Transporter associated domain
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G00925 |
| fragaria_vesca | FvH4_3g24130 FvH4_3g24130 FvH4_3g24130 FvH4_3g24130 FvH4_3g24130 |
| rosa_chinensis | RchiOBHm_Chr5g0042791 RchiOBHm_Chr5g0042841 RchiOBHm_Chr5g0043091 RchiOBHm_Chr5g0043121 RchiOBHm_Chr5g0043141 |
| rosa_laevigata | RLG00000034152 RLG00000034154 RLG00000034159 RLG00000034161 RLG00000034162 RLG00000034165 |
| rosa_multiflora | Rmu_sc0000493.1_g000029 Rmu_sc0002079.1_g000002 Rmu_sc0004950.1_g000009 Rmu_sc0008148.1_g000050 Rmu_sc0027101.1_g000001 |
| rosa_roxburghii | Rroxscaffold_1G00037670 Rroxscaffold_1G00037710 Rroxscaffold_1G00037760 Rroxscaffold_1G00037830 Rroxscaffold_7G00212010 |
| rosa_rugosa | Rorug03G0298700 Rorug05G0204300 Rorug05G0204500 Rorug05G0276100 Rorug05G0308400 |
| rosa_samantha | Rh5AG289500 Rh5BG293600 Rh5BG293900 Rh5BG295600 Rh5BG295800 Rh5BG296100 Rh5CG290900 Rh5CG326200 Rh5DG303600 Rh5DG305300 Rh6AG419200 Rh6BG071100 |
| rosa_wichuraiana | Rw5G026820 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 177 |
| AciI | CCGC | 2 cut(s) | 36, 209 |
| AcsI | RAATTY | 1 cut(s) | 31 |
| AfaI | GTAC | 1 cut(s) | 165 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 165 |
| AgsI | TTSAA | 1 cut(s) | 5 |
| AluBI | AGCT | 1 cut(s) | 230 |
| AluI | AGCT | 1 cut(s) | 230 |
| ApeKI | GCWGC | 1 cut(s) | 227 |
| ApoI | RAATTY | 1 cut(s) | 31 |
| AspS9I | GGNCC | 1 cut(s) | 241 |
| AsuHPI | GGTGA | 1 cut(s) | 146 |
| AvaII | GGWCC | 1 cut(s) | 241 |
| BaeGI | GKGCMC | 1 cut(s) | 221 |
| BauI | CACGAG | 1 cut(s) | 220 |
| BbvI | GCAGC | 1 cut(s) | 239 |
| BfaI | CTAG | 3 cut(s) | 107, 231, 245 |
| BfmI | CTRYAG | 1 cut(s) | 90 |
| BisI | GCNGC | 2 cut(s) | 210, 228 |
| BlsI | GCNGC | 2 cut(s) | 211, 229 |
| Bme18I | GGWCC | 1 cut(s) | 241 |
| BmgT120I | GGNCC | 1 cut(s) | 241 |
| BmsI | GCATC | 1 cut(s) | 257 |
| BsaJI | CCNNGG | 1 cut(s) | 159 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 165 |
| BseDI | CCNNGG | 1 cut(s) | 159 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 165 |
| BseSI | GKGCMC | 1 cut(s) | 221 |
| BseXI | GCAGC | 1 cut(s) | 239 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 165 |
| BsmI | GAATGC | 1 cut(s) | 38 |
| Bsp1286I | GDGCHC | 1 cut(s) | 221 |
| BspACI | CCGC | 2 cut(s) | 36, 209 |
| BssECI | CCNNGG | 1 cut(s) | 159 |
| BssSI | CACGAG | 1 cut(s) | 220 |
| BssT1I | CCWWGG | 1 cut(s) | 159 |
| Bst2BI | CACGAG | 1 cut(s) | 220 |
| Bst4CI | ACNGT | 2 cut(s) | 91, 168 |
| BstDEI | CTNAG | 2 cut(s) | 25, 276 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 233 |
| BstNSI | RCATGY | 1 cut(s) | 57 |
| BstSFI | CTRYAG | 1 cut(s) | 90 |
| BstSLI | GKGCMC | 1 cut(s) | 221 |
| BstV1I | GCAGC | 1 cut(s) | 239 |
| Cfr13I | GGNCC | 1 cut(s) | 241 |
| Csp6I | GTAC | 1 cut(s) | 164 |
| CviAII | CATG | 2 cut(s) | 54, 58 |
| CviJI | RGCY | 4 cut(s) | 62, 230, 236, 275 |
| CviKI_1 | RGCY | 4 cut(s) | 62, 230, 236, 275 |
| CviQI | GTAC | 1 cut(s) | 164 |
| DdeI | CTNAG | 2 cut(s) | 25, 276 |
| Eco130I | CCWWGG | 1 cut(s) | 159 |
| Eco47I | GGWCC | 1 cut(s) | 241 |
| EcoRI | GAATTC | 1 cut(s) | 31 |
| EcoT14I | CCWWGG | 1 cut(s) | 159 |
| EcoT22I | ATGCAT | 1 cut(s) | 59 |
| ErhI | CCWWGG | 1 cut(s) | 159 |
| FaeI | CATG | 2 cut(s) | 57, 61 |
| FaiI | YATR | 5 cut(s) | 55, 59, 81, 191, 239 |
| FatI | CATG | 2 cut(s) | 53, 57 |
| FblI | GTMKAC | 1 cut(s) | 177 |
| Fnu4HI | GCNGC | 2 cut(s) | 210, 228 |
| Fsp4HI | GCNGC | 2 cut(s) | 210, 228 |
| FspBI | CTAG | 3 cut(s) | 107, 231, 245 |
| GluI | GCNGC | 2 cut(s) | 210, 228 |
| Hin1II | CATG | 2 cut(s) | 57, 61 |
| HincII | GTYRAC | 1 cut(s) | 198 |
| HindII | GTYRAC | 1 cut(s) | 198 |
| HinfI | GANTC | 2 cut(s) | 18, 155 |
| HphI | GGTGA | 1 cut(s) | 146 |
| Hpy166II | GTNNAC | 3 cut(s) | 51, 178, 198 |
| Hpy188I | TCNGA | 2 cut(s) | 44, 187 |
| Hpy188III | TCNNGA | 1 cut(s) | 15 |
| Hpy8I | GTNNAC | 3 cut(s) | 51, 178, 198 |
| HpyAV | CCTTC | 1 cut(s) | 39 |
| HpyCH4III | ACNGT | 2 cut(s) | 91, 168 |
| HpyCH4V | TGCA | 1 cut(s) | 57 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 233 |
| HpyF3I | CTNAG | 2 cut(s) | 25, 276 |
| Hsp92II | CATG | 2 cut(s) | 57, 61 |
| Lsp1109I | GCAGC | 1 cut(s) | 239 |
| LweI | GCATC | 1 cut(s) | 257 |
| MaeI | CTAG | 3 cut(s) | 107, 231, 245 |
| MboII | GAAGA | 2 cut(s) | 13, 122 |
| MhlI | GDGCHC | 1 cut(s) | 221 |
| MluCI | AATT | 3 cut(s) | 31, 99, 126 |
| MnlI | CCTC | 3 cut(s) | 115, 191, 216 |
| Mph1103I | ATGCAT | 1 cut(s) | 59 |
| MslI | CAYNNNNRTG | 2 cut(s) | 56, 62 |
| Mva1269I | GAATGC | 1 cut(s) | 38 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 233 |
| NlaIII | CATG | 2 cut(s) | 57, 61 |
| NsiI | ATGCAT | 1 cut(s) | 59 |
| NspI | RCATGY | 1 cut(s) | 57 |
| PctI | GAATGC | 1 cut(s) | 38 |
| PfeI | GAWTC | 2 cut(s) | 18, 155 |
| PkrI | GCNGC | 2 cut(s) | 211, 229 |
| PspPI | GGNCC | 1 cut(s) | 241 |
| RsaI | GTAC | 1 cut(s) | 165 |
| RsaNI | GTAC | 1 cut(s) | 164 |
| RseI | CAYNNNNRTG | 2 cut(s) | 56, 62 |
| SatI | GCNGC | 2 cut(s) | 210, 228 |
| Sau96I | GGNCC | 1 cut(s) | 241 |
| SduI | GDGCHC | 1 cut(s) | 221 |
| SetI | ASST | 4 cut(s) | 50, 165, 183, 232 |
| SfaNI | GCATC | 1 cut(s) | 257 |
| SfcI | CTRYAG | 1 cut(s) | 90 |
| SinI | GGWCC | 1 cut(s) | 241 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 56, 62 |
| Sse9I | AATT | 3 cut(s) | 31, 99, 126 |
| SsiI | CCGC | 2 cut(s) | 36, 209 |
| SspI | AATATT | 1 cut(s) | 141 |
| SspMI | CTAG | 3 cut(s) | 107, 231, 245 |
| StyI | CCWWGG | 1 cut(s) | 159 |
| TaaI | ACNGT | 2 cut(s) | 91, 168 |
| TasI | AATT | 3 cut(s) | 31, 99, 126 |
| TauI | GCSGC | 1 cut(s) | 212 |
| TfiI | GAWTC | 2 cut(s) | 18, 155 |
| TseI | GCWGC | 1 cut(s) | 227 |
| TspDTI | ATGAA | 2 cut(s) | 90, 162 |
| VpaK11BI | GGWCC | 1 cut(s) | 241 |
| XapI | RAATTY | 1 cut(s) | 31 |
| XceI | RCATGY | 1 cut(s) | 57 |
| XmiI | GTMKAC | 1 cut(s) | 177 |
| XspI | CTAG | 3 cut(s) | 107, 231, 245 |
| Zsp2I | ATGCAT | 1 cut(s) | 59 |