Rroxscaffold_2G00116820

Guanine nucleotide-binding protein subunit beta-like protein 1 homolog

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000002
Physical Location & Seq
Reverse (-)
44102313 .. 44102681
369 bp
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UTR
Exon/CDS
Intron
Rroxscaffold_2G00116820.1

Sequence Viewer

Length: 273 bp
ATGGGTGATTTGGGTACCGAGAGAAATCAAGAAACTTATGAAATTTTACTTGATTACTATGTCGTGGCTGGTTACGAGGATGGCTCCATGCTTTGGTGGAATATTAGAAATCCAGGTGTTCCAGCTTACATCCGTCAAGTTTCATTCGAGCCGCTTTTAAGCCTATGCATTGATGATTCACGCAATGAAATTGATTTGGAGCGACTGGCATATCAAGCACCTCTATTCGACCCGATGGTAAAATATTTGCAACAGTGGTGGGATCACGAGTGA

Protein Analysis

90

Amino Acids

10.7

Weight (kDa)

4.22

Isoelectric Point (pI)

52.5

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 14
AccB1I GGYRCC 1 cut(s) 14
AccB7I CCANNNNNTGG 1 cut(s) 93
AciI CCGC 1 cut(s) 152
AclWI GGATC 1 cut(s) 270
AcsI RAATTY 1 cut(s) 42
AfaI GTAC 1 cut(s) 16
AfiI CCNNNNNNNGG 1 cut(s) 93
AjnI CCWGG 1 cut(s) 112
AluBI AGCT 1 cut(s) 125
AluI AGCT 1 cut(s) 125
AlwI GGATC 1 cut(s) 270
ApoI RAATTY 1 cut(s) 42
Asp718I GGTACC 1 cut(s) 14
AsuHPI GGTGA 1 cut(s) 17
BanI GGYRCC 1 cut(s) 14
BauI CACGAG 1 cut(s) 266
BccI CCATC 2 cut(s) 74, 229
BciT130I CCWGG 1 cut(s) 114
BisI GCNGC 1 cut(s) 152
BlsI GCNGC 1 cut(s) 153
Bme1390I CCNGG 1 cut(s) 114
BmiI GGNNCC 2 cut(s) 16, 85
BmrFI CCNGG 1 cut(s) 114
BplI GAGNNNNNCTC 2 cut(s) 68, 100
Bsc4I CCNNNNNNNGG 1 cut(s) 93
Bse1I ACTGG 1 cut(s) 210
Bse3DI GCAATG 1 cut(s) 190
BseBI CCWGG 1 cut(s) 114
BseGI GGATG 2 cut(s) 85, 129
BseLI CCNNNNNNNGG 1 cut(s) 93
BseMI GCAATG 1 cut(s) 190
BseNI ACTGG 1 cut(s) 210
BshNI GGYRCC 1 cut(s) 14
BslI CCNNNNNNNGG 1 cut(s) 93
Bsp143I GATC 1 cut(s) 262
BspACI CCGC 1 cut(s) 152
BspLI GGNNCC 2 cut(s) 16, 85
BspPI GGATC 1 cut(s) 270
BspT107I GGYRCC 1 cut(s) 14
BsrDI GCAATG 1 cut(s) 190
BsrI ACTGG 1 cut(s) 210
BssMI GATC 1 cut(s) 262
BssSI CACGAG 1 cut(s) 266
Bst2BI CACGAG 1 cut(s) 266
Bst2UI CCWGG 1 cut(s) 114
Bst4CI ACNGT 1 cut(s) 255
BstF5I GGATG 2 cut(s) 85, 129
BstKTI GATC 1 cut(s) 265
BstMBI GATC 1 cut(s) 262
BstMWI GCNNNNNNNGC 1 cut(s) 215
BstNI CCWGG 1 cut(s) 114
BstSCI CCNGG 1 cut(s) 112
BtsCI GGATG 2 cut(s) 85, 129
BtsIMutI CAGTG 1 cut(s) 260
Csp6I GTAC 1 cut(s) 15
CspCI CAANNNNNGTGG 1 cut(s) 239
CviAII CATG 1 cut(s) 88
CviJI RGCY 5 cut(s) 68, 84, 125, 151, 162
CviKI_1 RGCY 5 cut(s) 68, 84, 125, 151, 162
CviQI GTAC 1 cut(s) 15
DpnI GATC 1 cut(s) 264
DpnII GATC 1 cut(s) 262
EcoRII CCWGG 1 cut(s) 112
EcoT22I ATGCAT 1 cut(s) 170
FaeI CATG 1 cut(s) 91
FaiI YATR 5 cut(s) 39, 60, 89, 166, 211
FatI CATG 1 cut(s) 87
Fnu4HI GCNGC 1 cut(s) 152
FokI GGATG 2 cut(s) 92, 116
Fsp4HI GCNGC 1 cut(s) 152
GluI GCNGC 1 cut(s) 152
Hin1II CATG 1 cut(s) 91
HinfI GANTC 1 cut(s) 176
HphI GGTGA 1 cut(s) 17
Hpy188III TCNNGA 2 cut(s) 29, 266
HpyCH4III ACNGT 1 cut(s) 255
HpyCH4V TGCA 2 cut(s) 168, 250
HpyF10VI GCNNNNNNNGC 1 cut(s) 215
Hsp92II CATG 1 cut(s) 91
KpnI GGTACC 1 cut(s) 18
Kzo9I GATC 1 cut(s) 262
LmnI GCTCC 2 cut(s) 89, 199
LpnPI CCDG 5 cut(s) 54, 99, 126, 135, 191
MaeIII GTNAC 1 cut(s) 71
MalI GATC 1 cut(s) 264
MboI GATC 1 cut(s) 262
MluCI AATT 2 cut(s) 42, 189
MnlI CCTC 2 cut(s) 70, 231
Mph1103I ATGCAT 1 cut(s) 170
MseI TTAA 1 cut(s) 158
MspR9I CCNGG 1 cut(s) 114
MvaI CCWGG 1 cut(s) 114
MwoI GCNNNNNNNGC 1 cut(s) 215
NdeII GATC 1 cut(s) 262
NlaIII CATG 1 cut(s) 91
NlaIV GGNNCC 2 cut(s) 16, 85
NsiI ATGCAT 1 cut(s) 170
PfeI GAWTC 1 cut(s) 176
PflMI CCANNNNNTGG 1 cut(s) 93
PkrI GCNGC 1 cut(s) 153
Psp6I CCWGG 1 cut(s) 112
PspGI CCWGG 1 cut(s) 112
PspN4I GGNNCC 2 cut(s) 16, 85
RsaI GTAC 1 cut(s) 16
RsaNI GTAC 1 cut(s) 15
SaqAI TTAA 1 cut(s) 158
SatI GCNGC 1 cut(s) 152
Sau3AI GATC 1 cut(s) 262
ScrFI CCNGG 1 cut(s) 114
SetI ASST 3 cut(s) 118, 127, 223
Sse9I AATT 2 cut(s) 42, 189
SsiI CCGC 1 cut(s) 152
SspI AATATT 2 cut(s) 103, 245
StyD4I CCNGG 1 cut(s) 112
TaaI ACNGT 1 cut(s) 255
TaqI TCGA 2 cut(s) 147, 228
TasI AATT 2 cut(s) 42, 189
TauI GCSGC 1 cut(s) 154
TfiI GAWTC 1 cut(s) 176
Tru1I TTAA 1 cut(s) 158
Tru9I TTAA 1 cut(s) 158
TscAI CASTG 1 cut(s) 260
TspDTI ATGAA 3 cut(s) 54, 132, 201
TspGWI ACGGA 1 cut(s) 122
TspRI CASTG 1 cut(s) 260
Van91I CCANNNNNTGG 1 cut(s) 93
XapI RAATTY 1 cut(s) 42
Zsp2I ATGCAT 1 cut(s) 170
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.