Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr3B

Orthogroup ID

OG0002927

Physical Location & Seq

Genomic Coordinates Reverse (-)

17938864 .. 17941229

Gene Structure 2366 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh3BG201200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1770 bp

ATGGAAATGGAAGACCAGTATGGTTTAGGAGATCTCAGGCAGCTCATGAACGGAACTGGTAGGTCTCACTTCCCGGCCATCCAGACTCCGACGGAGCTCTTCCCCAGTAGCCACCACCATAGGCCTCAGCTCCTCGCTCCGGCCCATCATCATCATCATCATCATCATCAGCATCAGCAGCAGCAGCAGCATCCCTACGAAATCATGATGATGGGCCGGCTTCAGACCTCCCACGACATCATACCACGTGGGATTCATGAGTTTCGGTCTGCTGACTCGGCCGGTGGTTGTGGTGGTGGTGGTGGTGCTTGTACTAATAATACTGTTGCGGCTACTTCTTCTCTCAGTGGCGGCGGTGGTCTGGAGGCTGAGGGCGGAGGCTGTCTCGGCGGTGATGGCGGGTCCGGGAGGTGGCCGAGGCAAGAGACTCTCACGCTTCTGGAGATCCGGTCACGACTCGATTACAAGTTCAAAGAGGCTAATCAAAAAGGGCCGCTCTGGGATGAAGTCTCTAGGATCATGTGTGAGGAACATGGGTATCAAAGAAGCGGAAAAAAATGCAGGGAAAAATTCGAAAACTTATACAAGTATTACAAGAAGACAAAGGAAGGGAAGGCCGGAAGACAAGATGGAAAGCACTATAGATTCTTTCGGCAGCTTGAAGCTCTCTATGGCGAAACTAGCAACAACATTGCCGTCTCATCACTCCCACCAGATCAATCCCATTTCGTCGGTAATAATAATATCAATAACAATAATAATACTTTTCGTTATCAAGCTCAACCGAGTCATCAAGATACTACTACCGCTACTACTTATCAGTCCACTCAAAGCGTCTCGAACTCTTCCGATTTCGAGGACTCGTCTTCCTCGGAGGACAACGACGGCAGTGCCATTGCTCCGATGGACGATGAAGTGCTTGAGATGAAGAGGACGAGGAAGAGGAGGGGATGGAAGGTAAAGATAAAGGAGTTTATCGACGTGCAAATGAGGAAGATGATGGAGAAGCAAGAGGAGTGGTTGGAGAAGCTGATGGGCACGCTTGAGCAGAAAGAAAGGGAGAGGGTGTTGAGAGAGGAAGAGTGGCGAAAACAAGAGGCGGGCCGGGTGGAGCGAGAGCAGCAGTTTTGGGCTAAAGAGAGAGCTTGGATTGAAGCAAGGGATAAAGCTCTCATGGATGCATTGCAGAAATTAACAGGAAGTAGTACTAGTCATGAAGTAAAGACTTCTTCTTCAACCCCTGATCATGATCATGAGGATATTGTGAGTGAGCAAGAGACATGGCCGGAATGCGAGATTAACAAATTGATTCAGTTGAGAGGAAGCATGGAGTCGAGGTTTAGTACTAGTCAGAGAGGTGGGTGTGTGGAGGAAAGACTTTGGGAGGAGATAGCGGCGAAGATGAGTTGTTTGGGATATGAAAGGAGTGGAATGGTCTGCAAGGAGAAATGGGAGAGCATAAACTATGTGAGGAAGTGTTCCAAAGAGTTGTTCAGTAAGAAGAGGAAGGAGAACAATTCAAGGTCAAGCTCTTGTTACTTTGGGAACAATGAGTCAAATTCCTCATTGTATAGTAGTCAAGGAGGAGTCTATGCTACATGTGAAATGAATAATCATGAACAAGGTAATGGTGGTTCTCCCTCTAATAATCCAAATGTAGGCAATGCTGCAGTGGTGAACGACACTTGTTTTCCATTTTTGATGGGCGAAGGAGACAATTTGTGGGAGAACTACGGGTTGAAGCTCAGCAAGGGTAGCCAAAACCAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0007275 GO:0007389 GO:0008150 GO:0009653 GO:0009791 GO:0009798 GO:0009889 GO:0009908 GO:0009909 GO:0010016 GO:0010033 GO:0010200 GO:0010243 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0022414 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0040008 GO:0042221 GO:0042493 GO:0042802 GO:0042803 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0045926 GO:0046620 GO:0046621 GO:0046983 GO:0048367 GO:0048437 GO:0048438 GO:0048439 GO:0048441 GO:0048442 GO:0048444 GO:0048446 GO:0048464 GO:0048465 GO:0048498 GO:0048519 GO:0048559 GO:0048560 GO:0048580 GO:0048608 GO:0048638 GO:0048640 GO:0048731 GO:0048827 GO:0048831 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051093 GO:0051171 GO:0051239 GO:0051241 GO:0051252 GO:0060255 GO:0061458 GO:0065007 GO:0080090 GO:0090428 GO:0090567 GO:0090696 GO:0090697 GO:0090698 GO:0090707 GO:0097159 GO:0099402 GO:0140110 GO:1901363 GO:1901698 GO:1901700 GO:1903506 GO:1905392 GO:2000026 GO:2000112 GO:2000241 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Myb_DNA-bind_4

Protein Analysis

589

Amino Acids

66.85

Weight (kDa)

6.34

Isoelectric Point (pI)

53.86

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Myb_DNA-bind_4	PF13837	137 - 223	4.9e-21	Myb/SANT-like DNA-binding domain
Myb_DNA-bind_4	PF13837	427 - 503	1e-12	Myb/SANT-like DNA-binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002927)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G10000 AT3G10000 AT5G03680
fragaria_vesca	FvH4_6g17990 FvH4_6g17990 FvH4_7g05970
malus_domestica	MD02G1247700.v1.1 MD07G1068800.v1.1 MD12G1018900.v1.1 MD14G1016900.v1.1
prunus_persica	Prupe.2G086500_v2.0.a1 Prupe.7G116400_v2.0.a1
pyrus_communis	pycom02g21160 pycom07g05290 pycom12g01570 pycom14g01450
rosa_chinensis	RchiOBHm_Chr1g0333231 RchiOBHm_Chr3g0472271
rosa_laevigata	RLG00000024094 RLG00000029619
rosa_multiflora	Rmu_sc0001214.1_g000051 Rmu_sc0008192.1_g000003
rosa_roxburghii	Rroxscaffold_4G00317680 Rroxscaffold_6G00409120
rosa_rugosa	Rorug01G0108100 Rorug03G0123400
rosa_samantha	Rh1AG131100 Rh1BG100500 Rh1CG125000 Rh1DG136500 Rh3AG175700 Rh3BG201200 Rh3CG192500 Rh3CG199600 Rh3CG199700 Rh3DG173800
rosa_wichuraiana	Rw1G010840 Rw3G016550

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccBSI	CCGCTC	1 cut(s)	496
AclWI	GGATC	2 cut(s)	439, 524
AcoI	YGGCCR	4 cut(s)	75, 279, 413, 1283
AcsI	RAATTY	2 cut(s)	569, 1558
AcuI	CTGAAG	1 cut(s)	206
AcvI	CACGTG	1 cut(s)	248
AfaI	GTAC	3 cut(s)	313, 1207, 1345
AfiI	CCNNNNNNNGG	3 cut(s)	139, 411, 1658
AflIII	ACRYGT	1 cut(s)	1598
AgsI	TTSAA	6 cut(s)	472, 662, 1154, 1236, 1521, 1741
AhlI	ACTAGT	2 cut(s)	1208, 1346
AjiI	CACGTC	1 cut(s)	982
AjuI	GAANNNNNNNTTGG	2 cut(s)	1475, 1507
Alw21I	GWGCWC	1 cut(s)	99
Alw26I	GTCTC	8 cut(s)	69, 389, 419, 514, 703, 841, 1271, 1707
AlwI	GGATC	2 cut(s)	439, 524
ApeKI	GCWGC	8 cut(s)	40, 178, 181, 184, 187, 655, 1120, 1667
ApoI	RAATTY	2 cut(s)	569, 1558
AspS9I	GGNCC	5 cut(s)	142, 214, 402, 491, 1102
AsuC2I	CCSGG	3 cut(s)	74, 406, 1106
AsuHPI	GGTGA	2 cut(s)	404, 1687
AsuII	TTCGAA	1 cut(s)	573
AvaII	GGWCC	1 cut(s)	402
BaeGI	GKGCMC	1 cut(s)	1040
BaeI	ACNNNNGTAYC	2 cut(s)	521, 554
BanII	GRGCYC	1 cut(s)	99
BbrPI	CACGTG	1 cut(s)	248
BbsI	GAAGAC	4 cut(s)	18, 605, 628, 858
Bbv12I	GWGCWC	1 cut(s)	99
BbvCI	CCTCAGC	2 cut(s)	126, 369
BbvI	GCAGC	8 cut(s)	52, 190, 193, 196, 199, 667, 1132, 1654
BceAI	ACGGC	2 cut(s)	680, 901
BcgI	CGANNNNNNTGC	2 cut(s)	872, 906
BclI	TGATCA	2 cut(s)	1243, 1249
BcnI	CCSGG	3 cut(s)	74, 406, 1106
BcoDI	GTCTC	8 cut(s)	69, 389, 419, 514, 703, 841, 1271, 1707
BcuI	ACTAGT	2 cut(s)	1208, 1346
BfaI	CTAG	4 cut(s)	513, 681, 1209, 1347
BfmI	CTRYAG	2 cut(s)	640, 1668
BglII	AGATCT	1 cut(s)	31
BlpI	GCTNAGC	1 cut(s)	1745
BmcAI	AGTACT	2 cut(s)	1207, 1345
Bme1390I	CCNGG	3 cut(s)	74, 406, 1106
Bme18I	GGWCC	1 cut(s)	402
BmgBI	CACGTC	1 cut(s)	982
BmgT120I	GGNCC	5 cut(s)	142, 214, 402, 491, 1102
BmiI	GGNNCC	1 cut(s)	403
BmrFI	CCNGG	3 cut(s)	74, 406, 1106
BmrI	ACTGGG	1 cut(s)	99
BmsI	GCATC	3 cut(s)	181, 199, 1168
BmuI	ACTGGG	1 cut(s)	99
BpiI	GAAGAC	4 cut(s)	18, 605, 628, 858
BplI	GAGNNNNNCTC	2 cut(s)	369, 401
BpmI	CTGGAG	2 cut(s)	383, 461
Bpu10I	CCTNAGC	2 cut(s)	126, 369
Bpu1102I	GCTNAGC	1 cut(s)	1745
Bpu14I	TTCGAA	1 cut(s)	573
BpuEI	CTTGAG	2 cut(s)	941, 1064
BpuMI	CCSGG	3 cut(s)	74, 406, 1106
BsaAI	YACGTR	1 cut(s)	248
BsaBI	GATNNNNATC	1 cut(s)	1248
BsaI	GGTCTC	1 cut(s)	69
BsaJI	CCNNGG	2 cut(s)	416, 870
BsaWI	WCCGGW	1 cut(s)	447
BsaXI	ACNNNNNCTCC	6 cut(s)	434, 464, 1052, 1082, 1322, 1352
Bsc4I	CCNNNNNNNGG	3 cut(s)	139, 411, 1658
Bse118I	RCCGGY	2 cut(s)	216, 281
Bse1I	ACTGG	4 cut(s)	16, 61, 105, 1765
Bse3DI	GCAATG	4 cut(s)	690, 894, 1181, 1669
Bse8I	GATNNNNATC	1 cut(s)	1248
BseDI	CCNNGG	2 cut(s)	416, 870
BseGI	GGATG	5 cut(s)	78, 190, 508, 956, 1183
BseJI	GATNNNNATC	1 cut(s)	1248
BseLI	CCNNNNNNNGG	3 cut(s)	139, 411, 1658
BseMI	GCAATG	4 cut(s)	690, 894, 1181, 1669
BseMII	CTCAG	5 cut(s)	49, 140, 358, 360, 1759
BseNI	ACTGG	4 cut(s)	16, 61, 105, 1765
BseRI	GAGGAG	5 cut(s)	122, 958, 1028, 1400, 1599
BseSI	GKGCMC	1 cut(s)	1040
BseX3I	CGGCCG	1 cut(s)	279
BseXI	GCAGC	8 cut(s)	52, 190, 193, 196, 199, 667, 1132, 1654
Bsh1285I	CGRYCG	1 cut(s)	282
BsiEI	CGRYCG	1 cut(s)	282
BsiHKAI	GWGCWC	1 cut(s)	99
BsiSI	CCGG	9 cut(s)	74, 140, 217, 282, 405, 448, 618, 1105, 1286
BslI	CCNNNNNNNGG	3 cut(s)	139, 411, 1658
BsmAI	GTCTC	8 cut(s)	69, 389, 419, 514, 703, 841, 1271, 1707
BsmBI	CGTCTC	2 cut(s)	703, 841
BsmI	GAATGC	1 cut(s)	1295
Bso31I	GGTCTC	1 cut(s)	69
Bsp119I	TTCGAA	1 cut(s)	573
Bsp1286I	GDGCHC	2 cut(s)	99, 1040
Bsp143I	GATC	6 cut(s)	31, 444, 516, 715, 1243, 1249
Bsp1720I	GCTNAGC	1 cut(s)	1745
BspCNI	CTCAG	5 cut(s)	48, 139, 357, 361, 1758
BspHI	TCATGA	7 cut(s)	45, 204, 256, 1213, 1246, 1252, 1615
BspLI	GGNNCC	1 cut(s)	403
BspMAI	CTGCAG	1 cut(s)	1672
BspPI	GGATC	2 cut(s)	439, 524
BspQI	GCTCTTC	1 cut(s)	104
BspT104I	TTCGAA	1 cut(s)	573
BspTNI	GGTCTC	1 cut(s)	69
BsrBI	CCGCTC	1 cut(s)	496
BsrDI	GCAATG	4 cut(s)	690, 894, 1181, 1669
BsrFI	RCCGGY	2 cut(s)	216, 281
BsrI	ACTGG	4 cut(s)	16, 61, 105, 1765
BssAI	RCCGGY	2 cut(s)	216, 281
BssECI	CCNNGG	2 cut(s)	416, 870
BssMI	GATC	6 cut(s)	31, 444, 516, 715, 1243, 1249
Bst4CI	ACNGT	1 cut(s)	325
Bst6I	CTCTTC	6 cut(s)	104, 850, 923, 935, 1074, 1496
BstBAI	YACGTR	1 cut(s)	248
BstBI	TTCGAA	1 cut(s)	573
BstC8I	GCNNGC	3 cut(s)	218, 1040, 1102
BstDEI	CTNAG	5 cut(s)	35, 126, 344, 369, 1745
BstF5I	GGATG	5 cut(s)	78, 190, 508, 956, 1183
BstKTI	GATC	6 cut(s)	34, 447, 519, 718, 1246, 1252
BstMAI	GTCTC	8 cut(s)	69, 389, 419, 514, 703, 841, 1271, 1707
BstMBI	GATC	6 cut(s)	31, 444, 516, 715, 1243, 1249
BstMCI	CGRYCG	1 cut(s)	282
BstMWI	GCNNNNNNNGC	9 cut(s)	178, 184, 187, 278, 387, 396, 681, 1120, 1755
BstNSI	RCATGY	1 cut(s)	1602
BstSCI	CCNGG	3 cut(s)	72, 404, 1104
BstSFI	CTRYAG	2 cut(s)	640, 1668
BstSLI	GKGCMC	1 cut(s)	1040
BstV1I	GCAGC	8 cut(s)	52, 190, 193, 196, 199, 667, 1132, 1654
BstV2I	GAAGAC	4 cut(s)	18, 605, 628, 858
BstX2I	RGATCY	2 cut(s)	31, 444
BstYI	RGATCY	2 cut(s)	31, 444
BstZI	CGGCCG	1 cut(s)	279
BtrI	CACGTC	1 cut(s)	982
BtsCI	GGATG	5 cut(s)	78, 190, 508, 956, 1183
BtsI	GCAGTG	2 cut(s)	895, 1677
BtsIMutI	CAGTG	3 cut(s)	352, 895, 1677
Cac8I	GCNNGC	3 cut(s)	218, 1040, 1102
CciI	TCATGA	7 cut(s)	45, 204, 256, 1213, 1246, 1252, 1615
Cfr10I	RCCGGY	2 cut(s)	216, 281
Cfr13I	GGNCC	5 cut(s)	142, 214, 402, 491, 1102
CseI	GACGC	1 cut(s)	823
Csp6I	GTAC	3 cut(s)	312, 1206, 1344
CspCI	CAANNNNNGTGG	2 cut(s)	998, 1033
CviQI	GTAC	3 cut(s)	312, 1206, 1344
DdeI	CTNAG	5 cut(s)	35, 126, 344, 369, 1745
DpnI	GATC	6 cut(s)	33, 446, 518, 717, 1245, 1251
DpnII	GATC	6 cut(s)	31, 444, 516, 715, 1243, 1249
EaeI	YGGCCR	4 cut(s)	75, 279, 413, 1283
EagI	CGGCCG	1 cut(s)	279
Eam1104I	CTCTTC	6 cut(s)	104, 850, 923, 935, 1074, 1496
EarI	CTCTTC	6 cut(s)	104, 850, 923, 935, 1074, 1496
EciI	GGCGGA	1 cut(s)	390
Ecl136II	GAGCTC	1 cut(s)	97
EclXI	CGGCCG	1 cut(s)	279
Eco147I	AGGCCT	1 cut(s)	124
Eco24I	GRGCYC	1 cut(s)	99
Eco31I	GGTCTC	1 cut(s)	69
Eco47I	GGWCC	1 cut(s)	402
Eco52I	CGGCCG	1 cut(s)	279
Eco53kI	GAGCTC	1 cut(s)	97
Eco57I	CTGAAG	1 cut(s)	206
Eco72I	CACGTG	1 cut(s)	248
EcoICRI	GAGCTC	1 cut(s)	97
EcoT22I	ATGCAT	1 cut(s)	1183
EcoT38I	GRGCYC	1 cut(s)	99
Esp3I	CGTCTC	2 cut(s)	703, 841
FauI	CCCGC	2 cut(s)	392, 1093
FbaI	TGATCA	2 cut(s)	1243, 1249
FokI	GGATG	5 cut(s)	65, 177, 515, 963, 1190
FriOI	GRGCYC	1 cut(s)	99
FspBI	CTAG	4 cut(s)	513, 681, 1209, 1347
GsuI	CTGGAG	2 cut(s)	383, 461
HapII	CCGG	9 cut(s)	74, 140, 217, 282, 405, 448, 618, 1105, 1286
HgaI	GACGC	1 cut(s)	823
HpaII	CCGG	9 cut(s)	74, 140, 217, 282, 405, 448, 618, 1105, 1286
HphI	GGTGA	2 cut(s)	404, 1687
Hpy166II	GTNNAC	2 cut(s)	825, 1678
Hpy188I	TCNGA	6 cut(s)	90, 225, 850, 874, 903, 1353
Hpy8I	GTNNAC	2 cut(s)	825, 1678
Hpy99I	CGWCG	4 cut(s)	94, 734, 887, 983
HpyAV	CCTTC	5 cut(s)	602, 607, 949, 1501, 1703
HpyCH4III	ACNGT	1 cut(s)	325
HpyCH4IV	ACGT	2 cut(s)	247, 981
HpyCH4V	TGCA	6 cut(s)	561, 985, 1181, 1186, 1440, 1670
HpyF10VI	GCNNNNNNNGC	9 cut(s)	178, 184, 187, 278, 387, 396, 681, 1120, 1755
HpyF3I	CTNAG	5 cut(s)	35, 126, 344, 369, 1745
HpySE526I	ACGT	2 cut(s)	247, 981
KroI	GCCGGC	1 cut(s)	216
KroNI	GCCGGC	1 cut(s)	218
Ksp22I	TGATCA	2 cut(s)	1243, 1249
Kzo9I	GATC	6 cut(s)	31, 444, 516, 715, 1243, 1249
LguI	GCTCTTC	1 cut(s)	104
LmnI	GCTCC	5 cut(s)	94, 135, 142, 904, 1111
Lsp1109I	GCAGC	8 cut(s)	52, 190, 193, 196, 199, 667, 1132, 1654
LweI	GCATC	3 cut(s)	181, 199, 1168
MaeI	CTAG	4 cut(s)	513, 681, 1209, 1347
MaeII	ACGT	2 cut(s)	247, 981
MaeIII	GTNAC	2 cut(s)	450, 1535
MalI	GATC	6 cut(s)	33, 446, 518, 717, 1245, 1251
MbiI	CCGCTC	1 cut(s)	496
MboI	GATC	6 cut(s)	31, 444, 516, 715, 1243, 1249
MflI	RGATCY	2 cut(s)	31, 444
MhlI	GDGCHC	2 cut(s)	99, 1040
MluCI	AATT	6 cut(s)	569, 1190, 1304, 1516, 1558, 1717
MlyI	GAGTC	9 cut(s)	79, 269, 421, 450, 796, 854, 1340, 1562, 1596
MmeI	TCCRAC	2 cut(s)	113, 1002
Mph1103I	ATGCAT	1 cut(s)	1183
MroNI	GCCGGC	1 cut(s)	216
MseI	TTAA	2 cut(s)	1193, 1299
MslI	CAYNNNNRTG	2 cut(s)	209, 1251
MspI	CCGG	9 cut(s)	74, 140, 217, 282, 405, 448, 618, 1105, 1286
MspR9I	CCNGG	3 cut(s)	74, 406, 1106
Mva1269I	GAATGC	1 cut(s)	1295
MwoI	GCNNNNNNNGC	9 cut(s)	178, 184, 187, 278, 387, 396, 681, 1120, 1755
NaeI	GCCGGC	1 cut(s)	218
NciI	CCSGG	3 cut(s)	74, 406, 1106
NdeII	GATC	6 cut(s)	31, 444, 516, 715, 1243, 1249
NgoMIV	GCCGGC	1 cut(s)	216
NlaIV	GGNNCC	1 cut(s)	403
NmeAIII	GCCGAG	3 cut(s)	257, 366, 441
NmuCI	GTSAC	1 cut(s)	450
NsiI	ATGCAT	1 cut(s)	1183
NspI	RCATGY	1 cut(s)	1602
NspV	TTCGAA	1 cut(s)	573
PagI	TCATGA	7 cut(s)	45, 204, 256, 1213, 1246, 1252, 1615
PceI	AGGCCT	1 cut(s)	124
PciI	ACATGT	1 cut(s)	1598
PciSI	GCTCTTC	1 cut(s)	104
PctI	GAATGC	1 cut(s)	1295
PdiI	GCCGGC	1 cut(s)	218
PfeI	GAWTC	3 cut(s)	253, 645, 1309
PfoI	TCCNGGA	1 cut(s)	404
PleI	GAGTC	9 cut(s)	79, 269, 421, 450, 795, 854, 1339, 1561, 1595
PmaCI	CACGTG	1 cut(s)	248
PmlI	CACGTG	1 cut(s)	248
PpsI	GAGTC	9 cut(s)	79, 269, 421, 450, 795, 854, 1339, 1561, 1595
Ppu21I	YACGTR	1 cut(s)	248
PscI	ACATGT	1 cut(s)	1598
Psp124BI	GAGCTC	1 cut(s)	99
PspCI	CACGTG	1 cut(s)	248
PspN4I	GGNNCC	1 cut(s)	403
PspPI	GGNCC	5 cut(s)	142, 214, 402, 491, 1102
PsrI	GAACNNNNNNTAC	2 cut(s)	1618, 1650
PstI	CTGCAG	1 cut(s)	1672
PsuI	RGATCY	2 cut(s)	31, 444
RsaI	GTAC	3 cut(s)	313, 1207, 1345
RsaNI	GTAC	3 cut(s)	312, 1206, 1344
RseI	CAYNNNNRTG	2 cut(s)	209, 1251
SacI	GAGCTC	1 cut(s)	99
SapI	GCTCTTC	1 cut(s)	104
SaqAI	TTAA	2 cut(s)	1193, 1299
Sau3AI	GATC	6 cut(s)	31, 444, 516, 715, 1243, 1249
Sau96I	GGNCC	5 cut(s)	142, 214, 402, 491, 1102
ScaI	AGTACT	2 cut(s)	1207, 1345
SchI	GAGTC	9 cut(s)	79, 269, 421, 450, 796, 854, 1340, 1562, 1596
ScrFI	CCNGG	3 cut(s)	74, 406, 1106
SduI	GDGCHC	2 cut(s)	99, 1040
SfaNI	GCATC	3 cut(s)	181, 199, 1168
SfcI	CTRYAG	2 cut(s)	640, 1668
SfuI	TTCGAA	1 cut(s)	573
SinI	GGWCC	1 cut(s)	402
SmiMI	CAYNNNNRTG	2 cut(s)	209, 1251
SmlI	CTYRAG	2 cut(s)	920, 1043
SmoI	CTYRAG	2 cut(s)	920, 1043
SpeI	ACTAGT	2 cut(s)	1208, 1346
Sse9I	AATT	6 cut(s)	569, 1190, 1304, 1516, 1558, 1717
SseBI	AGGCCT	1 cut(s)	124
SspMI	CTAG	4 cut(s)	513, 681, 1209, 1347
SstI	GAGCTC	1 cut(s)	99
StuI	AGGCCT	1 cut(s)	124
StyD4I	CCNGG	3 cut(s)	72, 404, 1104
TaaI	ACNGT	1 cut(s)	325
TaiI	ACGT	2 cut(s)	250, 984
TaqI	TCGA	6 cut(s)	459, 573, 839, 855, 978, 1334
TaqII	GACCGA	1 cut(s)	255
TasI	AATT	6 cut(s)	569, 1190, 1304, 1516, 1558, 1717
TatI	WGTACW	3 cut(s)	311, 1205, 1343
TauI	GCSGC	4 cut(s)	332, 354, 496, 1397
TfiI	GAWTC	3 cut(s)	253, 645, 1309
Tru1I	TTAA	2 cut(s)	1193, 1299
Tru9I	TTAA	2 cut(s)	1193, 1299
TscAI	CASTG	3 cut(s)	352, 895, 1677
TseFI	GTSAC	1 cut(s)	450
TseI	GCWGC	8 cut(s)	40, 178, 181, 184, 187, 655, 1120, 1667
Tsp45I	GTSAC	1 cut(s)	450
TspDTI	ATGAA	9 cut(s)	62, 245, 519, 927, 941, 1230, 1434, 1622, 1632
TspGWI	ACGGA	2 cut(s)	66, 107
TspRI	CASTG	3 cut(s)	352, 895, 1677
VpaK11BI	GGWCC	1 cut(s)	402
XapI	RAATTY	2 cut(s)	569, 1558
XceI	RCATGY	1 cut(s)	1602
XcmI	CCANNNNNNNNNTGG	1 cut(s)	901
XspI	CTAG	4 cut(s)	513, 681, 1209, 1347
ZrmI	AGTACT	2 cut(s)	1207, 1345
Zsp2I	ATGCAT	1 cut(s)	1183

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.