Plant lipid transfer protein / seed storage protein / trypsin-alpha amylase inhibitor domain family
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_3g40460 |
| malus_domestica | MD03G1052000.v1.1 MD03G1052100.v1.1 MD11G1054100.v1.1 MD11G1054200.v1.1 |
| prunus_persica | Prupe.6G041500_v2.0.a1 Prupe.6G041600_v2.0.a1 |
| pyrus_communis | pycom03g04140 pycom11g04390 pycom11g04400 |
| rosa_chinensis | RchiOBHm_Chr5g0073111 RchiOBHm_Chr5g0073121 |
| rosa_laevigata | RLG00000036365 RLG00000036368 |
| rosa_multiflora | Rmu_sc0005592.1_g000013 Rmu_sc0005592.1_g000021 Rmu_sc0005592.1_g000023 Rmu_sc0039876.1_g000001 |
| rosa_roxburghii | Rroxscaffold_1G00008060 Rroxscaffold_1G00008080 Rroxscaffold_1G00008090 |
| rosa_rugosa | Rorug05G0421200 Rorug05G0421400 |
| rosa_samantha | Rh5AG478300 Rh5BG498900 Rh5BG499000 Rh5BG499100 Rh5CG522100 Rh5CG522200 Rh5CG522300 Rh5DG511100 |
| rosa_wichuraiana | Rw5G044410 Rw5G044420 Rw5G044430 Rw5G044450 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 91 |
| AcoI | YGGCCR | 1 cut(s) | 3 |
| AfaI | GTAC | 1 cut(s) | 42 |
| AhlI | ACTAGT | 1 cut(s) | 43 |
| AjnI | CCWGG | 1 cut(s) | 5 |
| AoxI | GGCC | 1 cut(s) | 3 |
| AsuHPI | GGTGA | 1 cut(s) | 37 |
| BalI | TGGCCA | 1 cut(s) | 5 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 171, 203 |
| BciT130I | CCWGG | 1 cut(s) | 7 |
| BcuI | ACTAGT | 1 cut(s) | 43 |
| BfaI | CTAG | 2 cut(s) | 44, 56 |
| BfuAI | ACCTGC | 1 cut(s) | 91 |
| Bme1390I | CCNGG | 1 cut(s) | 7 |
| BmrFI | CCNGG | 1 cut(s) | 7 |
| BmsI | GCATC | 3 cut(s) | 92, 135, 184 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 138, 168 |
| Bse118I | RCCGGY | 1 cut(s) | 173 |
| BseBI | CCWGG | 1 cut(s) | 7 |
| BseGI | GGATG | 1 cut(s) | 126 |
| BseRI | GAGGAG | 1 cut(s) | 176 |
| BshFI | GGCC | 1 cut(s) | 5 |
| BsiSI | CCGG | 1 cut(s) | 174 |
| BsnI | GGCC | 1 cut(s) | 5 |
| BspANI | GGCC | 1 cut(s) | 5 |
| BspHI | TCATGA | 1 cut(s) | 190 |
| BspMI | ACCTGC | 1 cut(s) | 91 |
| BsrFI | RCCGGY | 1 cut(s) | 173 |
| BssAI | RCCGGY | 1 cut(s) | 173 |
| Bst2UI | CCWGG | 1 cut(s) | 7 |
| BstC8I | GCNNGC | 5 cut(s) | 16, 98, 155, 175, 229 |
| BstF5I | GGATG | 1 cut(s) | 126 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 11 |
| BstNI | CCWGG | 1 cut(s) | 7 |
| BstSCI | CCNGG | 1 cut(s) | 5 |
| BsuRI | GGCC | 1 cut(s) | 5 |
| BtsCI | GGATG | 1 cut(s) | 126 |
| BveI | ACCTGC | 1 cut(s) | 91 |
| Cac8I | GCNNGC | 5 cut(s) | 16, 98, 155, 175, 229 |
| CciI | TCATGA | 1 cut(s) | 190 |
| Cfr10I | RCCGGY | 1 cut(s) | 173 |
| Csp6I | GTAC | 1 cut(s) | 41 |
| CviAII | CATG | 2 cut(s) | 123, 191 |
| CviJI | RGCY | 3 cut(s) | 5, 18, 187 |
| CviKI_1 | RGCY | 3 cut(s) | 5, 18, 187 |
| CviQI | GTAC | 1 cut(s) | 41 |
| EaeI | YGGCCR | 1 cut(s) | 3 |
| EcoRII | CCWGG | 1 cut(s) | 5 |
| EcoT22I | ATGCAT | 1 cut(s) | 128 |
| FaeI | CATG | 2 cut(s) | 126, 194 |
| FaiI | YATR | 3 cut(s) | 72, 124, 192 |
| FatI | CATG | 2 cut(s) | 122, 190 |
| FokI | GGATG | 1 cut(s) | 113 |
| FspBI | CTAG | 2 cut(s) | 44, 56 |
| HaeIII | GGCC | 1 cut(s) | 5 |
| HapII | CCGG | 1 cut(s) | 174 |
| Hin1II | CATG | 2 cut(s) | 126, 194 |
| HinfI | GANTC | 2 cut(s) | 64, 118 |
| HpaII | CCGG | 1 cut(s) | 174 |
| HphI | GGTGA | 1 cut(s) | 37 |
| Hpy166II | GTNNAC | 1 cut(s) | 109 |
| Hpy188I | TCNGA | 1 cut(s) | 117 |
| Hpy188III | TCNNGA | 2 cut(s) | 191, 205 |
| Hpy8I | GTNNAC | 1 cut(s) | 109 |
| HpyCH4V | TGCA | 4 cut(s) | 14, 126, 197, 237 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 11 |
| Hsp92II | CATG | 2 cut(s) | 126, 194 |
| KroI | GCCGGC | 1 cut(s) | 173 |
| KroNI | GCCGGC | 1 cut(s) | 175 |
| LmnI | GCTCC | 1 cut(s) | 150 |
| LpnPI | CCDG | 4 cut(s) | 19, 86, 171, 187 |
| LweI | GCATC | 3 cut(s) | 92, 135, 184 |
| MaeI | CTAG | 2 cut(s) | 44, 56 |
| MaeIII | GTNAC | 4 cut(s) | 25, 58, 88, 202 |
| MlsI | TGGCCA | 1 cut(s) | 5 |
| MluNI | TGGCCA | 1 cut(s) | 5 |
| MlyI | GAGTC | 2 cut(s) | 58, 112 |
| MnlI | CCTC | 3 cut(s) | 140, 154, 205 |
| Mox20I | TGGCCA | 1 cut(s) | 5 |
| Mph1103I | ATGCAT | 1 cut(s) | 128 |
| MroNI | GCCGGC | 1 cut(s) | 173 |
| MscI | TGGCCA | 1 cut(s) | 5 |
| MseI | TTAA | 1 cut(s) | 78 |
| Msp20I | TGGCCA | 1 cut(s) | 5 |
| MspI | CCGG | 1 cut(s) | 174 |
| MspR9I | CCNGG | 1 cut(s) | 7 |
| MvaI | CCWGG | 1 cut(s) | 7 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 11 |
| NaeI | GCCGGC | 1 cut(s) | 175 |
| NgoMIV | GCCGGC | 1 cut(s) | 173 |
| NlaIII | CATG | 2 cut(s) | 126, 194 |
| NmuCI | GTSAC | 3 cut(s) | 25, 58, 202 |
| NsiI | ATGCAT | 1 cut(s) | 128 |
| PagI | TCATGA | 1 cut(s) | 190 |
| PdiI | GCCGGC | 1 cut(s) | 175 |
| PleI | GAGTC | 2 cut(s) | 58, 112 |
| PpsI | GAGTC | 2 cut(s) | 58, 112 |
| Psp6I | CCWGG | 1 cut(s) | 5 |
| PspGI | CCWGG | 1 cut(s) | 5 |
| RsaI | GTAC | 1 cut(s) | 42 |
| RsaNI | GTAC | 1 cut(s) | 41 |
| SaqAI | TTAA | 1 cut(s) | 78 |
| SchI | GAGTC | 2 cut(s) | 58, 112 |
| ScrFI | CCNGG | 1 cut(s) | 7 |
| SetI | ASST | 2 cut(s) | 11, 105 |
| SfaNI | GCATC | 3 cut(s) | 92, 135, 184 |
| SpeI | ACTAGT | 1 cut(s) | 43 |
| SspMI | CTAG | 2 cut(s) | 44, 56 |
| StyD4I | CCNGG | 1 cut(s) | 5 |
| Tru1I | TTAA | 1 cut(s) | 78 |
| Tru9I | TTAA | 1 cut(s) | 78 |
| TseFI | GTSAC | 3 cut(s) | 25, 58, 202 |
| Tsp45I | GTSAC | 3 cut(s) | 25, 58, 202 |
| TspDTI | ATGAA | 1 cut(s) | 179 |
| TspGWI | ACGGA | 1 cut(s) | 57 |
| XspI | CTAG | 2 cut(s) | 44, 56 |
| Zsp2I | ATGCAT | 1 cut(s) | 128 |