Tetratricopeptide repeat protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G04130 AT1G04130 |
| fragaria_vesca | FvH4_2g20260 FvH4_2g20260 FvH4_2g20260 |
| malus_domestica | MD05G1186300.v1.1 MD05G1186500.v1.1 MD10G1174200.v1.1 MD10G1174300.v1.1 |
| prunus_persica | Prupe.1G573100_v2.0.a1 Prupe.8G213100_v2.0.a1 |
| pyrus_communis | pycom10g15020 pycom10g15030 |
| rosa_chinensis | RchiOBHm_Chr6g0286031 RchiOBHm_Chr6g0286041 |
| rosa_laevigata | RLG00000012587 RLG00000012588 |
| rosa_multiflora | Rmu_co8274415.1_g000001 |
| rosa_roxburghii | Rroxscaffold_3G00230420 Rroxscaffold_3G00250000 Rroxscaffold_7G00182510 |
| rosa_rugosa | Rorug06G0178400 Rorug06G0178500 |
| rosa_samantha | Rh5CG093800 Rh6AG290400 Rh6AG290500 Rh6BG107700 Rh6BG293900 Rh6BG294000 Rh6CG293400 Rh6CG293500 Rh6DG285500 Rh6DG285600 Rh7CG476900 Rh7DG446100 |
| rosa_wichuraiana | Rw6G025030 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 212 |
| AcsI | RAATTY | 1 cut(s) | 304 |
| AcyI | GRCGYC | 1 cut(s) | 209 |
| AgsI | TTSAA | 3 cut(s) | 79, 98, 314 |
| AluBI | AGCT | 2 cut(s) | 53, 191 |
| AluI | AGCT | 2 cut(s) | 53, 191 |
| Alw26I | GTCTC | 1 cut(s) | 200 |
| AoxI | GGCC | 1 cut(s) | 55 |
| ApeKI | GCWGC | 1 cut(s) | 89 |
| ApoI | RAATTY | 1 cut(s) | 304 |
| AsuC2I | CCSGG | 1 cut(s) | 203 |
| BanII | GRGCYC | 1 cut(s) | 235 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 131, 163 |
| BbsI | GAAGAC | 1 cut(s) | 67 |
| BbvI | GCAGC | 1 cut(s) | 76 |
| BccI | CCATC | 2 cut(s) | 7, 281 |
| BceAI | ACGGC | 1 cut(s) | 56 |
| BcnI | CCSGG | 1 cut(s) | 203 |
| BcoDI | GTCTC | 1 cut(s) | 200 |
| BfaI | CTAG | 1 cut(s) | 364 |
| BisI | GCNGC | 1 cut(s) | 90 |
| BlsI | GCNGC | 1 cut(s) | 91 |
| Bme1390I | CCNGG | 1 cut(s) | 203 |
| BmrFI | CCNGG | 1 cut(s) | 203 |
| BmsI | GCATC | 1 cut(s) | 52 |
| BpiI | GAAGAC | 1 cut(s) | 67 |
| BpuEI | CTTGAG | 1 cut(s) | 86 |
| BpuMI | CCSGG | 1 cut(s) | 203 |
| BsaHI | GRCGYC | 1 cut(s) | 209 |
| Bse3DI | GCAATG | 1 cut(s) | 66 |
| BseGI | GGATG | 1 cut(s) | 18 |
| BseMI | GCAATG | 1 cut(s) | 66 |
| BseXI | GCAGC | 1 cut(s) | 76 |
| BshFI | GGCC | 1 cut(s) | 57 |
| BsiSI | CCGG | 1 cut(s) | 203 |
| BsmAI | GTCTC | 1 cut(s) | 200 |
| BsmBI | CGTCTC | 1 cut(s) | 200 |
| BsnI | GGCC | 1 cut(s) | 57 |
| Bsp1286I | GDGCHC | 1 cut(s) | 235 |
| Bsp143I | GATC | 1 cut(s) | 268 |
| BspANI | GGCC | 1 cut(s) | 57 |
| BsrDI | GCAATG | 1 cut(s) | 66 |
| BssMI | GATC | 1 cut(s) | 268 |
| BssNI | GRCGYC | 1 cut(s) | 209 |
| BstACI | GRCGYC | 1 cut(s) | 209 |
| BstC8I | GCNNGC | 1 cut(s) | 55 |
| BstF5I | GGATG | 1 cut(s) | 18 |
| BstKTI | GATC | 1 cut(s) | 271 |
| BstMAI | GTCTC | 1 cut(s) | 200 |
| BstMBI | GATC | 1 cut(s) | 268 |
| BstSCI | CCNGG | 1 cut(s) | 201 |
| BstV1I | GCAGC | 1 cut(s) | 76 |
| BstV2I | GAAGAC | 1 cut(s) | 67 |
| BsuRI | GGCC | 1 cut(s) | 57 |
| BtsCI | GGATG | 1 cut(s) | 18 |
| Cac8I | GCNNGC | 1 cut(s) | 55 |
| CviAII | CATG | 2 cut(s) | 236, 274 |
| CviJI | RGCY | 5 cut(s) | 53, 57, 191, 233, 291 |
| CviKI_1 | RGCY | 5 cut(s) | 53, 57, 191, 233, 291 |
| DpnI | GATC | 1 cut(s) | 270 |
| DpnII | GATC | 1 cut(s) | 268 |
| DraI | TTTAAA | 1 cut(s) | 301 |
| Eco24I | GRGCYC | 1 cut(s) | 235 |
| EcoT38I | GRGCYC | 1 cut(s) | 235 |
| Esp3I | CGTCTC | 1 cut(s) | 200 |
| FaeI | CATG | 2 cut(s) | 239, 277 |
| FaiI | YATR | 5 cut(s) | 10, 158, 237, 267, 275 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 42, 74 |
| FatI | CATG | 2 cut(s) | 235, 273 |
| Fnu4HI | GCNGC | 1 cut(s) | 90 |
| FokI | GGATG | 1 cut(s) | 25 |
| FriOI | GRGCYC | 1 cut(s) | 235 |
| Fsp4HI | GCNGC | 1 cut(s) | 90 |
| FspBI | CTAG | 1 cut(s) | 364 |
| GluI | GCNGC | 1 cut(s) | 90 |
| HaeIII | GGCC | 1 cut(s) | 57 |
| HapII | CCGG | 1 cut(s) | 203 |
| Hin1I | GRCGYC | 1 cut(s) | 209 |
| Hin1II | CATG | 2 cut(s) | 239, 277 |
| HindIII | AAGCTT | 1 cut(s) | 189 |
| HinfI | GANTC | 2 cut(s) | 83, 173 |
| HpaII | CCGG | 1 cut(s) | 203 |
| Hpy188I | TCNGA | 1 cut(s) | 226 |
| Hpy188III | TCNNGA | 1 cut(s) | 281 |
| HpyAV | CCTTC | 1 cut(s) | 103 |
| HpyCH4IV | ACGT | 1 cut(s) | 209 |
| HpyCH4V | TGCA | 2 cut(s) | 261, 336 |
| HpySE526I | ACGT | 1 cut(s) | 209 |
| Hsp92I | GRCGYC | 1 cut(s) | 209 |
| Hsp92II | CATG | 2 cut(s) | 239, 277 |
| Kzo9I | GATC | 1 cut(s) | 268 |
| LpnPI | CCDG | 2 cut(s) | 39, 216 |
| Lsp1109I | GCAGC | 1 cut(s) | 76 |
| LweI | GCATC | 1 cut(s) | 52 |
| MaeI | CTAG | 1 cut(s) | 364 |
| MaeII | ACGT | 1 cut(s) | 209 |
| MaeIII | GTNAC | 1 cut(s) | 197 |
| MalI | GATC | 1 cut(s) | 270 |
| MboI | GATC | 1 cut(s) | 268 |
| MboII | GAAGA | 2 cut(s) | 67, 286 |
| MhlI | GDGCHC | 1 cut(s) | 235 |
| MluCI | AATT | 5 cut(s) | 256, 304, 321, 331, 340 |
| MlyI | GAGTC | 1 cut(s) | 182 |
| MseI | TTAA | 1 cut(s) | 300 |
| MspI | CCGG | 1 cut(s) | 203 |
| MspR9I | CCNGG | 1 cut(s) | 203 |
| NciI | CCSGG | 1 cut(s) | 203 |
| NdeII | GATC | 1 cut(s) | 268 |
| NlaIII | CATG | 2 cut(s) | 239, 277 |
| NmuCI | GTSAC | 1 cut(s) | 197 |
| PfeI | GAWTC | 1 cut(s) | 83 |
| PkrI | GCNGC | 1 cut(s) | 91 |
| PleI | GAGTC | 1 cut(s) | 181 |
| PpsI | GAGTC | 1 cut(s) | 181 |
| SaqAI | TTAA | 1 cut(s) | 300 |
| SatI | GCNGC | 1 cut(s) | 90 |
| Sau3AI | GATC | 1 cut(s) | 268 |
| SchI | GAGTC | 1 cut(s) | 182 |
| ScrFI | CCNGG | 1 cut(s) | 203 |
| SduI | GDGCHC | 1 cut(s) | 235 |
| SetI | ASST | 3 cut(s) | 55, 193, 212 |
| SfaNI | GCATC | 1 cut(s) | 52 |
| SmlI | CTYRAG | 1 cut(s) | 101 |
| SmoI | CTYRAG | 1 cut(s) | 101 |
| Sse9I | AATT | 5 cut(s) | 256, 304, 321, 331, 340 |
| SspMI | CTAG | 1 cut(s) | 364 |
| StyD4I | CCNGG | 1 cut(s) | 201 |
| TaiI | ACGT | 1 cut(s) | 212 |
| TaqI | TCGA | 1 cut(s) | 27 |
| TasI | AATT | 5 cut(s) | 256, 304, 321, 331, 340 |
| TfiI | GAWTC | 1 cut(s) | 83 |
| Tru1I | TTAA | 1 cut(s) | 300 |
| Tru9I | TTAA | 1 cut(s) | 300 |
| TseFI | GTSAC | 1 cut(s) | 197 |
| TseI | GCWGC | 1 cut(s) | 89 |
| Tsp45I | GTSAC | 1 cut(s) | 197 |
| XapI | RAATTY | 1 cut(s) | 304 |
| XspI | CTAG | 1 cut(s) | 364 |
| ZraI | GACGTC | 1 cut(s) | 210 |