Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000006

Orthogroup ID

OG0002927

Physical Location & Seq

Genomic Coordinates Forward (+)

31660282 .. 31663304

Gene Structure 3023 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_6G00409120.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1755 bp

ATGGAAATGGAAGACCAGTATGGTTTAGGAGATCTCAGGCAGCTCATGAACGGAACTGGTAGGTCTCACTTCCCGGCCATCCAGACTCCGACGGAGCTCTTCCCCAGTAGCCACCACCATAGGCCTCAGCTCCTCGCCCCGGCCCATCATCATCATCATCAGCAGCAGCAGCAGCATCCCTACGAGATCATGATGATGGGCCGGCTTCAGACCGCCCACGACATCATGCCACGTGGGATTCATGAGTTTCGGTCTTCTGACTCGGCCGGTGGTTGTGGTGGTGGTGGTGGTGCTTGTACTAATAATACTGTTGCGGCTACTTCTTCTCTCAGTGGCGGCGGTGGTCTGGAGGCTGAGGGCGGAGGCTGTCTCGGCGGTGATGGCGGGTCCGGGAGGTGGCCGAGGCAAGAGACTCTCACGCTTCTGGAGATCCGGTCACGACTCGATTACAAGTTCAAAGAGGCTAATCAAAAAGGGCCGCTCTGGGATGAAGTCTCTAGAATCATGTGTGAGGAACATGGGTATCAAAGAAGCGGAAAAAAATGCAGGGAAAAATTCGAAAACTTATACAAGTATTACAAGAAGACAAAGGAAGGGAAGGCCGGAAGACAAGATGGCAAGCACTATAGATTCTTTCGGCAGCTTGAAGCTCTCTATGGCGAAACTAGCAACAACATTGCCGTCTCATCACTCCCGCCAGATCAATCCCATTTCGTCGGTAATAATAATATCAATAACAATAATAATACTTTTCGTTATCAAGTTCAACCGAGTCATCAAGATACTACTACCGCTACTACCTATCAGTCCACTCAAAGCGTCTCGAACTCTTCCGATTTCGAGGACTCGTCTTCCTCGGAGGACAACGACGGCAGTGCCATTGCTCCGATGGACGATGAAGTGCTTGAGATGAAGAGGGTAAGGAAGAGGAGGGGATGGAAGGTAAAGATAAAGGAGTTTATCGACGTGCAAATGAGGAAGATGATGGAGAAGCAAGAGGAGTGGTTGGAGAAGCTGATGGGCACGCTTGAGCAGAAAGAAAGGGAGAGGGTGTTGAGAGAGGAAGAGTGGCGAAAACAAGAGGCGGGCCGGGTGGAGCGAGAGCAGCAGTTTTGGGCTAAAGAGAGAGCCTGGATTGAAGCAAGGGATAAAGCTCTCATGGATGCATTGCAGAAATTAACAGGAAGTAGTACTAGTCATGAAGTAAAGACTTCTTCTTCAACCCCTGATCATGATCATGAGGATATTGTGAGTGAGCAAGAGACATGGCCGGAATGCGAGATTAACAAATTGATTCAGTTGAGAGGAAGCATGGAGTCGAGGTTTAGTACTAATCAGAGAGGTGGGTGTGTGGAGGAAAGACTTTGGGAGGAGATAGCGGCGAAGATGAGTTGTTTGGGATATGAAAGGAGTGGAATGGTCTGCAAGGAGAAATGGGAGAGCATAAACTATGTGAGGAAGTGTTCCAAAGAGTTGTTCAGTAAGAAGAGGAAGGAGAACAATTCAAGGTCAAGCTCTTGTTACTTTGGGAACAATGAGTCCAATTCCTCATTGTATAGTAGTCAAGGAGGAGTCTATGCTACTTGTGAAATGAATAATCATGAACAAGGTAATGATGGTTCTCCCTCTAATAATCCGAATGTAGGCAATGCTGCAGTGGTGAACGAGACTTGTTTTCCATTTTTGATGGGCGAAGGAGACAACTTGTGGGAGAACTACGGGTTGAAGCTCAGCAAGGGTAGCCAAAACCAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0007275 GO:0007389 GO:0008150 GO:0009653 GO:0009791 GO:0009798 GO:0009889 GO:0009908 GO:0009909 GO:0010016 GO:0010033 GO:0010200 GO:0010243 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0022414 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0040008 GO:0042221 GO:0042493 GO:0042802 GO:0042803 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0045926 GO:0046620 GO:0046621 GO:0046983 GO:0048367 GO:0048437 GO:0048438 GO:0048439 GO:0048441 GO:0048442 GO:0048444 GO:0048446 GO:0048464 GO:0048465 GO:0048498 GO:0048519 GO:0048559 GO:0048560 GO:0048580 GO:0048608 GO:0048638 GO:0048640 GO:0048731 GO:0048827 GO:0048831 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051093 GO:0051171 GO:0051239 GO:0051241 GO:0051252 GO:0060255 GO:0061458 GO:0065007 GO:0080090 GO:0090428 GO:0090567 GO:0090696 GO:0090697 GO:0090698 GO:0090707 GO:0097159 GO:0099402 GO:0140110 GO:1901363 GO:1901698 GO:1901700 GO:1903506 GO:1905392 GO:2000026 GO:2000112 GO:2000241 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Myb_DNA-bind_4

Protein Analysis

584

Amino Acids

66.32

Weight (kDa)

6.17

Isoelectric Point (pI)

54.82

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Myb_DNA-bind_4	PF13837	132 - 218	4.8e-21	Myb/SANT-like DNA-binding domain
Myb_DNA-bind_4	PF13837	422 - 498	1.1e-12	Myb/SANT-like DNA-binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002927)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G10000 AT3G10000 AT5G03680
fragaria_vesca	FvH4_6g17990 FvH4_6g17990 FvH4_7g05970
malus_domestica	MD02G1247700.v1.1 MD07G1068800.v1.1 MD12G1018900.v1.1 MD14G1016900.v1.1
prunus_persica	Prupe.2G086500_v2.0.a1 Prupe.7G116400_v2.0.a1
pyrus_communis	pycom02g21160 pycom07g05290 pycom12g01570 pycom14g01450
rosa_chinensis	RchiOBHm_Chr1g0333231 RchiOBHm_Chr3g0472271
rosa_laevigata	RLG00000024094 RLG00000029619
rosa_multiflora	Rmu_sc0001214.1_g000051 Rmu_sc0008192.1_g000003
rosa_roxburghii	Rroxscaffold_4G00317680 Rroxscaffold_6G00409120
rosa_rugosa	Rorug01G0108100 Rorug03G0123400
rosa_samantha	Rh1AG131100 Rh1BG100500 Rh1CG125000 Rh1DG136500 Rh3AG175700 Rh3BG201200 Rh3CG192500 Rh3CG199600 Rh3CG199700 Rh3DG173800
rosa_wichuraiana	Rw1G010840 Rw3G016550

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccBSI	CCGCTC	1 cut(s)	481
AclWI	GGATC	1 cut(s)	424
AcoI	YGGCCR	4 cut(s)	75, 264, 398, 1268
AcsI	RAATTY	1 cut(s)	554
AcuI	CTGAAG	1 cut(s)	191
AcvI	CACGTG	1 cut(s)	233
AfaI	GTAC	3 cut(s)	298, 1192, 1330
AfiI	CCNNNNNNNGG	3 cut(s)	139, 396, 1643
AgsI	TTSAA	7 cut(s)	457, 647, 767, 1139, 1221, 1506, 1726
AhlI	ACTAGT	1 cut(s)	1193
AjiI	CACGTC	1 cut(s)	967
AjnI	CCWGG	1 cut(s)	1130
AjuI	GAANNNNNNNTTGG	2 cut(s)	1460, 1492
AloI	GAACNNNNNNTCC	2 cut(s)	1523, 1555
AluBI	AGCT	9 cut(s)	43, 97, 130, 643, 650, 1015, 1154, 1515, 1729
AluI	AGCT	9 cut(s)	43, 97, 130, 643, 650, 1015, 1154, 1515, 1729
Alw21I	GWGCWC	1 cut(s)	99
Alw26I	GTCTC	9 cut(s)	69, 374, 404, 499, 688, 826, 1256, 1661, 1692
AlwI	GGATC	1 cut(s)	424
ApeKI	GCWGC	8 cut(s)	40, 163, 166, 169, 172, 640, 1105, 1652
ApoI	RAATTY	1 cut(s)	554
AspS9I	GGNCC	5 cut(s)	142, 199, 387, 476, 1087
AsuC2I	CCSGG	4 cut(s)	74, 140, 391, 1091
AsuHPI	GGTGA	2 cut(s)	389, 1672
AsuII	TTCGAA	1 cut(s)	558
AvaII	GGWCC	1 cut(s)	387
BaeGI	GKGCMC	1 cut(s)	1025
BaeI	ACNNNNGTAYC	2 cut(s)	506, 539
BanII	GRGCYC	1 cut(s)	99
BbrPI	CACGTG	1 cut(s)	233
BbsI	GAAGAC	5 cut(s)	18, 246, 590, 613, 843
Bbv12I	GWGCWC	1 cut(s)	99
BbvCI	CCTCAGC	2 cut(s)	126, 354
BbvI	GCAGC	8 cut(s)	52, 175, 178, 181, 184, 652, 1117, 1639
BceAI	ACGGC	2 cut(s)	665, 886
BcgI	CGANNNNNNTGC	2 cut(s)	857, 891
BciT130I	CCWGG	1 cut(s)	1132
BclI	TGATCA	2 cut(s)	1228, 1234
BcnI	CCSGG	4 cut(s)	74, 140, 391, 1091
BcoDI	GTCTC	9 cut(s)	69, 374, 404, 499, 688, 826, 1256, 1661, 1692
BcuI	ACTAGT	1 cut(s)	1193
BfaI	CTAG	3 cut(s)	498, 666, 1194
BfmI	CTRYAG	2 cut(s)	625, 1653
BglII	AGATCT	1 cut(s)	31
BlpI	GCTNAGC	1 cut(s)	1730
BmcAI	AGTACT	2 cut(s)	1192, 1330
Bme1390I	CCNGG	5 cut(s)	74, 140, 391, 1091, 1132
Bme18I	GGWCC	1 cut(s)	387
BmgBI	CACGTC	1 cut(s)	967
BmgT120I	GGNCC	5 cut(s)	142, 199, 387, 476, 1087
BmiI	GGNNCC	1 cut(s)	388
BmrFI	CCNGG	5 cut(s)	74, 140, 391, 1091, 1132
BmrI	ACTGGG	1 cut(s)	99
BmsI	GCATC	2 cut(s)	184, 1153
BmuI	ACTGGG	1 cut(s)	99
BpiI	GAAGAC	5 cut(s)	18, 246, 590, 613, 843
BplI	GAGNNNNNCTC	2 cut(s)	354, 386
BpmI	CTGGAG	2 cut(s)	368, 446
Bpu10I	CCTNAGC	2 cut(s)	126, 354
Bpu1102I	GCTNAGC	1 cut(s)	1730
Bpu14I	TTCGAA	1 cut(s)	558
BpuEI	CTTGAG	2 cut(s)	926, 1049
BpuMI	CCSGG	4 cut(s)	74, 140, 391, 1091
BsaAI	YACGTR	1 cut(s)	233
BsaBI	GATNNNNATC	1 cut(s)	1233
BsaI	GGTCTC	1 cut(s)	69
BsaJI	CCNNGG	3 cut(s)	138, 401, 855
BsaWI	WCCGGW	1 cut(s)	432
BsaXI	ACNNNNNCTCC	6 cut(s)	419, 449, 1037, 1067, 1307, 1337
Bsc4I	CCNNNNNNNGG	3 cut(s)	139, 396, 1643
Bse118I	RCCGGY	2 cut(s)	201, 266
Bse1I	ACTGG	4 cut(s)	16, 61, 105, 1750
Bse3DI	GCAATG	4 cut(s)	675, 879, 1166, 1654
Bse8I	GATNNNNATC	1 cut(s)	1233
BseBI	CCWGG	1 cut(s)	1132
BseDI	CCNNGG	3 cut(s)	138, 401, 855
BseGI	GGATG	5 cut(s)	78, 175, 493, 941, 1168
BseJI	GATNNNNATC	1 cut(s)	1233
BseLI	CCNNNNNNNGG	3 cut(s)	139, 396, 1643
BseMI	GCAATG	4 cut(s)	675, 879, 1166, 1654
BseMII	CTCAG	5 cut(s)	49, 140, 343, 345, 1744
BseNI	ACTGG	4 cut(s)	16, 61, 105, 1750
BseRI	GAGGAG	5 cut(s)	122, 943, 1013, 1385, 1584
BseSI	GKGCMC	1 cut(s)	1025
BseX3I	CGGCCG	1 cut(s)	264
BseXI	GCAGC	8 cut(s)	52, 175, 178, 181, 184, 652, 1117, 1639
Bsh1285I	CGRYCG	1 cut(s)	267
BsiEI	CGRYCG	1 cut(s)	267
BsiHKAI	GWGCWC	1 cut(s)	99
BsiSI	CCGG	9 cut(s)	74, 140, 202, 267, 390, 433, 603, 1090, 1271
BslI	CCNNNNNNNGG	3 cut(s)	139, 396, 1643
BsmAI	GTCTC	9 cut(s)	69, 374, 404, 499, 688, 826, 1256, 1661, 1692
BsmBI	CGTCTC	2 cut(s)	688, 826
BsmI	GAATGC	1 cut(s)	1280
Bso31I	GGTCTC	1 cut(s)	69
Bsp119I	TTCGAA	1 cut(s)	558
Bsp1286I	GDGCHC	2 cut(s)	99, 1025
Bsp143I	GATC	6 cut(s)	31, 186, 429, 700, 1228, 1234
Bsp1720I	GCTNAGC	1 cut(s)	1730
BspCNI	CTCAG	5 cut(s)	48, 139, 342, 346, 1743
BspHI	TCATGA	7 cut(s)	45, 189, 241, 1198, 1231, 1237, 1600
BspLI	GGNNCC	1 cut(s)	388
BspMAI	CTGCAG	1 cut(s)	1657
BspPI	GGATC	1 cut(s)	424
BspQI	GCTCTTC	1 cut(s)	104
BspT104I	TTCGAA	1 cut(s)	558
BspTNI	GGTCTC	1 cut(s)	69
BsrBI	CCGCTC	1 cut(s)	481
BsrDI	GCAATG	4 cut(s)	675, 879, 1166, 1654
BsrFI	RCCGGY	2 cut(s)	201, 266
BsrI	ACTGG	4 cut(s)	16, 61, 105, 1750
BssAI	RCCGGY	2 cut(s)	201, 266
BssECI	CCNNGG	3 cut(s)	138, 401, 855
BssMI	GATC	6 cut(s)	31, 186, 429, 700, 1228, 1234
Bst2UI	CCWGG	1 cut(s)	1132
Bst4CI	ACNGT	1 cut(s)	310
Bst6I	CTCTTC	6 cut(s)	104, 835, 908, 920, 1059, 1481
BstBAI	YACGTR	1 cut(s)	233
BstBI	TTCGAA	1 cut(s)	558
BstC8I	GCNNGC	4 cut(s)	203, 620, 1025, 1087
BstDEI	CTNAG	5 cut(s)	35, 126, 329, 354, 1730
BstF5I	GGATG	5 cut(s)	78, 175, 493, 941, 1168
BstKTI	GATC	6 cut(s)	34, 189, 432, 703, 1231, 1237
BstMAI	GTCTC	9 cut(s)	69, 374, 404, 499, 688, 826, 1256, 1661, 1692
BstMBI	GATC	6 cut(s)	31, 186, 429, 700, 1228, 1234
BstMCI	CGRYCG	1 cut(s)	267
BstMWI	GCNNNNNNNGC	7 cut(s)	169, 172, 372, 381, 666, 1105, 1740
BstNI	CCWGG	1 cut(s)	1132
BstSCI	CCNGG	5 cut(s)	72, 138, 389, 1089, 1130
BstSFI	CTRYAG	2 cut(s)	625, 1653
BstSLI	GKGCMC	1 cut(s)	1025
BstV1I	GCAGC	8 cut(s)	52, 175, 178, 181, 184, 652, 1117, 1639
BstV2I	GAAGAC	5 cut(s)	18, 246, 590, 613, 843
BstX2I	RGATCY	2 cut(s)	31, 429
BstYI	RGATCY	2 cut(s)	31, 429
BstZI	CGGCCG	1 cut(s)	264
BtrI	CACGTC	1 cut(s)	967
BtsCI	GGATG	5 cut(s)	78, 175, 493, 941, 1168
BtsI	GCAGTG	2 cut(s)	880, 1662
BtsIMutI	CAGTG	3 cut(s)	337, 880, 1662
Cac8I	GCNNGC	4 cut(s)	203, 620, 1025, 1087
CciI	TCATGA	7 cut(s)	45, 189, 241, 1198, 1231, 1237, 1600
Cfr10I	RCCGGY	2 cut(s)	201, 266
Cfr13I	GGNCC	5 cut(s)	142, 199, 387, 476, 1087
CseI	GACGC	1 cut(s)	808
Csp6I	GTAC	3 cut(s)	297, 1191, 1329
CspCI	CAANNNNNGTGG	2 cut(s)	983, 1018
CviQI	GTAC	3 cut(s)	297, 1191, 1329
DdeI	CTNAG	5 cut(s)	35, 126, 329, 354, 1730
DpnI	GATC	6 cut(s)	33, 188, 431, 702, 1230, 1236
DpnII	GATC	6 cut(s)	31, 186, 429, 700, 1228, 1234
EaeI	YGGCCR	4 cut(s)	75, 264, 398, 1268
EagI	CGGCCG	1 cut(s)	264
Eam1104I	CTCTTC	6 cut(s)	104, 835, 908, 920, 1059, 1481
EarI	CTCTTC	6 cut(s)	104, 835, 908, 920, 1059, 1481
EciI	GGCGGA	1 cut(s)	375
Ecl136II	GAGCTC	1 cut(s)	97
EclXI	CGGCCG	1 cut(s)	264
Eco147I	AGGCCT	1 cut(s)	124
Eco24I	GRGCYC	1 cut(s)	99
Eco31I	GGTCTC	1 cut(s)	69
Eco47I	GGWCC	1 cut(s)	387
Eco52I	CGGCCG	1 cut(s)	264
Eco53kI	GAGCTC	1 cut(s)	97
Eco57I	CTGAAG	1 cut(s)	191
Eco72I	CACGTG	1 cut(s)	233
EcoICRI	GAGCTC	1 cut(s)	97
EcoRII	CCWGG	1 cut(s)	1130
EcoT22I	ATGCAT	1 cut(s)	1168
EcoT38I	GRGCYC	1 cut(s)	99
Esp3I	CGTCTC	2 cut(s)	688, 826
FauI	CCCGC	3 cut(s)	377, 702, 1078
FbaI	TGATCA	2 cut(s)	1228, 1234
FokI	GGATG	5 cut(s)	65, 162, 500, 948, 1175
FriOI	GRGCYC	1 cut(s)	99
FspBI	CTAG	3 cut(s)	498, 666, 1194
GsuI	CTGGAG	2 cut(s)	368, 446
HapII	CCGG	9 cut(s)	74, 140, 202, 267, 390, 433, 603, 1090, 1271
HgaI	GACGC	1 cut(s)	808
HpaII	CCGG	9 cut(s)	74, 140, 202, 267, 390, 433, 603, 1090, 1271
HphI	GGTGA	2 cut(s)	389, 1672
Hpy166II	GTNNAC	2 cut(s)	810, 1663
Hpy188I	TCNGA	8 cut(s)	90, 210, 259, 835, 859, 888, 1338, 1638
Hpy8I	GTNNAC	2 cut(s)	810, 1663
Hpy99I	CGWCG	4 cut(s)	94, 719, 872, 968
HpyAV	CCTTC	5 cut(s)	587, 592, 934, 1486, 1688
HpyCH4III	ACNGT	1 cut(s)	310
HpyCH4IV	ACGT	2 cut(s)	232, 966
HpyCH4V	TGCA	6 cut(s)	546, 970, 1166, 1171, 1425, 1655
HpyF10VI	GCNNNNNNNGC	7 cut(s)	169, 172, 372, 381, 666, 1105, 1740
HpyF3I	CTNAG	5 cut(s)	35, 126, 329, 354, 1730
HpySE526I	ACGT	2 cut(s)	232, 966
KroI	GCCGGC	1 cut(s)	201
KroNI	GCCGGC	1 cut(s)	203
Ksp22I	TGATCA	2 cut(s)	1228, 1234
Kzo9I	GATC	6 cut(s)	31, 186, 429, 700, 1228, 1234
LguI	GCTCTTC	1 cut(s)	104
LmnI	GCTCC	4 cut(s)	94, 135, 889, 1096
Lsp1109I	GCAGC	8 cut(s)	52, 175, 178, 181, 184, 652, 1117, 1639
LweI	GCATC	2 cut(s)	184, 1153
MaeI	CTAG	3 cut(s)	498, 666, 1194
MaeII	ACGT	2 cut(s)	232, 966
MaeIII	GTNAC	2 cut(s)	435, 1520
MalI	GATC	6 cut(s)	33, 188, 431, 702, 1230, 1236
MbiI	CCGCTC	1 cut(s)	481
MboI	GATC	6 cut(s)	31, 186, 429, 700, 1228, 1234
MflI	RGATCY	2 cut(s)	31, 429
MhlI	GDGCHC	2 cut(s)	99, 1025
MluCI	AATT	5 cut(s)	554, 1175, 1289, 1501, 1543
MlyI	GAGTC	9 cut(s)	79, 254, 406, 435, 781, 839, 1325, 1547, 1581
MmeI	TCCRAC	2 cut(s)	113, 987
Mph1103I	ATGCAT	1 cut(s)	1168
MroNI	GCCGGC	1 cut(s)	201
MseI	TTAA	2 cut(s)	1178, 1284
MslI	CAYNNNNRTG	2 cut(s)	194, 1236
MspI	CCGG	9 cut(s)	74, 140, 202, 267, 390, 433, 603, 1090, 1271
MspR9I	CCNGG	5 cut(s)	74, 140, 391, 1091, 1132
Mva1269I	GAATGC	1 cut(s)	1280
MvaI	CCWGG	1 cut(s)	1132
MwoI	GCNNNNNNNGC	7 cut(s)	169, 172, 372, 381, 666, 1105, 1740
NaeI	GCCGGC	1 cut(s)	203
NciI	CCSGG	4 cut(s)	74, 140, 391, 1091
NdeII	GATC	6 cut(s)	31, 186, 429, 700, 1228, 1234
NgoMIV	GCCGGC	1 cut(s)	201
NlaIV	GGNNCC	1 cut(s)	388
NmeAIII	GCCGAG	3 cut(s)	242, 351, 426
NmuCI	GTSAC	1 cut(s)	435
NsiI	ATGCAT	1 cut(s)	1168
NspV	TTCGAA	1 cut(s)	558
PagI	TCATGA	7 cut(s)	45, 189, 241, 1198, 1231, 1237, 1600
PceI	AGGCCT	1 cut(s)	124
PciSI	GCTCTTC	1 cut(s)	104
PctI	GAATGC	1 cut(s)	1280
PdiI	GCCGGC	1 cut(s)	203
PfeI	GAWTC	4 cut(s)	238, 501, 630, 1294
PfoI	TCCNGGA	1 cut(s)	389
PleI	GAGTC	9 cut(s)	79, 254, 406, 435, 780, 839, 1324, 1546, 1580
PmaCI	CACGTG	1 cut(s)	233
PmlI	CACGTG	1 cut(s)	233
PpsI	GAGTC	9 cut(s)	79, 254, 406, 435, 780, 839, 1324, 1546, 1580
Ppu21I	YACGTR	1 cut(s)	233
Psp124BI	GAGCTC	1 cut(s)	99
Psp6I	CCWGG	1 cut(s)	1130
PspCI	CACGTG	1 cut(s)	233
PspGI	CCWGG	1 cut(s)	1130
PspN4I	GGNNCC	1 cut(s)	388
PspPI	GGNCC	5 cut(s)	142, 199, 387, 476, 1087
PsrI	GAACNNNNNNTAC	2 cut(s)	1603, 1635
PstI	CTGCAG	1 cut(s)	1657
PsuI	RGATCY	2 cut(s)	31, 429
RsaI	GTAC	3 cut(s)	298, 1192, 1330
RsaNI	GTAC	3 cut(s)	297, 1191, 1329
RseI	CAYNNNNRTG	2 cut(s)	194, 1236
SacI	GAGCTC	1 cut(s)	99
SapI	GCTCTTC	1 cut(s)	104
SaqAI	TTAA	2 cut(s)	1178, 1284
Sau3AI	GATC	6 cut(s)	31, 186, 429, 700, 1228, 1234
Sau96I	GGNCC	5 cut(s)	142, 199, 387, 476, 1087
ScaI	AGTACT	2 cut(s)	1192, 1330
SchI	GAGTC	9 cut(s)	79, 254, 406, 435, 781, 839, 1325, 1547, 1581
ScrFI	CCNGG	5 cut(s)	74, 140, 391, 1091, 1132
SduI	GDGCHC	2 cut(s)	99, 1025
SfaNI	GCATC	2 cut(s)	184, 1153
SfcI	CTRYAG	2 cut(s)	625, 1653
SfuI	TTCGAA	1 cut(s)	558
SinI	GGWCC	1 cut(s)	387
SmiMI	CAYNNNNRTG	2 cut(s)	194, 1236
SmlI	CTYRAG	2 cut(s)	905, 1028
SmoI	CTYRAG	2 cut(s)	905, 1028
SpeI	ACTAGT	1 cut(s)	1193
Sse9I	AATT	5 cut(s)	554, 1175, 1289, 1501, 1543
SseBI	AGGCCT	1 cut(s)	124
SspMI	CTAG	3 cut(s)	498, 666, 1194
SstI	GAGCTC	1 cut(s)	99
StuI	AGGCCT	1 cut(s)	124
StyD4I	CCNGG	5 cut(s)	72, 138, 389, 1089, 1130
TaaI	ACNGT	1 cut(s)	310
TaiI	ACGT	2 cut(s)	235, 969
TaqI	TCGA	6 cut(s)	444, 558, 824, 840, 963, 1319
TaqII	GACCGA	1 cut(s)	240
TasI	AATT	5 cut(s)	554, 1175, 1289, 1501, 1543
TatI	WGTACW	3 cut(s)	296, 1190, 1328
TauI	GCSGC	4 cut(s)	317, 339, 481, 1382
TfiI	GAWTC	4 cut(s)	238, 501, 630, 1294
Tru1I	TTAA	2 cut(s)	1178, 1284
Tru9I	TTAA	2 cut(s)	1178, 1284
TscAI	CASTG	3 cut(s)	337, 880, 1662
TseFI	GTSAC	1 cut(s)	435
TseI	GCWGC	8 cut(s)	40, 163, 166, 169, 172, 640, 1105, 1652
Tsp45I	GTSAC	1 cut(s)	435
TspDTI	ATGAA	9 cut(s)	62, 230, 504, 912, 926, 1215, 1419, 1607, 1617
TspGWI	ACGGA	2 cut(s)	66, 107
TspRI	CASTG	3 cut(s)	337, 880, 1662
VpaK11BI	GGWCC	1 cut(s)	387
XapI	RAATTY	1 cut(s)	554
XbaI	TCTAGA	1 cut(s)	497
XcmI	CCANNNNNNNNNTGG	1 cut(s)	886
XspI	CTAG	3 cut(s)	498, 666, 1194
ZrmI	AGTACT	2 cut(s)	1192, 1330
Zsp2I	ATGCAT	1 cut(s)	1168

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.