Protein ROOT HAIR DEFECTIVE 3 homolog
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_4g07951 |
| malus_domestica | MD12G1248200.v1.1 |
| rosa_chinensis | RchiOBHm_Chr1g0318681 RchiOBHm_Chr1g0319091 RchiOBHm_Chr2g0125271 RchiOBHm_Chr4g0426301 RchiOBHm_Chr7g0187311 |
| rosa_laevigata | RLG00000006896 RLG00000028895 |
| rosa_multiflora | Rmu_sc0001747.1_g000005 Rmu_sc0001877.1_g000012 Rmu_sc0001904.1_g000006 Rmu_sc0002983.1_g000016 Rmu_sc0006382.1_g000008 Rmu_sc0007285.1_g000017 |
| rosa_roxburghii | Rroxscaffold_1G00011350 Rroxscaffold_1G00037350 Rroxscaffold_1G00045990 Rroxscaffold_1G00049060 Rroxscaffold_1G00070310 Rroxscaffold_3G00222330 Rroxscaffold_4G00307450 Rroxscaffold_5G00385990 Rroxscaffold_6G00407860 Rroxscaffold_6G00428470 |
| rosa_rugosa | Rorug01G0107800 Rorug03G0135100 Rorug03G0135200 |
| rosa_samantha | Rh2AG155600 Rh2AG341400 Rh2BG161900 Rh2BG322800 Rh3BG144800 Rh3BG291400 Rh3BG291500 Rh4CG112300 Rh5DG415000 |
| rosa_wichuraiana | Rw6G014080 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 221 |
| AgsI | TTSAA | 1 cut(s) | 117 |
| AluBI | AGCT | 4 cut(s) | 37, 70, 75, 214 |
| AluI | AGCT | 4 cut(s) | 37, 70, 75, 214 |
| Alw21I | GWGCWC | 1 cut(s) | 216 |
| AoxI | GGCC | 2 cut(s) | 24, 135 |
| AspS9I | GGNCC | 1 cut(s) | 20 |
| AvaII | GGWCC | 1 cut(s) | 20 |
| BanII | GRGCYC | 1 cut(s) | 216 |
| Bbv12I | GWGCWC | 1 cut(s) | 216 |
| BccI | CCATC | 2 cut(s) | 8, 146 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 100, 134 |
| BlpI | GCTNAGC | 1 cut(s) | 71 |
| Bme18I | GGWCC | 1 cut(s) | 20 |
| BmgT120I | GGNCC | 1 cut(s) | 20 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 71 |
| BpuEI | CTTGAG | 1 cut(s) | 151 |
| BsaJI | CCNNGG | 1 cut(s) | 27 |
| Bse118I | RCCGGY | 1 cut(s) | 22 |
| Bse1I | ACTGG | 1 cut(s) | 186 |
| BseDI | CCNNGG | 1 cut(s) | 27 |
| BseGI | GGATG | 1 cut(s) | 205 |
| BseNI | ACTGG | 1 cut(s) | 186 |
| BshFI | GGCC | 2 cut(s) | 26, 137 |
| BsiHKAI | GWGCWC | 1 cut(s) | 216 |
| BsiSI | CCGG | 1 cut(s) | 23 |
| BsnI | GGCC | 2 cut(s) | 26, 137 |
| Bsp1286I | GDGCHC | 1 cut(s) | 216 |
| Bsp143I | GATC | 1 cut(s) | 97 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 71 |
| BspANI | GGCC | 2 cut(s) | 26, 137 |
| BsrFI | RCCGGY | 1 cut(s) | 22 |
| BsrI | ACTGG | 1 cut(s) | 186 |
| BssAI | RCCGGY | 1 cut(s) | 22 |
| BssECI | CCNNGG | 1 cut(s) | 27 |
| BssMI | GATC | 1 cut(s) | 97 |
| BssT1I | CCWWGG | 1 cut(s) | 27 |
| BstC8I | GCNNGC | 2 cut(s) | 52, 109 |
| BstDEI | CTNAG | 1 cut(s) | 71 |
| BstF5I | GGATG | 1 cut(s) | 205 |
| BstKTI | GATC | 1 cut(s) | 100 |
| BstMBI | GATC | 1 cut(s) | 97 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 51, 108 |
| BsuRI | GGCC | 2 cut(s) | 26, 137 |
| BtsCI | GGATG | 1 cut(s) | 205 |
| Cac8I | GCNNGC | 2 cut(s) | 52, 109 |
| Cfr10I | RCCGGY | 1 cut(s) | 22 |
| Cfr13I | GGNCC | 1 cut(s) | 20 |
| CviAII | CATG | 1 cut(s) | 130 |
| CviJI | RGCY | 6 cut(s) | 26, 37, 70, 75, 137, 214 |
| CviKI_1 | RGCY | 6 cut(s) | 26, 37, 70, 75, 137, 214 |
| DdeI | CTNAG | 1 cut(s) | 71 |
| DpnI | GATC | 1 cut(s) | 99 |
| DpnII | GATC | 1 cut(s) | 97 |
| Ecl136II | GAGCTC | 1 cut(s) | 214 |
| Eco130I | CCWWGG | 1 cut(s) | 27 |
| Eco24I | GRGCYC | 1 cut(s) | 216 |
| Eco47I | GGWCC | 1 cut(s) | 20 |
| Eco53kI | GAGCTC | 1 cut(s) | 214 |
| EcoICRI | GAGCTC | 1 cut(s) | 214 |
| EcoT14I | CCWWGG | 1 cut(s) | 27 |
| EcoT38I | GRGCYC | 1 cut(s) | 216 |
| ErhI | CCWWGG | 1 cut(s) | 27 |
| FaeI | CATG | 1 cut(s) | 133 |
| FaiI | YATR | 4 cut(s) | 41, 126, 131, 221 |
| FatI | CATG | 1 cut(s) | 129 |
| FokI | GGATG | 1 cut(s) | 212 |
| FriOI | GRGCYC | 1 cut(s) | 216 |
| HaeIII | GGCC | 2 cut(s) | 26, 137 |
| HapII | CCGG | 1 cut(s) | 23 |
| Hin1II | CATG | 1 cut(s) | 133 |
| HindIII | AAGCTT | 1 cut(s) | 35 |
| HpaII | CCGG | 1 cut(s) | 23 |
| Hpy188I | TCNGA | 1 cut(s) | 122 |
| Hpy188III | TCNNGA | 2 cut(s) | 95, 168 |
| HpyAV | CCTTC | 2 cut(s) | 95, 146 |
| HpyCH4V | TGCA | 3 cut(s) | 54, 81, 111 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 51, 108 |
| HpyF3I | CTNAG | 1 cut(s) | 71 |
| Hsp92II | CATG | 1 cut(s) | 133 |
| Kzo9I | GATC | 1 cut(s) | 97 |
| LpnPI | CCDG | 3 cut(s) | 36, 108, 167 |
| MalI | GATC | 1 cut(s) | 99 |
| MboI | GATC | 1 cut(s) | 97 |
| MhlI | GDGCHC | 1 cut(s) | 216 |
| MnlI | CCTC | 2 cut(s) | 11, 127 |
| MspI | CCGG | 1 cut(s) | 23 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 51, 108 |
| NdeII | GATC | 1 cut(s) | 97 |
| NlaIII | CATG | 1 cut(s) | 133 |
| PsiI | TTATAA | 1 cut(s) | 221 |
| Psp124BI | GAGCTC | 1 cut(s) | 216 |
| PspPI | GGNCC | 1 cut(s) | 20 |
| SacI | GAGCTC | 1 cut(s) | 216 |
| Sau3AI | GATC | 1 cut(s) | 97 |
| Sau96I | GGNCC | 1 cut(s) | 20 |
| SduI | GDGCHC | 1 cut(s) | 216 |
| SetI | ASST | 7 cut(s) | 39, 72, 77, 87, 157, 216, 227 |
| SinI | GGWCC | 1 cut(s) | 20 |
| SmlI | CTYRAG | 1 cut(s) | 166 |
| SmoI | CTYRAG | 1 cut(s) | 166 |
| SstI | GAGCTC | 1 cut(s) | 216 |
| StyI | CCWWGG | 1 cut(s) | 27 |
| TspDTI | ATGAA | 1 cut(s) | 165 |
| VpaK11BI | GGWCC | 1 cut(s) | 20 |