Tetratricopeptide repeat protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G04130 AT1G04130 |
| fragaria_vesca | FvH4_2g20260 FvH4_2g20260 FvH4_2g20260 |
| malus_domestica | MD05G1186300.v1.1 MD05G1186500.v1.1 MD10G1174200.v1.1 MD10G1174300.v1.1 |
| prunus_persica | Prupe.1G573100_v2.0.a1 Prupe.8G213100_v2.0.a1 |
| pyrus_communis | pycom10g15020 pycom10g15030 |
| rosa_chinensis | RchiOBHm_Chr6g0286031 RchiOBHm_Chr6g0286041 |
| rosa_laevigata | RLG00000012587 RLG00000012588 |
| rosa_multiflora | Rmu_co8274415.1_g000001 |
| rosa_roxburghii | Rroxscaffold_3G00230420 Rroxscaffold_3G00250000 Rroxscaffold_7G00182510 |
| rosa_rugosa | Rorug06G0178400 Rorug06G0178500 |
| rosa_samantha | Rh5CG093800 Rh6AG290400 Rh6AG290500 Rh6BG107700 Rh6BG293900 Rh6BG294000 Rh6CG293400 Rh6CG293500 Rh6DG285500 Rh6DG285600 Rh7CG476900 Rh7DG446100 |
| rosa_wichuraiana | Rw6G025030 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 200 |
| AciI | CCGC | 1 cut(s) | 60 |
| AcsI | RAATTY | 1 cut(s) | 292 |
| AcyI | GRCGYC | 1 cut(s) | 197 |
| AgsI | TTSAA | 2 cut(s) | 67, 86 |
| AjnI | CCWGG | 1 cut(s) | 158 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 119, 151 |
| AluBI | AGCT | 2 cut(s) | 41, 179 |
| AluI | AGCT | 2 cut(s) | 41, 179 |
| Alw26I | GTCTC | 1 cut(s) | 188 |
| ApeKI | GCWGC | 1 cut(s) | 77 |
| ApoI | RAATTY | 1 cut(s) | 292 |
| AsuC2I | CCSGG | 1 cut(s) | 191 |
| AsuII | TTCGAA | 1 cut(s) | 212 |
| BbvI | GCAGC | 1 cut(s) | 64 |
| BccI | CCATC | 2 cut(s) | 62, 269 |
| BciT130I | CCWGG | 1 cut(s) | 160 |
| BcnI | CCSGG | 1 cut(s) | 191 |
| BcoDI | GTCTC | 1 cut(s) | 188 |
| BisI | GCNGC | 2 cut(s) | 60, 78 |
| BlsI | GCNGC | 2 cut(s) | 61, 79 |
| Bme1390I | CCNGG | 2 cut(s) | 160, 191 |
| BmrFI | CCNGG | 2 cut(s) | 160, 191 |
| BmsI | GCATC | 2 cut(s) | 40, 130 |
| Bpu14I | TTCGAA | 1 cut(s) | 212 |
| BpuEI | CTTGAG | 1 cut(s) | 74 |
| BpuMI | CCSGG | 1 cut(s) | 191 |
| BsaHI | GRCGYC | 1 cut(s) | 197 |
| BsaJI | CCNNGG | 1 cut(s) | 159 |
| BseBI | CCWGG | 1 cut(s) | 160 |
| BseDI | CCNNGG | 1 cut(s) | 159 |
| BseGI | GGATG | 1 cut(s) | 145 |
| BseXI | GCAGC | 1 cut(s) | 64 |
| BsiSI | CCGG | 1 cut(s) | 191 |
| BsmAI | GTCTC | 1 cut(s) | 188 |
| BsmBI | CGTCTC | 1 cut(s) | 188 |
| Bsp119I | TTCGAA | 1 cut(s) | 212 |
| Bsp143I | GATC | 1 cut(s) | 256 |
| BspACI | CCGC | 1 cut(s) | 60 |
| BspT104I | TTCGAA | 1 cut(s) | 212 |
| BssECI | CCNNGG | 1 cut(s) | 159 |
| BssMI | GATC | 1 cut(s) | 256 |
| BssNI | GRCGYC | 1 cut(s) | 197 |
| Bst2UI | CCWGG | 1 cut(s) | 160 |
| BstACI | GRCGYC | 1 cut(s) | 197 |
| BstBI | TTCGAA | 1 cut(s) | 212 |
| BstF5I | GGATG | 1 cut(s) | 145 |
| BstKTI | GATC | 1 cut(s) | 259 |
| BstMAI | GTCTC | 1 cut(s) | 188 |
| BstMBI | GATC | 1 cut(s) | 256 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 59 |
| BstNI | CCWGG | 1 cut(s) | 160 |
| BstSCI | CCNGG | 2 cut(s) | 158, 189 |
| BstV1I | GCAGC | 1 cut(s) | 64 |
| BtgZI | GCGATG | 1 cut(s) | 40 |
| BtsCI | GGATG | 1 cut(s) | 145 |
| CviAII | CATG | 3 cut(s) | 224, 262, 298 |
| CviJI | RGCY | 3 cut(s) | 41, 179, 279 |
| CviKI_1 | RGCY | 3 cut(s) | 41, 179, 279 |
| DpnI | GATC | 1 cut(s) | 258 |
| DpnII | GATC | 1 cut(s) | 256 |
| DraI | TTTAAA | 1 cut(s) | 289 |
| EcoRII | CCWGG | 1 cut(s) | 158 |
| Esp3I | CGTCTC | 1 cut(s) | 188 |
| FaeI | CATG | 3 cut(s) | 227, 265, 301 |
| FaiI | YATR | 4 cut(s) | 225, 255, 263, 299 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 30, 62, 119, 151 |
| FatI | CATG | 3 cut(s) | 223, 261, 297 |
| Fnu4HI | GCNGC | 2 cut(s) | 60, 78 |
| FokI | GGATG | 1 cut(s) | 152 |
| Fsp4HI | GCNGC | 2 cut(s) | 60, 78 |
| GluI | GCNGC | 2 cut(s) | 60, 78 |
| HapII | CCGG | 1 cut(s) | 191 |
| Hin1I | GRCGYC | 1 cut(s) | 197 |
| Hin1II | CATG | 3 cut(s) | 227, 265, 301 |
| HindIII | AAGCTT | 1 cut(s) | 177 |
| HinfI | GANTC | 1 cut(s) | 71 |
| HpaII | CCGG | 1 cut(s) | 191 |
| Hpy188III | TCNNGA | 1 cut(s) | 269 |
| HpyAV | CCTTC | 2 cut(s) | 73, 91 |
| HpyCH4IV | ACGT | 1 cut(s) | 197 |
| HpyCH4V | TGCA | 1 cut(s) | 249 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 59 |
| HpySE526I | ACGT | 1 cut(s) | 197 |
| Hsp92I | GRCGYC | 1 cut(s) | 197 |
| Hsp92II | CATG | 3 cut(s) | 227, 265, 301 |
| Kzo9I | GATC | 1 cut(s) | 256 |
| LpnPI | CCDG | 3 cut(s) | 145, 172, 204 |
| Lsp1109I | GCAGC | 1 cut(s) | 64 |
| LweI | GCATC | 2 cut(s) | 40, 130 |
| MaeII | ACGT | 1 cut(s) | 197 |
| MaeIII | GTNAC | 1 cut(s) | 185 |
| MalI | GATC | 1 cut(s) | 258 |
| MboI | GATC | 1 cut(s) | 256 |
| MboII | GAAGA | 1 cut(s) | 274 |
| MluCI | AATT | 2 cut(s) | 244, 292 |
| MseI | TTAA | 1 cut(s) | 288 |
| MspI | CCGG | 1 cut(s) | 191 |
| MspR9I | CCNGG | 2 cut(s) | 160, 191 |
| MvaI | CCWGG | 1 cut(s) | 160 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 59 |
| NciI | CCSGG | 1 cut(s) | 191 |
| NdeII | GATC | 1 cut(s) | 256 |
| NlaIII | CATG | 3 cut(s) | 227, 265, 301 |
| NmuCI | GTSAC | 1 cut(s) | 185 |
| NspV | TTCGAA | 1 cut(s) | 212 |
| PfeI | GAWTC | 1 cut(s) | 71 |
| PkrI | GCNGC | 2 cut(s) | 61, 79 |
| Psp6I | CCWGG | 1 cut(s) | 158 |
| PspGI | CCWGG | 1 cut(s) | 158 |
| SaqAI | TTAA | 1 cut(s) | 288 |
| SatI | GCNGC | 2 cut(s) | 60, 78 |
| Sau3AI | GATC | 1 cut(s) | 256 |
| ScrFI | CCNGG | 2 cut(s) | 160, 191 |
| SetI | ASST | 4 cut(s) | 43, 48, 181, 200 |
| SfaNI | GCATC | 2 cut(s) | 40, 130 |
| SfuI | TTCGAA | 1 cut(s) | 212 |
| SmlI | CTYRAG | 1 cut(s) | 89 |
| SmoI | CTYRAG | 1 cut(s) | 89 |
| Sse9I | AATT | 2 cut(s) | 244, 292 |
| SsiI | CCGC | 1 cut(s) | 60 |
| StyD4I | CCNGG | 2 cut(s) | 158, 189 |
| TaiI | ACGT | 1 cut(s) | 200 |
| TaqI | TCGA | 1 cut(s) | 212 |
| TasI | AATT | 2 cut(s) | 244, 292 |
| TauI | GCSGC | 1 cut(s) | 62 |
| TfiI | GAWTC | 1 cut(s) | 71 |
| Tru1I | TTAA | 1 cut(s) | 288 |
| Tru9I | TTAA | 1 cut(s) | 288 |
| TseFI | GTSAC | 1 cut(s) | 185 |
| TseI | GCWGC | 1 cut(s) | 77 |
| Tsp45I | GTSAC | 1 cut(s) | 185 |
| XapI | RAATTY | 1 cut(s) | 292 |
| ZraI | GACGTC | 1 cut(s) | 198 |