Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr3

Orthogroup ID

OG0002927

Physical Location & Seq

Genomic Coordinates Forward (+)

17596006 .. 17598777

Gene Structure 2772 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw3G016550.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1752 bp

ATGGAAATGGAAGACCAGTATGGTTTAGGAGATCTCAGGCAGCTCATGAACGGAACTGGTAGGTCTCACTTCCCGGCCATCCAGACTCCGACGGAGCTCTTCCCCAGTAGCCACCACCATAGGCCTCAGCTCCTCGCTCCGGCCCATCATCATCATCATCAGCAGCAGCAGCATCCCTACGAAATCATGATGATGGGCCGGCTTCAGACCGCCCACGACATCATGCCACGTGGGATTCATGAGTTTCGGTCTTCTGACTCGGCCGGTGGTTGTGGTGGTGGTGGTGGTGCTTGTACTAATAATACTGTTGCGGCTACTTCTTCTCTCAGTGGCGGCGGTGGTCTGGAGGCTGAGGGCGGAGGCTGTCTCGGCGGGGATGGCGGGTCCGGGAGGTGGCCGAGGCAAGAGACTCTCACGCTTCTGGAGATCCGGTCACGACTCGATTACAAGTTCAAAGAGGCTAATCAAAAAGGGCCGCTCTGGGATGAAGTCTCGAGGATCATGTGTGAGGAACATGGGTATCAAAGAAGCGGAAAAAAATGCAGGGAAAAATTCGAAAACTTATACAAGTATTACAAGAAGACAAAGGAAGGGAAGGCCGGAAGACAAGATGGCAAGCACTATAGATTCTTTCGGCAGCTTGAAGCTCTCTATGGCGAAACTAGCAACAACATTGCCGTCTCATCACTCCCACCAGATCAATCCCATTTCGTCGGTAATAATAATATCAATAACAATAATAATACTTTTCGTTATCAAGCTCAACCGAGTCATCAAGATACTACTACCGCTACTACCTATCAGTCCACTCAAAGCGTCTCGAACTCTTCCGATTTCGAGGACTCGTCTTCCTCGGAGGACAACGACGGCAGTGCCATTGCTCCGATGGACGATGAAGTGCTTGAGATGAAGAGGACGAGGAAGAGGAGGGGATGGAAGGTAAAGATAAAGGAGTTTATCGACGTGCAAATGAGGAAGATGATGGAGAAGCAAGAGGAGTGGTTGGAGAAGCTGATGGGCACGCTTGAGCAGAAAGAAAGGGAGAGGGTGTTGAGAGAGGAAGAGTGGCGAAAACAAGAGGCGGGCCGGGTGGAGCGAGAGCAGCAGTTTTGGGCTAAAGAGAGAGCTTGGATTGAAGCAAGGGATAAAGCTCTCATGGATGCATTGCAGAAATTAACAGGAAGTAGTACTAGTCATGAAGTAAAGACTTCTTCTTCAACCCCTGATCATGATCATGAGGATATTGTGAGTGAGCAAGAGACATGGACGGAATGCGAGATTAACAAATTGATTCAGTTGAGAGGAAGCATGGAGTCGAGGTTTAGTACTAATCAGAGAGGTGGGTGTGTGGAGGAAAGACTTTGGGAGGAGATAGCGGCGAAGATGAGTTGTTTGGGATGTGAAAGGAGTGGAATGGTCTGCAAAGAGAAATGGGAGAGCATAAACTATGTGAGGAAGTGTTCCAAAGAGTTGTTCAGTAAGAAGAGGAAGGAGAACAATTCAAGGTCAAGCTCTTGTTACTTTGGGAACAATGAGTCAAATTCCTCATTGTATAGTAGTCAAGGAGGAGTCTATGCTACATGTGAAATGAATAATCATGAACAAGGTAATGATGGTTCTCCCTCTAATAATCCAAATGTAGGCAATGCTGCAGTGGTGAACGACACTTGTTTTCCATTTTTGATGGGCGAAGGAGACAATTTGTGGGAGAACTACGGGTTGAAGCTCAGCAAGGGTAGCCAAAACCAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0007275 GO:0007389 GO:0008150 GO:0009653 GO:0009791 GO:0009798 GO:0009889 GO:0009908 GO:0009909 GO:0010016 GO:0010033 GO:0010200 GO:0010243 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0022414 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0040008 GO:0042221 GO:0042493 GO:0042802 GO:0042803 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0045926 GO:0046620 GO:0046621 GO:0046983 GO:0048367 GO:0048437 GO:0048438 GO:0048439 GO:0048441 GO:0048442 GO:0048444 GO:0048446 GO:0048464 GO:0048465 GO:0048498 GO:0048519 GO:0048559 GO:0048560 GO:0048580 GO:0048608 GO:0048638 GO:0048640 GO:0048731 GO:0048827 GO:0048831 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051093 GO:0051171 GO:0051239 GO:0051241 GO:0051252 GO:0060255 GO:0061458 GO:0065007 GO:0080090 GO:0090428 GO:0090567 GO:0090696 GO:0090697 GO:0090698 GO:0090707 GO:0097159 GO:0099402 GO:0140110 GO:1901363 GO:1901698 GO:1901700 GO:1903506 GO:1905392 GO:2000026 GO:2000112 GO:2000241 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Myb_DNA-bind_4

Protein Analysis

583

Amino Acids

66.09

Weight (kDa)

6.17

Isoelectric Point (pI)

54.49

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Myb_DNA-bind_4	PF13837	131 - 217	4.8e-21	Myb/SANT-like DNA-binding domain
Myb_DNA-bind_4	PF13837	421 - 497	2.2e-12	Myb/SANT-like DNA-binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002927)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G10000 AT3G10000 AT5G03680
fragaria_vesca	FvH4_6g17990 FvH4_6g17990 FvH4_7g05970
malus_domestica	MD02G1247700.v1.1 MD07G1068800.v1.1 MD12G1018900.v1.1 MD14G1016900.v1.1
prunus_persica	Prupe.2G086500_v2.0.a1 Prupe.7G116400_v2.0.a1
pyrus_communis	pycom02g21160 pycom07g05290 pycom12g01570 pycom14g01450
rosa_chinensis	RchiOBHm_Chr1g0333231 RchiOBHm_Chr3g0472271
rosa_laevigata	RLG00000024094 RLG00000029619
rosa_multiflora	Rmu_sc0001214.1_g000051 Rmu_sc0008192.1_g000003
rosa_roxburghii	Rroxscaffold_4G00317680 Rroxscaffold_6G00409120
rosa_rugosa	Rorug01G0108100 Rorug03G0123400
rosa_samantha	Rh1AG131100 Rh1BG100500 Rh1CG125000 Rh1DG136500 Rh3AG175700 Rh3BG201200 Rh3CG192500 Rh3CG199600 Rh3CG199700 Rh3DG173800
rosa_wichuraiana	Rw1G010840 Rw3G016550

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccBSI	CCGCTC	1 cut(s)	478
AclWI	GGATC	2 cut(s)	421, 506
AcoI	YGGCCR	3 cut(s)	75, 261, 395
AcsI	RAATTY	2 cut(s)	551, 1540
AcuI	CTGAAG	1 cut(s)	188
AcvI	CACGTG	1 cut(s)	230
AfaI	GTAC	3 cut(s)	295, 1189, 1327
AfiI	CCNNNNNNNGG	3 cut(s)	139, 393, 1640
AflIII	ACRYGT	1 cut(s)	1580
AgsI	TTSAA	6 cut(s)	454, 644, 1136, 1218, 1503, 1723
AhlI	ACTAGT	1 cut(s)	1190
AjiI	CACGTC	1 cut(s)	964
AjuI	GAANNNNNNNTTGG	2 cut(s)	1457, 1489
Alw21I	GWGCWC	1 cut(s)	99
Alw26I	GTCTC	8 cut(s)	69, 371, 401, 496, 685, 823, 1253, 1689
AlwI	GGATC	2 cut(s)	421, 506
Ama87I	CYCGRG	1 cut(s)	493
AoxI	GGCC	9 cut(s)	75, 122, 141, 196, 261, 395, 473, 597, 1084
ApeKI	GCWGC	7 cut(s)	40, 163, 166, 169, 637, 1102, 1649
ApoI	RAATTY	2 cut(s)	551, 1540
AspS9I	GGNCC	5 cut(s)	142, 196, 384, 473, 1084
AsuC2I	CCSGG	3 cut(s)	74, 388, 1088
AsuHPI	GGTGA	1 cut(s)	1669
AsuII	TTCGAA	1 cut(s)	555
AvaI	CYCGRG	1 cut(s)	493
AvaII	GGWCC	1 cut(s)	384
BaeGI	GKGCMC	1 cut(s)	1022
BaeI	ACNNNNGTAYC	2 cut(s)	503, 536
BanII	GRGCYC	1 cut(s)	99
BbrPI	CACGTG	1 cut(s)	230
BbsI	GAAGAC	5 cut(s)	18, 243, 587, 610, 840
Bbv12I	GWGCWC	1 cut(s)	99
BbvCI	CCTCAGC	2 cut(s)	126, 351
BbvI	GCAGC	7 cut(s)	52, 175, 178, 181, 649, 1114, 1636
BceAI	ACGGC	2 cut(s)	662, 883
BcgI	CGANNNNNNTGC	2 cut(s)	854, 888
BclI	TGATCA	2 cut(s)	1225, 1231
BcnI	CCSGG	3 cut(s)	74, 388, 1088
BcoDI	GTCTC	8 cut(s)	69, 371, 401, 496, 685, 823, 1253, 1689
BcuI	ACTAGT	1 cut(s)	1190
BfaI	CTAG	2 cut(s)	663, 1191
BfmI	CTRYAG	2 cut(s)	622, 1650
BglII	AGATCT	1 cut(s)	31
BlpI	GCTNAGC	1 cut(s)	1727
BmcAI	AGTACT	2 cut(s)	1189, 1327
Bme1390I	CCNGG	3 cut(s)	74, 388, 1088
Bme18I	GGWCC	1 cut(s)	384
BmeT110I	CYCGRG	1 cut(s)	493
BmgBI	CACGTC	1 cut(s)	964
BmgT120I	GGNCC	5 cut(s)	142, 196, 384, 473, 1084
BmiI	GGNNCC	1 cut(s)	385
BmrFI	CCNGG	3 cut(s)	74, 388, 1088
BmrI	ACTGGG	1 cut(s)	99
BmsI	GCATC	2 cut(s)	181, 1150
BmuI	ACTGGG	1 cut(s)	99
BpiI	GAAGAC	5 cut(s)	18, 243, 587, 610, 840
BplI	GAGNNNNNCTC	2 cut(s)	351, 383
BpmI	CTGGAG	2 cut(s)	365, 443
Bpu10I	CCTNAGC	2 cut(s)	126, 351
Bpu1102I	GCTNAGC	1 cut(s)	1727
Bpu14I	TTCGAA	1 cut(s)	555
BpuEI	CTTGAG	2 cut(s)	923, 1046
BpuMI	CCSGG	3 cut(s)	74, 388, 1088
BsaAI	YACGTR	1 cut(s)	230
BsaBI	GATNNNNATC	1 cut(s)	1230
BsaI	GGTCTC	1 cut(s)	69
BsaJI	CCNNGG	2 cut(s)	398, 852
BsaWI	WCCGGW	1 cut(s)	429
BsaXI	ACNNNNNCTCC	6 cut(s)	416, 446, 1034, 1064, 1304, 1334
Bsc4I	CCNNNNNNNGG	3 cut(s)	139, 393, 1640
Bse118I	RCCGGY	2 cut(s)	198, 263
Bse1I	ACTGG	4 cut(s)	16, 61, 105, 1747
Bse3DI	GCAATG	4 cut(s)	672, 876, 1163, 1651
Bse8I	GATNNNNATC	1 cut(s)	1230
BseDI	CCNNGG	2 cut(s)	398, 852
BseGI	GGATG	7 cut(s)	78, 172, 382, 490, 938, 1165, 1403
BseJI	GATNNNNATC	1 cut(s)	1230
BseLI	CCNNNNNNNGG	3 cut(s)	139, 393, 1640
BseMI	GCAATG	4 cut(s)	672, 876, 1163, 1651
BseMII	CTCAG	5 cut(s)	49, 140, 340, 342, 1741
BseNI	ACTGG	4 cut(s)	16, 61, 105, 1747
BseRI	GAGGAG	5 cut(s)	122, 940, 1010, 1382, 1581
BseSI	GKGCMC	1 cut(s)	1022
BseX3I	CGGCCG	1 cut(s)	261
BseXI	GCAGC	7 cut(s)	52, 175, 178, 181, 649, 1114, 1636
Bsh1285I	CGRYCG	1 cut(s)	264
BshFI	GGCC	9 cut(s)	77, 124, 143, 198, 263, 397, 475, 599, 1086
BsiEI	CGRYCG	1 cut(s)	264
BsiHKAI	GWGCWC	1 cut(s)	99
BsiHKCI	CYCGRG	1 cut(s)	493
BsiSI	CCGG	8 cut(s)	74, 140, 199, 264, 387, 430, 600, 1087
BslI	CCNNNNNNNGG	3 cut(s)	139, 393, 1640
BsmAI	GTCTC	8 cut(s)	69, 371, 401, 496, 685, 823, 1253, 1689
BsmBI	CGTCTC	2 cut(s)	685, 823
BsmI	GAATGC	1 cut(s)	1277
BsnI	GGCC	9 cut(s)	77, 124, 143, 198, 263, 397, 475, 599, 1086
Bso31I	GGTCTC	1 cut(s)	69
BsoBI	CYCGRG	1 cut(s)	493
Bsp119I	TTCGAA	1 cut(s)	555
Bsp1286I	GDGCHC	2 cut(s)	99, 1022
Bsp143I	GATC	6 cut(s)	31, 426, 498, 697, 1225, 1231
Bsp1720I	GCTNAGC	1 cut(s)	1727
BspANI	GGCC	9 cut(s)	77, 124, 143, 198, 263, 397, 475, 599, 1086
BspCNI	CTCAG	5 cut(s)	48, 139, 339, 343, 1740
BspHI	TCATGA	7 cut(s)	45, 186, 238, 1195, 1228, 1234, 1597
BspLI	GGNNCC	1 cut(s)	385
BspMAI	CTGCAG	1 cut(s)	1654
BspPI	GGATC	2 cut(s)	421, 506
BspQI	GCTCTTC	1 cut(s)	104
BspT104I	TTCGAA	1 cut(s)	555
BspTNI	GGTCTC	1 cut(s)	69
BsrBI	CCGCTC	1 cut(s)	478
BsrDI	GCAATG	4 cut(s)	672, 876, 1163, 1651
BsrFI	RCCGGY	2 cut(s)	198, 263
BsrI	ACTGG	4 cut(s)	16, 61, 105, 1747
BssAI	RCCGGY	2 cut(s)	198, 263
BssECI	CCNNGG	2 cut(s)	398, 852
BssMI	GATC	6 cut(s)	31, 426, 498, 697, 1225, 1231
Bst4CI	ACNGT	1 cut(s)	307
Bst6I	CTCTTC	6 cut(s)	104, 832, 905, 917, 1056, 1478
BstBAI	YACGTR	1 cut(s)	230
BstBI	TTCGAA	1 cut(s)	555
BstC8I	GCNNGC	4 cut(s)	200, 617, 1022, 1084
BstDEI	CTNAG	5 cut(s)	35, 126, 326, 351, 1727
BstF5I	GGATG	7 cut(s)	78, 172, 382, 490, 938, 1165, 1403
BstKTI	GATC	6 cut(s)	34, 429, 501, 700, 1228, 1234
BstMAI	GTCTC	8 cut(s)	69, 371, 401, 496, 685, 823, 1253, 1689
BstMBI	GATC	6 cut(s)	31, 426, 498, 697, 1225, 1231
BstMCI	CGRYCG	1 cut(s)	264
BstMWI	GCNNNNNNNGC	6 cut(s)	169, 369, 378, 663, 1102, 1737
BstNSI	RCATGY	1 cut(s)	1584
BstSCI	CCNGG	3 cut(s)	72, 386, 1086
BstSFI	CTRYAG	2 cut(s)	622, 1650
BstSLI	GKGCMC	1 cut(s)	1022
BstV1I	GCAGC	7 cut(s)	52, 175, 178, 181, 649, 1114, 1636
BstV2I	GAAGAC	5 cut(s)	18, 243, 587, 610, 840
BstX2I	RGATCY	2 cut(s)	31, 426
BstYI	RGATCY	2 cut(s)	31, 426
BstZI	CGGCCG	1 cut(s)	261
BsuRI	GGCC	9 cut(s)	77, 124, 143, 198, 263, 397, 475, 599, 1086
BtrI	CACGTC	1 cut(s)	964
BtsCI	GGATG	7 cut(s)	78, 172, 382, 490, 938, 1165, 1403
BtsI	GCAGTG	2 cut(s)	877, 1659
BtsIMutI	CAGTG	3 cut(s)	334, 877, 1659
Cac8I	GCNNGC	4 cut(s)	200, 617, 1022, 1084
CciI	TCATGA	7 cut(s)	45, 186, 238, 1195, 1228, 1234, 1597
Cfr10I	RCCGGY	2 cut(s)	198, 263
Cfr13I	GGNCC	5 cut(s)	142, 196, 384, 473, 1084
CseI	GACGC	1 cut(s)	805
Csp6I	GTAC	3 cut(s)	294, 1188, 1326
CspCI	CAANNNNNGTGG	2 cut(s)	980, 1015
CviQI	GTAC	3 cut(s)	294, 1188, 1326
DdeI	CTNAG	5 cut(s)	35, 126, 326, 351, 1727
DpnI	GATC	6 cut(s)	33, 428, 500, 699, 1227, 1233
DpnII	GATC	6 cut(s)	31, 426, 498, 697, 1225, 1231
EaeI	YGGCCR	3 cut(s)	75, 261, 395
EagI	CGGCCG	1 cut(s)	261
Eam1104I	CTCTTC	6 cut(s)	104, 832, 905, 917, 1056, 1478
EarI	CTCTTC	6 cut(s)	104, 832, 905, 917, 1056, 1478
EciI	GGCGGA	1 cut(s)	372
Ecl136II	GAGCTC	1 cut(s)	97
EclXI	CGGCCG	1 cut(s)	261
Eco147I	AGGCCT	1 cut(s)	124
Eco24I	GRGCYC	1 cut(s)	99
Eco31I	GGTCTC	1 cut(s)	69
Eco47I	GGWCC	1 cut(s)	384
Eco52I	CGGCCG	1 cut(s)	261
Eco53kI	GAGCTC	1 cut(s)	97
Eco57I	CTGAAG	1 cut(s)	188
Eco72I	CACGTG	1 cut(s)	230
Eco88I	CYCGRG	1 cut(s)	493
EcoICRI	GAGCTC	1 cut(s)	97
EcoT22I	ATGCAT	1 cut(s)	1165
EcoT38I	GRGCYC	1 cut(s)	99
Esp3I	CGTCTC	2 cut(s)	685, 823
FauI	CCCGC	3 cut(s)	365, 374, 1075
FbaI	TGATCA	2 cut(s)	1225, 1231
FokI	GGATG	7 cut(s)	65, 159, 389, 497, 945, 1172, 1410
FriOI	GRGCYC	1 cut(s)	99
FspBI	CTAG	2 cut(s)	663, 1191
GsuI	CTGGAG	2 cut(s)	365, 443
HaeIII	GGCC	9 cut(s)	77, 124, 143, 198, 263, 397, 475, 599, 1086
HapII	CCGG	8 cut(s)	74, 140, 199, 264, 387, 430, 600, 1087
HgaI	GACGC	1 cut(s)	805
HpaII	CCGG	8 cut(s)	74, 140, 199, 264, 387, 430, 600, 1087
HphI	GGTGA	1 cut(s)	1669
Hpy166II	GTNNAC	2 cut(s)	807, 1660
Hpy188I	TCNGA	7 cut(s)	90, 207, 256, 832, 856, 885, 1335
Hpy8I	GTNNAC	2 cut(s)	807, 1660
Hpy99I	CGWCG	4 cut(s)	94, 716, 869, 965
HpyAV	CCTTC	5 cut(s)	584, 589, 931, 1483, 1685
HpyCH4III	ACNGT	1 cut(s)	307
HpyCH4IV	ACGT	2 cut(s)	229, 963
HpyCH4V	TGCA	6 cut(s)	543, 967, 1163, 1168, 1422, 1652
HpyF10VI	GCNNNNNNNGC	6 cut(s)	169, 369, 378, 663, 1102, 1737
HpyF3I	CTNAG	5 cut(s)	35, 126, 326, 351, 1727
HpySE526I	ACGT	2 cut(s)	229, 963
KroI	GCCGGC	1 cut(s)	198
KroNI	GCCGGC	1 cut(s)	200
Ksp22I	TGATCA	2 cut(s)	1225, 1231
Kzo9I	GATC	6 cut(s)	31, 426, 498, 697, 1225, 1231
LguI	GCTCTTC	1 cut(s)	104
LmnI	GCTCC	5 cut(s)	94, 135, 142, 886, 1093
Lsp1109I	GCAGC	7 cut(s)	52, 175, 178, 181, 649, 1114, 1636
LweI	GCATC	2 cut(s)	181, 1150
MaeI	CTAG	2 cut(s)	663, 1191
MaeII	ACGT	2 cut(s)	229, 963
MaeIII	GTNAC	2 cut(s)	432, 1517
MalI	GATC	6 cut(s)	33, 428, 500, 699, 1227, 1233
MbiI	CCGCTC	1 cut(s)	478
MboI	GATC	6 cut(s)	31, 426, 498, 697, 1225, 1231
MflI	RGATCY	2 cut(s)	31, 426
MhlI	GDGCHC	2 cut(s)	99, 1022
MluCI	AATT	6 cut(s)	551, 1172, 1286, 1498, 1540, 1699
MlyI	GAGTC	9 cut(s)	79, 251, 403, 432, 778, 836, 1322, 1544, 1578
MmeI	TCCRAC	2 cut(s)	113, 984
Mph1103I	ATGCAT	1 cut(s)	1165
MroNI	GCCGGC	1 cut(s)	198
MseI	TTAA	2 cut(s)	1175, 1281
MslI	CAYNNNNRTG	2 cut(s)	191, 1233
MspI	CCGG	8 cut(s)	74, 140, 199, 264, 387, 430, 600, 1087
MspR9I	CCNGG	3 cut(s)	74, 388, 1088
Mva1269I	GAATGC	1 cut(s)	1277
MwoI	GCNNNNNNNGC	6 cut(s)	169, 369, 378, 663, 1102, 1737
NaeI	GCCGGC	1 cut(s)	200
NciI	CCSGG	3 cut(s)	74, 388, 1088
NdeII	GATC	6 cut(s)	31, 426, 498, 697, 1225, 1231
NgoMIV	GCCGGC	1 cut(s)	198
NlaIV	GGNNCC	1 cut(s)	385
NmeAIII	GCCGAG	3 cut(s)	239, 348, 423
NmuCI	GTSAC	1 cut(s)	432
NsiI	ATGCAT	1 cut(s)	1165
NspI	RCATGY	1 cut(s)	1584
NspV	TTCGAA	1 cut(s)	555
PaeR7I	CTCGAG	1 cut(s)	493
PagI	TCATGA	7 cut(s)	45, 186, 238, 1195, 1228, 1234, 1597
PceI	AGGCCT	1 cut(s)	124
PciI	ACATGT	1 cut(s)	1580
PciSI	GCTCTTC	1 cut(s)	104
PctI	GAATGC	1 cut(s)	1277
PdiI	GCCGGC	1 cut(s)	200
PfeI	GAWTC	3 cut(s)	235, 627, 1291
PfoI	TCCNGGA	1 cut(s)	386
PleI	GAGTC	9 cut(s)	79, 251, 403, 432, 777, 836, 1321, 1543, 1577
PmaCI	CACGTG	1 cut(s)	230
PmlI	CACGTG	1 cut(s)	230
PpsI	GAGTC	9 cut(s)	79, 251, 403, 432, 777, 836, 1321, 1543, 1577
Ppu21I	YACGTR	1 cut(s)	230
PscI	ACATGT	1 cut(s)	1580
Psp124BI	GAGCTC	1 cut(s)	99
PspCI	CACGTG	1 cut(s)	230
PspN4I	GGNNCC	1 cut(s)	385
PspPI	GGNCC	5 cut(s)	142, 196, 384, 473, 1084
PsrI	GAACNNNNNNTAC	2 cut(s)	1600, 1632
PstI	CTGCAG	1 cut(s)	1654
PsuI	RGATCY	2 cut(s)	31, 426
RsaI	GTAC	3 cut(s)	295, 1189, 1327
RsaNI	GTAC	3 cut(s)	294, 1188, 1326
RseI	CAYNNNNRTG	2 cut(s)	191, 1233
SacI	GAGCTC	1 cut(s)	99
SapI	GCTCTTC	1 cut(s)	104
SaqAI	TTAA	2 cut(s)	1175, 1281
Sau3AI	GATC	6 cut(s)	31, 426, 498, 697, 1225, 1231
Sau96I	GGNCC	5 cut(s)	142, 196, 384, 473, 1084
ScaI	AGTACT	2 cut(s)	1189, 1327
SchI	GAGTC	9 cut(s)	79, 251, 403, 432, 778, 836, 1322, 1544, 1578
ScrFI	CCNGG	3 cut(s)	74, 388, 1088
SduI	GDGCHC	2 cut(s)	99, 1022
SfaNI	GCATC	2 cut(s)	181, 1150
SfcI	CTRYAG	2 cut(s)	622, 1650
Sfr274I	CTCGAG	1 cut(s)	493
SfuI	TTCGAA	1 cut(s)	555
SinI	GGWCC	1 cut(s)	384
SlaI	CTCGAG	1 cut(s)	493
SmiMI	CAYNNNNRTG	2 cut(s)	191, 1233
SmlI	CTYRAG	3 cut(s)	493, 902, 1025
SmoI	CTYRAG	3 cut(s)	493, 902, 1025
SpeI	ACTAGT	1 cut(s)	1190
Sse9I	AATT	6 cut(s)	551, 1172, 1286, 1498, 1540, 1699
SseBI	AGGCCT	1 cut(s)	124
SspMI	CTAG	2 cut(s)	663, 1191
SstI	GAGCTC	1 cut(s)	99
StuI	AGGCCT	1 cut(s)	124
StyD4I	CCNGG	3 cut(s)	72, 386, 1086
TaaI	ACNGT	1 cut(s)	307
TaiI	ACGT	2 cut(s)	232, 966
TaqI	TCGA	7 cut(s)	441, 494, 555, 821, 837, 960, 1316
TaqII	GACCGA	1 cut(s)	237
TasI	AATT	6 cut(s)	551, 1172, 1286, 1498, 1540, 1699
TatI	WGTACW	3 cut(s)	293, 1187, 1325
TauI	GCSGC	4 cut(s)	314, 336, 478, 1379
TfiI	GAWTC	3 cut(s)	235, 627, 1291
Tru1I	TTAA	2 cut(s)	1175, 1281
Tru9I	TTAA	2 cut(s)	1175, 1281
TscAI	CASTG	3 cut(s)	334, 877, 1659
TseFI	GTSAC	1 cut(s)	432
TseI	GCWGC	7 cut(s)	40, 163, 166, 169, 637, 1102, 1649
Tsp45I	GTSAC	1 cut(s)	432
TspDTI	ATGAA	8 cut(s)	62, 227, 501, 909, 923, 1212, 1604, 1614
TspGWI	ACGGA	3 cut(s)	66, 107, 1283
TspRI	CASTG	3 cut(s)	334, 877, 1659
VpaK11BI	GGWCC	1 cut(s)	384
XapI	RAATTY	2 cut(s)	551, 1540
XceI	RCATGY	1 cut(s)	1584
XcmI	CCANNNNNNNNNTGG	1 cut(s)	883
XhoI	CTCGAG	1 cut(s)	493
XspI	CTAG	2 cut(s)	663, 1191
ZrmI	AGTACT	2 cut(s)	1189, 1327
Zsp2I	ATGCAT	1 cut(s)	1165

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.