Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0005640.1

Orthogroup ID

OG0002098

Physical Location & Seq

Genomic Coordinates Reverse (-)

26156 .. 33195

Gene Structure 7040 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1686 bp

atgggttttcacaaaatcaattgtgatactgcatggaagtcgccgtcctcctctggtctaggagtggtgattagggaccatgatggtcttgacgccgcagttgagatagcactgcctggcccagctggtggagaagctggtgaattcgttgacgaaggaggagtccatgtcgatgaccactgttcggggctgggcttcttccgcttatttcattcaaggtatgaattttattggatttcagtacttgggttttggttcttttattatttcaatttcataactacgatttgcatgcacaatttgatcatctgggtctggttgtaccgaaaaggttcacctccactgatagaagccttcgttccaaaatctggtaatgtgaaaaaagaagaagctctgaagattggtctggatcgagcgcagagtgtgcaagtggaagaggtaggcggcggttgccatccggtcggtgcaggcggtggtggtgtcctggcagttgttggtatgattcatgcgcaaccaccactctgcaagtaccaccacaagaatgctctaagcactttgtttgtgtcgtctttgccaaaacctgtggttcgtgttccactccgtgaccagtttctctcttcttctcaacctccctcgcgcgctcaagttgatcaaaccatggcctctgcgatgctcaacggggccgagcatctcacactccggcgaggtttatccccaaatgggttgggttttgttgggtcggattttcatgggaagcagtttgtgaagatgggtttggtttcaaacactagaatttccaagtctggtgccagagccattgtgcccaagtgtagtgtctcagcttccaggcctgcttctcagcccaggttcattcagcacaagaaagaggctttctggttttataggtttctgtcaattgtttatgaccatgtcataaaccctgggcactggactgaggacatgagggacgatgcacttgagccagctgatcttaacgacaggagaatgattgtcgtagatgtgggtggaggtactgggttcaccaccttggggatagttaagcatgtggatgccaagaatgtgaccattcttgatcagtcccctcatcagctagctagggctaagaagaaggagcctttgaaggagtgcaagatcattgagggcgatgctgaggacttgccttttcggactgattatgcggatcgatatgtatctgcaggaagtattgagtactggccagacccacagcgtggcatcaaggaagcatatagggtcttgaaacttggaggaaaggcatgcgtgattggtcctgtgtacccaacgttttggttgtctcgcttctttgctgatgtatggatgcttttccccaaggaggaagagtacattgaatggttcgagaaggctggattcaaagatgtccaactgaaaagaattggcccaaaatggtaccgtggggttcgccgccatggattgataatggggtgttctgtaacaggcgttaagcctgcatctggggattctcctttacagctcggaccaaaagcagaggatgtgtcagagcctgtaaagccactatcgttccttacgcgcttcatcttgggtgccttggcaggaatgtactacgtactggtgcctatatacatgtggctcaaagatcaaattgtaccaaaaggtcaaccaatctaa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006732 GO:0006766 GO:0006775 GO:0008150 GO:0008152 GO:0008168 GO:0008757 GO:0009058 GO:0009108 GO:0009110 GO:0009507 GO:0009526 GO:0009528 GO:0009536 GO:0009706 GO:0009941 GO:0009987 GO:0010189 GO:0010236 GO:0016020 GO:0016740 GO:0016741 GO:0018130 GO:0019866 GO:0031090 GO:0031967 GO:0031969 GO:0031975 GO:0032259 GO:0042170 GO:0042180 GO:0042181 GO:0042360 GO:0042362 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044249 GO:0044281 GO:0044283 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046483 GO:0051186 GO:0051188 GO:0051741 GO:0071704 GO:1901360 GO:1901362 GO:1901576 GO:1901615 GO:1901617 GO:1901661 GO:1901663

KEGG Pathways

Metabolic & Signaling

ko00130 ko01100 ko01110 map00130 map01100 map01110

Pfam Domains

Protein Families

Methyltransf_11 Methyltransf_25

Protein Analysis

561

Amino Acids

62.32

Weight (kDa)

8.83

Isoelectric Point (pI)

44.06

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Methyltransf_31	PF13847	333 - 438	8.5e-11	Methyltransferase domain
Ubie_methyltran	PF01209	336 - 439	7.5e-12	ubiE/COQ5 methyltransferase family
Methyltransf_25	PF13649	338 - 430	2.2e-16	Methyltransferase domain
Methyltransf_11	PF08241	339 - 433	5.8e-19	Methyltransferase domain
Methyltransf_12	PF08242	339 - 431	1.7e-09	Methyltransferase domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002098)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G63410
fragaria_vesca	FvH4_2g22850 FvH4_4g01770
malus_domestica	MD03G1256900.v1.1 MD11G1277500.v1.1 MD13G1201900.v1.1 MD16G1202200.v1.1
prunus_persica	Prupe.1G023700_v2.0.a1 Prupe.1G023700_v2.0.a1 Prupe.1G023700_v2.0.a1 Prupe.1G023700_v2.0.a1 Prupe.8G233800_v2.0.a1
pyrus_communis	pycom03g20360 pycom13g17530 pycom16g17060
rosa_chinensis	RchiOBHm_Chr4g0388681 RchiOBHm_Chr4g0388811 RchiOBHm_Chr6g0289771
rosa_laevigata	RLG00000010027 RLG00000012268
rosa_multiflora	Rmu_co8119594.1_g000001 Rmu_sc0000697.1_g000014 Rmu_sc0004459.1_g000002 Rmu_sc0005640.1_g000008 Rmu_sc0016023.1_g000001 Rmu_sc0027068.1_g000001
rosa_roxburghii	Rroxscaffold_5G00335090 Rroxscaffold_7G00177560 Rroxscaffold_7G00178080
rosa_rugosa	Rorug03G0320000 Rorug06G0206500 Rorug06G0206600
rosa_samantha	Rh4AG024800 Rh4BG017800 Rh4CG026800 Rh4CG027500 Rh4DG018100 Rh6AG318300 Rh6BG325600 Rh6CG331400 Rh6DG316900
rosa_wichuraiana	Rw4G001730 Rw4G001770 Rw6G027460

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	510
Acc65I	GGTACC	1 cut(s)	1446
AccB1I	GGYRCC	4 cut(s)	806, 1446, 1601, 1630
AccB7I	CCANNNNNTGG	3 cut(s)	128, 368, 1250
AccII	CGCG	3 cut(s)	637, 639, 1588
AciI	CCGC	7 cut(s)	96, 202, 444, 447, 471, 1199, 1462
AclI	AACGTT	1 cut(s)	1322
AclWI	GGATC	2 cut(s)	417, 1209
AcoI	YGGCCR	1 cut(s)	1235
AcsI	RAATTY	3 cut(s)	143, 224, 792
AcuI	CTGAAG	1 cut(s)	416
AcyI	GRCGYC	1 cut(s)	93
AdeI	CACNNNGTG	2 cut(s)	602, 1250
AfiI	CCNNNNNNNGG	8 cut(s)	128, 184, 368, 720, 1050, 1250, 1372, 1511
AflIII	ACRYGT	1 cut(s)	1641
AgsI	TTSAA	7 cut(s)	216, 271, 783, 1141, 1279, 1388, 1411
AjnI	CCWGG	5 cut(s)	115, 483, 845, 863, 940
AjuI	GAANNNNNNNTTGG	2 cut(s)	758, 790
AluBI	AGCT	8 cut(s)	125, 137, 392, 842, 986, 1111, 1115, 1531
AluI	AGCT	8 cut(s)	125, 137, 392, 842, 986, 1111, 1115, 1531
Alw26I	GTCTC	2 cut(s)	841, 1338
AlwI	GGATC	2 cut(s)	417, 1209
AlwNI	CAGNNNCTG	1 cut(s)	1562
AoxI	GGCC	6 cut(s)	118, 660, 681, 848, 1235, 1435
ApoI	RAATTY	3 cut(s)	143, 224, 792
ArsI	GACNNNNNNTTYG	2 cut(s)	147, 179
Asp700I	GAANNNNTTC	1 cut(s)	331
Asp718I	GGTACC	1 cut(s)	1446
AspLEI	GCGC	5 cut(s)	418, 511, 639, 641, 1590
AspS9I	GGNCC	6 cut(s)	76, 119, 681, 1307, 1436, 1535
AsuHPI	GGTGA	4 cut(s)	79, 152, 327, 1033
AsuNHI	GCTAGC	1 cut(s)	1111
AvaII	GGWCC	3 cut(s)	76, 1307, 1535
BaeGI	GKGCMC	2 cut(s)	825, 948
BalI	TGGCCA	1 cut(s)	1237
BanI	GGYRCC	4 cut(s)	806, 1446, 1601, 1630
BbvCI	CCTCAGC	1 cut(s)	1170
BccI	CCATC	3 cut(s)	77, 462, 763
BceAI	ACGGC	1 cut(s)	28
BcgI	CGANNNNNNTGC	4 cut(s)	21, 55, 274, 308
BciT130I	CCWGG	5 cut(s)	117, 485, 847, 865, 942
BclI	TGATCA	3 cut(s)	303, 649, 1093
BcoDI	GTCTC	2 cut(s)	841, 1338
BfaI	CTAG	4 cut(s)	59, 789, 1112, 1116
BfmI	CTRYAG	1 cut(s)	1215
BisI	GCNGC	3 cut(s)	96, 445, 1462
BlsI	GCNGC	3 cut(s)	97, 446, 1463
BmcAI	AGTACT	2 cut(s)	243, 1232
Bme1390I	CCNGG	5 cut(s)	117, 485, 847, 865, 942
Bme18I	GGWCC	3 cut(s)	76, 1307, 1535
BmgT120I	GGNCC	6 cut(s)	76, 119, 681, 1307, 1436, 1535
BmiI	GGNNCC	7 cut(s)	77, 682, 808, 1134, 1448, 1603, 1632
BmrFI	CCNGG	5 cut(s)	117, 485, 847, 865, 942
BmrI	ACTGGG	1 cut(s)	1044
BmsI	GCATC	8 cut(s)	660, 697, 961, 1060, 1156, 1263, 1347, 1517
BmtI	GCTAGC	1 cut(s)	1115
BmuI	ACTGGG	1 cut(s)	1044
Bpu10I	CCTNAGC	1 cut(s)	1170
BpuEI	CTTGAG	2 cut(s)	627, 998
Bsa29I	ATCGAT	1 cut(s)	1204
BsaAI	YACGTR	1 cut(s)	1624
BsaBI	GATNNNNATC	1 cut(s)	1210
BsaHI	GRCGYC	1 cut(s)	93
BsaJI	CCNNGG	9 cut(s)	657, 863, 940, 941, 1047, 1368, 1450, 1465, 1605
BsaWI	WCCGGW	1 cut(s)	457
BsaXI	ACNNNNNCTCC	4 cut(s)	153, 183, 1364, 1394
Bsc4I	CCNNNNNNNGG	8 cut(s)	128, 184, 368, 720, 1050, 1250, 1372, 1511
Bse1I	ACTGG	5 cut(s)	607, 953, 1039, 1238, 1632
Bse8I	GATNNNNATC	1 cut(s)	1210
BseBI	CCWGG	5 cut(s)	117, 485, 847, 865, 942
BseCI	ATCGAT	1 cut(s)	1204
BseDI	CCNNGG	9 cut(s)	657, 863, 940, 941, 1047, 1368, 1450, 1465, 1605
BseGI	GGATG	4 cut(s)	454, 1075, 1362, 1555
BseJI	GATNNNNATC	1 cut(s)	1210
BseLI	CCNNNNNNNGG	8 cut(s)	128, 184, 368, 720, 1050, 1250, 1372, 1511
BseMII	CTCAG	4 cut(s)	852, 872, 945, 1161
BseNI	ACTGG	5 cut(s)	607, 953, 1039, 1238, 1632
BsePI	GCGCGC	1 cut(s)	637
BseRI	GAGGAG	2 cut(s)	40, 174
BseSI	GKGCMC	2 cut(s)	825, 948
BseYI	CCCAGC	2 cut(s)	121, 190
BsgI	GTGCAG	1 cut(s)	486
Bsh1236I	CGCG	3 cut(s)	637, 639, 1588
Bsh1285I	CGRYCG	1 cut(s)	462
BshFI	GGCC	6 cut(s)	120, 662, 683, 850, 1237, 1437
BshNI	GGYRCC	4 cut(s)	806, 1446, 1601, 1630
BshVI	ATCGAT	1 cut(s)	1204
BsiEI	CGRYCG	1 cut(s)	462
BsiSI	CCGG	2 cut(s)	458, 700
BslFI	GGGAC	3 cut(s)	89, 980, 1084
BslI	CCNNNNNNNGG	8 cut(s)	128, 184, 368, 720, 1050, 1250, 1372, 1511
BsmAI	GTCTC	2 cut(s)	841, 1338
BsmFI	GGGAC	3 cut(s)	89, 980, 1084
BsmI	GAATGC	1 cut(s)	547
BsnI	GGCC	6 cut(s)	120, 662, 683, 850, 1237, 1437
Bsp1286I	GDGCHC	2 cut(s)	825, 948
Bsp143I	GATC	8 cut(s)	303, 409, 649, 988, 1093, 1152, 1201, 1654
Bsp19I	CCATGG	2 cut(s)	657, 1465
BspACI	CCGC	7 cut(s)	96, 202, 444, 447, 471, 1199, 1462
BspANI	GGCC	6 cut(s)	120, 662, 683, 850, 1237, 1437
BspCNI	CTCAG	4 cut(s)	851, 871, 946, 1162
BspDI	ATCGAT	1 cut(s)	1204
BspFNI	CGCG	3 cut(s)	637, 639, 1588
BspLI	GGNNCC	7 cut(s)	77, 682, 808, 1134, 1448, 1603, 1632
BspMAI	CTGCAG	1 cut(s)	1219
BspOI	GCTAGC	1 cut(s)	1115
BspPI	GGATC	2 cut(s)	417, 1209
BspT107I	GGYRCC	4 cut(s)	806, 1446, 1601, 1630
BsrI	ACTGG	5 cut(s)	607, 953, 1039, 1238, 1632
BssECI	CCNNGG	9 cut(s)	657, 863, 940, 941, 1047, 1368, 1450, 1465, 1605
BssHII	GCGCGC	1 cut(s)	637
BssMI	GATC	8 cut(s)	303, 409, 649, 988, 1093, 1152, 1201, 1654
BssNI	GRCGYC	1 cut(s)	93
BssT1I	CCWWGG	5 cut(s)	657, 1047, 1368, 1465, 1605
Bst2UI	CCWGG	5 cut(s)	117, 485, 847, 865, 942
Bst4CI	ACNGT	2 cut(s)	182, 1451
Bst6I	CTCTTC	3 cut(s)	429, 622, 1371
BstACI	GRCGYC	1 cut(s)	93
BstAPI	GCANNNNNTGC	1 cut(s)	424
BstBAI	YACGTR	1 cut(s)	1624
BstC8I	GCNNGC	8 cut(s)	293, 469, 639, 852, 984, 1113, 1297, 1506
BstDEI	CTNAG	6 cut(s)	548, 838, 858, 954, 1122, 1170
BstDSI	CCRYGG	3 cut(s)	657, 1450, 1465
BstF5I	GGATG	4 cut(s)	454, 1075, 1362, 1555
BstFNI	CGCG	3 cut(s)	637, 639, 1588
BstHHI	GCGC	5 cut(s)	418, 511, 639, 641, 1590
BstKTI	GATC	8 cut(s)	306, 412, 652, 991, 1096, 1155, 1204, 1657
BstMAI	GTCTC	2 cut(s)	841, 1338
BstMBI	GATC	8 cut(s)	303, 409, 649, 988, 1093, 1152, 1201, 1654
BstMCI	CGRYCG	1 cut(s)	462
BstMWI	GCNNNNNNNGC	4 cut(s)	201, 424, 450, 1567
BstNI	CCWGG	5 cut(s)	117, 485, 847, 865, 942
BstNSI	RCATGY	4 cut(s)	295, 1067, 1299, 1645
BstSCI	CCNGG	5 cut(s)	115, 483, 845, 863, 940
BstSFI	CTRYAG	1 cut(s)	1215
BstSLI	GKGCMC	2 cut(s)	825, 948
BstSNI	TACGTA	1 cut(s)	1624
BstUI	CGCG	3 cut(s)	637, 639, 1588
BstXI	CCANNNNNNTGG	1 cut(s)	1326
Bsu15I	ATCGAT	1 cut(s)	1204
BsuRI	GGCC	6 cut(s)	120, 662, 683, 850, 1237, 1437
BsuTUI	ATCGAT	1 cut(s)	1204
BtgI	CCRYGG	3 cut(s)	657, 1450, 1465
BtgZI	GCGATG	2 cut(s)	683, 1179
BtsCI	GGATG	4 cut(s)	454, 1075, 1362, 1555
BtsI	GCAGTG	1 cut(s)	110
BtsIMutI	CAGTG	4 cut(s)	110, 178, 341, 946
Cac8I	GCNNGC	8 cut(s)	293, 469, 639, 852, 984, 1113, 1297, 1506
CaiI	CAGNNNCTG	1 cut(s)	1562
CfoI	GCGC	5 cut(s)	418, 511, 639, 641, 1590
Cfr13I	GGNCC	6 cut(s)	76, 119, 681, 1307, 1436, 1535
ClaI	ATCGAT	1 cut(s)	1204
CseI	GACGC	1 cut(s)	101
CspCI	CAANNNNNGTGG	2 cut(s)	564, 599
DdeI	CTNAG	6 cut(s)	548, 838, 858, 954, 1122, 1170
DpnI	GATC	8 cut(s)	305, 411, 651, 990, 1095, 1154, 1203, 1656
DpnII	GATC	8 cut(s)	303, 409, 649, 988, 1093, 1152, 1201, 1654
DraIII	CACNNNGTG	2 cut(s)	602, 1250
EaeI	YGGCCR	1 cut(s)	1235
Eam1104I	CTCTTC	3 cut(s)	429, 622, 1371
EarI	CTCTTC	3 cut(s)	429, 622, 1371
Eco105I	TACGTA	1 cut(s)	1624
Eco130I	CCWWGG	5 cut(s)	657, 1047, 1368, 1465, 1605
Eco147I	AGGCCT	1 cut(s)	850
Eco47I	GGWCC	3 cut(s)	76, 1307, 1535
Eco57I	CTGAAG	1 cut(s)	416
EcoRI	GAATTC	1 cut(s)	143
EcoRII	CCWGG	5 cut(s)	115, 483, 845, 863, 940
EcoT14I	CCWWGG	5 cut(s)	657, 1047, 1368, 1465, 1605
ErhI	CCWWGG	5 cut(s)	657, 1047, 1368, 1465, 1605
FaqI	GGGAC	3 cut(s)	89, 980, 1084
FbaI	TGATCA	3 cut(s)	303, 649, 1093
Fnu4HI	GCNGC	3 cut(s)	96, 445, 1462
FokI	GGATG	4 cut(s)	441, 1082, 1369, 1562
Fsp4HI	GCNGC	3 cut(s)	96, 445, 1462
FspBI	CTAG	4 cut(s)	59, 789, 1112, 1116
FspI	TGCGCA	1 cut(s)	510
GlaI	GCGC	5 cut(s)	417, 510, 638, 640, 1589
GluI	GCNGC	3 cut(s)	96, 445, 1462
GsaI	CCCAGC	2 cut(s)	125, 194
HaeIII	GGCC	6 cut(s)	120, 662, 683, 850, 1237, 1437
HapII	CCGG	2 cut(s)	458, 700
HgaI	GACGC	1 cut(s)	101
HhaI	GCGC	5 cut(s)	418, 511, 639, 641, 1590
Hin1I	GRCGYC	1 cut(s)	93
Hin6I	GCGC	5 cut(s)	416, 509, 637, 639, 1588
HinP1I	GCGC	5 cut(s)	416, 509, 637, 639, 1588
HincII	GTYRAC	2 cut(s)	151, 1676
HindII	GTYRAC	2 cut(s)	151, 1676
HinfI	GANTC	4 cut(s)	162, 502, 1407, 1517
HpaII	CCGG	2 cut(s)	458, 700
HphI	GGTGA	4 cut(s)	79, 152, 327, 1033
Hpy166II	GTNNAC	5 cut(s)	151, 335, 1041, 1315, 1676
Hpy188I	TCNGA	5 cut(s)	396, 742, 1188, 1535, 1558
Hpy188III	TCNNGA	5 cut(s)	89, 407, 1091, 1276, 1396
Hpy8I	GTNNAC	5 cut(s)	151, 335, 1041, 1315, 1676
HpyAV	CCTTC	5 cut(s)	149, 364, 1123, 1135, 1393
HpyCH4III	ACNGT	2 cut(s)	182, 1451
HpyCH4IV	ACGT	2 cut(s)	1322, 1623
HpyF10VI	GCNNNNNNNGC	4 cut(s)	201, 424, 450, 1567
HpyF3I	CTNAG	6 cut(s)	548, 838, 858, 954, 1122, 1170
HpySE526I	ACGT	2 cut(s)	1322, 1623
Hsp92I	GRCGYC	1 cut(s)	93
HspAI	GCGC	5 cut(s)	416, 509, 637, 639, 1588
KpnI	GGTACC	1 cut(s)	1450
Ksp22I	TGATCA	3 cut(s)	303, 649, 1093
Kzo9I	GATC	8 cut(s)	303, 409, 649, 988, 1093, 1152, 1201, 1654
LmnI	GCTCC	1 cut(s)	1132
LweI	GCATC	8 cut(s)	660, 697, 961, 1060, 1156, 1263, 1347, 1517
MaeI	CTAG	4 cut(s)	59, 789, 1112, 1116
MaeII	ACGT	2 cut(s)	1322, 1623
MaeIII	GTNAC	3 cut(s)	602, 1081, 1489
MalI	GATC	8 cut(s)	305, 411, 651, 990, 1095, 1154, 1203, 1656
MboI	GATC	8 cut(s)	303, 409, 649, 988, 1093, 1152, 1201, 1654
MboII	GAAGA	9 cut(s)	190, 398, 409, 446, 609, 612, 778, 1138, 1388
MfeI	CAATTG	2 cut(s)	19, 915
MhlI	GDGCHC	2 cut(s)	825, 948
MlsI	TGGCCA	1 cut(s)	1237
MluCI	AATT	9 cut(s)	19, 143, 224, 271, 298, 792, 915, 1431, 1659
MluNI	TGGCCA	1 cut(s)	1237
MlyI	GAGTC	1 cut(s)	171
MmeI	TCCRAC	2 cut(s)	720, 1444
Mox20I	TGGCCA	1 cut(s)	1237
MroXI	GAANNNNTTC	1 cut(s)	331
MscI	TGGCCA	1 cut(s)	1237
MseI	TTAA	3 cut(s)	993, 1059, 1500
MslI	CAYNNNNRTG	3 cut(s)	171, 540, 1068
Msp20I	TGGCCA	1 cut(s)	1237
MspA1I	CMGCKG	2 cut(s)	125, 986
MspI	CCGG	2 cut(s)	458, 700
MspR9I	CCNGG	5 cut(s)	117, 485, 847, 865, 942
MunI	CAATTG	2 cut(s)	19, 915
Mva1269I	GAATGC	1 cut(s)	547
MvaI	CCWGG	5 cut(s)	117, 485, 847, 865, 942
MvnI	CGCG	3 cut(s)	637, 639, 1588
MwoI	GCNNNNNNNGC	4 cut(s)	201, 424, 450, 1567
NcoI	CCATGG	2 cut(s)	657, 1465
NdeII	GATC	8 cut(s)	303, 409, 649, 988, 1093, 1152, 1201, 1654
NheI	GCTAGC	1 cut(s)	1111
NlaIV	GGNNCC	7 cut(s)	77, 682, 808, 1134, 1448, 1603, 1632
NmeAIII	GCCGAG	1 cut(s)	709
NmuCI	GTSAC	2 cut(s)	602, 1081
NsbI	TGCGCA	1 cut(s)	510
NspI	RCATGY	4 cut(s)	295, 1067, 1299, 1645
PaeI	GCATGC	2 cut(s)	295, 1299
PasI	CCCWGGG	1 cut(s)	941
PauI	GCGCGC	1 cut(s)	637
PceI	AGGCCT	1 cut(s)	850
PciI	ACATGT	1 cut(s)	1641
PctI	GAATGC	1 cut(s)	547
PdmI	GAANNNNTTC	1 cut(s)	331
PfeI	GAWTC	3 cut(s)	502, 1407, 1517
PflFI	GACNNNGTC	1 cut(s)	929
PflMI	CCANNNNNTGG	3 cut(s)	128, 368, 1250
PkrI	GCNGC	3 cut(s)	97, 446, 1463
PleI	GAGTC	1 cut(s)	170
PpsI	GAGTC	1 cut(s)	170
Ppu21I	YACGTR	1 cut(s)	1624
PscI	ACATGT	1 cut(s)	1641
Psp1406I	AACGTT	1 cut(s)	1322
Psp6I	CCWGG	5 cut(s)	115, 483, 845, 863, 940
PspFI	CCCAGC	2 cut(s)	121, 190
PspGI	CCWGG	5 cut(s)	115, 483, 845, 863, 940
PspN4I	GGNNCC	7 cut(s)	77, 682, 808, 1134, 1448, 1603, 1632
PspPI	GGNCC	6 cut(s)	76, 119, 681, 1307, 1436, 1535
PstI	CTGCAG	1 cut(s)	1219
PstNI	CAGNNNCTG	1 cut(s)	1562
PsyI	GACNNNGTC	1 cut(s)	929
PteI	GCGCGC	1 cut(s)	637
PvuII	CAGCTG	2 cut(s)	125, 986
RseI	CAYNNNNRTG	3 cut(s)	171, 540, 1068
SaqAI	TTAA	3 cut(s)	993, 1059, 1500
SatI	GCNGC	3 cut(s)	96, 445, 1462
Sau3AI	GATC	8 cut(s)	303, 409, 649, 988, 1093, 1152, 1201, 1654
Sau96I	GGNCC	6 cut(s)	76, 119, 681, 1307, 1436, 1535
ScaI	AGTACT	2 cut(s)	243, 1232
SchI	GAGTC	1 cut(s)	171
ScrFI	CCNGG	5 cut(s)	117, 485, 847, 865, 942
SduI	GDGCHC	2 cut(s)	825, 948
SfaNI	GCATC	8 cut(s)	660, 697, 961, 1060, 1156, 1263, 1347, 1517
SfcI	CTRYAG	1 cut(s)	1215
SinI	GGWCC	3 cut(s)	76, 1307, 1535
SmiMI	CAYNNNNRTG	3 cut(s)	171, 540, 1068
SmlI	CTYRAG	2 cut(s)	642, 977
SmoI	CTYRAG	2 cut(s)	642, 977
SnaBI	TACGTA	1 cut(s)	1624
SphI	GCATGC	2 cut(s)	295, 1299
Sse9I	AATT	9 cut(s)	19, 143, 224, 271, 298, 792, 915, 1431, 1659
SseBI	AGGCCT	1 cut(s)	850
SsiI	CCGC	7 cut(s)	96, 202, 444, 447, 471, 1199, 1462
SspMI	CTAG	4 cut(s)	59, 789, 1112, 1116
StuI	AGGCCT	1 cut(s)	850
StyD4I	CCNGG	5 cut(s)	115, 483, 845, 863, 940
StyI	CCWWGG	5 cut(s)	657, 1047, 1368, 1465, 1605
TaaI	ACNGT	2 cut(s)	182, 1451
TaiI	ACGT	2 cut(s)	1325, 1626
TaqI	TCGA	4 cut(s)	171, 412, 1204, 1395
TasI	AATT	9 cut(s)	19, 143, 224, 271, 298, 792, 915, 1431, 1659
TatI	WGTACW	4 cut(s)	241, 1230, 1380, 1617
TauI	GCSGC	3 cut(s)	98, 447, 1464
TfiI	GAWTC	3 cut(s)	502, 1407, 1517
Tru1I	TTAA	3 cut(s)	993, 1059, 1500
Tru9I	TTAA	3 cut(s)	993, 1059, 1500
TscAI	CASTG	4 cut(s)	117, 185, 348, 953
TseFI	GTSAC	2 cut(s)	602, 1081
Tsp45I	GTSAC	2 cut(s)	602, 1081
TspDTI	ATGAA	7 cut(s)	200, 237, 265, 494, 737, 859, 1582
TspGWI	ACGGA	1 cut(s)	590
TspRI	CASTG	4 cut(s)	117, 185, 348, 953
Tth111I	GACNNNGTC	1 cut(s)	929
Van91I	CCANNNNNTGG	3 cut(s)	128, 368, 1250
VpaK11BI	GGWCC	3 cut(s)	76, 1307, 1535
XapI	RAATTY	3 cut(s)	143, 224, 792
XceI	RCATGY	4 cut(s)	295, 1067, 1299, 1645
XmnI	GAANNNNTTC	1 cut(s)	331
XspI	CTAG	4 cut(s)	59, 789, 1112, 1116
ZrmI	AGTACT	2 cut(s)	243, 1232

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.