Rw6G021060

Alpha-aminoadipic semialdehyde

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr6
Physical Location & Seq
Reverse (-)
42089501 .. 42090269
769 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw6G021060.1

Sequence Viewer

Length: 411 bp
ATGGTTGAACACAAAGATCCCAAAAATTCATTTGACAAAGCTGATTATTATGTACATCCAGAACACTACAACCCGGTTTTCCATGAAAATATAGCTCCTTATGCATCTGTAATCGTGAATTGTATGTATTGGGAGAAAAGATATCCTCGATTATTGAGTACAAAGCAGTTTCAAGATTTAACAAGGAAAGGATGTAAGCTTGTTGGTATCTCTGATATAACTTGTGATATAGGGGGATCAATAGAGTTTGTTAATCAAACCACACAAATTGACTCACCTTTCTTCAGATATGATCCAATAAAAGATTCTTACCATCAGGACATGGAAGGTGATGGTGTGGTATGTTCAGCTGTGGACATTCTTCCAACAGAATTTGCAAAAGAGGCAATTGAAGTATGGTCATGGCTCTAG

Protein Analysis

136

Amino Acids

15.77

Weight (kDa)

4.96

Isoelectric Point (pI)

49.95

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 3 cut(s) 11, 244, 287
AcsI RAATTY 2 cut(s) 25, 371
AcuI CTGAAG 1 cut(s) 268
AfaI GTAC 2 cut(s) 54, 160
AgsI TTSAA 3 cut(s) 8, 173, 392
AjuI GAANNNNNNNTTGG 2 cut(s) 289, 321
AluBI AGCT 4 cut(s) 41, 95, 199, 350
AluI AGCT 4 cut(s) 41, 95, 199, 350
AlwI GGATC 3 cut(s) 11, 244, 287
ApoI RAATTY 2 cut(s) 25, 371
AsuC2I CCSGG 1 cut(s) 74
AsuHPI GGTGA 2 cut(s) 267, 341
BccI CCATC 2 cut(s) 321, 326
BcnI CCSGG 1 cut(s) 74
BfaI CTAG 1 cut(s) 409
Bme1390I CCNGG 1 cut(s) 74
BmrFI CCNGG 1 cut(s) 74
BmsI GCATC 1 cut(s) 113
BpuMI CCSGG 1 cut(s) 74
BseGI GGATG 2 cut(s) 55, 197
BsiSI CCGG 1 cut(s) 74
Bsp1407I TGTACA 1 cut(s) 52
Bsp143I GATC 3 cut(s) 16, 236, 292
BspPI GGATC 3 cut(s) 11, 244, 287
BsrGI TGTACA 1 cut(s) 52
BssMI GATC 3 cut(s) 16, 236, 292
BstAUI TGTACA 1 cut(s) 52
BstF5I GGATG 2 cut(s) 55, 197
BstKTI GATC 3 cut(s) 19, 239, 295
BstMBI GATC 3 cut(s) 16, 236, 292
BstMWI GCNNNNNNNGC 2 cut(s) 101, 383
BstSCI CCNGG 1 cut(s) 72
BstX2I RGATCY 1 cut(s) 16
BstYI RGATCY 1 cut(s) 16
BtsCI GGATG 2 cut(s) 55, 197
Csp6I GTAC 2 cut(s) 53, 159
CspCI CAANNNNNGTGG 2 cut(s) 250, 285
CviAII CATG 3 cut(s) 83, 322, 402
CviJI RGCY 5 cut(s) 41, 95, 199, 350, 406
CviKI_1 RGCY 5 cut(s) 41, 95, 199, 350, 406
CviQI GTAC 2 cut(s) 53, 159
DpnI GATC 3 cut(s) 18, 238, 294
DpnII GATC 3 cut(s) 16, 236, 292
Eco32I GATATC 1 cut(s) 143
Eco57I CTGAAG 1 cut(s) 268
EcoRV GATATC 1 cut(s) 143
EcoT22I ATGCAT 1 cut(s) 106
FaeI CATG 3 cut(s) 86, 325, 405
FatI CATG 3 cut(s) 82, 321, 401
FokI GGATG 2 cut(s) 42, 204
FspBI CTAG 1 cut(s) 409
HapII CCGG 1 cut(s) 74
Hin1II CATG 3 cut(s) 86, 325, 405
HindIII AAGCTT 1 cut(s) 197
HinfI GANTC 2 cut(s) 272, 305
HpaII CCGG 1 cut(s) 74
HphI GGTGA 2 cut(s) 267, 341
Hpy166II GTNNAC 1 cut(s) 355
Hpy188I TCNGA 2 cut(s) 214, 287
Hpy188III TCNNGA 4 cut(s) 59, 115, 173, 317
Hpy8I GTNNAC 1 cut(s) 355
HpyAV CCTTC 1 cut(s) 320
HpyCH4V TGCA 2 cut(s) 104, 377
HpyF10VI GCNNNNNNNGC 2 cut(s) 101, 383
Hsp92II CATG 3 cut(s) 86, 325, 405
Kzo9I GATC 3 cut(s) 16, 236, 292
LmnI GCTCC 1 cut(s) 100
LpnPI CCDG 3 cut(s) 72, 87, 302
LweI GCATC 1 cut(s) 113
MaeI CTAG 1 cut(s) 409
MalI GATC 3 cut(s) 18, 238, 294
MboI GATC 3 cut(s) 16, 236, 292
MboII GAAGA 2 cut(s) 274, 353
MfeI CAATTG 1 cut(s) 387
MflI RGATCY 1 cut(s) 16
MluCI AATT 5 cut(s) 25, 118, 267, 371, 387
MlyI GAGTC 1 cut(s) 266
MmeI TCCRAC 1 cut(s) 389
MnlI CCTC 2 cut(s) 156, 376
Mph1103I ATGCAT 1 cut(s) 106
MseI TTAA 2 cut(s) 179, 252
MspA1I CMGCKG 1 cut(s) 350
MspI CCGG 1 cut(s) 74
MspR9I CCNGG 1 cut(s) 74
MunI CAATTG 1 cut(s) 387
MwoI GCNNNNNNNGC 2 cut(s) 101, 383
NciI CCSGG 1 cut(s) 74
NdeII GATC 3 cut(s) 16, 236, 292
NlaIII CATG 3 cut(s) 86, 325, 405
NsiI ATGCAT 1 cut(s) 106
PfeI GAWTC 1 cut(s) 305
PleI GAGTC 1 cut(s) 266
PpsI GAGTC 1 cut(s) 266
PsuI RGATCY 1 cut(s) 16
PvuII CAGCTG 1 cut(s) 350
RsaI GTAC 2 cut(s) 54, 160
RsaNI GTAC 2 cut(s) 53, 159
SaqAI TTAA 2 cut(s) 179, 252
Sau3AI GATC 3 cut(s) 16, 236, 292
SchI GAGTC 1 cut(s) 266
ScrFI CCNGG 1 cut(s) 74
SetI ASST 6 cut(s) 43, 97, 201, 280, 331, 352
SfaNI GCATC 1 cut(s) 113
Sse9I AATT 5 cut(s) 25, 118, 267, 371, 387
SspMI CTAG 1 cut(s) 409
StyD4I CCNGG 1 cut(s) 72
TaqI TCGA 1 cut(s) 148
TasI AATT 5 cut(s) 25, 118, 267, 371, 387
TatI WGTACW 2 cut(s) 52, 158
TfiI GAWTC 1 cut(s) 305
Tru1I TTAA 2 cut(s) 179, 252
Tru9I TTAA 2 cut(s) 179, 252
TspDTI ATGAA 2 cut(s) 18, 99
XapI RAATTY 2 cut(s) 25, 371
XspI CTAG 1 cut(s) 409
Zsp2I ATGCAT 1 cut(s) 106
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.