Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000002

Orthogroup ID

OG0001454

Physical Location & Seq

Genomic Coordinates Reverse (-)

83467953 .. 83474746

Gene Structure 6794 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_2G00145610.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1632 bp

ATGTCATACTCAGAACTTGAAGTTGGTGCAGATGATGAGGAAGTTCTGAATAAAATTATCGATTCTTTGACCTCTCTTGCTAATCCAAATGAAAATCAACCGTTAAAGCAAGAAGCAAATAAGATTTCACTGAGGGTTGGTAAAGTCCAGGATAGTGGAGCTAAGAAGGAAAATGACAAGAAAAAGAAGGTTGGGATTCTAATTATTGGAGCAGGCCGGGTCTGTCAACCAGCTGCTGAAATGCTAGCATCAATTGGTGGAATGTCTTCCCAACAATGGTATAAAACATGCATGGAAGGTGACTTTGAGGAAGACATTGATGTGCAAGTTACTGTTGCATCTCTCTATCTAAAGGATGCTGAAGAGATCACTGAAGGTATTCCAAATGCAATTCCAGTTCAACTTGATGTGTCAGACACTAGTACTCTTCATAAGTATATATCTGAGGCTGAAGTTGTTATAAGCTTACTGCCTGCTTTTTGTCACGTTACTGTAGCAACTGCATGTATTGAGCTCAAAAAGCACCTTGTCACCGCTAGCTATGTTGATGATGCCATGTCAGAGCTAAATGAAAAGGCAAAGACTGCCGGTATTACAATTCTTGGTGAGCTGGGCTTGGACCCTGGGATAGATCACATGATGGCGATGAAGATGATCAACCAAGCACATGTTCGTAAGGGGAAAATAAAGTCTTTTACTTCTTACTGCGGTGGACTCCCATCCCCAGCTGCAGCAAACAATCCTCTAGCATATAAGTTCAGCTGGAGTCCTGCAGGAGCTATCCGAGCTGGATGCAATCCTGCCACTTATAAATCTAATGGCGAAATCTTAAATGTTGAAGGGAAGAATCTATATGATTCAGCTGTGAAACATCGGATACCTGACCTTCCAGCTTTTGCCTTGGAATGCCTTCCAAATCGTAATTCACTAGTTTACGGGGACTTGTATGGCATTGGAAAGGAAGCATCAACCGTCTTTCGTGGAACCCTTCGCTATGAAGGGTTTGGCCAAATTATGGGAACACTGTCAAGAATTGGTTTATTTGAATCCGAACCTCATCCACTTTTTAAGGATGGAAAGAAACCAACATTCCGGATGTTCTTGTCCGAACTTCTAAAAATCAAAAGTGAAGAAGTGGATGGATCTCTGAGAGGAGAGAAAGCCATCAGCGAAAGGATTATCAATCTTGGATACAGCAAACAGCAAGAAACTGCAGTACGGGCAGCTAAAACTATCATATTTTTGGGACTGCATGAGCAGAAAGAAATTCCTGCCTCCTGCAAAAGTGCTTTTGATGTCAGTTGTCTCCTCATGGAAGATAGGTTAGCATACACGAGCACAGAACAGGATATGGTACTTCTGCACCATGAAGTGGAGGTTGAGTTCCCAGATTCTAAACTCACAGAGAAACAGAGTGCCACTTTACTGGAATTTGGGACGATGAGGAATGGTAAAATGATCACCGCCATGGCTTTCACTGTTGGTATCCCAGCAGCCATTGGAGCTCTGCTCCTACTTGGAAACAAGATCAAAACAAGAGGTGTCTTAAGGCCCCTTGAACCTGAAGTATATGTCCCAGCCATGGATATCATACAGGCATATGGTATCAAGGTAATGGAGAAGGTCGAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004753 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006082 GO:0006091 GO:0006520 GO:0006553 GO:0006807 GO:0008150 GO:0008152 GO:0008652 GO:0009058 GO:0009066 GO:0009067 GO:0009085 GO:0009987 GO:0016053 GO:0016491 GO:0016645 GO:0016646 GO:0019752 GO:0019878 GO:0043436 GO:0044237 GO:0044238 GO:0044249 GO:0044281 GO:0044283 GO:0044424 GO:0044464 GO:0046394 GO:0055114 GO:0071704 GO:1901564 GO:1901566 GO:1901576 GO:1901605 GO:1901607

KEGG Pathways

Metabolic & Signaling

ko00300 ko00310 ko01100 ko01110 ko01130 ko01230 map00300 map00310 map01100 map01110 map01130 map01230

Pfam Domains

Protein Families

AlaDh_PNT_N Saccharop_dh_N Sacchrp_dh_C Sacchrp_dh_NADP

Protein Analysis

543

Amino Acids

59.35

Weight (kDa)

5.59

Isoelectric Point (pI)

37.05

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Sacchrp_dh_NADP	PF03435	66 - 201	4.9e-19	Saccharopine dehydrogenase NADP binding domain
Sacchrp_dh_C	PF16653	205 - 536	1.7e-80	Saccharopine dehydrogenase C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0001454)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G33150 AT4G33150 AT4G33150 AT4G33150
fragaria_vesca	FvH4_1g09640 FvH4_1g09640 FvH4_1g09640 FvH4_1g09640 FvH4_1g09640 FvH4_1g09640 FvH4_1g09640 FvH4_1g09640
malus_domestica	MD02G1105000.v1.1 MD02G1105300.v1.1
prunus_persica	Prupe.7G189800_v2.0.a1 Prupe.7G189800_v2.0.a1 Prupe.7G189800_v2.0.a1
pyrus_communis	pycom02g08340
rosa_chinensis	RchiOBHm_Chr2g0096481 RchiOBHm_Chr2g0121231 RchiOBHm_Chr2g0121241 RchiOBHm_Chr2g0169881 RchiOBHm_Chr2g0169891
rosa_laevigata	RLG00000016643
rosa_multiflora	Rmu_sc0004096.1_g000015 Rmu_sc0018708.1_g000006
rosa_roxburghii	Rroxscaffold_176G00431240 Rroxscaffold_2G00145610 Rroxscaffold_7G00171930
rosa_rugosa	Rorug02G0058100
rosa_samantha	Rh1AG160500 Rh1AG160600 Rh1CG150200 Rh2AG105000 Rh2AG293500 Rh2AG293600 Rh2BG107100 Rh2CG108900 Rh2CG232200 Rh2DG108100 Rh2DG317400 Rh2DG317500 Rh3AG001100 Rh3BG000800 Rh3CG000800 Rh3DG001000 Rh4AG204900 Rh7AG127200
rosa_wichuraiana	Rw2G008110 Rw2G016820 Rw6G021060 Rw6G033110

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	461, 810
AccB7I	CCANNNNNTGG	2 cut(s)	1015, 1372
AccIII	TCCGGA	1 cut(s)	1092
AciI	CCGC	3 cut(s)	534, 708, 1464
AclWI	GGATC	1 cut(s)	1150
AcoI	YGGCCR	1 cut(s)	1006
AcsI	RAATTY	2 cut(s)	1266, 1430
AcuI	CTGAAG	4 cut(s)	381, 393, 471, 1584
AfaI	GTAC	3 cut(s)	424, 1218, 1356
AfiI	CCNNNNNNNGG	4 cut(s)	276, 1015, 1372, 1582
AflII	CTTAAG	1 cut(s)	1546
AflIII	ACRYGT	1 cut(s)	667
AgsI	TTSAA	5 cut(s)	20, 401, 839, 1046, 1559
AhlI	ACTAGT	2 cut(s)	419, 928
AjnI	CCWGG	2 cut(s)	147, 622
AjuI	GAANNNNNNNTTGG	5 cut(s)	38, 654, 686, 907, 939
AloI	GAACNNNNNNTCC	2 cut(s)	1367, 1399
Alw21I	GWGCWC	3 cut(s)	516, 1340, 1507
Alw26I	GTCTC	1 cut(s)	1310
AlwI	GGATC	1 cut(s)	1150
AlwNI	CAGNNNCTG	1 cut(s)	236
Aor13HI	TCCGGA	1 cut(s)	1092
AoxI	GGCC	3 cut(s)	214, 1006, 1550
ApeKI	GCWGC	5 cut(s)	233, 728, 731, 1223, 1493
ApoI	RAATTY	2 cut(s)	1266, 1430
Asp700I	GAANNNNTTC	3 cut(s)	265, 378, 909
AspS9I	GGNCC	2 cut(s)	619, 1551
AsuC2I	CCSGG	1 cut(s)	218
AsuHPI	GGTGA	4 cut(s)	311, 523, 617, 1453
AsuNHI	GCTAGC	2 cut(s)	244, 536
AvaII	GGWCC	1 cut(s)	619
BalI	TGGCCA	1 cut(s)	1008
BanII	GRGCYC	2 cut(s)	516, 1507
BauI	CACGAG	1 cut(s)	1333
BbsI	GAAGAC	2 cut(s)	258, 318
Bbv12I	GWGCWC	3 cut(s)	516, 1340, 1507
BbvI	GCAGC	5 cut(s)	220, 715, 743, 1235, 1505
BccI	CCATC	5 cut(s)	634, 727, 1067, 1133, 1172
BcgI	CGANNNNNNTGC	2 cut(s)	774, 808
BciT130I	CCWGG	2 cut(s)	149, 624
BciVI	GTATCC	3 cut(s)	870, 1184, 1496
BclI	TGATCA	2 cut(s)	654, 1458
BcnI	CCSGG	1 cut(s)	218
BcoDI	GTCTC	1 cut(s)	1310
BcuI	ACTAGT	2 cut(s)	419, 928
BfaI	CTAG	5 cut(s)	245, 420, 537, 746, 929
BfmI	CTRYAG	4 cut(s)	492, 729, 771, 1212
BfrI	CTTAAG	1 cut(s)	1546
BfuI	GTATCC	3 cut(s)	870, 1184, 1496
BisI	GCNGC	5 cut(s)	234, 729, 732, 1224, 1494
BlsI	GCNGC	5 cut(s)	235, 730, 733, 1225, 1495
BmcAI	AGTACT	1 cut(s)	424
Bme1390I	CCNGG	3 cut(s)	149, 218, 624
Bme18I	GGWCC	1 cut(s)	619
BmgT120I	GGNCC	2 cut(s)	619, 1551
BmiI	GGNNCC	3 cut(s)	621, 985, 1553
BmrFI	CCNGG	3 cut(s)	149, 218, 624
BmsI	GCATC	6 cut(s)	257, 346, 347, 541, 782, 974
BmtI	GCTAGC	2 cut(s)	248, 540
BpiI	GAAGAC	2 cut(s)	258, 318
BplI	GAGNNNNNCTC	2 cut(s)	1494, 1526
BpmI	CTGGAG	1 cut(s)	784
BpuMI	CCSGG	1 cut(s)	218
Bsa29I	ATCGAT	1 cut(s)	60
BsaJI	CCNNGG	5 cut(s)	622, 623, 900, 1467, 1581
BsaWI	WCCGGW	1 cut(s)	1092
BsaXI	ACNNNNNCTCC	2 cut(s)	1367, 1397
Bsc4I	CCNNNNNNNGG	4 cut(s)	276, 1015, 1372, 1582
Bse118I	RCCGGY	1 cut(s)	587
Bse1I	ACTGG	2 cut(s)	395, 1431
BseAI	TCCGGA	1 cut(s)	1092
BseBI	CCWGG	2 cut(s)	149, 624
BseCI	ATCGAT	1 cut(s)	60
BseDI	CCNNGG	5 cut(s)	622, 623, 900, 1467, 1581
BseGI	GGATG	7 cut(s)	361, 719, 797, 1057, 1078, 1101, 1144
BseLI	CCNNNNNNNGG	4 cut(s)	276, 1015, 1372, 1582
BseMII	CTCAG	4 cut(s)	24, 122, 435, 1139
BseNI	ACTGG	2 cut(s)	395, 1431
BseRI	GAGGAG	2 cut(s)	1167, 1298
BseXI	GCAGC	5 cut(s)	220, 715, 743, 1235, 1505
BseYI	CCCAGC	4 cut(s)	610, 724, 1489, 1576
BsgI	GTGCAG	2 cut(s)	48, 1346
BshFI	GGCC	3 cut(s)	216, 1008, 1552
BshVI	ATCGAT	1 cut(s)	60
BsiHKAI	GWGCWC	3 cut(s)	516, 1340, 1507
BsiSI	CCGG	3 cut(s)	217, 588, 1093
BslFI	GGGAC	4 cut(s)	953, 1260, 1450, 1559
BslI	CCNNNNNNNGG	4 cut(s)	276, 1015, 1372, 1582
BsmAI	GTCTC	1 cut(s)	1310
BsmFI	GGGAC	4 cut(s)	953, 1260, 1450, 1559
BsmI	GAATGC	1 cut(s)	911
BsnI	GGCC	3 cut(s)	216, 1008, 1552
Bsp1286I	GDGCHC	3 cut(s)	516, 1340, 1507
Bsp13I	TCCGGA	1 cut(s)	1092
Bsp143I	GATC	6 cut(s)	366, 631, 654, 1142, 1458, 1527
Bsp19I	CCATGG	2 cut(s)	1467, 1581
BspACI	CCGC	3 cut(s)	534, 708, 1464
BspANI	GGCC	3 cut(s)	216, 1008, 1552
BspCNI	CTCAG	4 cut(s)	23, 123, 436, 1140
BspDI	ATCGAT	1 cut(s)	60
BspEI	TCCGGA	1 cut(s)	1092
BspLI	GGNNCC	3 cut(s)	621, 985, 1553
BspMAI	CTGCAG	3 cut(s)	733, 775, 1216
BspOI	GCTAGC	2 cut(s)	248, 540
BspPI	GGATC	1 cut(s)	1150
BspTI	CTTAAG	1 cut(s)	1546
BsrFI	RCCGGY	1 cut(s)	587
BsrI	ACTGG	2 cut(s)	395, 1431
BssAI	RCCGGY	1 cut(s)	587
BssECI	CCNNGG	5 cut(s)	622, 623, 900, 1467, 1581
BssMI	GATC	6 cut(s)	366, 631, 654, 1142, 1458, 1527
BssSI	CACGAG	1 cut(s)	1333
BssT1I	CCWWGG	3 cut(s)	900, 1467, 1581
Bst2BI	CACGAG	1 cut(s)	1333
Bst2UI	CCWGG	2 cut(s)	149, 624
Bst4CI	ACNGT	6 cut(s)	102, 334, 493, 973, 1026, 1480
Bst6I	CTCTTC	2 cut(s)	357, 432
BstAFI	CTTAAG	1 cut(s)	1546
BstAPI	GCANNNNNTGC	1 cut(s)	584
BstC8I	GCNNGC	4 cut(s)	214, 246, 474, 538
BstDEI	CTNAG	5 cut(s)	10, 131, 162, 444, 1148
BstDSI	CCRYGG	2 cut(s)	1467, 1581
BstF5I	GGATG	7 cut(s)	361, 719, 797, 1057, 1078, 1101, 1144
BstKTI	GATC	6 cut(s)	369, 634, 657, 1145, 1461, 1530
BstMAI	GTCTC	1 cut(s)	1310
BstMBI	GATC	6 cut(s)	366, 631, 654, 1142, 1458, 1527
BstMWI	GCNNNNNNNGC	5 cut(s)	520, 584, 785, 1220, 1502
BstNI	CCWGG	2 cut(s)	149, 624
BstNSI	RCATGY	3 cut(s)	291, 507, 671
BstSCI	CCNGG	3 cut(s)	147, 216, 622
BstSFI	CTRYAG	4 cut(s)	492, 729, 771, 1212
BstV1I	GCAGC	5 cut(s)	220, 715, 743, 1235, 1505
BstV2I	GAAGAC	2 cut(s)	258, 318
BstX2I	RGATCY	1 cut(s)	1142
BstXI	CCANNNNNNTGG	2 cut(s)	155, 1426
BstYI	RGATCY	1 cut(s)	1142
Bsu15I	ATCGAT	1 cut(s)	60
BsuI	GTATCC	3 cut(s)	870, 1184, 1496
BsuRI	GGCC	3 cut(s)	216, 1008, 1552
BsuTUI	ATCGAT	1 cut(s)	60
BtgI	CCRYGG	2 cut(s)	1467, 1581
BtgZI	GCGATG	1 cut(s)	659
BtsCI	GGATG	7 cut(s)	361, 719, 797, 1057, 1078, 1101, 1144
BtsIMutI	CAGTG	4 cut(s)	128, 369, 1022, 1476
Cac8I	GCNNGC	4 cut(s)	214, 246, 474, 538
CaiI	CAGNNNCTG	1 cut(s)	236
Cfr10I	RCCGGY	1 cut(s)	587
Cfr13I	GGNCC	2 cut(s)	619, 1551
ClaI	ATCGAT	1 cut(s)	60
Csp6I	GTAC	3 cut(s)	423, 1217, 1355
CviQI	GTAC	3 cut(s)	423, 1217, 1355
DdeI	CTNAG	5 cut(s)	10, 131, 162, 444, 1148
DpnI	GATC	6 cut(s)	368, 633, 656, 1144, 1460, 1529
DpnII	GATC	6 cut(s)	366, 631, 654, 1142, 1458, 1527
EaeI	YGGCCR	1 cut(s)	1006
Eam1104I	CTCTTC	2 cut(s)	357, 432
EarI	CTCTTC	2 cut(s)	357, 432
Ecl136II	GAGCTC	2 cut(s)	514, 1505
Eco130I	CCWWGG	3 cut(s)	900, 1467, 1581
Eco24I	GRGCYC	2 cut(s)	516, 1507
Eco32I	GATATC	1 cut(s)	1588
Eco47I	GGWCC	1 cut(s)	619
Eco53kI	GAGCTC	2 cut(s)	514, 1505
Eco57I	CTGAAG	4 cut(s)	381, 393, 471, 1584
EcoICRI	GAGCTC	2 cut(s)	514, 1505
EcoO109I	RGGNCCY	1 cut(s)	1551
EcoRII	CCWGG	2 cut(s)	147, 622
EcoRV	GATATC	1 cut(s)	1588
EcoT14I	CCWWGG	3 cut(s)	900, 1467, 1581
EcoT22I	ATGCAT	1 cut(s)	293
EcoT38I	GRGCYC	2 cut(s)	516, 1507
ErhI	CCWWGG	3 cut(s)	900, 1467, 1581
FaqI	GGGAC	4 cut(s)	953, 1260, 1450, 1559
FauNDI	CATATG	1 cut(s)	1600
FbaI	TGATCA	2 cut(s)	654, 1458
Fnu4HI	GCNGC	5 cut(s)	234, 729, 732, 1224, 1494
FokI	GGATG	7 cut(s)	368, 706, 804, 1044, 1085, 1108, 1151
FriOI	GRGCYC	2 cut(s)	516, 1507
Fsp4HI	GCNGC	5 cut(s)	234, 729, 732, 1224, 1494
FspBI	CTAG	5 cut(s)	245, 420, 537, 746, 929
GluI	GCNGC	5 cut(s)	234, 729, 732, 1224, 1494
GsaI	CCCAGC	4 cut(s)	614, 728, 1493, 1580
GsuI	CTGGAG	1 cut(s)	784
HaeIII	GGCC	3 cut(s)	216, 1008, 1552
HapII	CCGG	3 cut(s)	217, 588, 1093
HincII	GTYRAC	1 cut(s)	227
HindII	GTYRAC	1 cut(s)	227
HindIII	AAGCTT	1 cut(s)	463
HinfI	GANTC	8 cut(s)	62, 196, 714, 766, 847, 857, 1046, 1391
HpaII	CCGG	3 cut(s)	217, 588, 1093
HphI	GGTGA	4 cut(s)	311, 523, 617, 1453
Hpy166II	GTNNAC	3 cut(s)	227, 713, 934
Hpy188III	TCNNGA	2 cut(s)	1029, 1093
Hpy8I	GTNNAC	3 cut(s)	227, 713, 934
HpyCH4III	ACNGT	6 cut(s)	102, 334, 493, 973, 1026, 1480
HpyCH4IV	ACGT	1 cut(s)	486
HpyF10VI	GCNNNNNNNGC	5 cut(s)	520, 584, 785, 1220, 1502
HpyF3I	CTNAG	5 cut(s)	10, 131, 162, 444, 1148
HpySE526I	ACGT	1 cut(s)	486
Kpn2I	TCCGGA	1 cut(s)	1092
Ksp22I	TGATCA	2 cut(s)	654, 1458
Kzo9I	GATC	6 cut(s)	366, 631, 654, 1142, 1458, 1527
LmnI	GCTCC	5 cut(s)	158, 209, 776, 1502, 1515
Lsp1109I	GCAGC	5 cut(s)	220, 715, 743, 1235, 1505
LweI	GCATC	6 cut(s)	257, 346, 347, 541, 782, 974
MaeI	CTAG	5 cut(s)	245, 420, 537, 746, 929
MaeII	ACGT	1 cut(s)	486
MaeIII	GTNAC	5 cut(s)	299, 328, 482, 487, 529
MalI	GATC	6 cut(s)	368, 633, 656, 1144, 1460, 1529
MboI	GATC	6 cut(s)	366, 631, 654, 1142, 1458, 1527
MboII	GAAGA	8 cut(s)	258, 323, 374, 419, 661, 856, 1142, 1328
MfeI	CAATTG	1 cut(s)	252
MflI	RGATCY	1 cut(s)	1142
MhlI	GDGCHC	3 cut(s)	516, 1340, 1507
MlsI	TGGCCA	1 cut(s)	1008
MluNI	TGGCCA	1 cut(s)	1008
MlyI	GAGTC	2 cut(s)	708, 775
Mox20I	TGGCCA	1 cut(s)	1008
Mph1103I	ATGCAT	1 cut(s)	293
MroI	TCCGGA	1 cut(s)	1092
MroXI	GAANNNNTTC	3 cut(s)	265, 378, 909
MscI	TGGCCA	1 cut(s)	1008
MseI	TTAA	4 cut(s)	104, 830, 1068, 1547
MslI	CAYNNNNRTG	2 cut(s)	320, 1466
Msp20I	TGGCCA	1 cut(s)	1008
MspA1I	CMGCKG	4 cut(s)	233, 728, 762, 863
MspCI	CTTAAG	1 cut(s)	1546
MspI	CCGG	3 cut(s)	217, 588, 1093
MspR9I	CCNGG	3 cut(s)	149, 218, 624
MunI	CAATTG	1 cut(s)	252
Mva1269I	GAATGC	1 cut(s)	911
MvaI	CCWGG	2 cut(s)	149, 624
MwoI	GCNNNNNNNGC	5 cut(s)	520, 584, 785, 1220, 1502
NciI	CCSGG	1 cut(s)	218
NcoI	CCATGG	2 cut(s)	1467, 1581
NdeI	CATATG	1 cut(s)	1600
NdeII	GATC	6 cut(s)	366, 631, 654, 1142, 1458, 1527
NheI	GCTAGC	2 cut(s)	244, 536
NlaIV	GGNNCC	3 cut(s)	621, 985, 1553
NmuCI	GTSAC	3 cut(s)	299, 482, 529
NsiI	ATGCAT	1 cut(s)	293
NspI	RCATGY	3 cut(s)	291, 507, 671
PasI	CCCWGGG	1 cut(s)	623
PciI	ACATGT	1 cut(s)	667
PctI	GAATGC	1 cut(s)	911
PdmI	GAANNNNTTC	3 cut(s)	265, 378, 909
PfeI	GAWTC	6 cut(s)	62, 196, 847, 857, 1046, 1391
PflMI	CCANNNNNTGG	2 cut(s)	1015, 1372
PfoI	TCCNGGA	1 cut(s)	147
PkrI	GCNGC	5 cut(s)	235, 730, 733, 1225, 1495
PleI	GAGTC	2 cut(s)	708, 774
PpsI	GAGTC	2 cut(s)	708, 774
PscI	ACATGT	1 cut(s)	667
PsiI	TTATAA	2 cut(s)	461, 810
Psp124BI	GAGCTC	2 cut(s)	516, 1507
Psp6I	CCWGG	2 cut(s)	147, 622
PspFI	CCCAGC	4 cut(s)	610, 724, 1489, 1576
PspGI	CCWGG	2 cut(s)	147, 622
PspN4I	GGNNCC	3 cut(s)	621, 985, 1553
PspPI	GGNCC	2 cut(s)	619, 1551
PstI	CTGCAG	3 cut(s)	733, 775, 1216
PstNI	CAGNNNCTG	1 cut(s)	236
PsuI	RGATCY	1 cut(s)	1142
PvuII	CAGCTG	4 cut(s)	233, 728, 762, 863
RsaI	GTAC	3 cut(s)	424, 1218, 1356
RsaNI	GTAC	3 cut(s)	423, 1217, 1355
RseI	CAYNNNNRTG	2 cut(s)	320, 1466
SacI	GAGCTC	2 cut(s)	516, 1507
SaqAI	TTAA	4 cut(s)	104, 830, 1068, 1547
SatI	GCNGC	5 cut(s)	234, 729, 732, 1224, 1494
Sau3AI	GATC	6 cut(s)	366, 631, 654, 1142, 1458, 1527
Sau96I	GGNCC	2 cut(s)	619, 1551
SbfI	CCTGCAGG	1 cut(s)	775
ScaI	AGTACT	1 cut(s)	424
SchI	GAGTC	2 cut(s)	708, 775
ScrFI	CCNGG	3 cut(s)	149, 218, 624
SdaI	CCTGCAGG	1 cut(s)	775
SduI	GDGCHC	3 cut(s)	516, 1340, 1507
SfaNI	GCATC	6 cut(s)	257, 346, 347, 541, 782, 974
SfcI	CTRYAG	4 cut(s)	492, 729, 771, 1212
SinI	GGWCC	1 cut(s)	619
SmiMI	CAYNNNNRTG	2 cut(s)	320, 1466
SmlI	CTYRAG	1 cut(s)	1546
SmoI	CTYRAG	1 cut(s)	1546
SpeI	ACTAGT	2 cut(s)	419, 928
Sse8387I	CCTGCAGG	1 cut(s)	775
SsiI	CCGC	3 cut(s)	534, 708, 1464
SspMI	CTAG	5 cut(s)	245, 420, 537, 746, 929
SstI	GAGCTC	2 cut(s)	516, 1507
StyD4I	CCNGG	3 cut(s)	147, 216, 622
StyI	CCWWGG	3 cut(s)	900, 1467, 1581
TaaI	ACNGT	6 cut(s)	102, 334, 493, 973, 1026, 1480
TaiI	ACGT	1 cut(s)	489
TaqI	TCGA	2 cut(s)	60, 1626
TatI	WGTACW	1 cut(s)	422
TfiI	GAWTC	6 cut(s)	62, 196, 847, 857, 1046, 1391
Tru1I	TTAA	4 cut(s)	104, 830, 1068, 1547
Tru9I	TTAA	4 cut(s)	104, 830, 1068, 1547
TscAI	CASTG	4 cut(s)	135, 376, 1029, 1483
TseFI	GTSAC	3 cut(s)	299, 482, 529
TseI	GCWGC	5 cut(s)	233, 728, 731, 1223, 1493
Tsp45I	GTSAC	3 cut(s)	299, 482, 529
TspDTI	ATGAA	6 cut(s)	105, 419, 585, 662, 1011, 1383
TspRI	CASTG	4 cut(s)	135, 376, 1029, 1483
Van91I	CCANNNNNTGG	2 cut(s)	1015, 1372
Vha464I	CTTAAG	1 cut(s)	1546
VpaK11BI	GGWCC	1 cut(s)	619
XapI	RAATTY	2 cut(s)	1266, 1430
XceI	RCATGY	3 cut(s)	291, 507, 671
XmnI	GAANNNNTTC	3 cut(s)	265, 378, 909
XspI	CTAG	5 cut(s)	245, 420, 537, 746, 929
ZrmI	AGTACT	1 cut(s)	424
Zsp2I	ATGCAT	1 cut(s)	293

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.