Rmu_sc0018708.1_g000006

Alpha-aminoadipic semialdehyde

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0018708.1
Physical Location & Seq
Forward (+)
43241 .. 43959
719 bp
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UTR
Exon/CDS
Intron
Rmu_sc0018708.1_g000006.1.cds

Sequence Viewer

Length: 435 bp
atggttgaacacaaagatcccaaaaattcatttgacaaagctgattattatgtacatccagaacactacaacccggttttccatgaaaatatagctccttatgcatctgtaatcgtgaattgtatgtattgggagaaaagatatcctcgattattgagtacaaagcagtttcaagatttaacaaggaaaggatgtaagcttgttggtatctctgatataacttgtgatatagggggatcaatagagtttgttaatcaagccacacaaattgactcacctttcttcagatatgatccaataaaagattcttaccatcaggacatggaaggtgatggtgtggtatgttcagctgtggacattcttccaacagaatttgcaaaagaggtacctttcatcaatgcattttattcagtaaatgttataatttttatctaa

Protein Analysis

144

Amino Acids

16.6

Weight (kDa)

5.08

Isoelectric Point (pI)

48.76

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 422
Acc65I GGTACC 1 cut(s) 385
AccB1I GGYRCC 1 cut(s) 385
AclWI GGATC 3 cut(s) 11, 244, 287
AcsI RAATTY 2 cut(s) 25, 371
AcuI CTGAAG 1 cut(s) 268
AfaI GTAC 3 cut(s) 54, 160, 387
AgsI TTSAA 2 cut(s) 8, 173
AjuI GAANNNNNNNTTGG 2 cut(s) 289, 321
AluBI AGCT 4 cut(s) 41, 95, 199, 350
AluI AGCT 4 cut(s) 41, 95, 199, 350
AlwI GGATC 3 cut(s) 11, 244, 287
ApoI RAATTY 2 cut(s) 25, 371
Asp718I GGTACC 1 cut(s) 385
AsuC2I CCSGG 1 cut(s) 74
AsuHPI GGTGA 2 cut(s) 267, 341
BanI GGYRCC 1 cut(s) 385
BccI CCATC 2 cut(s) 321, 326
BcnI CCSGG 1 cut(s) 74
Bme1390I CCNGG 1 cut(s) 74
BmiI GGNNCC 1 cut(s) 387
BmrFI CCNGG 1 cut(s) 74
BmsI GCATC 1 cut(s) 113
BpuMI CCSGG 1 cut(s) 74
BseGI GGATG 2 cut(s) 55, 197
BshNI GGYRCC 1 cut(s) 385
BsiSI CCGG 1 cut(s) 74
Bsp1407I TGTACA 1 cut(s) 52
Bsp143I GATC 3 cut(s) 16, 236, 292
BspLI GGNNCC 1 cut(s) 387
BspPI GGATC 3 cut(s) 11, 244, 287
BspT107I GGYRCC 1 cut(s) 385
BsrGI TGTACA 1 cut(s) 52
BssMI GATC 3 cut(s) 16, 236, 292
BstAUI TGTACA 1 cut(s) 52
BstF5I GGATG 2 cut(s) 55, 197
BstKTI GATC 3 cut(s) 19, 239, 295
BstMBI GATC 3 cut(s) 16, 236, 292
BstMWI GCNNNNNNNGC 1 cut(s) 101
BstSCI CCNGG 1 cut(s) 72
BstX2I RGATCY 1 cut(s) 16
BstYI RGATCY 1 cut(s) 16
BtsCI GGATG 2 cut(s) 55, 197
Csp6I GTAC 3 cut(s) 53, 159, 386
CspCI CAANNNNNGTGG 2 cut(s) 250, 285
CviAII CATG 2 cut(s) 83, 322
CviJI RGCY 5 cut(s) 41, 95, 199, 260, 350
CviKI_1 RGCY 5 cut(s) 41, 95, 199, 260, 350
CviQI GTAC 3 cut(s) 53, 159, 386
DpnI GATC 3 cut(s) 18, 238, 294
DpnII GATC 3 cut(s) 16, 236, 292
Eco32I GATATC 1 cut(s) 143
Eco57I CTGAAG 1 cut(s) 268
EcoRV GATATC 1 cut(s) 143
EcoT22I ATGCAT 2 cut(s) 106, 403
FaeI CATG 2 cut(s) 86, 325
FatI CATG 2 cut(s) 82, 321
FokI GGATG 2 cut(s) 42, 204
HapII CCGG 1 cut(s) 74
Hin1II CATG 2 cut(s) 86, 325
HindIII AAGCTT 1 cut(s) 197
HinfI GANTC 2 cut(s) 272, 305
HpaII CCGG 1 cut(s) 74
HphI GGTGA 2 cut(s) 267, 341
Hpy166II GTNNAC 1 cut(s) 355
Hpy188I TCNGA 2 cut(s) 214, 287
Hpy188III TCNNGA 4 cut(s) 59, 115, 173, 317
Hpy8I GTNNAC 1 cut(s) 355
HpyAV CCTTC 1 cut(s) 320
HpyCH4V TGCA 3 cut(s) 104, 377, 401
HpyF10VI GCNNNNNNNGC 1 cut(s) 101
Hsp92II CATG 2 cut(s) 86, 325
KpnI GGTACC 1 cut(s) 389
Kzo9I GATC 3 cut(s) 16, 236, 292
LmnI GCTCC 1 cut(s) 100
LpnPI CCDG 3 cut(s) 72, 87, 302
LweI GCATC 1 cut(s) 113
MalI GATC 3 cut(s) 18, 238, 294
MboI GATC 3 cut(s) 16, 236, 292
MboII GAAGA 2 cut(s) 274, 353
MflI RGATCY 1 cut(s) 16
MluCI AATT 5 cut(s) 25, 118, 267, 371, 423
MlyI GAGTC 1 cut(s) 266
MmeI TCCRAC 1 cut(s) 389
MnlI CCTC 2 cut(s) 156, 376
Mph1103I ATGCAT 2 cut(s) 106, 403
MseI TTAA 2 cut(s) 179, 252
MspA1I CMGCKG 1 cut(s) 350
MspI CCGG 1 cut(s) 74
MspR9I CCNGG 1 cut(s) 74
MwoI GCNNNNNNNGC 1 cut(s) 101
NciI CCSGG 1 cut(s) 74
NdeII GATC 3 cut(s) 16, 236, 292
NlaIII CATG 2 cut(s) 86, 325
NlaIV GGNNCC 1 cut(s) 387
NsiI ATGCAT 2 cut(s) 106, 403
PfeI GAWTC 1 cut(s) 305
PleI GAGTC 1 cut(s) 266
PpsI GAGTC 1 cut(s) 266
PsiI TTATAA 1 cut(s) 422
PspN4I GGNNCC 1 cut(s) 387
PsuI RGATCY 1 cut(s) 16
PvuII CAGCTG 1 cut(s) 350
RsaI GTAC 3 cut(s) 54, 160, 387
RsaNI GTAC 3 cut(s) 53, 159, 386
SaqAI TTAA 2 cut(s) 179, 252
Sau3AI GATC 3 cut(s) 16, 236, 292
SchI GAGTC 1 cut(s) 266
ScrFI CCNGG 1 cut(s) 74
SetI ASST 8 cut(s) 43, 97, 201, 280, 331, 352, 387, 391
SfaNI GCATC 1 cut(s) 113
Sse9I AATT 5 cut(s) 25, 118, 267, 371, 423
StyD4I CCNGG 1 cut(s) 72
TaqI TCGA 1 cut(s) 148
TasI AATT 5 cut(s) 25, 118, 267, 371, 423
TatI WGTACW 2 cut(s) 52, 158
TfiI GAWTC 1 cut(s) 305
Tru1I TTAA 2 cut(s) 179, 252
Tru9I TTAA 2 cut(s) 179, 252
TspDTI ATGAA 3 cut(s) 18, 99, 382
XapI RAATTY 2 cut(s) 25, 371
Zsp2I ATGCAT 2 cut(s) 106, 403
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.