Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000003

Orthogroup ID

OG0002927

Physical Location & Seq

Genomic Coordinates Forward (+)

9956169 .. 9961657

Gene Structure 5489 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug03G0123400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1572 bp

ATGGGCTTGTTGCTACTATGTGATGTTTATATCTGCTGTAATATGGGAAGGAAGAATACTAATGAAATTGGGGGAAGTGGATCACAAGTTAAAGCTGTATGGAATGATTATAATGTATCCAAATTTTGTGATCTGTGCATCAAGTTGGTGGATGCTGGACGTCGTCCTAATACTCATTTTGACAGAGAAGGATGGGAGAGTTTGGTAGTAAACTTCAGTAAAGAAACCGGCGATAACTATGATGAAACTCAATTGAAGAATAAATGGGATTCACTTAAAATTGAATGGAAGTTGTGGAAAGAACTAGTTGGCAAGGAAACTGGTTTAGGGTGGAATCCTAGCAAGGGCACTGTTGATGCACCTGCCGAATGGTGGCATAGTAAGATTCAGGTCAATCCCGAATATGCAAAACTGCGTAAAAAAGGTCTTAATCCTGAATTGGAGGAGAAGCTAGATAGAATGTTTTCAAACATTATAGCCACTGGTGAACATGCTTGGGCACCTTCTTGTGGGAACCTTCCATCTCCAAAATCAGACATATGCAAGGATGATGTCATTCCACTTGAAGGCAGTGATGATTCGGTGGATTTTACTCCAATAGAAAGAAGTGGGGGTAAGGAAGGTGTTTCAAGGAGAGGGAAAAAAAGATTGACTGATGAAGCTGAATTACAAGCTAAAGCGGAAAAGAAACCTAAAGGACCCATTGTTTTAGGCAAGCAGAAGATCTCTTTGAGTACTTCTACTTTGGCTCAACTACCAATTACTTCACAAGGTTGGATGCTGAATCCCAAAAGGATTCTGACTCAGAAAAAAATTTCGAATGAACCTCCAGCAGTGAGTGGCAACCAAGATATCTCCTCTGACACTCGTCAATCATGCAATTCTGAAAGTATGTCACCACTTTTAATTGCCGAGGCAGAGCGGTGTTTGTCATTGTATTTTGCTCTGTGCACAAAGGTTTTGCATACACTGACAGATGGGGCAGTTCCCTCTCAAGAGCTGATATTTACCATTAGGAAGTTATATGATTCAAAACTGAAGGAGATTGAGATTCTCACGCCAACATTACCATTTATACCAAAAGATGAGAGCTTTATTTGCCAGTCTTTGTTAGGTTATGTTAATCTTTCCCAACTTGTGAATCTTTCCCTGGATAAGTTCCAAGCAGCAGTAACTGGCACACTACAGGGATCGTCCCATTCTGGTCCTCTTCTCGCTCCAGCTGAAGTATTGATTGCTATCCATGGGATTGATCCCGACAGAGATGGAATTCCTTTAAAGAAGGTCACAGATGCATGCAATGCATGTTTTGAGCAGCGACAGATATTCAACCAACAAGTTCTTGCCAAAGTTCTGAATCAATTGGTTGAGCAGATACCCCTTCCTTTACTGTTCGTGCACACAGTATTGCAAGCTATAGGTCTTTTCCTGCACTGGTCTATATTGGTAGTTTTGGGAATTGTTTCAGATTCTCAGGCACAAACTAGTCAGGCAAATACCGGAGATGCAAGCAACTCAGACAAGGAGGCAGTCACAGAGAAAGCTAGAGAAGAATCATCTAGTGCTTGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0007275 GO:0007389 GO:0008150 GO:0009653 GO:0009791 GO:0009798 GO:0009889 GO:0009908 GO:0009909 GO:0010016 GO:0010033 GO:0010200 GO:0010243 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0022414 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0040008 GO:0042221 GO:0042493 GO:0042802 GO:0042803 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0045926 GO:0046620 GO:0046621 GO:0046983 GO:0048367 GO:0048437 GO:0048438 GO:0048439 GO:0048441 GO:0048442 GO:0048444 GO:0048446 GO:0048464 GO:0048465 GO:0048498 GO:0048519 GO:0048559 GO:0048560 GO:0048580 GO:0048608 GO:0048638 GO:0048640 GO:0048731 GO:0048827 GO:0048831 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051093 GO:0051171 GO:0051239 GO:0051241 GO:0051252 GO:0060255 GO:0061458 GO:0065007 GO:0080090 GO:0090428 GO:0090567 GO:0090696 GO:0090697 GO:0090698 GO:0090707 GO:0097159 GO:0099402 GO:0140110 GO:1901363 GO:1901698 GO:1901700 GO:1903506 GO:1905392 GO:2000026 GO:2000112 GO:2000241 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Myb_DNA-bind_4

Protein Analysis

523

Amino Acids

57.67

Weight (kDa)

5.89

Isoelectric Point (pI)

42.03

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Myb_DNA-bind_3	PF12776	34 - 126	1.9e-19	Myb/SANT-like DNA-binding domain
Symplekin_C	PF12295	375 - 476	5e-25	Symplekin tight junction protein C terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0002927)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G10000 AT3G10000 AT5G03680
fragaria_vesca	FvH4_6g17990 FvH4_6g17990 FvH4_7g05970
malus_domestica	MD02G1247700.v1.1 MD07G1068800.v1.1 MD12G1018900.v1.1 MD14G1016900.v1.1
prunus_persica	Prupe.2G086500_v2.0.a1 Prupe.7G116400_v2.0.a1
pyrus_communis	pycom02g21160 pycom07g05290 pycom12g01570 pycom14g01450
rosa_chinensis	RchiOBHm_Chr1g0333231 RchiOBHm_Chr3g0472271
rosa_laevigata	RLG00000024094 RLG00000029619
rosa_multiflora	Rmu_sc0001214.1_g000051 Rmu_sc0008192.1_g000003
rosa_roxburghii	Rroxscaffold_4G00317680 Rroxscaffold_6G00409120
rosa_rugosa	Rorug01G0108100 Rorug03G0123400
rosa_samantha	Rh1AG131100 Rh1BG100500 Rh1CG125000 Rh1DG136500 Rh3AG175700 Rh3BG201200 Rh3CG192500 Rh3CG199600 Rh3CG199700 Rh3DG173800
rosa_wichuraiana	Rw1G010840 Rw3G016550

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	111
AarI	CACCTGC	1 cut(s)	370
AatII	GACGTC	1 cut(s)	163
Acc36I	ACCTGC	1 cut(s)	370
AccB1I	GGYRCC	1 cut(s)	499
AccBSI	CCGCTC	1 cut(s)	922
AciI	CCGC	2 cut(s)	680, 922
AclWI	GGATC	3 cut(s)	88, 1198, 1247
AcsI	RAATTY	3 cut(s)	122, 813, 1269
AcuI	CTGAAG	3 cut(s)	199, 1058, 1245
AcyI	GRCGYC	1 cut(s)	160
AfaI	GTAC	1 cut(s)	736
AfiI	CCNNNNNNNGG	4 cut(s)	344, 372, 509, 566
AgsI	TTSAA	7 cut(s)	256, 284, 468, 566, 630, 1032, 1330
AhlI	ACTAGT	2 cut(s)	304, 1484
AjnI	CCWGG	1 cut(s)	1149
AluBI	AGCT	9 cut(s)	95, 451, 662, 674, 1000, 1092, 1223, 1415, 1544
AluI	AGCT	9 cut(s)	95, 451, 662, 674, 1000, 1092, 1223, 1415, 1544
Alw21I	GWGCWC	2 cut(s)	953, 1401
Alw44I	GTGCAC	2 cut(s)	949, 1397
AlwI	GGATC	3 cut(s)	88, 1198, 1247
AlwNI	CAGNNNCTG	1 cut(s)	1175
ApaLI	GTGCAC	2 cut(s)	949, 1397
ApeKI	GCWGC	2 cut(s)	1166, 1315
ApoI	RAATTY	3 cut(s)	122, 813, 1269
Asp700I	GAANNNNTTC	2 cut(s)	463, 1462
AspS9I	GGNCC	2 cut(s)	698, 1205
AsuHPI	GGTGA	2 cut(s)	497, 888
AsuII	TTCGAA	1 cut(s)	818
AvaII	GGWCC	2 cut(s)	698, 1205
BaeGI	GKGCMC	4 cut(s)	350, 502, 953, 1401
BanI	GGYRCC	1 cut(s)	499
BarI	GAAGNNNNNNTAC	4 cut(s)	40, 72, 651, 683
Bbv12I	GWGCWC	2 cut(s)	953, 1401
BbvI	GCAGC	2 cut(s)	1178, 1327
BccI	CCATC	4 cut(s)	186, 529, 971, 1259
BciT130I	CCWGG	1 cut(s)	1151
BciVI	GTATCC	1 cut(s)	127
BcuI	ACTAGT	2 cut(s)	304, 1484
BfaI	CTAG	6 cut(s)	305, 339, 452, 1485, 1545, 1560
BfmI	CTRYAG	2 cut(s)	1184, 1416
BfuAI	ACCTGC	1 cut(s)	370
BfuI	GTATCC	1 cut(s)	127
BglII	AGATCT	1 cut(s)	723
BisI	GCNGC	2 cut(s)	1167, 1316
BlsI	GCNGC	2 cut(s)	1168, 1317
BmcAI	AGTACT	1 cut(s)	736
Bme1390I	CCNGG	1 cut(s)	1151
Bme18I	GGWCC	2 cut(s)	698, 1205
BmgT120I	GGNCC	2 cut(s)	698, 1205
BmiI	GGNNCC	3 cut(s)	501, 515, 700
BmrFI	CCNGG	1 cut(s)	1151
BmsI	GCATC	6 cut(s)	142, 147, 346, 768, 1282, 1495
BoxI	GACNNNNGTC	1 cut(s)	867
BpmI	CTGGAG	2 cut(s)	813, 1203
Bpu14I	TTCGAA	1 cut(s)	818
BpuEI	CTTGAG	1 cut(s)	978
BsaBI	GATNNNNATC	1 cut(s)	1238
BsaHI	GRCGYC	1 cut(s)	160
BsaJI	CCNNGG	3 cut(s)	912, 1149, 1243
BsaWI	WCCGGW	1 cut(s)	1499
Bsc4I	CCNNNNNNNGG	4 cut(s)	344, 372, 509, 566
Bse118I	RCCGGY	1 cut(s)	227
Bse1I	ACTGG	5 cut(s)	325, 487, 1102, 1180, 1439
Bse3DI	GCAATG	1 cut(s)	1306
Bse8I	GATNNNNATC	1 cut(s)	1238
BseBI	CCWGG	1 cut(s)	1151
BseDI	CCNNGG	3 cut(s)	912, 1149, 1243
BseGI	GGATG	4 cut(s)	157, 197, 553, 783
BseJI	GATNNNNATC	1 cut(s)	1238
BseLI	CCNNNNNNNGG	4 cut(s)	344, 372, 509, 566
BseMI	GCAATG	1 cut(s)	1306
BseMII	CTCAG	3 cut(s)	818, 1487, 1530
BseNI	ACTGG	5 cut(s)	325, 487, 1102, 1180, 1439
BseRI	GAGGAG	2 cut(s)	458, 847
BseSI	GKGCMC	4 cut(s)	350, 502, 953, 1401
BseXI	GCAGC	2 cut(s)	1178, 1327
BsgI	GTGCAG	1 cut(s)	1415
BshNI	GGYRCC	1 cut(s)	499
BsiHKAI	GWGCWC	2 cut(s)	953, 1401
BsiSI	CCGG	2 cut(s)	228, 1500
BslFI	GGGAC	1 cut(s)	1180
BslI	CCNNNNNNNGG	4 cut(s)	344, 372, 509, 566
BsmFI	GGGAC	1 cut(s)	1180
Bsp119I	TTCGAA	1 cut(s)	818
Bsp1286I	GDGCHC	4 cut(s)	350, 502, 953, 1401
Bsp143I	GATC	5 cut(s)	80, 130, 723, 1190, 1252
Bsp19I	CCATGG	1 cut(s)	1243
BspACI	CCGC	2 cut(s)	680, 922
BspCNI	CTCAG	3 cut(s)	817, 1486, 1529
BspLI	GGNNCC	3 cut(s)	501, 515, 700
BspMI	ACCTGC	1 cut(s)	370
BspPI	GGATC	3 cut(s)	88, 1198, 1247
BspT104I	TTCGAA	1 cut(s)	818
BspT107I	GGYRCC	1 cut(s)	499
BsrBI	CCGCTC	1 cut(s)	922
BsrDI	GCAATG	1 cut(s)	1306
BsrFI	RCCGGY	1 cut(s)	227
BsrI	ACTGG	5 cut(s)	325, 487, 1102, 1180, 1439
BssAI	RCCGGY	1 cut(s)	227
BssECI	CCNNGG	3 cut(s)	912, 1149, 1243
BssMI	GATC	5 cut(s)	80, 130, 723, 1190, 1252
BssNI	GRCGYC	1 cut(s)	160
BssT1I	CCWWGG	1 cut(s)	1243
Bst2UI	CCWGG	1 cut(s)	1151
Bst4CI	ACNGT	3 cut(s)	352, 1392, 1405
Bst6I	CTCTTC	1 cut(s)	1215
BstACI	GRCGYC	1 cut(s)	160
BstAPI	GCANNNNNTGC	1 cut(s)	1301
BstBI	TTCGAA	1 cut(s)	818
BstC8I	GCNNGC	4 cut(s)	716, 1297, 1413, 1510
BstDEI	CTNAG	3 cut(s)	804, 1473, 1516
BstDSI	CCRYGG	1 cut(s)	1243
BstF5I	GGATG	4 cut(s)	157, 197, 553, 783
BstKTI	GATC	5 cut(s)	83, 133, 726, 1193, 1255
BstMBI	GATC	5 cut(s)	80, 130, 723, 1190, 1252
BstMWI	GCNNNNNNNGC	2 cut(s)	1098, 1301
BstNI	CCWGG	1 cut(s)	1151
BstNSI	RCATGY	3 cut(s)	494, 1299, 1308
BstPAI	GACNNNNGTC	1 cut(s)	867
BstSCI	CCNGG	1 cut(s)	1149
BstSFI	CTRYAG	2 cut(s)	1184, 1416
BstSLI	GKGCMC	4 cut(s)	350, 502, 953, 1401
BstV1I	GCAGC	2 cut(s)	1178, 1327
BstX2I	RGATCY	1 cut(s)	723
BstYI	RGATCY	1 cut(s)	723
BsuI	GTATCC	1 cut(s)	127
BtgI	CCRYGG	1 cut(s)	1243
BtsCI	GGATG	4 cut(s)	157, 197, 553, 783
BtsI	GCAGTG	2 cut(s)	577, 840
BtsIMutI	CAGTG	6 cut(s)	348, 480, 577, 840, 968, 1432
BveI	ACCTGC	1 cut(s)	370
Cac8I	GCNNGC	4 cut(s)	716, 1297, 1413, 1510
CaiI	CAGNNNCTG	1 cut(s)	1175
Cfr10I	RCCGGY	1 cut(s)	227
Cfr13I	GGNCC	2 cut(s)	698, 1205
Csp6I	GTAC	1 cut(s)	735
CviAII	CATG	5 cut(s)	491, 876, 1244, 1296, 1305
CviQI	GTAC	1 cut(s)	735
DdeI	CTNAG	3 cut(s)	804, 1473, 1516
DpnI	GATC	5 cut(s)	82, 132, 725, 1192, 1254
DpnII	GATC	5 cut(s)	80, 130, 723, 1190, 1252
DraI	TTTAAA	1 cut(s)	1278
Eam1104I	CTCTTC	1 cut(s)	1215
EarI	CTCTTC	1 cut(s)	1215
Eco130I	CCWWGG	1 cut(s)	1243
Eco32I	GATATC	1 cut(s)	853
Eco47I	GGWCC	2 cut(s)	698, 1205
Eco57I	CTGAAG	3 cut(s)	199, 1058, 1245
EcoO109I	RGGNCCY	1 cut(s)	698
EcoRI	GAATTC	1 cut(s)	1269
EcoRII	CCWGG	1 cut(s)	1149
EcoRV	GATATC	1 cut(s)	853
EcoT14I	CCWWGG	1 cut(s)	1243
EcoT22I	ATGCAT	2 cut(s)	1297, 1306
ErhI	CCWWGG	1 cut(s)	1243
FaeI	CATG	5 cut(s)	494, 879, 1247, 1299, 1308
FaqI	GGGAC	1 cut(s)	1180
FatI	CATG	5 cut(s)	490, 875, 1243, 1295, 1304
FauNDI	CATATG	1 cut(s)	539
Fnu4HI	GCNGC	2 cut(s)	1167, 1316
FokI	GGATG	4 cut(s)	164, 204, 560, 790
Fsp4HI	GCNGC	2 cut(s)	1167, 1316
FspBI	CTAG	6 cut(s)	305, 339, 452, 1485, 1545, 1560
GluI	GCNGC	2 cut(s)	1167, 1316
GsuI	CTGGAG	2 cut(s)	813, 1203
HapII	CCGG	2 cut(s)	228, 1500
Hin1I	GRCGYC	1 cut(s)	160
Hin1II	CATG	5 cut(s)	494, 879, 1247, 1299, 1308
HpaII	CCGG	2 cut(s)	228, 1500
HphI	GGTGA	2 cut(s)	497, 888
Hpy166II	GTNNAC	4 cut(s)	211, 488, 951, 1399
Hpy188I	TCNGA	8 cut(s)	535, 801, 807, 862, 886, 1356, 1468, 1519
Hpy188III	TCNNGA	4 cut(s)	398, 434, 995, 1256
Hpy8I	GTNNAC	4 cut(s)	211, 488, 951, 1399
Hpy99I	CGWCG	1 cut(s)	165
HpyAV	CCTTC	9 cut(s)	42, 182, 513, 527, 560, 614, 1033, 1276, 1391
HpyCH4III	ACNGT	3 cut(s)	352, 1392, 1405
HpyCH4IV	ACGT	1 cut(s)	160
HpyF10VI	GCNNNNNNNGC	2 cut(s)	1098, 1301
HpyF3I	CTNAG	3 cut(s)	804, 1473, 1516
HpySE526I	ACGT	1 cut(s)	160
Hsp92I	GRCGYC	1 cut(s)	160
Hsp92II	CATG	5 cut(s)	494, 879, 1247, 1299, 1308
Kzo9I	GATC	5 cut(s)	80, 130, 723, 1190, 1252
LmnI	GCTCC	1 cut(s)	1222
Lsp1109I	GCAGC	2 cut(s)	1178, 1327
LweI	GCATC	6 cut(s)	142, 147, 346, 768, 1282, 1495
MaeI	CTAG	6 cut(s)	305, 339, 452, 1485, 1545, 1560
MaeII	ACGT	1 cut(s)	160
MaeIII	GTNAC	4 cut(s)	894, 1171, 1285, 1531
MalI	GATC	5 cut(s)	82, 132, 725, 1192, 1254
MbiI	CCGCTC	1 cut(s)	922
MboI	GATC	5 cut(s)	80, 130, 723, 1190, 1252
MboII	GAAGA	5 cut(s)	64, 268, 733, 1202, 1562
MfeI	CAATTG	2 cut(s)	251, 1361
MflI	RGATCY	1 cut(s)	723
MhlI	GDGCHC	4 cut(s)	350, 502, 953, 1401
MlyI	GAGTC	1 cut(s)	796
MmeI	TCCRAC	1 cut(s)	755
MnlI	CCTC	8 cut(s)	436, 629, 837, 868, 907, 1000, 1218, 1519
Mph1103I	ATGCAT	2 cut(s)	1297, 1306
MroXI	GAANNNNTTC	2 cut(s)	463, 1462
MseI	TTAA	6 cut(s)	90, 276, 429, 905, 1122, 1277
MspA1I	CMGCKG	1 cut(s)	1223
MspI	CCGG	2 cut(s)	228, 1500
MspR9I	CCNGG	1 cut(s)	1151
MunI	CAATTG	2 cut(s)	251, 1361
MvaI	CCWGG	1 cut(s)	1151
MwoI	GCNNNNNNNGC	2 cut(s)	1098, 1301
NcoI	CCATGG	1 cut(s)	1243
NdeI	CATATG	1 cut(s)	539
NdeII	GATC	5 cut(s)	80, 130, 723, 1190, 1252
NlaIII	CATG	5 cut(s)	494, 879, 1247, 1299, 1308
NlaIV	GGNNCC	3 cut(s)	501, 515, 700
NmeAIII	GCCGAG	1 cut(s)	937
NmuCI	GTSAC	3 cut(s)	894, 1285, 1531
NsiI	ATGCAT	2 cut(s)	1297, 1306
NspI	RCATGY	3 cut(s)	494, 1299, 1308
NspV	TTCGAA	1 cut(s)	818
PaeI	GCATGC	1 cut(s)	1299
PaqCI	CACCTGC	1 cut(s)	370
PdmI	GAANNNNTTC	2 cut(s)	463, 1462
PflFI	GACNNNGTC	1 cut(s)	162
PkrI	GCNGC	2 cut(s)	1168, 1317
PleI	GAGTC	1 cut(s)	796
PpsI	GAGTC	1 cut(s)	796
PpuMI	RGGWCCY	1 cut(s)	698
PshAI	GACNNNNGTC	1 cut(s)	867
PsiI	TTATAA	1 cut(s)	111
Psp5II	RGGWCCY	1 cut(s)	698
Psp6I	CCWGG	1 cut(s)	1149
PspGI	CCWGG	1 cut(s)	1149
PspN4I	GGNNCC	3 cut(s)	501, 515, 700
PspPI	GGNCC	2 cut(s)	698, 1205
PspPPI	RGGWCCY	1 cut(s)	698
PstNI	CAGNNNCTG	1 cut(s)	1175
PsuI	RGATCY	1 cut(s)	723
PsyI	GACNNNGTC	1 cut(s)	162
PvuII	CAGCTG	1 cut(s)	1223
RsaI	GTAC	1 cut(s)	736
RsaNI	GTAC	1 cut(s)	735
SaqAI	TTAA	6 cut(s)	90, 276, 429, 905, 1122, 1277
SatI	GCNGC	2 cut(s)	1167, 1316
Sau3AI	GATC	5 cut(s)	80, 130, 723, 1190, 1252
Sau96I	GGNCC	2 cut(s)	698, 1205
ScaI	AGTACT	1 cut(s)	736
SchI	GAGTC	1 cut(s)	796
ScrFI	CCNGG	1 cut(s)	1151
SduI	GDGCHC	4 cut(s)	350, 502, 953, 1401
SfaNI	GCATC	6 cut(s)	142, 147, 346, 768, 1282, 1495
SfcI	CTRYAG	2 cut(s)	1184, 1416
SfuI	TTCGAA	1 cut(s)	818
SinI	GGWCC	2 cut(s)	698, 1205
SmlI	CTYRAG	1 cut(s)	993
SmoI	CTYRAG	1 cut(s)	993
SpeI	ACTAGT	2 cut(s)	304, 1484
SphI	GCATGC	1 cut(s)	1299
SsiI	CCGC	2 cut(s)	680, 922
SspMI	CTAG	6 cut(s)	305, 339, 452, 1485, 1545, 1560
StyD4I	CCNGG	1 cut(s)	1149
StyI	CCWWGG	1 cut(s)	1243
TaaI	ACNGT	3 cut(s)	352, 1392, 1405
TaiI	ACGT	1 cut(s)	163
TaqI	TCGA	1 cut(s)	818
TatI	WGTACW	1 cut(s)	734
Tru1I	TTAA	6 cut(s)	90, 276, 429, 905, 1122, 1277
Tru9I	TTAA	6 cut(s)	90, 276, 429, 905, 1122, 1277
TscAI	CASTG	6 cut(s)	355, 487, 577, 840, 975, 1439
TseFI	GTSAC	3 cut(s)	894, 1285, 1531
TseI	GCWGC	2 cut(s)	1166, 1315
Tsp45I	GTSAC	3 cut(s)	894, 1285, 1531
TspDTI	ATGAA	4 cut(s)	78, 258, 672, 837
TspRI	CASTG	6 cut(s)	355, 487, 577, 840, 975, 1439
Tth111I	GACNNNGTC	1 cut(s)	162
VneI	GTGCAC	2 cut(s)	949, 1397
VpaK11BI	GGWCC	2 cut(s)	698, 1205
XapI	RAATTY	3 cut(s)	122, 813, 1269
XceI	RCATGY	3 cut(s)	494, 1299, 1308
XmnI	GAANNNNTTC	2 cut(s)	463, 1462
XspI	CTAG	6 cut(s)	305, 339, 452, 1485, 1545, 1560
ZraI	GACGTC	1 cut(s)	161
ZrmI	AGTACT	1 cut(s)	736
Zsp2I	ATGCAT	2 cut(s)	1297, 1306

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.