E3 ubiquitin-protein ligase RING1-like
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_4g07951 |
| malus_domestica | MD12G1248200.v1.1 |
| rosa_chinensis | RchiOBHm_Chr1g0318681 RchiOBHm_Chr1g0319091 RchiOBHm_Chr2g0125271 RchiOBHm_Chr4g0426301 RchiOBHm_Chr7g0187311 |
| rosa_laevigata | RLG00000006896 RLG00000028895 |
| rosa_multiflora | Rmu_sc0001747.1_g000005 Rmu_sc0001877.1_g000012 Rmu_sc0001904.1_g000006 Rmu_sc0002983.1_g000016 Rmu_sc0006382.1_g000008 Rmu_sc0007285.1_g000017 |
| rosa_roxburghii | Rroxscaffold_1G00011350 Rroxscaffold_1G00037350 Rroxscaffold_1G00045990 Rroxscaffold_1G00049060 Rroxscaffold_1G00070310 Rroxscaffold_3G00222330 Rroxscaffold_4G00307450 Rroxscaffold_5G00385990 Rroxscaffold_6G00407860 Rroxscaffold_6G00428470 |
| rosa_rugosa | Rorug01G0107800 Rorug03G0135100 Rorug03G0135200 |
| rosa_samantha | Rh2AG155600 Rh2AG341400 Rh2BG161900 Rh2BG322800 Rh3BG144800 Rh3BG291400 Rh3BG291500 Rh4CG112300 Rh5DG415000 |
| rosa_wichuraiana | Rw6G014080 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccBSI | CCGCTC | 1 cut(s) | 159 |
| AccIII | TCCGGA | 1 cut(s) | 40 |
| AciI | CCGC | 3 cut(s) | 109, 123, 157 |
| AfaI | GTAC | 1 cut(s) | 137 |
| AgeI | ACCGGT | 1 cut(s) | 28 |
| AgsI | TTSAA | 1 cut(s) | 169 |
| Aor13HI | TCCGGA | 1 cut(s) | 40 |
| ApeKI | GCWGC | 2 cut(s) | 125, 128 |
| AsiGI | ACCGGT | 1 cut(s) | 28 |
| AsuHPI | GGTGA | 1 cut(s) | 18 |
| BbvI | GCAGC | 2 cut(s) | 112, 115 |
| BisI | GCNGC | 3 cut(s) | 109, 126, 129 |
| BlsI | GCNGC | 3 cut(s) | 110, 127, 130 |
| BmiI | GGNNCC | 2 cut(s) | 16, 148 |
| BmrI | ACTGGG | 1 cut(s) | 55 |
| BmuI | ACTGGG | 1 cut(s) | 55 |
| BsaWI | WCCGGW | 3 cut(s) | 28, 40, 161 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 143, 173 |
| Bse118I | RCCGGY | 2 cut(s) | 11, 28 |
| Bse1I | ACTGG | 1 cut(s) | 50 |
| BseAI | TCCGGA | 1 cut(s) | 40 |
| BseNI | ACTGG | 1 cut(s) | 50 |
| BseXI | GCAGC | 2 cut(s) | 112, 115 |
| BshTI | ACCGGT | 1 cut(s) | 28 |
| BsiSI | CCGG | 4 cut(s) | 12, 29, 41, 162 |
| BslFI | GGGAC | 1 cut(s) | 62 |
| BsmFI | GGGAC | 1 cut(s) | 62 |
| Bsp13I | TCCGGA | 1 cut(s) | 40 |
| Bsp1407I | TGTACA | 1 cut(s) | 135 |
| Bsp143I | GATC | 3 cut(s) | 69, 141, 175 |
| BspACI | CCGC | 3 cut(s) | 109, 123, 157 |
| BspEI | TCCGGA | 1 cut(s) | 40 |
| BspHI | TCATGA | 1 cut(s) | 172 |
| BspLI | GGNNCC | 2 cut(s) | 16, 148 |
| BsrBI | CCGCTC | 1 cut(s) | 159 |
| BsrFI | RCCGGY | 2 cut(s) | 11, 28 |
| BsrGI | TGTACA | 1 cut(s) | 135 |
| BsrI | ACTGG | 1 cut(s) | 50 |
| BssAI | RCCGGY | 2 cut(s) | 11, 28 |
| BssMI | GATC | 3 cut(s) | 69, 141, 175 |
| Bst4CI | ACNGT | 1 cut(s) | 53 |
| BstAUI | TGTACA | 1 cut(s) | 135 |
| BstKTI | GATC | 3 cut(s) | 72, 144, 178 |
| BstMBI | GATC | 3 cut(s) | 69, 141, 175 |
| BstV1I | GCAGC | 2 cut(s) | 112, 115 |
| BtgZI | GCGATG | 1 cut(s) | 146 |
| BtsIMutI | CAGTG | 1 cut(s) | 58 |
| CciI | TCATGA | 1 cut(s) | 172 |
| Cfr10I | RCCGGY | 2 cut(s) | 11, 28 |
| Csp6I | GTAC | 1 cut(s) | 136 |
| CspAI | ACCGGT | 1 cut(s) | 28 |
| CviAII | CATG | 4 cut(s) | 95, 105, 139, 173 |
| CviJI | RGCY | 3 cut(s) | 15, 57, 149 |
| CviKI_1 | RGCY | 3 cut(s) | 15, 57, 149 |
| CviQI | GTAC | 1 cut(s) | 136 |
| DpnI | GATC | 3 cut(s) | 71, 143, 177 |
| DpnII | GATC | 3 cut(s) | 69, 141, 175 |
| FaeI | CATG | 4 cut(s) | 98, 108, 142, 176 |
| FaiI | YATR | 4 cut(s) | 96, 106, 140, 174 |
| FaqI | GGGAC | 1 cut(s) | 62 |
| FatI | CATG | 4 cut(s) | 94, 104, 138, 172 |
| Fnu4HI | GCNGC | 3 cut(s) | 109, 126, 129 |
| Fsp4HI | GCNGC | 3 cut(s) | 109, 126, 129 |
| GluI | GCNGC | 3 cut(s) | 109, 126, 129 |
| HapII | CCGG | 4 cut(s) | 12, 29, 41, 162 |
| Hin1II | CATG | 4 cut(s) | 98, 108, 142, 176 |
| HinfI | GANTC | 2 cut(s) | 23, 101 |
| HpaII | CCGG | 4 cut(s) | 12, 29, 41, 162 |
| HphI | GGTGA | 1 cut(s) | 18 |
| Hpy188I | TCNGA | 2 cut(s) | 146, 182 |
| Hpy188III | TCNNGA | 2 cut(s) | 41, 173 |
| HpyCH4III | ACNGT | 1 cut(s) | 53 |
| Hsp92II | CATG | 4 cut(s) | 98, 108, 142, 176 |
| Kpn2I | TCCGGA | 1 cut(s) | 40 |
| Kzo9I | GATC | 3 cut(s) | 69, 141, 175 |
| LmnI | GCTCC | 4 cut(s) | 20, 92, 146, 164 |
| LpnPI | CCDG | 7 cut(s) | 25, 31, 31, 42, 54, 97, 175 |
| Lsp1109I | GCAGC | 2 cut(s) | 112, 115 |
| MalI | GATC | 3 cut(s) | 71, 143, 177 |
| MbiI | CCGCTC | 1 cut(s) | 159 |
| MboI | GATC | 3 cut(s) | 69, 141, 175 |
| MlyI | GAGTC | 1 cut(s) | 17 |
| MroI | TCCGGA | 1 cut(s) | 40 |
| MspA1I | CMGCKG | 1 cut(s) | 125 |
| MspI | CCGG | 4 cut(s) | 12, 29, 41, 162 |
| NdeII | GATC | 3 cut(s) | 69, 141, 175 |
| NlaIII | CATG | 4 cut(s) | 98, 108, 142, 176 |
| NlaIV | GGNNCC | 2 cut(s) | 16, 148 |
| PagI | TCATGA | 1 cut(s) | 172 |
| PfeI | GAWTC | 1 cut(s) | 101 |
| PinAI | ACCGGT | 1 cut(s) | 28 |
| PkrI | GCNGC | 3 cut(s) | 110, 127, 130 |
| PleI | GAGTC | 1 cut(s) | 17 |
| PpsI | GAGTC | 1 cut(s) | 17 |
| PspN4I | GGNNCC | 2 cut(s) | 16, 148 |
| RsaI | GTAC | 1 cut(s) | 137 |
| RsaNI | GTAC | 1 cut(s) | 136 |
| SatI | GCNGC | 3 cut(s) | 109, 126, 129 |
| Sau3AI | GATC | 3 cut(s) | 69, 141, 175 |
| SchI | GAGTC | 1 cut(s) | 17 |
| SgrAI | CRCCGGYG | 1 cut(s) | 28 |
| SsiI | CCGC | 3 cut(s) | 109, 123, 157 |
| TaaI | ACNGT | 1 cut(s) | 53 |
| TatI | WGTACW | 1 cut(s) | 135 |
| TauI | GCSGC | 1 cut(s) | 111 |
| TfiI | GAWTC | 1 cut(s) | 101 |
| TscAI | CASTG | 1 cut(s) | 58 |
| TseI | GCWGC | 2 cut(s) | 125, 128 |
| TspDTI | ATGAA | 2 cut(s) | 49, 93 |
| TspGWI | ACGGA | 1 cut(s) | 79 |
| TspRI | CASTG | 1 cut(s) | 58 |