlaI GCGC 1 cut(s) 3318
GsuI CTGGAG 4 cut(s) 513, 1257, 1460, 2336
HaeII RGCGCY 1 cut(s) 3320
HaeIII GGCC 7 cut(s) 412, 1195, 1641, 1646, 1903, 2184, 2312
HapII CCGG 3 cut(s) 1431, 1643, 2118
HgaI GACGC 4 cut(s) 90, 1322, 2020, 2327
HhaI GCGC 1 cut(s) 3319
Hin1I GRCGYC 1 cut(s) 3317
Hin6I GCGC 1 cut(s) 3317
HinP1I GCGC 1 cut(s) 3317
HincII GTYRAC 1 cut(s) 507
HindII GTYRAC 1 cut(s) 507
HindIII AAGCTT 1 cut(s) 3067
HpaII CCGG 3 cut(s) 1431, 1643, 2118
HphI GGTGA 2 cut(s) 642, 2131
Hpy166II GTNNAC 5 cut(s) 241, 297, 507, 2139, 2963
Hpy8I GTNNAC 5 cut(s) 241, 297, 507, 2139, 2963
Hpy99I CGWCG 1 cut(s) 2948
HpyAV CCTTC 9 cut(s) 950, 1415, 1946, 2302, 2383, 2504, 2552, 2797, 2994
HpyCH4III ACNGT 6 cut(s) 341, 511, 785, 1213, 2680, 2901
HpyCH4IV ACGT 3 cut(s) 2365, 2596, 3322
HpyF3I CTNAG 7 cut(s) 485, 501, 825, 1565, 2423, 2720, 3273
HpySE526I ACGT 3 cut(s) 2365, 2596, 3322
Hsp92I GRCGYC 1 cut(s) 3317
HspAI GCGC 1 cut(s) 3317
KasI GGCGCC 1 cut(s) 3316
Ksp22I TGATCA 2 cut(s) 220, 1032
Kzo9I GATC 9 cut(s) 117, 220, 1032, 1226, 1561, 1658, 2740, 3210, 3337
LweI GCATC 6 cut(s) 133, 145, 424, 1022, 1066, 2535
MaeII ACGT 3 cut(s) 2365, 2596, 3322
MaeIII GTNAC 5 cut(s) 102, 491, 2121, 2213, 2592
MalI GATC 9 cut(s) 119, 222, 1034, 1228, 1563, 1660, 2742, 3212, 3339
MboI GATC 9 cut(s) 117, 220, 1032, 1226, 1561, 1658, 2740, 3210, 3337
MfeI CAATTG 1 cut(s) 16
MflI RGATCY 3 cut(s) 1226, 1561, 1658
MhlI GDGCHC 3 cut(s) 1276, 1793, 2208
Mly113I GGCGCC 1 cut(s) 3317
MlyI GAGTC 4 cut(s) 868, 2014, 2657, 3274
MmeI TCCRAC 3 cut(s) 1118, 1562, 2412
Mph1103I ATGCAT 1 cut(s) 3292
MroXI GAANNNNTTC 4 cut(s) 726, 1756, 2135, 2807
MslI CAYNNNNRTG 5 cut(s) 111, 882, 2303, 3249, 3289
MspA1I CMGCKG 2 cut(s) 2273, 2789
MspCI CTTAAG 1 cut(s) 3239
MspI CCGG 3 cut(s) 1431, 1643, 2118
MspR9I CCNGG 8 cut(s) 266, 414, 1643, 2046, 2119, 2286, 2315, 3008
MunI CAATTG 1 cut(s) 16
Mva1269I GAATGC 1 cut(s) 596
MvaI CCWGG 6 cut(s) 266, 414, 2046, 2286, 2315, 3008
NarI GGCGCC 1 cut(s) 3317
NciI CCSGG 2 cut(s) 1643, 2119
NdeII GATC 9 cut(s) 117, 220, 1032, 1226, 1561, 1658, 2740, 3210, 3337
NlaIV GGNNCC 4 cut(s) 1140, 1403, 2205, 3318
NmuCI GTSAC 2 cut(s) 102, 2121
NsiI ATGCAT 1 cut(s) 3292
NspI RCATGY 4 cut(s) 1283, 1468, 1559, 3290
OliI CACNNNNGTG 1 cut(s) 3249
PaeI GCATGC 1 cut(s) 1468
PaeR7I CTCGAG 1 cut(s) 3296
PagI TCATGA 1 cut(s) 691
PciI ACATGT 1 cut(s) 1279
PcsI WCGNNNNNNNCGW 1 cut(s) 2952
PctI GAATGC 1 cut(s) 596
PdmI GAANNNNTTC 4 cut(s) 726, 1756, 2135, 2807
PleI GAGTC 4 cut(s) 867, 2014, 2657, 3273
PluTI GGCGCC 1 cut(s) 3320
PpsI GAGTC 4 cut(s) 867, 2014, 2657, 3273
Ppu21I YACGTR 2 cut(s) 2597, 3323
PpuMI RGGWCCY 1 cut(s) 1138
PscI ACATGT 1 cut(s) 1279
PshBI ATTAAT 1 cut(s) 845
PsiI TTATAA 1 cut(s) 1343
Psp124BI GAGCTC 1 cut(s) 1793
Psp5II RGGWCCY 1 cut(s) 1138
Psp6I CCWGG 6 cut(s) 264, 412, 2044, 2284, 2313, 3006
PspGI CCWGG 6 cut(s) 264, 412, 2044, 2284, 2313, 3006
PspN4I GGNNCC 4 cut(s) 1140, 1403, 2205, 3318
PspPI GGNCC 7 cut(s) 46, 410, 1138, 1569, 1640, 2183, 2311
PspPPI RGGWCCY 1 cut(s) 1138
PspXI VCTCGAGB 1 cut(s) 3296
PstI CTGCAG 3 cut(s) 1963, 2278, 2442
PstNI CAGNNNCTG 1 cut(s) 2738
PsuI RGATCY 3 cut(s) 1226, 1561, 1658
PvuII CAGCTG 2 cut(s) 2273, 2789
RsaI GTAC 4 cut(s) 540, 646, 1326, 2838
RsaNI GTAC 4 cut(s) 539, 645, 1325, 2837
RseI CAYNNNNRTG 5 cut(s) 111, 882, 2303, 3249, 3289
SacI GAGCTC 1 cut(s) 1793
SalI GTCGAC 1 cut(s) 505
Sau3AI GATC 9 cut(s) 117, 220, 1032, 1226, 1561, 1658, 2740, 3210, 3337
Sau96I GGNCC 7 cut(s) 46, 410, 1138, 1569, 1640, 2183, 2311
SchI GAGTC 4 cut(s) 868, 2014, 2657, 3274
ScrFI CCNGG 8 cut(s) 266, 414, 1643, 2046, 2119, 2286, 2315, 3008
SduI GDGCHC 3 cut(s) 1276, 1793, 2208
SfaNI GCATC 6 cut(s) 133, 145, 424, 1022, 1066, 2535
SfcI CTRYAG 4 cut(s) 1523, 1959, 2274, 2438
SfoI GGCGCC 1 cut(s) 3318
Sfr274I CTCGAG 1 cut(s) 3296
SinI GGWCC 3 cut(s) 46, 1138, 1569
SlaI CTCGAG 1 cut(s) 3296
SmiMI CAYNNNNRTG 5 cut(s) 111, 882, 2303, 3249, 3289
SmlI CTYRAG 7 cut(s) 715, 807, 1024, 1070, 1328, 3239, 3296
SmoI CTYRAG 7 cut(s) 715, 807, 1024, 1070, 1328, 3239, 3296
SpeI ACTAGT 1 cut(s) 1301
SphI GCATGC 1 cut(s) 1468
SsiI CCGC 3 cut(s) 1307, 1907, 2563
SspDI GGCGCC 1 cut(s) 3316
SspI AATATT 2 cut(s) 2221, 2233
SstI GAGCTC 1 cut(s) 1793
StyD4I CCNGG 8 cut(s) 264, 412, 1641, 2044, 2117, 2284, 2313, 3006
StyI CCWWGG 2 cut(s) 1290, 2744
TaaI ACNGT 6 cut(s) 341, 511, 785, 1213, 2680, 2901
TaiI ACGT 3 cut(s) 2368, 2599, 3325
TaqI TCGA 5 cut(s) 506, 2893, 3103, 3297, 3336
TatI WGTACW 2 cut(s) 538, 1324
TscAI CASTG 6 cut(s) 351, 559, 1420, 1975, 2641, 3220
TseFI GTSAC 2 cut(s) 102, 2121
Tsp45I GTSAC 2 cut(s) 102, 2121
TspGWI ACGGA 2 cut(s) 167, 3107
TspRI CASTG 6 cut(s) 351, 559, 1420, 1975, 2641, 3220
Vha464I CTTAAG 1 cut(s) 3239
VpaK11BI GGWCC 3 cut(s) 46, 1138, 1569
VspI ATTAAT 1 cut(s) 845
XapI RAATTY 4 cut(s) 1681, 2003, 2975, 3194
XbaI TCTAGA 3 cut(s) 92, 1057, 1984
XceI RCATGY 4 cut(s) 1283, 1468, 1559, 3290
XcmI CCANNNNNNNNNTGG 1 cut(s) 2636
XhoI CTCGAG 1 cut(s) 3296
XmaJI CCTAGG 1 cut(s) 2744
XmiI GTMKAC 4 cut(s) 240, 296, 506, 2962
XmnI GAANNNNTTC 4 cut(s) 726, 1756, 2135, 2807
Zsp2I ATGCAT 1 cut(s) 3292
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.