E3 ubiquitin-protein ligase
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G23280 AT3G23280 AT4G14365 |
| fragaria_vesca | FvH4_4g03720 FvH4_4g03720 FvH4_4g03730 |
| malus_domestica | MD05G1075400.v1.1 MD13G1214800.v1.1 MD16G1219900.v1.1 |
| prunus_persica | Prupe.1G040200_v2.0.a1 Prupe.1G040200_v2.0.a1 |
| pyrus_communis | pycom13g18820 pycom16g18320 |
| rosa_chinensis | RchiOBHm_Chr4g0393331 RchiOBHm_Chr4g0393371 |
| rosa_laevigata | RLG00000009750 RLG00000009758 RLG00000009759 RLG00000009763 |
| rosa_multiflora | Rmu_sc0008931.1_g000009 |
| rosa_roxburghii | Rroxscaffold_3G00224380 Rroxscaffold_5G00338320 Rroxscaffold_5G00338340 Rroxscaffold_5G00338360 Rroxscaffold_5G00338390 |
| rosa_rugosa | Rorug04G0001300 Rorug04G0001500 Rorug04G0001800 |
| rosa_samantha | Rh4AG046800 Rh4AG047000 Rh4AG047300 Rh4AG047400 Rh4BG042400 Rh4BG042600 Rh4CG049900 Rh4CG050000 Rh4DG044200 Rh5AG327600 |
| rosa_wichuraiana | Rw4G003700 Rw4G003720 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 163 |
| AfaI | GTAC | 1 cut(s) | 177 |
| AgsI | TTSAA | 2 cut(s) | 31, 215 |
| AluBI | AGCT | 2 cut(s) | 8, 151 |
| AluI | AGCT | 2 cut(s) | 8, 151 |
| ApeKI | GCWGC | 1 cut(s) | 53 |
| AsuHPI | GGTGA | 1 cut(s) | 257 |
| BbvI | GCAGC | 1 cut(s) | 40 |
| BfaI | CTAG | 1 cut(s) | 165 |
| BfuAI | ACCTGC | 1 cut(s) | 163 |
| BisI | GCNGC | 1 cut(s) | 54 |
| BlsI | GCNGC | 1 cut(s) | 55 |
| BmiI | GGNNCC | 1 cut(s) | 118 |
| BsaAI | YACGTR | 1 cut(s) | 179 |
| BseXI | GCAGC | 1 cut(s) | 40 |
| BspLI | GGNNCC | 1 cut(s) | 118 |
| BspMI | ACCTGC | 1 cut(s) | 163 |
| BstBAI | YACGTR | 1 cut(s) | 179 |
| BstC8I | GCNNGC | 2 cut(s) | 6, 153 |
| BstSNI | TACGTA | 1 cut(s) | 179 |
| BstV1I | GCAGC | 1 cut(s) | 40 |
| BveI | ACCTGC | 1 cut(s) | 163 |
| Cac8I | GCNNGC | 2 cut(s) | 6, 153 |
| Csp6I | GTAC | 1 cut(s) | 176 |
| CviJI | RGCY | 3 cut(s) | 8, 136, 151 |
| CviKI_1 | RGCY | 3 cut(s) | 8, 136, 151 |
| CviQI | GTAC | 1 cut(s) | 176 |
| Eco105I | TACGTA | 1 cut(s) | 179 |
| EcoT22I | ATGCAT | 1 cut(s) | 208 |
| FauNDI | CATATG | 1 cut(s) | 112 |
| Fnu4HI | GCNGC | 1 cut(s) | 54 |
| Fsp4HI | GCNGC | 1 cut(s) | 54 |
| FspBI | CTAG | 1 cut(s) | 165 |
| GluI | GCNGC | 1 cut(s) | 54 |
| HphI | GGTGA | 1 cut(s) | 257 |
| HpyCH4IV | ACGT | 1 cut(s) | 178 |
| HpyCH4V | TGCA | 5 cut(s) | 4, 56, 155, 172, 206 |
| HpySE526I | ACGT | 1 cut(s) | 178 |
| LmnI | GCTCC | 1 cut(s) | 148 |
| LpnPI | CCDG | 1 cut(s) | 158 |
| Lsp1109I | GCAGC | 1 cut(s) | 40 |
| MaeI | CTAG | 1 cut(s) | 165 |
| MaeII | ACGT | 1 cut(s) | 178 |
| MaeIII | GTNAC | 1 cut(s) | 222 |
| MboII | GAAGA | 1 cut(s) | 29 |
| MluCI | AATT | 1 cut(s) | 20 |
| MmeI | TCCRAC | 1 cut(s) | 126 |
| MnlI | CCTC | 1 cut(s) | 182 |
| Mph1103I | ATGCAT | 1 cut(s) | 208 |
| NdeI | CATATG | 1 cut(s) | 112 |
| NlaIV | GGNNCC | 1 cut(s) | 118 |
| NmuCI | GTSAC | 1 cut(s) | 222 |
| NsiI | ATGCAT | 1 cut(s) | 208 |
| PkrI | GCNGC | 1 cut(s) | 55 |
| Ppu21I | YACGTR | 1 cut(s) | 179 |
| PspN4I | GGNNCC | 1 cut(s) | 118 |
| RsaI | GTAC | 1 cut(s) | 177 |
| RsaNI | GTAC | 1 cut(s) | 176 |
| SatI | GCNGC | 1 cut(s) | 54 |
| SetI | ASST | 7 cut(s) | 10, 130, 153, 177, 181, 193, 247 |
| SgeI | CNNG | 9 cut(s) | 17, 101, 145, 154, 164, 177, 185, 232, 239 |
| SnaBI | TACGTA | 1 cut(s) | 179 |
| Sse9I | AATT | 1 cut(s) | 20 |
| SspMI | CTAG | 1 cut(s) | 165 |
| TaiI | ACGT | 1 cut(s) | 181 |
| TasI | AATT | 1 cut(s) | 20 |
| TseFI | GTSAC | 1 cut(s) | 222 |
| TseI | GCWGC | 1 cut(s) | 53 |
| Tsp45I | GTSAC | 1 cut(s) | 222 |
| TspDTI | ATGAA | 1 cut(s) | 30 |
| XspI | CTAG | 1 cut(s) | 165 |
| Zsp2I | ATGCAT | 1 cut(s) | 208 |